.gitignore
.pre-commit-config.yaml
LICENSE
MAINTAINERS.md
README.md
pyproject.toml
zensical.toml
.binder/postBuild
.binder/runtime.txt
.github/PULL_REQUEST_TEMPLATE.md
.github/ISSUE_TEMPLATE/config.yml
.github/ISSUE_TEMPLATE/propose-vignette.yml
.github/workflows/checks.yaml
.github/workflows/publish.yml
.github/workflows/release.yaml
docs/about.md
docs/index.md
docs/assets/css/extra.css
docs/assets/images/ga4gh-favicon.svg
docs/assets/images/ga4gh-logo.svg
docs/assets/images/gkm-logo.svg
docs/assets/images/python-package-logo.png
docs/assets/js/external-links.js
docs/data/bulk.md
docs/data/index.md
docs/data/native.md
docs/data/bundle/examples.md
docs/data/bundle/index.md
docs/data/bundle/repository.md
docs/data/bundle/schemas-and-contents.md
docs/tools/index.md
docs/tools/reference-implementations.md
docs/tools/gkm-toolkit/development.md
docs/tools/gkm-toolkit/index.md
docs/tools/gkm-toolkit/installation.md
docs/tools/gkm-toolkit/quick-start.md
docs/tools/gkm-toolkit/api/containers.md
docs/tools/gkm-toolkit/api/errors.md
docs/tools/gkm-toolkit/api/index.md
docs/tools/gkm-toolkit/api/loading.md
docs/tools/gkm-toolkit/api/model-conversion.md
docs/tools/gkm-toolkit/api/pointers.md
docs/tools/gkm-toolkit/api/registry.md
docs/tools/gkm-toolkit/api/repository.md
docs/tools/gkm-toolkit/api/schema-resolution.md
docs/tools/gkm-toolkit/api/schema-validation.md
docs/tools/gkm-toolkit/notebooks/index.md
docs/user-stories/contribute.md
docs/user-stories/patterns.yml
docs/user-stories/_template/README.md
docs/user-stories/_template/vignette.md
docs/user-stories/brca/identifying-unique-variants-vrs/vignette.md
docs/user-stories/brca/identifying-unique-variants-vrs/payloads/brca1-variant.vrs.json
docs/user-stories/civic/civic-oncogenicity-gkm/vignette/index.md
docs/user-stories/clingen/harmonizing-clinvar-by-vrs-identity/vignette.md
docs/user-stories/individual-centric-genomics-platform-jpn/auditable-personal-genomic-knowledge/vignette.md
notebooks/civic/bundles/civic-assertion-251-bundle.json
notebooks/civic/bundles/civic-assertion-9-bundle.json
notebooks/civic/bundles/civic-gkm-bundle-v0.1.0-a0.schema.json
notebooks/civic/bundles/explore-civic-bundles.ipynb
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-approvals-ui.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-assessment.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-claim.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-diseaase-ui.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-eids-ui.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-molecular-profile-ui.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-summary-ui.png
notebooks/civic/vignettes/oncogenicity/civic-assertion-202-ui.png
notebooks/civic/vignettes/oncogenicity/civic-disease-medullary-thyroid-carcinoma.png
notebooks/civic/vignettes/oncogenicity/civic-molecular-profile-ret-m918t.png
notebooks/civic/vignettes/oncogenicity/civic-oncogenicity-gkm.ipynb
notebooks/civic/vignettes/oncogenicity/civic-variant-M918T.png
notebooks/repository/load-public-bundle.ipynb
notebooks/validation/validate-bundles.ipynb
scripts/__init__.py
scripts/build_docs.py
scripts/bundle_examples.py
scripts/gen_downloads.py
scripts/gen_filter_pages.py
scripts/gen_notebook_files.py
scripts/gen_schema_pages.py
scripts/gen_supported_versions.py
scripts/generate_vignette_from_issue.py
scripts/vignette_loader.py
src/ga4gh.gkm.egg-info/PKG-INFO
src/ga4gh.gkm.egg-info/SOURCES.txt
src/ga4gh.gkm.egg-info/dependency_links.txt
src/ga4gh.gkm.egg-info/requires.txt
src/ga4gh.gkm.egg-info/scm_file_list.json
src/ga4gh.gkm.egg-info/scm_version.json
src/ga4gh.gkm.egg-info/top_level.txt
src/ga4gh/gkm/__init__.py
src/ga4gh/gkm/bundles/__init__.py
src/ga4gh/gkm/bundles/compatibility.py
src/ga4gh/gkm/bundles/containers.py
src/ga4gh/gkm/bundles/errors.py
src/ga4gh/gkm/bundles/loading.py
src/ga4gh/gkm/bundles/model_conversion.py
src/ga4gh/gkm/bundles/pointers.py
src/ga4gh/gkm/bundles/registry.py
src/ga4gh/gkm/bundles/repository.py
src/ga4gh/gkm/bundles/schema_resolution.py
src/ga4gh/gkm/bundles/schema_validation.py
tests/conftest.py
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tests/bundles/unit/test_compatibility.py
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tests/bundles/unit/test_registry.py
tests/bundles/unit/test_repository.py
tests/bundles/unit/test_schema_resolution.py
tests/bundles/unit/test_schema_validation.py