Ensembl
VEP
Links

VEP run statistics

VEP version (API) 104 (104)
Annotation sourcesCache: /data_local/2/Ensembl-vep_cache/homo_sapiens/104_GRCh38
Specieshomo_sapiens
Command line options
--cache --dir /data_local/2/Ensembl-vep_cache --everything --fasta /data_local/3/chrX_1_28000.fasta --fork --format vcf --input_file /data_local/1/snp.recalibrated_chrX_28000.vcf.gz --offline --output_file snp_annotated.vcf --verbose
Start time2021-12-21 09:36:22
End time2021-12-21 09:36:23
Run time1 seconds
Input file/data_local/1/snp.recalibrated_chrX_28000.vcf.gz
Output filesnp_annotated.vcf

General statistics

Lines of input read27
Variants processed27
Variants filtered out0
Novel / existing variants-
Overlapped genes0
Overlapped transcripts0
Overlapped regulatory features0

Variant classes

 
 

Consequences (most severe)

 
 

Consequences (all)

 
 

Coding consequences

 
 

Variants by chromosome

 
 

Distribution of variants on chromosome chrX