VEP run statistics
VEP version (API) | 104 (104) |
Annotation sources | Cache: /data_local/2/Ensembl-vep_cache/homo_sapiens/104_GRCh38 |
Species | homo_sapiens |
Command line options | --cache --dir /data_local/2/Ensembl-vep_cache --everything --fasta /data_local/3/chrX_1_28000.fasta --fork --format vcf --input_file /data_local/1/snp.recalibrated_chrX_28000.vcf.gz --offline --output_file snp_annotated.vcf --verbose |
Start time | 2021-12-21 09:36:22 |
End time | 2021-12-21 09:36:23 |
Run time | 1 seconds |
Input file | /data_local/1/snp.recalibrated_chrX_28000.vcf.gz |
Output file | snp_annotated.vcf |
General statistics
Lines of input read | 27 |
Variants processed | 27 |
Variants filtered out | 0 |
Novel / existing variants | - |
Overlapped genes | 0 |
Overlapped transcripts | 0 |
Overlapped regulatory features | 0 |