@NX_class = NXcollection

[nabu_config]

[nabu_config.about]

[nabu_config.dataset]
binning = 1
binning_z = 1
darks_flats_dir = \None
exclude_projections = \None
flip_lr = auto
flip_ud = auto
hdf5_entry = \None
location = /tmp/pytest-of-pautran/pytest-73/test_reconstructvolume_and_con0/visitor/ma1234/id00/20251201/PROCESSED_DATA/TestEwoksTomo/TestEwoksTomo_0010/projections/TestEwoksTomo_0010.nx
nexus_version = \None
overwrite_metadata =
projections_subsampling = 1, 0

[nabu_config.output]
file_format = hdf5
file_prefix = TestEwoksTomo_0010
float_clip_values = \None
jpeg2000_compression_ratio = \None
location = /tmp/pytest-of-pautran/pytest-73/test_reconstructvolume_and_con0/visitor/ma1234/id00/20251201/PROCESSED_DATA/TestEwoksTomo/TestEwoksTomo_0010/volumes/TestEwoksTomo_0010_absorption_32Bit_hdf5
overwrite_results = True
tiff_single_file = False

[nabu_config.phase]
ctf_advanced_params = length_scale=1e-5; lim1=1e-5; lim2=0.2; normalize_by_mean=True
ctf_geometry = z1_v=None; z1_h=None; detec_pixel_size=None; magnification=True
delta_beta = 100.0
method = \None
padding_type = edge
unsharp_coeff = 0.0
unsharp_method = gaussian
unsharp_sigma = 0.0

[nabu_config.pipeline]
processing_margin = \None
resume_from_step = \None
save_steps = \None
steps_file = \None
verbosity = info

[nabu_config.postproc]
histogram_bins = 1000000
output_histogram = True

[nabu_config.preproc]
autotilt_options = \None
ccd_filter_enabled = False
ccd_filter_threshold = 0.04
detector_distortion_correction = \None
detector_distortion_correction_options = \None
dff_sigma = \None
double_flatfield = False
flat_distortion_correction_enabled = False
flat_distortion_params = tile_size=100; interpolation_kind='linear'; padding_mode='edge'; correction_spike_threshold=None
flatfield = True
flatfield_loading_mode = load_if_present
log_max_clip = 10.0
log_min_clip = 1e-06
normalize_srcurrent = True
processes_file = \None
rotate_projections_center = \None
sino_normalization = \None
sino_normalization_file =
sino_rings_correction = \None
sino_rings_options = \None
take_logarithm = True
tilt_correction = \None

[nabu_config.reconstruction]
angle_offset = 0.0
angles_file = \None
axis_correction_file = \None
centered_axis = True
clip_outer_circle = False
cor_options = side='from_file'
cor_slice = \None
crop_filtered_data = True
enable_halftomo = auto
end_x = -1
end_y = -1
end_z = -1
expand_support_factor = 1.0
fbp_filter_cutoff = 1.0
fbp_filter_type = ramlak
hbp_legs = 4
hbp_reduction_steps = 2
implementation = \None
iterations = 200
method = FBP
optim_algorithm = chambolle-pock
outer_circle_value = 0.0
padding_type = edge
positivity_constraint = True
preconditioning_filter = True
regularization_weight = 0.0
rotation_axis_position = 8.0
sample_detector_dist = \None
source_sample_dist = \None
start_x = 0
start_y = 0
start_z = 0
translation_movements_file = \None

[nabu_config.resources]
gpu_id =
gpus = 1
memory_fraction = 90.0, 1.0
method = local
num_threads = 22
workers = 1

[processing_options]

[processing_options.flatfield]
binning = 1, 1
do_flat_distortion = False
flats_srcurrent = 0.19116999999999998
method = default
normalize_srcurrent = True
projs_indices = 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
radios_srcurrent = 0.19111000000000003, 0.19108000000000003, 0.19103, 0.19099000000000002, 0.19096000000000002, 0.19091999999999998, 0.19089, 0.19085, 0.19082, 0.19077000000000002, 0.19072999999999998

[processing_options.flatfield.flat_distortion_params]
correction_spike_threshold = \None
interpolation_kind = linear
padding_mode = edge
tile_size = 100

[processing_options.histogram]
histogram_bins = 1000000

[processing_options.read_chunk]
binning = 1, 1
dataset_subsampling = 1, 0
sub_region = \None

[processing_options.reconstruction]
angles = 0.0, -0.6283185313462772, -1.2566370626925545, -1.8849555940388314, -2.513274125385109, -3.141592656731386, -3.769911188077663, -4.398229719423941, -5.026548250770218, -5.654866782116494, -6.283185313462772
axis_correction = \None
centered_axis = True
clip_outer_circle = False
cor_estimated_auto = False
crop_filtered_data = True
enable_halftomo = False
end_x = 15
end_y = 15
end_z = 15
expand_support_factor = 1.0
fbp_filter_cutoff = 1.0
fbp_filter_type = ramlak
hbp_legs = 4
hbp_reduction_steps = 2
implementation = \None
iterations = 200
method = FBP
outer_circle_value = 0.0
padding_type = edge
position = -0.11800000000000002, 0.0, 0.0
regularization_weight = 0.0
rotation_axis_position = 7.0
sample_detector_dist = \None
source_sample_dist = \None
start_x = 0
start_y = 0
start_z = 0
voxel_size_cm = 6.69e-05, 6.69e-05, 6.69e-05

[processing_options.save]
file_format = hdf5
file_prefix = TestEwoksTomo_0010
float_clip_values = \None
jpeg2000_compression_ratio = \None
location = /tmp/pytest-of-pautran/pytest-73/test_reconstructvolume_and_con0/visitor/ma1234/id00/20251201/PROCESSED_DATA/TestEwoksTomo/TestEwoksTomo_0010/volumes/TestEwoksTomo_0010_absorption_32Bit_hdf5
overwrite = True
overwrite_results = True
tiff_single_file = False

[processing_options.take_log]
log_max_clip = 10.0
log_min_clip = 1e-06

[reconstruction_stages]
((0, 11), (0, 16), (0, 16)) = TestEwoksTomo_0010/TestEwoksTomo_0010_00000.hdf5
