Index

A | B | C | D | E | F | G | L | M | N | O | P | R | S | T | V | W

A

Amplicon (class in pydna.amplify)
Anneal (class in pydna.amplify)

B

basictm() (in module pydna.amplify)

C

circular (pydna.dsdna.Dseq attribute)
(pydna.dsdna.Dseqrecord attribute)
circular_assembly() (in module pydna.assembly)
cloning_primers() (in module pydna.primer_design)
copy_features() (in module pydna.utils)
cut() (pydna.dsdna.Dseq method)
(pydna.dsdna.Dseqrecord method)

D

detailed_figure() (pydna.amplify.Amplicon method)
Dseq (class in pydna.dsdna)
Dseqrecord (class in pydna.dsdna)

E

Editor (class in pydna.editor)
eq() (in module pydna.utils)

F

featured_template() (pydna.amplify.Anneal method)
fig() (pydna.dsdna.Dseq method)
fill_in() (pydna.dsdna.Dseq method)
find() (pydna.dsdna.Dseq method)
five_prime_end() (pydna.dsdna.Dseq method)
flankdn() (pydna.amplify.Amplicon method)
flankup() (pydna.amplify.Amplicon method)
format() (pydna.dsdna.Dseqrecord method)
fusion_pcr_assembly() (in module pydna.assembly2)

G

Genbank (class in pydna.download)
gibson_assembly() (in module pydna.assembly2)

L

linear (pydna.dsdna.Dseq attribute)
(pydna.dsdna.Dseqrecord attribute)
linear_assembly() (in module pydna.assembly)
looped() (pydna.dsdna.Dseq method)
(pydna.dsdna.Dseqrecord method)

M

mung() (pydna.dsdna.Dseq method)

N

nucleotide() (pydna.download.Genbank method)

O

open() (pydna.editor.Editor method)
ovhg (pydna.dsdna.Dseq attribute)

P

parse() (in module pydna.dsdna)
pcr() (in module pydna.amplify)
pcr_product() (pydna.amplify.Amplicon method)
pcr_program() (pydna.amplify.Amplicon method)
products() (pydna.amplify.Anneal method)
pydna.amplify (module)
pydna.assembly (module)
pydna.assembly2 (module)
pydna.download (module)
pydna.dsdna (module)
pydna.editor (module)
pydna.primer_design (module)
pydna.utils (module)

R

rc() (in module pydna.dsdna)
(pydna.dsdna.Dseq method)
(pydna.dsdna.Dseqrecord method)
read() (in module pydna.dsdna)
recombination_assembly() (in module pydna.assembly2)
report() (pydna.amplify.Anneal method)
reverse_complement() (pydna.dsdna.Dseq method)
(pydna.dsdna.Dseqrecord method)

S

seguid() (pydna.dsdna.Dseqrecord method)
shift_origin() (in module pydna.utils)
shifted() (pydna.dsdna.Dseqrecord method)
stamp() (pydna.dsdna.Dseqrecord method)
sync() (in module pydna.utils)
synced() (pydna.dsdna.Dseqrecord method)

T

t4() (pydna.dsdna.Dseq method)
T4() (pydna.dsdna.Dseq method)
test() (pydna.download.Genbank method)
three_prime_end() (pydna.dsdna.Dseq method)
tmbreslauer86() (in module pydna.amplify)
tmbresluc() (in module pydna.amplify)
tmstaluc98() (in module pydna.amplify)
tolinear() (pydna.dsdna.Dseq method)
(pydna.dsdna.Dseqrecord method)

V

verify_stamp() (pydna.dsdna.Dseqrecord method)

W

write() (pydna.dsdna.Dseqrecord method)