pirl_trufflepig-1.2.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
trufflepig/__init__.py,sha256=L5c6g7Q9ug9b2gyK9tPrhiZ6DWF6bVfy9NTNUHd5KpI,669
trufflepig/_data.py,sha256=dM_HzJiWiUNYO12PooXygjHQwWo3g6WIwMfCWuzpJO4,500
trufflepig/aggregate_gene_expression.py,sha256=qSB42LbGQp84s_EHIQgbrZabxVjA2T4OzVSBOFnFZCc,7667
trufflepig/alteration_effects.py,sha256=DscTkNtulPaH3GzRAJ8WTpAINx4VPf6JfP1osO0mVQU,9192
trufflepig/alterations.py,sha256=3SGJoW7D5vzk1PgN1AtyC_Jt4TpPCkE6Ej2o-Q7zCjI,11826
trufflepig/brief.py,sha256=dE0tmOtoAOY5UkNVJzC-CZF9QgRrDfOa1YwEfwFSz_Y,95350
trufflepig/cli.py,sha256=b16FoPv0rNmt-Vk3Ubala6nQ5wCCn9IfRZp51a3xagw,12781
trufflepig/cohort_deconvolve.py,sha256=o_0Xhh6VTlg03u6qEl4apIvQfVSGrJ3K92fKoph6buQ,13073
trufflepig/common.py,sha256=jp53X322mM4gJS0a5TenT58VPMxToBs8DsD5lskWTXI,4573
trufflepig/confidence.py,sha256=dm5wI_4qMLx7-KY3ubhlu2Ig9bDwolu3EIIaEiwuRbk,17609
trufflepig/degenerate_subtype.py,sha256=A53zWzHGvPDR54fKPI7kVSTeHXsTmd-8icULk1von5Q,14425
trufflepig/disease_state_rules.py,sha256=OneVZZtg6St3L-KsOL1ipexhBCc0zQgSoi7PB8CTexE,10249
trufflepig/evidence_tables.py,sha256=nkDc1AT35hGJK-BLHWsNlAbGYVbURCjjzLk5ib0h_Is,14210
trufflepig/expression_normalize.py,sha256=Tg61OXWTmTEhe0RkYxlJM6p9AuAScBSLmhawPsw0K84,18961
trufflepig/expression_qc.py,sha256=MvF3kpNOXGK1DXALA8YQyz8vQM6IECj4IukJNULV_Lc,25012
trufflepig/format.py,sha256=a5LcsXvgOqctFFijkf1zCW1BYMXwQBJA9UJ_-sUQbu8,4738
trufflepig/fusion_effects.py,sha256=NQqNY4uoAo2s1QEsNsULkPT6H_RLDwPMdKozJQRYjro,10951
trufflepig/fusions.py,sha256=Ht3L5Ma-K1FxREoLgA2RzWnvWF6bAoGCNA3jpI2aZdw,12649
trufflepig/healthy_vs_tumor.py,sha256=pKd0LNgP_c4HuDTIJI-ANFjsVynwLjUViL5ANVPLUmw,33977
trufflepig/hla.py,sha256=GPaaVL51I3okR8183SYT6iRY-Obbx3rb7XF_IMRqJDY,4359
trufflepig/load_expression.py,sha256=PwwNIXA7gkmqvmLdLHTh8dK8B0PT-dLJMGkO-48GwK4,58650
trufflepig/main.py,sha256=lJe3bf_NXSOHMQCmGaL77Ix85yxCTGeqI4HgJthjVeQ,332980
trufflepig/pipeline.py,sha256=5jdQhLFI2zgUhP1o4ekfYTGL92ByhX3E2yF4EQHEwxY,2029
trufflepig/plot.py,sha256=ga-BF6uDfX_LlblfR5EYm5ID8uO21wPZq__IWqQXM2Y,5555
trufflepig/plot_context.py,sha256=dJFNB688Ze6Y60kRwM1wte2Ye9tP2de8MhIiQMhj2a4,3280
trufflepig/plot_data_helpers.py,sha256=g-i4BXzBIushmkNC3pSoZMDz78H2YfcHYwpsK4p0YOc,14486
trufflepig/plot_embedding.py,sha256=ToP9EeOp3bAHZIouYDrlf5ObQHl7tP1hYHWNWNt_KxY,104558
trufflepig/plot_reference_lines.py,sha256=psrRc4i2F3c_36EEDydCC-Wh6lWHDNhmqROYRhxuTWE,5775
trufflepig/plot_scatter.py,sha256=RltR16q1BsGwpqcqJKAj_YtS850Va0rtc6-mO6j9FFA,12810
trufflepig/plot_strip.py,sha256=nC-OsqrVtNuvgOIDQrZQq7674eSrgZE95eZGdFn__ro,11306
trufflepig/plot_subtype_signature.py,sha256=TIiekJjg4ywylLafSodmztEc4sYa7ZglJsxZpMxe5cE,9029
trufflepig/plot_target_deep_dive.py,sha256=7NRekwNNl3-N1mUzCUH8xjLG6C8KAPTfJ_xej_C3uKw,56509
trufflepig/plot_therapy.py,sha256=0V-l0DZN4Yy5GdlYhoPFY7l1KBMTCrCpOIobD1P75B4,58872
trufflepig/plot_tumor_expr.py,sha256=wbOq8XEgkYtXqull0bsoM_9aTryyiPlilGAekReo66I,101715
trufflepig/provenance.py,sha256=9e53pacAD8u-42z08fdhPuIjC9nMi4EG-aawsPrHnyY,13161
trufflepig/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
trufflepig/rare_inference.py,sha256=HJDMZI9mLre7wjOFXeKT8IHen-gn9FiucgFbuDGViW4,18799
trufflepig/reasoning.py,sha256=6wwofGe8sIN1wraEHvrWwbbZj16VXkYeCfcJkEGQHVA,15345
trufflepig/reference.py,sha256=DJTiSFax2O1Ieg9wsaV6QQTVOVQzpesr15_Kb3wYYVE,15471
trufflepig/reporting.py,sha256=YN6sUxMK-ykqDjB40oHQzR9jZv2vnZPrEgiWzPT-I7E,59227
trufflepig/rna_qc.py,sha256=vZ8SNPLaugsBOdI2_b2ERZidAGYdcJnAv0_wUHIY4lQ,26763
trufflepig/sample_context.py,sha256=Yv5jmwg9MeeduA310YW5lLVE3h2rI7KW4PSRQu3VVf8,78126
trufflepig/sample_quality.py,sha256=vLScazvZR63mC47-TOSp160_uSQ03yXT2uvkLto95ps,22302
trufflepig/subtype_signature.py,sha256=gtY2wJ9i961nD_xRZxSWWIB3PuzukCoYMd9izQlYcXM,10351
trufflepig/tcga_decompose.py,sha256=EAf2sj5G_eSf2PBR4ZecSaLEENTjQI8uxBBxo2PMZLE,16840
trufflepig/therapy_response.py,sha256=I8fLsgpFWXYEKomgqK4sOYjgiUib_wk-2A7s7ikUTqQ,22003
trufflepig/transcript_to_gene.py,sha256=t-Hq89pnQ2RC1Z1bijyeq4v-RLd3kQNKfBGMEgMUeTw,2477
trufflepig/tumor_evidence.py,sha256=JceRsUGk7V6ewIlog7wXep1U_FyiBcjpHWN8k-ApiDk,8086
trufflepig/tumor_purity.py,sha256=8t1QO9Zj7DraWy71gLr1H1J5LzGIt7w-CRwmWEZjrcM,159824
trufflepig/version.py,sha256=N7AXAtbiceQDL_1riJiLWxf20E-1Y8YjIUk0yxOuklw,230
trufflepig/workspace.py,sha256=a9_vBJKpUxqvgAwL9zd__nXPRJYEuE6rBsM2AlZciaE,3373
trufflepig/analyze/__init__.py,sha256=UTQccscJaw28O2Y1KF6XZCIH9Go_vPLDqNnyONXE24Y,2342
trufflepig/analyze/cancer_type_context.py,sha256=WcG8l-_IH5qVaoMov_ttw4-XAl5fujnXlu4qPuG2Kv8,11189
trufflepig/analyze/comparison.py,sha256=h6MPSLZAzHGnEN6P8jN6VK7G_SlePgfxPWQpSK0o7GI,16872
trufflepig/analyze/deltas.py,sha256=IXHlzSDi0KvNkLuDIn8aLIq0Bt5qS9CIyyA8Td9oNs0,29148
trufflepig/analyze/flow.py,sha256=yAA2dg0315W0ruANr_vgN8qpS6mbWtek0rhjErpOchE,9059
trufflepig/analyze/models.py,sha256=fAxIU5PG09mWOm4o4ESAVxwCPtJVKtVPlUfuHKpFvKE,6984
trufflepig/data/estimate-signatures.csv,sha256=OuWD8R3kgGkPr4WaInDPMqOEdHA75gH2e8A-duWvgdw,8344
trufflepig/data/heme-tumor-up-vs-matched-normal.csv,sha256=4kBVXMN5tAjtrqs7gNoBKU0_JBRJPff8sCPNwvO7iMo,1313
trufflepig/data/hpa-cell-type-expression.csv,sha256=yanwVFbPgqh1uQgZFXiCsRgllX2LMpVPdufCzhvlgHI,7689030
trufflepig/data/pan-cancer-expression.csv,sha256=TIjd9cAK-HGkHEFKx27bwScV7AcxfVlQ_ZeBHpGjSkc,11428485
trufflepig/data/subtype-deconvolved-expression.csv.gz,sha256=kvSTRZQw7BCEe6rYx74bJsOrWXFUUbq-CE2Q5kPn7nA,12117765
trufflepig/data/tcga-deconvolved-expression.csv.gz,sha256=vlcNaNhDBp06i_RH0vlyXeM_9A0fcJAVDXKdPn4TCc4,4812431
trufflepig/data/tumor-up-vs-matched-normal.csv,sha256=JIjIxLA1rtayFOLUSygaCG8lNivL46dvjOUZ-qM0mJ4,21101
trufflepig/decomposition/__init__.py,sha256=_pF78wd-N5-IWwPxE_08Vgxe6AePYJAHx-mkrXTK7Jw,1527
trufflepig/decomposition/engine.py,sha256=VusooETFKQdvRRaNF3k4YzfAVSn8J-ht3nMfWWzafLY,45546
trufflepig/decomposition/panels.py,sha256=5nQbHP3lglYlvtcVdMKyrqosh2bPtQG-X8UhsKqjRrQ,18362
trufflepig/decomposition/plot.py,sha256=IS8Nf14pzF4zeSgugbrjee2qBk35HI0hQsfg2p0WOSM,20118
trufflepig/decomposition/signature.py,sha256=SgJ6lIAsZ7wmIYqZ0q-seelmRC3uX4GrNaCDatIXTAM,23632
trufflepig/decomposition/subtype_refs.py,sha256=LjcXA3hFjH0sATkS9ziS_X-eZT-bPu0jUlLGooGu_I4,16298
trufflepig/decomposition/templates.py,sha256=1xj6zSR1qcNLNHyUNV6fzubaB01lOumV9_PRDVwz_-U,18716
trufflepig/stages/__init__.py,sha256=b6lelmE2Y5LgGqEj_TIL8wxK1WQeyqmFIEIirLRFRb8,1223
trufflepig/web/__init__.py,sha256=yQ9rtxKkPsRrXPq0GaWEwHM1f5PLzE9n7Ie1EgLphTc,825
trufflepig/web/app.py,sha256=q5kY6fXHC6hxQeRV6bRlWSdD-qGyKj2IKPAUOwWrZB8,15754
trufflepig/web/runs.py,sha256=Nt2gA0X961CMwehSv9mWfns-kUkyj-IyxhpLAB3J2Lg,12698
trufflepig/web/static/app.js,sha256=ujj8tzbCuH-FVcbLAPrYQ2Iay40C5IPDT0W0k9BC9mo,3314
trufflepig/web/static/index.html,sha256=LY63rkpbBAZcR9hSdmW_E423YRoyAfNNjdR11uOiwOQ,2270
trufflepig/web/static/style.css,sha256=g8GKOuS0ynupY9T1kUr6EoiBIL9MrKHHGbCBZUPcOSw,3190
pirl_trufflepig-1.2.0.dist-info/METADATA,sha256=VB7GOZL8A8E1ev9jVJ4TTyexbsqKiB4fKQO-YTaSaBk,9835
pirl_trufflepig-1.2.0.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
pirl_trufflepig-1.2.0.dist-info/entry_points.txt,sha256=mXwn2d38onrRtUyVkPjmyMbvBWWRadzoRLvBYIiPgss,51
pirl_trufflepig-1.2.0.dist-info/top_level.txt,sha256=5-ZDL5rMysoV8tAKdk8vuqXR7hb6jJ_GZ0azxX5Bme8,11
pirl_trufflepig-1.2.0.dist-info/RECORD,,
