LICENSE
README.md
pyproject.toml
src/split3c/__init__.py
src/split3c/cli.py
src/split3c.egg-info/PKG-INFO
src/split3c.egg-info/SOURCES.txt
src/split3c.egg-info/dependency_links.txt
src/split3c.egg-info/entry_points.txt
src/split3c.egg-info/requires.txt
src/split3c.egg-info/top_level.txt
src/split3c/nssite/__init__.py
src/split3c/nssite/auxiliary.py
src/split3c/nssite/bam.py
src/split3c/nssite/fastq.py
src/split3c/nssite/main.py
src/split3c/nssite/processmanager.py
src/split3c/nssite/split.py
src/split3c/resite/__init__.py
src/split3c/resite/frag.py
src/split3c/resite/header.py
src/split3c/resite/index.py
src/split3c/resite/main.py
src/split3c/resite/pretreatment.py
src/split3c/resite/read.py
src/split3c/resite/write_control.py
src/split3c/resolve/__init__.py
src/split3c/resolve/bam.py
src/split3c/resolve/io_utils.py
src/split3c/resolve/main.py
src/split3c/resolve/pairs.py
src/split3c/resolve/parse.py