.coveragerc
.env.example
.pre-commit-config.yaml
.readthedocs.yaml
AUTHORS.md
CHANGELOG.md
CODE_OF_CONDUCT.md
CONTRIBUTING.md
Dockerfile
Dockerfile.dev
LICENSE
MANIFEST.in
README.md
docker-compose.dev.yml
docker-compose.yml
pyproject.toml
requirements.txt
setup.cfg
setup.py
config/calibration/thresholds.json
config/calibration/weights.json
config/sensors/adcp.yaml
config/sensors/amar.yaml
config/sensors/pam.yaml
config/sensors/sami.yaml
config/sensors/sbe37.yaml
coralcore/__init__.py
coralcore/instrumentation/__init__.py
coralcore/instrumentation/adcp.py
coralcore/instrumentation/amar_g4.py
coralcore/instrumentation/diving_pam.py
coralcore/instrumentation/photogrammetry.py
coralcore/instrumentation/sami_alk.py
coralcore/instrumentation/sbe37.py
coralcore/models/__init__.py
coralcore/models/bayesian_statespace.py
coralcore/models/dynamic_factor.py
coralcore/models/gaussian_process.py
coralcore/models/pinn.py
coralcore/parameters/__init__.py
coralcore/parameters/acidification_lag.py
coralcore/parameters/acoustic_signature.py
coralcore/parameters/bleaching_threshold.py
coralcore/parameters/calcification.py
coralcore/parameters/quantum_yield.py
coralcore/parameters/skeletal_density.py
coralcore/parameters/surface_roughness.py
coralcore/parameters/wave_dissipation.py
coralcore/rhi/__init__.py
coralcore/rhi/alert.py
coralcore/rhi/composite.py
coralcore/rhi/weights.py
coralcore/utils/__init__.py
coralcore/utils/acoustics.py
coralcore/utils/chemistry.py
coralcore/utils/visualization.py
coralcore/validation/__init__.py
coralcore/validation/cross_validation.py
coralcore/validation/sites.py
coralcore/validation/uncertainty.py
notebooks/01_parameter_overview.ipynb
notebooks/02_rhi_calibration.ipynb
notebooks/03_bleaching_prediction.ipynb
notebooks/04_acoustic_restoration.ipynb
notebooks/05_case_study_red_sea.ipynb
scripts/backup.sh
scripts/compute_rhi.py
scripts/deploy.sh
scripts/download_samples.py
scripts/edge_controller.py
scripts/init_coralcore.py
scripts/restore.sh
scripts/run_collector.py
scripts/run_processor.py
scripts/test_sensors.py
scripts/verify_installation.py
tests/conftest.py
tests/test_instrumentation.py
tests/test_models.py
tests/test_parameters.py
tests/test_rhi.py
tests/data/sample_parameters.csv