# Complied python modules
*.pyc

# Setuptools distribution folder.
/dist/

# Python egg metadata, regenerated from source files by setuptools.
/*.egg-info

# Hidden files and directories
*.DS_Store
.vscode/

# pypi build folder
/build/

# MkDocs build output
/site/
SigProfilerMatrixGenerator/_version.py
SigProfilerMatrixGenerator/references/chromosomes/tsb/
SigProfilerMatrixGenerator/references/vcf_files/*_bench/input/
SigProfilerMatrixGenerator/references/vcf_files/*_bench/output/
SigProfilerMatrixGenerator/references/vcf_files/*_bench/logs/
SigProfilerMatrixGenerator/references/tests/*/input/
SigProfilerMatrixGenerator/references/tests/*/logs/
SigProfilerMatrixGenerator/references/tests/*/output/
SigProfilerMatrixGenerator/install.log

# SV Example Files
SigProfilerMatrixGenerator/references/SV/example_output/*
SigProfilerMatrixGenerator/references/SV/example_input/VCF/*.tsv
SigProfilerMatrixGenerator/references/SV/example_input/VCF/*.bedpe

# OSF mirror outputs
/docs/osf_wiki/
/docs/assets/osf/*
!/docs/assets/osf/osf_asset_unavailable.svg
