Metadata-Version: 2.1
Name: stPlus
Version: 0.0.6
Summary: stPlus: reference-based enhancement of spatial transcriptomics
Home-page: https://github.com/xy-chen16/stPlus
Author: Xiaoyang Chen
Author-email: xychen20@mails.tsinghua.edu.cn
Maintainer: Shengquan Chen
Maintainer-email: ccq17@mails.tsinghua.edu.cn
License: MIT Licence
Keywords: pip,stPlus
Platform: UNKNOWN
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3.8
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >3.6.0
Requires-Dist: torch (>=1.6.0)
Requires-Dist: torchvision (>=0.7.0)
Requires-Dist: pandas (>=1.1.0b)
Requires-Dist: numpy (>=1.19.1)
Requires-Dist: scipy (>=1.5.2)
Requires-Dist: scikit-learn (>=0.23.2)

stPlus is a reference-based method for the enhancement of spatial transcriptomics. Leveraging the holistic information in reference scRNA-seq data but not limited to the genes shared with spatial data, stPlus performs non-linear embedding for cells in both datasets and effectively predicts unmeasured spatial gene expression. All stPlus wheels distributed on PyPI are MIT licensed.


