#-------------------------------------------------------------------------------
# pyvale specific ignores

# Environments and VS Code
.vscode/
.pyvale-env/
pyvale-env/
.venv/
.pytest_cache/

# Output files
*.npy
*.dat
*.png
*.svg
*.mp4
*.gif
*.tiff
*.blend
*.csv
*.json
pyvale-output/
pyvale-input/
test-output/
test-input/

# MOOSE / gmsh
*-opt
*.e
*.msh

# Keep these as they are used for examples
!src/pyvale/data/*.tiff
!src/pyvale/data/*.e
!reports/images/*.png
!reports/images/*.svg
!images/*.png
!images/*.svg
!docs/source/_static/*.png

# Keep these as they are gold output for regression tests
!tests/sensorsim/gold/*.npy
!tests/mooseherder/output_gold/*.e
!tests/mooseherder/output_gold/*.csv
!tests/mooseherder/output_gold/sim-workdir-*/*.e
!tests/mooseherder/output_gold/sim-workdir-*/*.json
!tests/mooseherder/txt_gold/*.csv
!tests/mooseherder/txt_gold/*.npy
!tests/blender/2D_gold/*.npy
!tests/blender/3D_gold/*.npy

# Image deformation test cases
*.pkl
*.dill
imdefcase*_*/
deformed_images/
src/deformed_images/

# Cython diagnostics
src/pyvale/cython/*.html

# Zig libraries
*.so
*.a
*.o

# restructured text files for API documentation.
pyvale.rst
pyvale.*.rst

# files generated by sphinx-gallery extension
docs/source/examples/*/
# keep the gallery layouts
!docs/source/examples/examples_*.rst

# doxygen folder generated when compiling docs
docs/source/doxygen

# rastercyth generated files
src/pyvale/cython/rastercyth.c
src/pyvale/cython/rastercyth.html

.ruff_cache/
.antigravitycli/
/.*/
uv.lock

#-------------------------------------------------------------------------------
# Python Standard Ignore

# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
*.py,cover
.hypothesis/
.pytest_cache/
cover/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py
db.sqlite3
db.sqlite3-journal

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
.pybuilder/
target/

# Jupyter Notebook
.ipynb_checkpoints

# IPython
profile_default/
ipython_config.py

# pyenv
#   For a library or package, you might want to ignore these files since the code is
#   intended to run in multiple environments; otherwise, check them in:
# .python-version

# pipenv
#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
#   However, in case of collaboration, if having platform-specific dependencies or dependencies
#   having no cross-platform support, pipenv may install dependencies that don't work, or not
#   install all needed dependencies.
#Pipfile.lock

# poetry
#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
#   This is especially recommended for binary packages to ensure reproducibility, and is more
#   commonly ignored for libraries.
#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
#poetry.lock

# pdm
#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
#pdm.lock
#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
#   in version control.
#   https://pdm.fming.dev/#use-with-ide
.pdm.toml

# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
__pypackages__/

# Celery stuff
celerybeat-schedule
celerybeat.pid

# SageMath parsed files
*.sage.py

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
.dmypy.json
dmypy.json

# Pyre type checker
.pyre/

# pytype static type analyzer
.pytype/

# Cython debug symbols
cython_debug/

# cmake and make scripts for developer install
CMakeCache.txt
CMakeFiles/
Makefile
cmake_install.cmake
cpp/Makefile

# PyCharm
#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
#  and can be added to the global gitignore or merged into this file.  For a more nuclear
#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
#.idea/


# files generated by sphinx-gallery extension
docs/source/examples/

# doxygen folder generated when compiling docs
docs/source/doxygen

.DS_Store
