#Console: python3 ../../transit.py zinb iron_combined_wig4.txt iron_samples_metadata.txt ../genomes/H37Rv.prot_table temp3.txt --ref FeCMBT
#parameters: normalization=TTR, trimming=5.0/5.0% (N/C), pseudocounts=5.0
#Rv	Gene	TAs	Mean_HighFeMBT	Mean_LowFeMBT	Mean_FeCMBT	Mean_Hemin	Mean_Hemoglobin	Mean_HeminMBT	LFC_HighFeMBT	LFC_LowFeMBT	LFC_FeCMBT	LFC_Hemin	LFC_Hemoglobin	LFC_HeminMBT	NZmean_HighFeMBT	NZmean_LowFeMBT	NZmean_FeCMBT	NZmean_Hemin	NZmean_Hemoglobin	NZmean_HeminMBT	NZperc_HighFeMBT	NZperc_LowFeMBT	NZperc_FeCMBT	NZperc_Hemin	NZperc_Hemoglobin	NZperc_HeminMBT	pval	padj	status
Rv0001	dnaA	29	0.0	0.0	0.0	0.1	0.2	0.0	0.000	0.000	0.000	0.042	0.044	0.000	0.0	0.0	0.0	13.0	9.0	0.0	0.00	0.00	0.00	0.01	0.02	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0002	dnaN	27	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0003	recF	33	58.6	53.7	59.7	60.6	52.5	60.1	-0.024	-0.139	0.000	0.020	-0.170	0.010	76.3	66.9	74.3	73.2	60.8	69.6	0.77	0.80	0.80	0.83	0.86	0.86	0.973754	1.000000	-
Rv0004	-	5	0.0	1.0	1.3	1.7	0.9	1.1	-0.324	-0.061	0.000	0.104	-0.085	-0.042	0.0	10.0	12.6	25.9	9.0	10.8	0.00	0.10	0.10	0.07	0.10	0.10	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0005	gyrB	38	0.2	0.1	0.0	0.0	0.0	0.0	0.056	0.039	0.000	0.000	0.000	0.000	22.6	10.4	0.0	0.0	0.0	0.0	0.01	0.01	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0006	gyrA	42	0.0	0.1	0.0	0.0	0.0	0.0	0.000	0.035	0.000	0.000	0.000	0.000	0.0	10.4	0.0	0.0	0.0	0.0	0.00	0.01	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0007	-	10	142.7	223.2	159.9	217.6	263.5	142.3	-0.159	0.468	0.000	0.432	0.703	-0.163	142.7	223.2	159.9	233.1	263.5	142.3	1.00	1.00	1.00	0.93	1.00	1.00	0.001536	0.028765	-
Rv0008c	-	4	37.2	34.5	37.6	32.9	30.2	39.2	-0.014	-0.109	0.000	-0.167	-0.274	0.052	55.8	46.0	50.1	43.9	34.5	52.2	0.67	0.75	0.75	0.75	0.88	0.75	0.965802	1.000000	-
Rv0009	ppiA	6	103.4	145.2	135.0	164.1	165.1	125.2	-0.369	0.102	0.000	0.273	0.281	-0.105	124.1	145.2	147.2	164.1	165.1	150.2	0.83	1.00	0.92	1.00	1.00	0.83	0.279021	1.000000	-
Rv0010c	-	9	179.5	205.5	138.0	144.1	163.4	178.2	0.367	0.558	0.000	0.060	0.235	0.357	242.3	264.2	191.1	185.3	210.0	246.7	0.74	0.78	0.72	0.78	0.78	0.72	0.994611	1.000000	-
Rv0011c	-	3	27.4	39.1	11.5	64.6	65.9	38.5	0.979	1.422	0.000	2.079	2.105	1.400	30.9	39.1	22.9	64.6	65.9	38.5	0.89	1.00	0.50	1.00	1.00	1.00	0.009317	0.131829	-
Rv0012	-	14	81.2	124.2	89.4	78.0	75.9	84.0	-0.131	0.453	0.000	-0.185	-0.222	-0.085	87.4	124.2	92.7	88.6	92.4	94.1	0.93	1.00	0.96	0.88	0.82	0.89	0.084621	0.679353	-
Rv0013	trpG	12	1.4	2.9	4.4	2.4	1.7	0.8	-0.560	-0.249	0.000	-0.356	-0.489	-0.693	16.9	35.3	53.3	28.6	20.8	10.1	0.08	0.08	0.08	0.08	0.08	0.08	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0014c	pknB	22	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0015c	pknA	13	1.3	8.2	5.8	5.8	3.4	6.7	-0.771	0.293	0.000	0.006	-0.360	0.112	25.7	106.7	75.1	75.7	44.2	86.5	0.05	0.08	0.08	0.08	0.08	0.08	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0016c	pbpA	34	51.0	71.8	59.6	66.5	87.5	60.0	-0.206	0.251	0.000	0.148	0.519	0.009	69.3	85.7	77.9	78.9	94.5	72.8	0.74	0.84	0.76	0.84	0.93	0.82	0.050433	0.473478	-
Rv0017c	rodA	23	76.1	131.0	70.3	141.5	181.5	128.8	0.106	0.852	0.000	0.959	1.308	0.828	87.5	133.9	77.0	152.5	181.5	128.8	0.87	0.98	0.91	0.93	1.00	1.00	0.000000	0.000014	-
Rv0018c	ppp	23	58.5	75.4	61.7	93.2	98.1	83.5	-0.071	0.269	0.000	0.557	0.628	0.408	103.5	123.9	113.6	153.1	161.2	137.2	0.57	0.61	0.54	0.61	0.61	0.61	0.209086	1.000000	-
Rv0019c	-	12	212.4	227.1	165.6	285.2	272.2	228.5	0.350	0.444	0.000	0.766	0.700	0.453	212.4	227.1	172.8	285.2	272.2	228.5	1.00	1.00	0.96	1.00	1.00	1.00	0.025046	0.280712	-
Rv0020c	TB39.8	50	23.1	28.7	22.6	31.0	31.1	29.7	0.027	0.291	0.000	0.383	0.390	0.332	144.4	179.6	141.1	193.4	194.6	174.7	0.16	0.16	0.16	0.16	0.16	0.17	0.750252	1.000000	-
Rv0021c	-	18	257.3	247.8	260.7	244.1	248.5	235.7	-0.019	-0.072	0.000	-0.093	-0.067	-0.142	257.3	254.8	260.7	244.1	248.5	235.7	1.00	0.97	1.00	1.00	1.00	1.00	0.967228	1.000000	-
Rv0022c	whiB5	8	345.2	361.5	382.6	350.3	297.7	288.6	-0.147	-0.081	0.000	-0.126	-0.357	-0.401	376.5	361.5	382.6	350.3	340.2	307.8	0.92	1.00	1.00	1.00	0.88	0.94	0.636490	1.000000	-
Rv0023	-	12	3.6	9.7	1.6	12.1	18.6	4.7	0.381	1.159	0.000	1.379	1.841	0.564	25.7	23.2	37.9	27.3	29.7	18.9	0.14	0.42	0.04	0.44	0.62	0.25	0.000537	0.011589	-
Rv0024	-	11	325.0	287.0	330.5	261.7	303.8	273.1	-0.024	-0.200	0.000	-0.331	-0.120	-0.270	325.0	300.6	330.5	287.8	303.8	300.5	1.00	0.95	1.00	0.91	1.00	0.91	0.437178	1.000000	-
Rv0025	-	6	172.5	168.1	163.1	179.5	144.6	157.5	0.079	0.042	0.000	0.135	-0.168	-0.049	182.7	168.1	163.1	179.5	144.6	157.5	0.94	1.00	1.00	1.00	1.00	1.00	0.968647	1.000000	-
Rv0026	-	12	119.9	123.4	112.4	121.8	112.9	142.3	0.089	0.130	0.000	0.111	0.006	0.327	159.9	148.1	134.9	146.2	123.1	155.2	0.75	0.83	0.83	0.83	0.92	0.92	0.918826	1.000000	-
Rv0027	-	5	40.1	25.4	41.9	33.7	42.8	39.3	-0.055	-0.623	0.000	-0.276	0.028	-0.081	40.1	28.3	59.8	36.1	47.5	56.1	1.00	0.90	0.70	0.93	0.90	0.70	0.089202	0.696425	-
Rv0028	-	4	122.0	159.4	127.4	117.4	97.5	144.8	-0.060	0.312	0.000	-0.113	-0.370	0.178	122.0	159.4	127.4	117.4	97.5	144.8	1.00	1.00	1.00	1.00	1.00	1.00	0.750964	1.000000	-
Rv0029	-	17	237.3	227.7	257.4	232.6	236.8	243.1	-0.115	-0.173	0.000	-0.143	-0.118	-0.081	237.3	241.9	273.5	247.1	236.8	243.1	1.00	0.94	0.94	0.94	1.00	1.00	0.375541	1.000000	-
Rv0030	-	5	209.7	234.4	261.4	215.2	252.6	214.2	-0.311	-0.154	0.000	-0.274	-0.048	-0.281	209.7	234.4	261.4	269.0	252.6	214.2	1.00	1.00	1.00	0.80	1.00	1.00	0.350441	1.000000	-
Rv0031	-	1	0.0	30.1	15.5	0.0	102.9	51.4	-2.036	0.776	0.000	-2.036	2.396	1.460	0.0	30.1	31.0	0.0	102.9	51.4	0.00	1.00	0.50	0.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0032	bioF2	50	106.2	102.5	107.0	108.0	105.9	113.1	-0.010	-0.059	0.000	0.013	-0.014	0.077	147.5	136.7	159.7	132.8	137.6	139.6	0.72	0.75	0.67	0.81	0.77	0.81	0.742727	1.000000	-
Rv0033	acpA	3	51.1	71.4	65.6	62.0	77.6	82.3	-0.332	0.114	0.000	-0.075	0.227	0.306	51.1	71.4	65.6	62.0	77.6	82.3	1.00	1.00	1.00	1.00	1.00	1.00	0.885847	1.000000	-
Rv0034	-	5	175.4	188.4	147.4	171.3	156.5	178.5	0.243	0.344	0.000	0.210	0.084	0.268	219.2	209.3	184.2	183.5	156.5	198.4	0.80	0.90	0.80	0.93	1.00	0.90	0.901108	1.000000	-
Rv0035	fadD34	24	332.8	320.3	341.1	345.6	313.2	327.6	-0.035	-0.090	0.000	0.019	-0.121	-0.057	357.6	341.7	341.1	350.5	326.8	327.6	0.93	0.94	1.00	0.99	0.96	1.00	0.394177	1.000000	-
Rv0036c	-	4	345.2	383.3	327.7	344.3	345.8	332.6	0.074	0.223	0.000	0.070	0.076	0.021	345.2	383.3	327.7	344.3	345.8	332.6	1.00	1.00	1.00	1.00	1.00	1.00	0.971788	1.000000	-
Rv0037c	-	17	211.4	273.5	252.9	352.7	326.4	241.5	-0.253	0.110	0.000	0.472	0.362	-0.065	229.4	273.5	252.9	352.7	358.0	241.5	0.92	1.00	1.00	1.00	0.91	1.00	0.017378	0.211547	-
Rv0038	-	7	222.1	220.6	226.0	181.1	218.8	208.9	-0.025	-0.034	0.000	-0.312	-0.046	-0.111	222.1	237.6	226.0	181.1	218.8	208.9	1.00	0.93	1.00	1.00	1.00	1.00	0.878071	1.000000	-
Rv0039c	-	4	635.5	474.6	550.3	498.6	415.6	420.6	0.206	-0.211	0.000	-0.141	-0.401	-0.384	635.5	632.8	550.3	498.6	474.9	560.8	1.00	0.75	1.00	1.00	0.88	0.75	0.352179	1.000000	-
Rv0040c	mtc28	8	196.9	215.2	146.9	195.3	218.3	186.0	0.411	0.536	0.000	0.399	0.556	0.330	196.9	215.2	146.9	195.3	218.3	186.0	1.00	1.00	1.00	1.00	1.00	1.00	0.822460	1.000000	-
Rv0041	leuS	66	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0042c	-	5	58.9	70.3	75.3	51.5	46.5	70.4	-0.330	-0.094	0.000	-0.507	-0.640	-0.091	63.1	70.3	83.7	51.5	46.5	78.2	0.93	1.00	0.90	1.00	1.00	0.90	0.335526	1.000000	-
Rv0043c	-	7	105.5	121.6	96.9	93.8	76.5	107.3	0.116	0.313	0.000	-0.045	-0.323	0.140	105.5	121.6	96.9	93.8	76.5	107.3	1.00	1.00	1.00	1.00	1.00	1.00	0.305845	1.000000	-
Rv0044c	-	19	118.0	130.7	120.9	127.3	124.9	128.6	-0.033	0.109	0.000	0.072	0.045	0.086	137.2	141.9	131.2	134.4	135.6	128.6	0.86	0.92	0.92	0.95	0.92	1.00	0.607605	1.000000	-
Rv0045c	-	6	299.2	312.3	335.2	334.6	325.2	395.2	-0.161	-0.100	0.000	-0.003	-0.043	0.234	299.2	312.3	335.2	334.6	325.2	395.2	1.00	1.00	1.00	1.00	1.00	1.00	0.969744	1.000000	-
Rv0046c	ino1	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0047c	-	7	106.4	119.5	115.7	161.9	152.9	123.1	-0.115	0.045	0.000	0.468	0.388	0.086	117.6	128.7	124.6	179.0	178.4	143.7	0.90	0.93	0.93	0.90	0.86	0.86	0.838798	1.000000	-
Rv0048c	-	14	161.7	144.8	134.0	153.2	165.8	174.7	0.263	0.108	0.000	0.187	0.297	0.370	205.8	162.2	163.1	169.4	193.4	195.6	0.79	0.89	0.82	0.90	0.86	0.89	0.949020	1.000000	-
Rv0049	-	6	164.1	286.3	204.7	362.0	382.1	233.0	-0.311	0.474	0.000	0.807	0.884	0.183	184.6	286.3	245.7	362.0	382.1	233.0	0.89	1.00	0.83	1.00	1.00	1.00	0.110898	0.784724	-
Rv0050	ponA1	33	37.0	60.2	41.1	55.8	65.6	49.6	-0.135	0.500	0.000	0.399	0.614	0.243	51.6	66.2	57.7	72.7	73.3	55.5	0.72	0.91	0.71	0.77	0.89	0.89	0.002083	0.037609	-
Rv0051	-	33	117.5	106.2	120.2	120.2	122.0	105.3	-0.031	-0.171	0.000	0.000	0.021	-0.183	136.8	116.8	130.0	126.6	138.8	110.3	0.86	0.91	0.92	0.95	0.88	0.95	0.497814	1.000000	-
Rv0052	-	6	130.2	60.1	100.6	105.2	74.9	93.3	0.357	-0.698	0.000	0.062	-0.402	-0.103	130.2	60.1	109.7	105.2	81.7	112.0	1.00	1.00	0.92	1.00	0.92	0.83	0.155290	0.963618	-
Rv0053	rpsF	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0054	ssb	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0055	rpsR	4	15.5	21.8	19.5	27.4	39.7	22.1	-0.256	0.127	0.000	0.405	0.868	0.144	62.1	87.0	78.0	109.8	158.9	88.3	0.25	0.25	0.25	0.25	0.25	0.25	0.604188	1.000000	-
Rv0056	rplI	7	152.3	153.3	116.3	93.4	103.7	153.2	0.375	0.385	0.000	-0.302	-0.158	0.384	199.8	165.1	135.6	103.2	121.0	165.0	0.76	0.93	0.86	0.90	0.86	0.93	0.663703	1.000000	-
Rv0057	-	15	45.7	51.3	64.4	60.9	66.8	59.1	-0.453	-0.300	0.000	-0.075	0.049	-0.115	58.8	61.6	96.6	76.1	71.6	73.8	0.78	0.83	0.67	0.80	0.93	0.80	0.168147	0.995413	-
Rv0058	dnaB	36	0.0	0.0	0.0	0.0	0.1	0.0	0.000	0.000	0.000	0.000	0.036	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.01	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0059	-	16	187.0	141.1	193.9	158.2	171.2	126.0	-0.051	-0.445	0.000	-0.286	-0.175	-0.602	208.8	155.7	221.6	185.2	182.6	149.4	0.90	0.91	0.88	0.85	0.94	0.84	0.828349	1.000000	-
Rv0060	-	20	0.0	0.5	0.0	1.4	2.3	0.5	0.000	0.140	0.000	0.356	0.545	0.139	0.0	10.2	0.0	28.0	46.0	10.1	0.00	0.05	0.00	0.05	0.05	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0061	-	6	72.0	73.0	115.0	76.1	80.2	69.3	-0.639	-0.621	0.000	-0.564	-0.494	-0.690	81.0	73.0	125.4	76.1	80.2	69.3	0.89	1.00	0.92	1.00	1.00	1.00	0.503410	1.000000	-
Rv0062	celA1	19	251.4	255.9	232.6	264.7	238.6	229.6	0.109	0.135	0.000	0.183	0.036	-0.019	255.9	270.1	238.9	264.7	238.6	229.6	0.98	0.95	0.97	1.00	1.00	1.00	0.609076	1.000000	-
Rv0063	-	21	112.6	107.1	117.6	103.0	104.9	109.3	-0.061	-0.129	0.000	-0.184	-0.158	-0.101	128.9	109.7	123.5	108.1	110.1	114.8	0.87	0.98	0.95	0.95	0.95	0.95	0.864149	1.000000	-
Rv0064	-	64	84.1	73.3	92.8	78.1	68.0	76.9	-0.134	-0.320	0.000	-0.236	-0.423	-0.255	100.9	86.9	111.0	92.0	82.1	89.5	0.83	0.84	0.84	0.85	0.83	0.86	0.875568	1.000000	-
Rv0065	-	7	103.7	122.3	106.5	114.9	120.1	113.4	-0.036	0.191	0.000	0.104	0.166	0.087	136.1	155.7	124.2	141.9	140.1	113.4	0.76	0.79	0.86	0.81	0.86	1.00	0.610859	1.000000	-
Rv0066c	icd2	32	59.8	87.7	57.7	110.0	117.6	81.7	0.047	0.564	0.000	0.875	0.967	0.468	83.2	105.9	73.9	122.8	125.5	93.4	0.72	0.83	0.78	0.90	0.94	0.88	0.000054	0.001444	-
Rv0067c	-	11	84.6	139.3	98.4	127.1	145.2	99.1	-0.207	0.481	0.000	0.354	0.539	0.010	93.0	153.2	108.2	139.8	145.2	103.8	0.91	0.91	0.91	0.91	1.00	0.95	0.023720	0.268871	-
Rv0068	-	11	208.5	188.3	182.7	185.6	188.6	192.3	0.186	0.042	0.000	0.023	0.045	0.072	221.9	197.2	223.3	235.6	188.6	192.3	0.94	0.95	0.82	0.79	1.00	1.00	0.216460	1.000000	-
Rv0069c	sdaA	11	64.3	64.7	65.4	51.5	66.7	63.7	-0.022	-0.013	0.000	-0.316	0.026	-0.036	75.8	64.7	79.9	58.6	81.5	66.7	0.85	1.00	0.82	0.88	0.82	0.95	0.353422	1.000000	-
Rv0070c	glyA2	16	175.6	171.7	186.6	174.0	166.8	148.2	-0.085	-0.117	0.000	-0.098	-0.158	-0.323	191.6	196.2	199.0	203.7	172.1	163.5	0.92	0.88	0.94	0.85	0.97	0.91	0.871233	1.000000	-
Rv0071	-	8	139.7	151.5	175.9	149.7	137.6	218.2	-0.322	-0.209	0.000	-0.226	-0.344	0.303	159.7	202.0	201.0	171.1	137.6	232.8	0.88	0.75	0.88	0.88	1.00	0.94	0.447956	1.000000	-
Rv0072	-	16	249.3	289.5	249.0	259.8	271.0	275.5	0.002	0.213	0.000	0.060	0.120	0.143	272.0	308.8	265.6	271.1	271.0	293.9	0.92	0.94	0.94	0.96	1.00	0.94	0.787602	1.000000	-
Rv0073	-	13	256.2	249.8	199.8	208.8	209.7	223.8	0.351	0.315	0.000	0.062	0.068	0.160	256.2	249.8	216.4	208.8	209.7	223.8	1.00	1.00	0.92	1.00	1.00	1.00	0.551428	1.000000	-
Rv0074	-	14	144.3	144.9	143.7	145.6	142.3	166.3	0.006	0.011	0.000	0.018	-0.014	0.204	144.3	144.9	149.0	149.1	147.5	166.3	1.00	1.00	0.96	0.98	0.96	1.00	0.843118	1.000000	-
Rv0075	-	22	170.5	170.1	174.3	177.2	164.9	169.9	-0.031	-0.035	0.000	0.023	-0.078	-0.036	212.3	207.9	213.1	208.8	196.1	196.7	0.80	0.82	0.82	0.85	0.84	0.86	0.999994	1.000000	-
Rv0076c	-	3	171.9	191.9	158.7	169.1	244.6	261.8	0.112	0.266	0.000	0.089	0.609	0.705	171.9	191.9	158.7	169.1	244.6	261.8	1.00	1.00	1.00	1.00	1.00	1.00	0.429712	1.000000	-
Rv0077c	-	11	148.0	106.0	143.9	140.6	118.5	115.4	0.039	-0.423	0.000	-0.033	-0.269	-0.307	148.0	111.1	143.9	140.6	130.4	126.9	1.00	0.95	1.00	1.00	0.91	0.91	0.313361	1.000000	-
Rv0078	-	7	76.4	69.9	45.6	66.5	66.9	62.6	0.685	0.564	0.000	0.498	0.506	0.417	100.3	88.9	71.0	82.2	85.2	73.0	0.76	0.79	0.64	0.81	0.79	0.86	0.992854	1.000000	-
Rv0078A	-	9	94.2	84.6	94.4	98.4	91.5	110.9	-0.003	-0.150	0.000	0.057	-0.043	0.221	101.8	89.6	106.2	102.2	96.9	117.4	0.93	0.94	0.89	0.96	0.94	0.94	0.993692	1.000000	-
Rv0079	-	13	265.9	230.2	239.6	234.2	223.3	202.3	0.147	-0.056	0.000	-0.032	-0.099	-0.238	272.9	239.4	249.1	240.4	223.3	202.3	0.97	0.96	0.96	0.97	1.00	1.00	0.948984	1.000000	-
Rv0080	-	3	53.3	49.2	44.9	60.2	28.6	73.3	0.224	0.118	0.000	0.384	-0.574	0.650	53.3	49.2	53.9	67.7	34.3	73.3	1.00	1.00	0.83	0.89	0.83	1.00	0.446269	1.000000	-
Rv0081	-	5	93.2	91.4	117.0	71.7	122.0	97.6	-0.313	-0.340	0.000	-0.669	0.058	-0.250	116.5	130.5	146.2	119.6	152.5	139.4	0.80	0.70	0.80	0.60	0.80	0.70	0.938299	1.000000	-
Rv0082	-	7	115.3	121.5	122.8	123.7	109.6	100.9	-0.087	-0.015	0.000	0.010	-0.158	-0.271	142.4	130.9	156.3	173.2	118.0	117.7	0.81	0.93	0.79	0.71	0.93	0.86	0.859666	1.000000	-
Rv0083	-	20	256.7	239.0	255.3	257.9	257.9	210.8	0.008	-0.094	0.000	0.014	0.014	-0.271	280.0	265.5	276.0	257.9	286.6	234.2	0.92	0.90	0.93	1.00	0.90	0.90	0.260681	1.000000	-
Rv0084	hycD	7	115.9	127.2	130.8	123.8	115.6	140.4	-0.168	-0.039	0.000	-0.076	-0.172	0.098	135.2	148.4	152.6	144.5	134.9	163.8	0.86	0.86	0.86	0.86	0.86	0.86	0.999378	1.000000	-
Rv0085	hycP	3	87.0	91.8	95.6	116.7	117.6	145.1	-0.128	-0.055	0.000	0.275	0.285	0.578	97.9	91.8	95.6	116.7	117.6	145.1	0.89	1.00	1.00	1.00	1.00	1.00	0.830988	1.000000	-
Rv0086	hycQ	14	108.5	112.8	104.9	108.7	99.4	99.4	0.046	0.101	0.000	0.049	-0.073	-0.074	119.9	131.6	104.9	117.0	111.3	103.1	0.90	0.86	1.00	0.93	0.89	0.96	0.429540	1.000000	-
Rv0087	hycE	22	126.6	86.2	112.9	82.0	97.2	79.1	0.159	-0.371	0.000	-0.438	-0.206	-0.486	160.7	108.3	141.9	117.7	122.2	102.4	0.79	0.80	0.80	0.70	0.80	0.77	0.721340	1.000000	-
Rv0088	-	11	97.9	65.6	70.2	65.5	74.8	60.0	0.452	-0.091	0.000	-0.094	0.085	-0.210	101.0	72.2	96.6	72.0	78.4	69.5	0.97	0.91	0.73	0.91	0.95	0.86	0.319228	1.000000	-
Rv0089	-	9	200.7	185.0	220.5	166.3	192.1	133.6	-0.133	-0.247	0.000	-0.397	-0.194	-0.702	225.7	208.1	248.1	172.7	192.1	150.3	0.89	0.89	0.89	0.96	1.00	0.89	0.610693	1.000000	-
Rv0090	-	12	219.9	163.4	193.6	215.1	188.8	161.4	0.179	-0.238	0.000	0.149	-0.035	-0.255	232.8	178.2	232.3	215.1	197.0	176.1	0.94	0.92	0.83	1.00	0.96	0.92	0.515138	1.000000	-
Rv0091	mtn	11	203.7	177.7	190.1	194.0	166.3	167.0	0.097	-0.095	0.000	0.028	-0.188	-0.182	268.9	217.2	232.4	206.5	203.3	229.7	0.76	0.82	0.82	0.94	0.82	0.73	0.702425	1.000000	-
Rv0092	ctpA	27	184.7	173.4	164.8	156.2	136.2	169.1	0.160	0.071	0.000	-0.075	-0.267	0.036	191.8	187.2	189.4	164.4	138.7	175.6	0.96	0.93	0.87	0.95	0.98	0.96	0.405986	1.000000	-
Rv0093c	-	7	233.6	206.9	237.0	193.4	207.4	193.8	-0.020	-0.192	0.000	-0.286	-0.188	-0.284	233.6	241.3	237.0	225.7	242.0	226.1	1.00	0.86	1.00	0.86	0.86	0.86	0.433685	1.000000	-
Rv0094c	-	14	194.2	194.2	209.9	200.2	187.7	213.1	-0.109	-0.110	0.000	-0.067	-0.157	0.021	226.6	209.1	235.1	247.3	219.0	229.5	0.86	0.93	0.89	0.81	0.86	0.93	0.951997	1.000000	-
Rv0095c	-	7	25.0	34.0	42.5	22.2	34.8	42.4	-0.665	-0.283	0.000	-0.803	-0.255	-0.003	52.4	53.0	66.2	51.9	40.6	84.9	0.48	0.64	0.64	0.43	0.86	0.50	0.280225	1.000000	-
Rv0096	PPE1	30	202.0	192.7	221.2	221.5	185.7	190.0	-0.128	-0.195	0.000	0.002	-0.247	-0.215	230.1	202.8	237.0	229.2	202.6	203.5	0.88	0.95	0.93	0.97	0.92	0.93	0.824154	1.000000	-
Rv0097	-	24	48.8	51.5	51.9	49.2	49.5	59.4	-0.080	-0.009	0.000	-0.069	-0.062	0.180	68.9	63.4	73.2	65.6	59.4	71.3	0.71	0.81	0.71	0.75	0.83	0.83	0.952083	1.000000	-
Rv0098	-	10	73.9	102.4	57.6	67.8	61.6	71.8	0.332	0.777	0.000	0.217	0.087	0.294	100.7	128.0	76.9	88.4	77.0	79.8	0.73	0.80	0.75	0.77	0.80	0.90	0.528373	1.000000	-
Rv0099	fadD10	30	44.4	48.4	54.2	43.5	41.1	39.4	-0.263	-0.151	0.000	-0.288	-0.363	-0.415	71.3	65.9	70.7	65.3	54.7	56.3	0.62	0.73	0.77	0.67	0.75	0.70	0.777490	1.000000	-
Rv0100	-	3	46.5	40.6	34.4	40.7	63.8	60.9	0.387	0.209	0.000	0.215	0.803	0.742	52.4	40.6	41.3	40.7	63.8	60.9	0.89	1.00	0.83	1.00	1.00	1.00	0.582267	1.000000	-
Rv0101	nrp	103	115.8	98.7	116.8	112.4	99.2	108.9	-0.012	-0.232	0.000	-0.053	-0.225	-0.096	143.1	123.2	143.2	131.0	115.5	124.6	0.81	0.80	0.82	0.86	0.86	0.87	0.629567	1.000000	-
Rv0102	-	38	4.2	6.2	2.5	2.5	2.3	6.0	0.300	0.581	0.000	0.001	-0.043	0.559	23.9	17.4	17.1	15.7	14.3	16.9	0.18	0.36	0.14	0.16	0.16	0.36	0.002861	0.049630	-
Rv0103c	ctpB	28	199.3	188.0	208.3	201.6	190.9	168.5	-0.062	-0.144	0.000	-0.046	-0.123	-0.298	217.4	188.0	216.0	206.5	201.7	181.4	0.92	1.00	0.96	0.98	0.95	0.93	0.535903	1.000000	-
Rv0104	-	25	259.0	256.9	248.4	237.8	239.1	238.5	0.059	0.047	0.000	-0.062	-0.054	-0.057	266.1	267.6	253.5	244.4	249.0	248.5	0.97	0.96	0.98	0.97	0.96	0.96	0.996427	1.000000	-
Rv0105c	rpmB	5	206.6	196.4	180.8	138.8	144.0	143.7	0.187	0.116	0.000	-0.370	-0.319	-0.321	221.3	245.5	200.9	138.8	180.0	179.7	0.93	0.80	0.90	1.00	0.80	0.80	0.483678	1.000000	-
Rv0106	-	10	142.9	117.8	113.8	109.6	105.0	115.6	0.316	0.048	0.000	-0.053	-0.111	0.021	147.9	138.6	113.8	121.8	116.7	144.5	0.97	0.85	1.00	0.90	0.90	0.80	0.301193	1.000000	-
Rv0107c	ctpI	59	132.5	120.4	130.2	127.7	128.1	113.1	0.024	-0.108	0.000	-0.026	-0.022	-0.195	151.3	145.0	149.1	155.9	142.6	132.1	0.88	0.83	0.87	0.82	0.90	0.86	0.661905	1.000000	-
Rv0108c	-	2	16.9	18.0	26.7	26.2	23.0	34.4	-0.533	-0.460	0.000	-0.024	-0.179	0.314	20.3	18.0	35.6	39.2	30.6	34.4	0.83	1.00	0.75	0.67	0.75	1.00	0.373023	1.000000	-
Rv0109	PE_PGRS1	25	94.3	59.8	75.5	79.6	79.0	71.0	0.303	-0.313	0.000	0.072	0.061	-0.084	124.1	76.7	94.4	101.2	94.0	86.5	0.76	0.78	0.80	0.79	0.84	0.82	0.850005	1.000000	-
Rv0110	-	13	342.9	328.1	346.6	339.8	300.5	300.5	-0.015	-0.078	0.000	-0.028	-0.203	-0.203	342.9	328.1	346.6	339.8	300.5	312.5	1.00	1.00	1.00	1.00	1.00	0.96	0.928403	1.000000	-
Rv0111	-	40	159.6	152.8	150.3	137.0	155.8	151.9	0.084	0.023	0.000	-0.129	0.050	0.015	180.6	156.7	171.7	141.7	166.2	164.2	0.88	0.97	0.88	0.97	0.94	0.93	0.193167	1.000000	-
Rv0112	gca	29	1.6	2.3	1.6	2.0	3.2	3.0	-0.012	0.139	0.000	0.076	0.309	0.265	19.4	19.0	18.8	21.5	26.5	17.1	0.08	0.12	0.09	0.09	0.12	0.17	0.645233	1.000000	-
Rv0113	gmhA	12	68.6	65.4	59.6	39.0	67.3	62.3	0.187	0.124	0.000	-0.554	0.162	0.058	79.6	74.8	62.2	54.0	67.3	71.2	0.86	0.88	0.96	0.72	1.00	0.88	0.039503	0.403117	-
Rv0114	gmhB	9	180.5	178.5	150.5	146.7	150.0	178.3	0.254	0.239	0.000	-0.036	-0.005	0.237	180.5	178.5	159.4	146.7	150.0	178.3	1.00	1.00	0.94	1.00	1.00	1.00	0.939990	1.000000	-
Rv0115	hddA	17	162.2	141.3	132.9	149.6	151.4	162.0	0.278	0.085	0.000	0.165	0.182	0.276	165.4	141.3	150.6	165.8	160.9	162.0	0.98	1.00	0.88	0.90	0.94	1.00	0.214114	1.000000	-
Rv0116c	-	15	114.1	116.6	113.6	98.6	113.3	124.1	0.007	0.036	0.000	-0.195	-0.004	0.122	116.7	116.6	117.5	98.6	113.3	124.1	0.98	1.00	0.97	1.00	1.00	1.00	0.762117	1.000000	-
Rv0117	oxyS	16	70.8	65.2	75.8	60.1	67.7	80.8	-0.092	-0.202	0.000	-0.311	-0.153	0.087	82.9	72.0	86.6	72.2	77.4	89.2	0.85	0.91	0.88	0.83	0.88	0.91	0.981932	1.000000	-
Rv0118c	oxcA	25	149.3	139.2	151.4	142.8	115.5	111.8	-0.020	-0.118	0.000	-0.082	-0.377	-0.421	162.3	158.2	180.3	150.9	137.5	136.4	0.92	0.88	0.84	0.95	0.84	0.82	0.343205	1.000000	-
Rv0119	fadD7	13	49.6	58.1	45.9	56.0	56.1	36.9	0.102	0.310	0.000	0.262	0.263	-0.280	66.7	88.8	70.2	66.2	76.7	48.0	0.74	0.65	0.65	0.85	0.73	0.77	0.503002	1.000000	-
Rv0120c	fusA2	25	50.7	46.9	61.4	52.7	47.3	52.9	-0.254	-0.357	0.000	-0.202	-0.345	-0.199	65.6	58.6	73.1	62.8	57.7	66.1	0.77	0.80	0.84	0.84	0.82	0.80	0.957889	1.000000	-
Rv0121c	-	10	152.6	155.4	140.6	134.3	136.8	123.7	0.114	0.140	0.000	-0.064	-0.038	-0.178	199.1	194.3	234.4	201.5	195.4	137.5	0.77	0.80	0.60	0.67	0.70	0.90	0.729062	1.000000	-
Rv0122	-	9	46.5	35.6	57.3	43.4	50.1	73.7	-0.275	-0.617	0.000	-0.363	-0.176	0.337	69.7	58.3	79.3	73.3	82.0	82.9	0.67	0.61	0.72	0.59	0.61	0.89	0.598609	1.000000	-
Rv0123	-	7	65.2	82.5	89.3	67.9	59.0	52.8	-0.426	-0.107	0.000	-0.371	-0.559	-0.705	114.0	144.4	178.6	158.5	137.7	105.7	0.57	0.57	0.50	0.43	0.43	0.50	0.820549	1.000000	-
Rv0124	PE_PGRS2	11	263.9	268.5	270.4	249.6	229.8	231.1	-0.035	-0.010	0.000	-0.113	-0.230	-0.222	290.3	295.4	297.5	257.4	252.8	231.1	0.91	0.91	0.91	0.97	0.91	1.00	0.861985	1.000000	-
Rv0125	pepA	9	179.1	162.4	191.8	146.4	137.0	163.3	-0.097	-0.233	0.000	-0.378	-0.471	-0.226	179.1	162.4	215.8	146.4	137.0	172.9	1.00	1.00	0.89	1.00	1.00	0.94	0.465224	1.000000	-
Rv0126	treS	29	137.0	189.5	125.2	177.4	189.7	134.0	0.126	0.579	0.000	0.487	0.581	0.095	159.0	207.3	151.2	195.4	200.1	155.4	0.86	0.91	0.83	0.91	0.95	0.86	0.149333	0.942781	-
Rv0127	-	27	72.3	100.8	64.0	99.3	96.3	94.6	0.164	0.618	0.000	0.596	0.554	0.530	82.4	104.7	76.8	103.1	100.0	94.6	0.88	0.96	0.83	0.96	0.96	1.00	0.001881	0.034425	-
Rv0128	-	17	278.5	251.0	269.0	258.6	256.4	268.3	0.049	-0.098	0.000	-0.056	-0.068	-0.004	278.5	251.0	269.0	258.6	256.4	268.3	1.00	1.00	1.00	1.00	1.00	1.00	0.992549	1.000000	-
Rv0129c	fbpC	27	48.5	67.7	54.3	56.0	89.0	62.0	-0.146	0.294	0.000	0.042	0.666	0.178	67.8	71.6	73.2	68.7	96.1	69.8	0.72	0.94	0.74	0.81	0.93	0.89	0.008160	0.117961	-
Rv0130	-	3	74.9	80.0	92.9	97.6	89.9	79.0	-0.294	-0.204	0.000	0.068	-0.045	-0.221	84.2	80.0	92.9	97.6	89.9	79.0	0.89	1.00	1.00	1.00	1.00	1.00	0.960986	1.000000	-
Rv0131c	fadE1	18	142.4	162.9	162.7	163.9	160.4	153.9	-0.186	0.002	0.000	0.010	-0.019	-0.078	153.8	172.5	172.2	173.5	160.4	163.0	0.93	0.94	0.94	0.94	1.00	0.94	0.848214	1.000000	-
Rv0132c	fgd2	14	162.5	173.2	175.2	182.6	157.9	176.8	-0.106	-0.016	0.000	0.058	-0.146	0.012	179.6	194.0	213.3	196.6	157.9	176.8	0.90	0.89	0.82	0.93	1.00	1.00	0.279991	1.000000	-
Rv0133	-	6	248.1	216.5	212.3	258.0	237.4	216.7	0.220	0.028	0.000	0.275	0.158	0.029	248.1	216.5	231.6	258.0	237.4	216.7	1.00	1.00	0.92	1.00	1.00	1.00	0.943004	1.000000	-
Rv0134	ephF	11	259.6	256.9	275.7	234.1	243.2	233.7	-0.085	-0.100	0.000	-0.231	-0.178	-0.234	259.6	256.9	275.7	234.1	243.2	233.7	1.00	1.00	1.00	1.00	1.00	1.00	0.968259	1.000000	-
Rv0135c	-	11	267.1	169.0	214.7	103.5	122.5	157.5	0.308	-0.336	0.000	-1.019	-0.785	-0.435	267.1	177.1	214.7	106.7	122.5	165.0	1.00	0.95	1.00	0.97	1.00	0.95	0.011265	0.150830	-
Rv0136	cyp138	22	181.2	184.9	191.7	177.5	185.4	183.7	-0.079	-0.051	0.000	-0.109	-0.047	-0.060	196.1	203.4	200.9	185.9	203.9	187.9	0.92	0.91	0.95	0.95	0.91	0.98	0.936193	1.000000	-
Rv0137c	msrA	11	60.6	64.7	67.1	52.9	74.4	75.7	-0.136	-0.048	0.000	-0.317	0.140	0.162	68.9	67.8	86.8	64.6	81.9	75.7	0.88	0.95	0.77	0.82	0.91	1.00	0.341234	1.000000	-
Rv0138	-	6	591.0	549.2	541.8	532.4	491.4	495.1	0.124	0.019	0.000	-0.025	-0.140	-0.129	591.0	549.2	541.8	532.4	491.4	495.1	1.00	1.00	1.00	1.00	1.00	1.00	0.977117	1.000000	-
Rv0139	-	12	411.9	361.4	398.8	406.7	362.6	336.7	0.046	-0.140	0.000	0.028	-0.135	-0.241	449.4	361.4	398.8	406.7	362.6	336.7	0.92	1.00	1.00	1.00	1.00	1.00	0.484424	1.000000	-
Rv0140	-	15	123.4	115.6	118.6	114.5	119.6	127.1	0.056	-0.035	0.000	-0.049	0.012	0.096	129.2	123.8	136.8	117.1	128.1	136.1	0.96	0.93	0.87	0.98	0.93	0.93	0.891350	1.000000	-
Rv0141c	-	8	183.0	204.0	204.9	189.0	185.1	175.6	-0.159	-0.006	0.000	-0.114	-0.143	-0.216	183.0	233.1	204.9	189.0	185.1	200.7	1.00	0.88	1.00	1.00	1.00	0.88	0.219054	1.000000	-
Rv0142	-	5	433.1	377.3	348.1	355.4	373.9	258.7	0.311	0.115	0.000	0.030	0.102	-0.421	464.0	377.3	348.1	380.8	373.9	323.4	0.93	1.00	1.00	0.93	1.00	0.80	0.699674	1.000000	-
Rv0143c	-	25	179.4	156.0	181.4	150.8	176.3	179.6	-0.015	-0.211	0.000	-0.259	-0.040	-0.014	189.5	162.5	188.9	159.3	176.3	195.2	0.95	0.96	0.96	0.95	1.00	0.92	0.597929	1.000000	-
Rv0144	-	14	112.4	131.0	95.9	107.5	98.0	118.8	0.219	0.431	0.000	0.158	0.031	0.296	147.5	166.7	127.8	145.7	119.3	151.2	0.76	0.79	0.75	0.74	0.82	0.79	0.994651	1.000000	-
Rv0145	-	14	313.7	273.4	251.0	268.8	238.3	250.1	0.316	0.121	0.000	0.097	-0.074	-0.005	337.9	306.2	281.2	268.8	256.6	269.4	0.93	0.89	0.89	1.00	0.93	0.93	0.696987	1.000000	-
Rv0146	-	15	375.2	357.1	322.7	320.7	326.7	321.5	0.214	0.144	0.000	-0.009	0.018	-0.005	383.8	357.1	322.7	343.6	326.7	321.5	0.98	1.00	1.00	0.93	1.00	1.00	0.596191	1.000000	-
Rv0147	-	23	278.0	272.9	257.5	250.9	268.1	287.2	0.109	0.082	0.000	-0.037	0.057	0.155	286.3	285.3	275.4	262.3	280.2	307.2	0.97	0.96	0.93	0.96	0.96	0.93	0.973877	1.000000	-
Rv0148	-	15	285.3	297.7	251.6	254.0	234.9	253.1	0.178	0.238	0.000	0.013	-0.097	0.009	291.8	297.7	260.3	254.0	234.9	253.1	0.98	1.00	0.97	1.00	1.00	1.00	0.890565	1.000000	-
Rv0149	-	19	179.8	181.6	185.6	175.3	166.7	172.9	-0.045	-0.031	0.000	-0.081	-0.151	-0.100	186.3	197.1	195.9	175.3	166.7	187.7	0.96	0.92	0.95	1.00	1.00	0.92	0.412637	1.000000	-
Rv0150c	-	4	11.8	23.0	21.2	13.8	18.5	28.4	-0.643	0.094	0.000	-0.484	-0.160	0.348	35.4	30.7	42.5	27.5	49.3	37.9	0.33	0.75	0.50	0.50	0.38	0.75	0.631332	1.000000	-
Rv0151c	PE1	40	120.4	128.7	110.1	115.0	121.1	136.0	0.124	0.217	0.000	0.061	0.132	0.293	127.8	137.3	124.0	130.2	125.8	137.7	0.94	0.94	0.89	0.88	0.96	0.99	0.173141	1.000000	-
Rv0152c	PE2	35	173.7	173.2	170.5	176.0	170.8	191.6	0.026	0.022	0.000	0.045	0.002	0.164	207.2	202.0	217.0	207.7	196.0	223.5	0.84	0.86	0.79	0.85	0.87	0.86	0.994124	1.000000	-
Rv0153c	ptbB	11	114.1	177.3	78.4	214.1	194.7	141.9	0.514	1.128	0.000	1.393	1.259	0.816	114.1	177.3	86.3	214.1	203.9	141.9	1.00	1.00	0.91	1.00	0.95	1.00	0.000015	0.000454	-
Rv0154c	fadE2	11	124.5	162.7	117.2	160.8	173.6	153.1	0.084	0.457	0.000	0.441	0.548	0.372	137.0	162.7	128.9	176.9	191.0	168.4	0.91	1.00	0.91	0.91	0.91	0.91	0.485257	1.000000	-
Rv0155	pntAa	10	392.8	395.8	402.5	425.1	407.1	303.0	-0.035	-0.024	0.000	0.078	0.016	-0.404	420.8	439.8	447.2	472.3	428.5	303.0	0.93	0.90	0.90	0.90	0.95	1.00	0.860139	1.000000	-
Rv0156	pntAb	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0157	pntB	10	239.6	251.9	230.6	224.2	247.9	299.4	0.054	0.125	0.000	-0.040	0.102	0.370	256.7	279.9	271.3	240.2	247.9	332.6	0.93	0.90	0.85	0.93	1.00	0.90	0.725129	1.000000	-
Rv0158	-	15	247.9	279.3	213.6	238.4	233.7	277.0	0.211	0.379	0.000	0.155	0.127	0.368	293.6	279.3	237.3	243.8	233.7	277.0	0.84	1.00	0.90	0.98	1.00	1.00	0.058140	0.524836	-
Rv0159c	PE3	48	221.2	221.0	228.6	204.0	200.4	212.2	-0.047	-0.048	0.000	-0.161	-0.186	-0.105	237.7	238.4	258.2	220.9	209.2	223.9	0.93	0.93	0.89	0.92	0.96	0.95	0.937117	1.000000	-
Rv0160c	PE4	41	176.8	166.1	163.4	168.1	164.6	179.9	0.110	0.023	0.000	0.040	0.010	0.135	205.1	174.6	186.1	193.2	177.6	194.1	0.86	0.95	0.88	0.87	0.93	0.93	0.779550	1.000000	-
Rv0161	-	16	119.2	101.0	98.0	111.7	106.5	105.7	0.270	0.041	0.000	0.180	0.115	0.103	173.5	140.5	136.4	127.7	126.3	130.1	0.69	0.72	0.72	0.88	0.84	0.81	0.669941	1.000000	-
Rv0162c	adhE1	15	71.3	85.0	100.7	91.5	83.6	110.8	-0.470	-0.232	0.000	-0.130	-0.253	0.132	82.2	94.4	125.8	111.3	96.5	110.8	0.87	0.90	0.80	0.82	0.87	1.00	0.163942	0.993726	-
Rv0163	-	9	184.8	165.7	177.3	171.2	187.0	191.4	0.059	-0.095	0.000	-0.049	0.075	0.108	199.6	165.7	177.3	177.8	187.0	191.4	0.93	1.00	1.00	0.96	1.00	1.00	0.835645	1.000000	-
Rv0164	TB18.5	8	54.7	50.9	55.3	51.1	58.2	70.9	-0.013	-0.108	0.000	-0.104	0.069	0.333	437.8	407.5	442.2	408.8	465.8	567.4	0.12	0.12	0.12	0.12	0.12	0.12	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0165c	-	6	180.4	136.2	160.5	169.8	181.9	119.0	0.164	-0.229	0.000	0.079	0.175	-0.417	180.4	148.6	175.1	179.8	181.9	119.0	1.00	0.92	0.92	0.94	1.00	1.00	0.767535	1.000000	-
Rv0166	fadD5	23	178.6	178.1	172.4	170.8	163.3	166.9	0.049	0.045	0.000	-0.013	-0.076	-0.046	186.7	182.0	193.4	181.3	170.7	174.5	0.96	0.98	0.89	0.94	0.96	0.96	0.977775	1.000000	-
Rv0167	yrbE1A	6	122.6	131.4	95.7	107.9	86.3	127.1	0.342	0.439	0.000	0.165	-0.141	0.392	137.9	131.4	127.6	114.2	129.5	127.1	0.89	1.00	0.75	0.94	0.67	1.00	0.258582	1.000000	-
Rv0168	yrbE1B	13	99.5	120.3	72.9	111.6	102.9	123.1	0.424	0.687	0.000	0.583	0.471	0.718	102.1	120.3	78.9	117.7	102.9	133.3	0.97	1.00	0.92	0.95	1.00	0.92	0.214602	1.000000	-
Rv0169	mce1A	33	71.3	95.3	68.7	86.0	83.4	104.9	0.050	0.444	0.000	0.304	0.262	0.576	96.7	106.6	103.1	110.6	105.9	119.4	0.74	0.89	0.67	0.78	0.79	0.88	0.140095	0.912113	-
Rv0170	mce1B	16	188.4	231.1	170.2	175.3	196.0	255.3	0.143	0.431	0.000	0.042	0.199	0.571	226.1	255.0	194.5	200.4	216.3	272.3	0.83	0.91	0.88	0.88	0.91	0.94	0.762300	1.000000	-
Rv0171	mce1C	23	183.3	253.4	159.1	194.4	223.7	238.6	0.199	0.655	0.000	0.281	0.479	0.570	183.3	253.4	159.1	194.4	223.7	238.6	1.00	1.00	1.00	1.00	1.00	1.00	0.018959	0.226487	-
Rv0172	mce1D	31	88.3	115.3	87.1	95.3	105.2	134.1	0.018	0.385	0.000	0.123	0.258	0.595	108.0	129.9	103.8	116.6	120.7	151.2	0.82	0.89	0.84	0.82	0.87	0.89	0.249675	1.000000	-
Rv0173	lprK	15	206.4	222.2	180.5	216.7	206.3	259.5	0.189	0.293	0.000	0.258	0.188	0.512	216.0	238.1	186.7	216.7	221.0	278.1	0.96	0.93	0.97	1.00	0.93	0.93	0.373907	1.000000	-
Rv0174	mce1F	28	139.4	212.5	129.6	157.1	173.5	210.6	0.102	0.692	0.000	0.268	0.408	0.680	146.4	220.4	139.6	162.9	173.5	218.4	0.95	0.96	0.93	0.96	1.00	0.96	0.002476	0.044101	-
Rv0175	-	8	176.9	230.8	118.2	171.6	190.1	217.4	0.562	0.936	0.000	0.519	0.663	0.852	212.2	230.8	118.2	179.0	190.1	248.4	0.83	1.00	1.00	0.96	1.00	0.88	0.089290	0.696425	-
Rv0176	-	15	219.1	265.7	202.3	244.2	242.7	281.1	0.112	0.385	0.000	0.265	0.256	0.465	240.5	265.7	233.5	244.2	260.0	281.1	0.91	1.00	0.87	1.00	0.93	1.00	0.102385	0.747565	-
Rv0177	-	11	30.4	43.7	20.8	26.9	34.2	42.6	0.457	0.916	0.000	0.304	0.604	0.883	71.7	68.6	45.8	52.1	53.8	58.6	0.42	0.64	0.45	0.52	0.64	0.73	0.764494	1.000000	-
Rv0178	-	11	150.8	130.5	85.4	107.6	135.5	132.9	0.785	0.584	0.000	0.317	0.636	0.610	171.6	130.5	104.4	126.9	135.5	132.9	0.88	1.00	0.82	0.85	1.00	1.00	0.111020	0.784724	-
Rv0179c	lprO	22	225.3	185.4	205.0	198.4	188.2	191.1	0.133	-0.141	0.000	-0.046	-0.120	-0.099	228.8	185.4	209.8	198.4	192.6	191.1	0.98	1.00	0.98	1.00	0.98	1.00	0.913460	1.000000	-
Rv0180c	-	27	41.5	43.2	37.7	41.5	49.4	45.3	0.124	0.175	0.000	0.124	0.351	0.236	73.1	70.7	75.4	80.1	83.4	55.5	0.57	0.61	0.50	0.52	0.59	0.81	0.073481	0.618541	-
Rv0181c	-	14	144.7	159.5	148.7	152.1	149.7	147.0	-0.038	0.098	0.000	0.032	0.010	-0.016	155.8	159.5	148.7	159.7	155.3	147.0	0.93	1.00	1.00	0.95	0.96	1.00	0.672492	1.000000	-
Rv0182c	sigG	19	190.7	189.5	178.8	160.0	175.3	178.9	0.091	0.082	0.000	-0.155	-0.028	0.001	194.1	194.7	183.6	160.0	175.3	178.9	0.98	0.97	0.97	1.00	1.00	1.00	0.856640	1.000000	-
Rv0183	-	14	291.0	260.3	270.6	248.1	218.8	251.5	0.103	-0.055	0.000	-0.123	-0.301	-0.103	291.0	260.3	270.6	248.1	218.8	251.5	1.00	1.00	1.00	1.00	1.00	1.00	0.673720	1.000000	-
Rv0184	-	11	199.8	227.7	204.5	242.6	223.0	221.5	-0.033	0.152	0.000	0.241	0.122	0.113	212.7	227.7	214.3	266.9	245.3	270.8	0.94	1.00	0.95	0.91	0.91	0.82	0.434668	1.000000	-
Rv0185	-	9	129.3	137.9	123.7	118.5	134.5	137.9	0.061	0.151	0.000	-0.060	0.116	0.151	174.5	177.3	171.2	177.7	201.7	190.9	0.74	0.78	0.72	0.67	0.67	0.72	0.985798	1.000000	-
Rv0186	bglS	32	119.0	121.0	127.2	109.5	110.7	126.4	-0.092	-0.070	0.000	-0.207	-0.193	-0.009	141.1	129.0	135.7	119.5	120.0	132.6	0.84	0.94	0.94	0.92	0.92	0.95	0.705910	1.000000	-
Rv0187	-	7	315.9	334.1	315.7	280.1	246.1	222.6	0.001	0.080	0.000	-0.170	-0.353	-0.495	315.9	334.1	315.7	326.8	265.0	239.7	1.00	1.00	1.00	0.86	0.93	0.93	0.452803	1.000000	-
Rv0188	-	8	271.5	204.2	222.6	216.0	221.6	233.5	0.280	-0.122	0.000	-0.043	-0.007	0.067	296.1	204.2	254.4	216.0	221.6	233.5	0.92	1.00	0.88	1.00	1.00	1.00	0.764258	1.000000	-
Rv0189c	ilvD	18	7.7	3.7	8.9	0.8	0.0	10.2	-0.130	-0.677	0.000	-1.272	-1.480	0.124	34.8	26.8	107.4	13.9	0.0	36.7	0.22	0.14	0.08	0.06	0.00	0.28	0.000750	0.015428	-
Rv0190	-	3	504.0	654.1	406.2	681.9	450.1	536.8	0.308	0.681	0.000	0.740	0.146	0.398	504.0	654.1	406.2	681.9	450.1	536.8	1.00	1.00	1.00	1.00	1.00	1.00	0.853017	1.000000	-
Rv0191	-	17	480.6	427.0	447.8	421.8	423.7	403.5	0.101	-0.068	0.000	-0.085	-0.079	-0.148	532.8	468.3	507.5	488.9	480.2	403.5	0.90	0.91	0.88	0.86	0.88	1.00	0.596336	1.000000	-
Rv0192	-	11	262.4	247.2	278.0	215.4	257.0	273.0	-0.082	-0.166	0.000	-0.361	-0.112	-0.026	270.6	247.2	278.0	215.4	257.0	273.0	0.97	1.00	1.00	1.00	1.00	1.00	0.845288	1.000000	-
Rv0192A	-	2	321.3	250.2	332.3	282.2	256.3	298.9	-0.048	-0.402	0.000	-0.232	-0.369	-0.150	321.3	250.2	332.3	282.2	256.3	298.9	1.00	1.00	1.00	1.00	1.00	1.00	0.285834	1.000000	-
Rv0193c	-	31	241.2	253.5	243.9	247.2	246.0	261.1	-0.016	0.055	0.000	0.019	0.012	0.097	249.2	253.5	243.9	247.2	246.0	261.1	0.97	1.00	1.00	1.00	1.00	1.00	0.401657	1.000000	-
Rv0194	-	48	343.1	351.2	350.0	333.1	309.3	320.3	-0.028	0.005	0.000	-0.070	-0.175	-0.126	350.4	358.7	365.2	340.2	319.3	327.1	0.98	0.98	0.96	0.98	0.97	0.98	0.996611	1.000000	-
Rv0195	-	6	416.8	400.4	378.4	360.1	367.4	384.4	0.138	0.080	0.000	-0.071	-0.042	0.022	416.8	400.4	378.4	360.1	367.4	384.4	1.00	1.00	1.00	1.00	1.00	1.00	0.999005	1.000000	-
Rv0196	-	7	254.8	250.1	213.8	222.8	222.0	234.5	0.248	0.222	0.000	0.058	0.053	0.131	254.8	250.1	230.3	222.8	222.0	234.5	1.00	1.00	0.93	1.00	1.00	1.00	0.938631	1.000000	-
Rv0197	-	30	149.4	121.4	148.3	115.9	124.5	119.4	0.010	-0.279	0.000	-0.343	-0.244	-0.302	154.6	125.5	158.9	119.9	128.8	123.5	0.97	0.97	0.93	0.97	0.97	0.97	0.666890	1.000000	-
Rv0198c	-	39	71.2	63.9	65.1	68.2	74.3	80.2	0.120	-0.026	0.000	0.062	0.178	0.281	78.6	80.4	79.4	82.3	84.0	93.4	0.91	0.79	0.82	0.83	0.88	0.86	0.181302	1.000000	-
Rv0199	-	12	17.2	19.5	14.6	32.1	23.4	25.4	0.176	0.320	0.000	0.920	0.533	0.633	36.3	42.5	43.9	68.0	80.2	40.7	0.47	0.46	0.33	0.47	0.29	0.62	0.136350	0.899231	-
Rv0200	-	7	105.3	134.3	90.4	209.3	179.5	116.6	0.209	0.547	0.000	1.168	0.952	0.350	130.0	188.0	126.5	293.0	251.3	163.2	0.81	0.71	0.71	0.71	0.71	0.71	0.192020	1.000000	-
Rv0201c	-	7	94.5	136.2	106.8	126.3	109.8	133.8	-0.168	0.337	0.000	0.233	0.039	0.313	94.5	136.2	106.8	126.3	109.8	133.8	1.00	1.00	1.00	1.00	1.00	1.00	0.495757	1.000000	-
Rv0202c	mmpL11	36	10.6	19.9	61.1	163.8	167.2	14.2	-2.088	-1.408	0.000	1.352	1.381	-1.785	47.5	51.2	81.5	168.5	172.0	42.6	0.22	0.39	0.75	0.97	0.97	0.33	0.000000	0.000000	-
Rv0203	-	3	328.0	377.1	384.8	310.7	320.2	348.5	-0.227	-0.029	0.000	-0.304	-0.261	-0.141	328.0	377.1	384.8	310.7	320.2	348.5	1.00	1.00	1.00	1.00	1.00	1.00	0.829135	1.000000	-
Rv0204c	-	19	92.9	156.6	139.0	127.6	173.2	108.2	-0.557	0.166	0.000	-0.120	0.307	-0.347	103.8	156.6	146.7	139.8	173.2	111.2	0.89	1.00	0.95	0.91	1.00	0.97	0.013911	0.179052	-
Rv0205	-	12	238.8	196.8	199.4	203.5	205.3	237.6	0.254	-0.018	0.000	0.029	0.041	0.248	268.7	224.9	208.1	209.3	205.3	248.0	0.89	0.88	0.96	0.97	1.00	0.96	0.609485	1.000000	-
Rv0206c	mmpL3	27	2.3	1.3	1.0	2.2	1.6	1.1	0.270	0.068	0.000	0.259	0.136	0.014	61.6	36.0	28.1	60.1	44.2	29.7	0.04	0.04	0.04	0.04	0.04	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0207c	-	9	96.9	129.1	85.6	139.2	109.7	94.7	0.170	0.566	0.000	0.670	0.340	0.139	174.5	154.9	154.1	197.7	164.5	131.2	0.56	0.83	0.56	0.70	0.67	0.72	0.905368	1.000000	-
Rv0208c	trmB	10	113.2	95.6	87.7	88.3	82.5	98.3	0.351	0.119	0.000	0.010	-0.082	0.157	141.5	106.3	134.9	101.9	97.1	115.7	0.80	0.90	0.65	0.87	0.85	0.85	0.858847	1.000000	-
Rv0209	-	14	238.3	251.8	263.5	270.0	221.2	233.7	-0.142	-0.065	0.000	0.035	-0.247	-0.170	270.6	261.1	273.3	276.6	221.2	233.7	0.88	0.96	0.96	0.98	1.00	1.00	0.533953	1.000000	-
Rv0210	-	12	528.4	491.7	492.9	482.6	513.0	479.2	0.099	-0.004	0.000	-0.030	0.057	-0.040	656.0	561.9	563.3	526.4	586.3	500.1	0.81	0.88	0.88	0.92	0.88	0.96	0.956820	1.000000	-
Rv0211	pckA	22	92.9	124.4	66.3	199.1	228.3	111.7	0.457	0.860	0.000	1.517	1.710	0.711	136.3	133.5	116.7	219.0	245.0	119.9	0.68	0.93	0.57	0.91	0.93	0.93	0.000000	0.000002	-
Rv0212c	nadR	6	135.7	146.7	123.7	132.5	134.1	119.7	0.129	0.237	0.000	0.096	0.112	-0.046	143.7	146.7	123.7	140.3	146.3	119.7	0.94	1.00	1.00	0.94	0.92	1.00	0.919892	1.000000	-
Rv0213c	-	29	99.9	102.8	85.1	96.1	96.7	108.0	0.219	0.259	0.000	0.166	0.174	0.326	126.0	126.9	114.8	121.2	116.8	125.3	0.79	0.81	0.74	0.79	0.83	0.86	0.994323	1.000000	-
Rv0214	fadD4	31	144.1	128.9	122.0	131.0	138.8	141.2	0.232	0.077	0.000	0.099	0.179	0.203	155.8	133.2	137.5	135.3	148.4	150.9	0.92	0.97	0.89	0.97	0.94	0.94	0.701442	1.000000	-
Rv0215c	fadE3	14	158.0	149.0	161.0	166.0	164.8	179.7	-0.026	-0.108	0.000	0.043	0.032	0.154	179.4	160.5	173.4	178.8	177.5	193.5	0.88	0.93	0.93	0.93	0.93	0.93	0.999242	1.000000	-
Rv0216	-	19	93.5	81.4	77.2	69.3	80.0	71.3	0.261	0.072	0.000	-0.146	0.047	-0.108	133.3	96.7	88.9	80.6	86.8	71.3	0.70	0.84	0.87	0.86	0.92	1.00	0.002139	0.038449	-
Rv0217c	lipW	19	196.6	194.3	180.2	174.9	168.1	165.3	0.122	0.106	0.000	-0.042	-0.098	-0.121	228.7	205.1	195.6	178.0	172.6	174.5	0.86	0.95	0.92	0.98	0.97	0.95	0.505466	1.000000	-
Rv0218	-	18	85.1	60.6	67.1	62.1	58.7	69.5	0.321	-0.138	0.000	-0.104	-0.179	0.046	106.9	68.1	75.5	76.2	66.1	73.6	0.80	0.89	0.89	0.81	0.89	0.94	0.296510	1.000000	-
Rv0219	-	11	203.6	150.6	163.2	147.3	156.4	159.1	0.311	-0.112	0.000	-0.143	-0.059	-0.036	216.7	157.8	163.2	156.8	156.4	175.0	0.94	0.95	1.00	0.94	1.00	0.91	0.527608	1.000000	-
Rv0220	lipC	22	94.0	104.8	109.3	112.5	89.8	107.4	-0.207	-0.057	0.000	0.040	-0.270	-0.023	121.7	121.4	129.9	123.7	106.8	115.3	0.77	0.86	0.84	0.91	0.84	0.93	0.784163	1.000000	-
Rv0221	-	25	177.5	155.8	180.6	153.6	152.0	162.8	-0.024	-0.207	0.000	-0.227	-0.241	-0.146	195.8	169.3	200.6	174.6	161.7	169.6	0.91	0.92	0.90	0.88	0.94	0.96	0.943842	1.000000	-
Rv0222	echA1	8	72.6	67.9	85.2	69.2	72.2	76.0	-0.217	-0.307	0.000	-0.282	-0.225	-0.156	79.2	67.9	90.9	69.2	72.2	81.0	0.92	1.00	0.94	1.00	1.00	0.94	0.732863	1.000000	-
Rv0223c	-	22	64.3	73.8	63.1	54.3	62.5	69.4	0.025	0.211	0.000	-0.200	-0.012	0.128	81.6	95.5	79.3	74.6	72.4	76.3	0.79	0.77	0.80	0.73	0.86	0.91	0.579818	1.000000	-
Rv0224c	-	14	0.0	0.0	0.0	0.3	0.0	0.0	0.000	0.000	0.000	0.087	0.000	0.000	0.0	0.0	0.0	13.0	0.0	0.0	0.00	0.00	0.00	0.02	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0225	-	20	0.0	0.0	0.8	0.0	0.0	0.0	-0.208	-0.208	0.000	-0.208	-0.208	-0.208	0.0	0.0	31.0	0.0	0.0	0.0	0.00	0.00	0.03	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0226c	-	23	0.0	0.2	0.0	0.4	0.6	0.2	0.000	0.061	0.000	0.117	0.160	0.066	0.0	10.0	0.0	14.6	27.0	10.8	0.00	0.02	0.00	0.03	0.02	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0227c	-	21	0.0	0.0	0.0	0.0	0.7	0.0	0.000	0.000	0.000	0.000	0.187	0.000	0.0	0.0	0.0	0.0	14.5	0.0	0.00	0.00	0.00	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0228	-	13	0.0	0.8	0.0	0.0	0.6	0.4	0.000	0.206	0.000	0.000	0.153	0.115	0.0	10.0	0.0	0.0	14.5	10.8	0.00	0.08	0.00	0.00	0.04	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0229c	-	16	108.7	101.0	86.9	95.7	95.4	121.1	0.307	0.206	0.000	0.132	0.127	0.456	130.4	107.8	107.0	109.4	109.0	129.2	0.83	0.94	0.81	0.88	0.88	0.94	0.908499	1.000000	-
Rv0230c	php	13	348.3	334.4	326.2	304.0	314.3	328.8	0.093	0.035	0.000	-0.100	-0.053	0.011	367.2	378.0	326.2	312.0	340.5	356.3	0.95	0.88	1.00	0.97	0.92	0.92	0.684980	1.000000	-
Rv0231	fadE4	33	150.5	171.1	155.7	147.5	160.8	166.1	-0.047	0.132	0.000	-0.075	0.046	0.091	158.5	171.1	163.1	150.6	160.8	166.1	0.95	1.00	0.95	0.98	1.00	1.00	0.198176	1.000000	-
Rv0232	-	9	346.9	323.8	344.1	317.8	318.5	314.2	0.012	-0.086	0.000	-0.113	-0.110	-0.129	346.9	323.8	344.1	317.8	318.5	314.2	1.00	1.00	1.00	1.00	1.00	1.00	0.997770	1.000000	-
Rv0233	nrdB	11	158.4	149.7	156.4	157.9	172.9	174.6	0.017	-0.062	0.000	0.013	0.140	0.154	158.4	149.7	172.1	157.9	172.9	174.6	1.00	1.00	0.91	1.00	1.00	1.00	0.626018	1.000000	-
Rv0234c	gabD1	19	79.8	87.3	73.3	74.3	72.1	73.9	0.116	0.238	0.000	0.019	-0.021	0.012	119.7	107.0	111.3	108.6	94.5	108.0	0.67	0.82	0.66	0.68	0.76	0.68	0.969370	1.000000	-
Rv0235c	-	22	53.1	55.2	67.0	48.2	58.9	55.6	-0.309	-0.259	0.000	-0.437	-0.173	-0.249	66.2	60.7	77.6	61.2	61.7	64.4	0.80	0.91	0.86	0.79	0.95	0.86	0.399484	1.000000	-
Rv0236c	-	34	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0236A	-	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0237	lpqI	12	177.4	179.4	145.8	169.0	145.8	136.9	0.274	0.290	0.000	0.206	-0.000	-0.088	212.8	215.3	159.1	202.8	159.0	156.4	0.83	0.83	0.92	0.83	0.92	0.88	0.915683	1.000000	-
Rv0238	-	11	126.3	138.3	99.1	358.8	359.9	168.4	0.336	0.462	0.000	1.805	1.810	0.736	198.5	169.1	128.2	438.5	416.7	205.8	0.64	0.82	0.77	0.82	0.86	0.82	0.000001	0.000040	-
Rv0239	-	2	139.3	117.3	147.1	129.9	120.9	134.2	-0.076	-0.315	0.000	-0.173	-0.273	-0.128	139.3	117.3	147.1	129.9	120.9	134.2	1.00	1.00	1.00	1.00	1.00	1.00	0.994584	1.000000	-
Rv0240	-	6	202.4	255.4	264.2	223.2	204.1	252.6	-0.376	-0.048	0.000	-0.238	-0.365	-0.063	202.4	255.4	264.2	223.2	204.1	252.6	1.00	1.00	1.00	1.00	1.00	1.00	0.750739	1.000000	-
Rv0241c	-	13	48.3	74.7	60.1	46.7	57.7	47.1	-0.288	0.291	0.000	-0.332	-0.055	-0.323	85.7	92.4	92.0	50.6	78.9	64.4	0.56	0.81	0.65	0.92	0.73	0.73	0.010153	0.140180	-
Rv0242c	fabG	11	45.9	83.4	75.3	58.3	59.7	48.4	-0.659	0.138	0.000	-0.344	-0.312	-0.589	63.1	91.8	87.2	64.1	73.0	50.7	0.73	0.91	0.86	0.91	0.82	0.95	0.161806	0.985656	-
Rv0243	fadA2	18	89.8	99.8	105.0	59.6	78.6	65.5	-0.214	-0.069	0.000	-0.768	-0.396	-0.641	101.0	108.9	111.1	64.4	78.6	69.4	0.89	0.92	0.94	0.93	1.00	0.94	0.040425	0.409380	-
Rv0244c	fadE5	21	297.5	257.3	250.6	213.4	220.9	250.8	0.243	0.037	0.000	-0.227	-0.178	0.001	297.5	257.3	250.6	213.4	220.9	250.8	1.00	1.00	1.00	1.00	1.00	1.00	0.382169	1.000000	-
Rv0245	-	4	124.4	253.5	103.2	139.7	162.5	215.9	0.257	1.256	0.000	0.419	0.630	1.029	124.4	253.5	103.2	139.7	162.5	215.9	1.00	1.00	1.00	1.00	1.00	1.00	0.089067	0.696425	-
Rv0246	-	29	78.3	79.9	79.5	74.2	67.1	89.7	-0.020	0.007	0.000	-0.093	-0.229	0.165	109.9	94.5	107.2	107.6	79.4	102.0	0.71	0.84	0.74	0.69	0.84	0.88	0.275560	1.000000	-
Rv0247c	-	9	55.5	52.6	56.9	42.6	47.3	53.1	-0.034	-0.105	0.000	-0.380	-0.243	-0.091	78.8	72.8	78.8	54.7	53.2	56.2	0.70	0.72	0.72	0.78	0.89	0.94	0.550478	1.000000	-
Rv0248c	sdhA	33	121.5	108.8	101.7	103.5	100.6	102.4	0.245	0.093	0.000	0.024	-0.015	0.009	129.3	117.8	111.9	105.7	102.1	105.6	0.94	0.92	0.91	0.98	0.98	0.97	0.468824	1.000000	-
Rv0249c	-	22	97.6	92.4	90.2	80.8	74.6	91.4	0.107	0.032	0.000	-0.151	-0.259	0.017	99.1	104.3	99.3	84.6	84.2	95.8	0.98	0.89	0.91	0.95	0.89	0.95	0.306001	1.000000	-
Rv0250c	-	3	74.8	71.1	50.1	55.6	89.7	122.1	0.534	0.467	0.000	0.138	0.782	1.206	74.8	71.1	60.1	55.6	89.7	122.1	1.00	1.00	0.83	1.00	1.00	1.00	0.354958	1.000000	-
Rv0251c	hsp	5	447.0	323.1	365.5	349.5	316.7	319.0	0.287	-0.175	0.000	-0.064	-0.204	-0.194	479.0	403.9	406.1	349.5	316.7	319.0	0.93	0.80	0.90	1.00	1.00	1.00	0.809401	1.000000	-
Rv0252	nirB	38	134.8	134.1	144.1	142.7	142.9	123.5	-0.093	-0.099	0.000	-0.013	-0.011	-0.214	149.2	141.6	156.4	152.0	157.4	138.0	0.90	0.95	0.92	0.94	0.91	0.89	0.925276	1.000000	-
Rv0253	nirD	6	96.8	76.2	74.4	96.5	69.8	94.6	0.359	0.034	0.000	0.356	-0.085	0.328	96.8	83.2	74.4	96.5	83.8	94.6	1.00	0.92	1.00	1.00	0.83	1.00	0.391291	1.000000	-
Rv0254c	cobU	5	271.3	244.7	290.7	241.8	263.3	267.4	-0.098	-0.244	0.000	-0.261	-0.140	-0.119	271.3	244.7	290.7	241.8	263.3	267.4	1.00	1.00	1.00	1.00	1.00	1.00	0.987146	1.000000	-
Rv0255c	cobQ1	13	236.7	202.8	214.6	216.8	215.4	192.5	0.139	-0.080	0.000	0.014	0.006	-0.153	256.5	219.7	232.5	234.8	215.4	208.6	0.92	0.92	0.92	0.92	1.00	0.92	0.952419	1.000000	-
Rv0256c	PPE2	30	142.2	141.1	154.7	231.4	206.4	128.6	-0.118	-0.128	0.000	0.566	0.404	-0.257	166.2	159.8	171.9	254.0	217.2	140.3	0.86	0.88	0.90	0.91	0.95	0.92	0.023231	0.264834	-
Rv0257	-	3	276.4	303.2	257.1	297.9	290.0	205.2	0.103	0.234	0.000	0.209	0.170	-0.319	276.4	303.2	257.1	297.9	290.0	205.2	1.00	1.00	1.00	1.00	1.00	1.00	0.759735	1.000000	-
Rv0258c	-	6	76.5	58.8	69.2	42.1	75.8	74.7	0.135	-0.218	0.000	-0.656	0.122	0.104	114.7	70.5	118.6	50.5	90.9	89.7	0.67	0.83	0.58	0.83	0.83	0.83	0.348983	1.000000	-
Rv0259c	-	7	90.9	96.1	59.0	77.4	86.9	81.6	0.584	0.660	0.000	0.365	0.522	0.436	106.0	122.3	75.1	90.3	121.6	114.2	0.86	0.79	0.79	0.86	0.71	0.71	0.613844	1.000000	-
Rv0260c	-	18	101.9	114.1	107.6	100.2	87.2	94.4	-0.075	0.080	0.000	-0.099	-0.288	-0.181	144.8	146.7	138.4	117.6	101.3	106.2	0.70	0.78	0.78	0.85	0.86	0.89	0.585250	1.000000	-
Rv0261c	narK3	22	124.4	99.7	125.9	106.6	109.5	110.5	-0.016	-0.322	0.000	-0.230	-0.193	-0.180	139.1	109.6	131.9	121.3	120.4	124.7	0.89	0.91	0.95	0.88	0.91	0.89	0.898018	1.000000	-
Rv0262c	aac	6	148.3	129.6	147.3	153.1	132.1	120.2	0.009	-0.178	0.000	0.054	-0.151	-0.283	148.3	129.6	176.7	153.1	132.1	120.2	1.00	1.00	0.83	1.00	1.00	1.00	0.425638	1.000000	-
Rv0263c	-	15	67.7	80.7	77.3	56.3	73.7	78.3	-0.180	0.057	0.000	-0.425	-0.066	0.016	89.6	96.8	85.9	79.2	81.8	87.0	0.76	0.83	0.90	0.71	0.90	0.90	0.534946	1.000000	-
Rv0264c	-	9	178.3	143.3	181.3	166.0	170.0	134.5	-0.023	-0.329	0.000	-0.123	-0.091	-0.417	185.2	161.2	181.3	166.0	170.0	151.3	0.96	0.89	1.00	1.00	1.00	0.89	0.463024	1.000000	-
Rv0265c	-	9	169.4	194.8	143.1	179.4	178.0	177.0	0.236	0.433	0.000	0.316	0.306	0.298	169.4	194.8	143.1	179.4	178.0	177.0	1.00	1.00	1.00	1.00	1.00	1.00	0.860411	1.000000	-
Rv0266c	oplA	37	280.0	258.5	257.8	246.2	246.3	251.8	0.117	0.004	0.000	-0.065	-0.065	-0.034	298.8	273.3	276.5	253.0	253.1	266.2	0.94	0.95	0.93	0.97	0.97	0.95	0.957253	1.000000	-
Rv0267	narU	11	192.8	185.0	172.3	168.5	171.5	206.3	0.157	0.099	0.000	-0.031	-0.007	0.253	219.4	185.0	172.3	168.5	171.5	206.3	0.88	1.00	1.00	1.00	1.00	1.00	0.187994	1.000000	-
Rv0268c	-	12	354.9	354.2	347.0	353.4	325.5	355.7	0.032	0.029	0.000	0.026	-0.091	0.035	354.9	354.2	347.0	353.4	325.5	355.7	1.00	1.00	1.00	1.00	1.00	1.00	0.996254	1.000000	-
Rv0269c	-	10	260.4	259.8	203.2	208.0	207.3	203.2	0.350	0.347	0.000	0.033	0.028	-0.000	269.4	259.8	213.9	249.6	230.3	203.2	0.97	1.00	0.95	0.83	0.90	1.00	0.344124	1.000000	-
Rv0270	fadD2	21	335.9	173.7	330.7	84.4	145.7	121.2	0.022	-0.909	0.000	-1.909	-1.155	-1.411	346.9	182.4	338.7	91.7	153.0	127.3	0.97	0.95	0.98	0.92	0.95	0.95	0.000000	0.000000	-
Rv0271c	fadE6	25	197.1	207.4	200.7	202.9	203.0	189.7	-0.026	0.046	0.000	0.016	0.016	-0.079	217.3	230.4	204.8	211.4	203.0	189.7	0.91	0.90	0.98	0.96	1.00	1.00	0.093641	0.714391	-
Rv0272c	-	15	76.8	88.0	85.9	78.1	76.3	87.4	-0.152	0.033	0.000	-0.128	-0.161	0.024	107.9	110.0	103.0	100.4	99.5	97.1	0.71	0.80	0.83	0.78	0.77	0.90	0.944957	1.000000	-
Rv0273c	-	15	162.4	143.2	137.5	129.2	144.2	140.8	0.232	0.057	0.000	-0.087	0.066	0.033	178.2	153.4	158.7	166.1	144.2	145.6	0.91	0.93	0.87	0.78	1.00	0.97	0.183938	1.000000	-
Rv0274	-	8	83.8	82.0	76.3	78.0	69.8	75.6	0.129	0.098	0.000	0.031	-0.121	-0.011	111.8	109.3	93.9	89.2	85.9	80.7	0.75	0.75	0.81	0.88	0.81	0.94	0.924312	1.000000	-
Rv0275c	-	7	87.8	86.7	107.8	95.5	87.6	98.3	-0.283	-0.299	0.000	-0.167	-0.286	-0.127	108.4	134.9	125.8	133.7	136.2	137.7	0.81	0.64	0.86	0.71	0.64	0.71	0.825033	1.000000	-
Rv0276	-	17	161.8	163.5	141.0	165.7	173.3	189.5	0.192	0.207	0.000	0.225	0.288	0.414	165.0	168.5	154.7	169.0	178.5	195.3	0.98	0.97	0.91	0.98	0.97	0.97	0.803670	1.000000	-
Rv0277c	-	5	128.2	110.2	117.8	118.3	116.6	121.0	0.118	-0.092	0.000	0.005	-0.014	0.037	160.3	137.8	196.3	147.8	166.6	151.3	0.80	0.80	0.60	0.80	0.70	0.80	0.992844	1.000000	-
Rv0278c	PE_PGRS3	24	301.3	287.6	292.6	279.2	241.9	243.0	0.042	-0.024	0.000	-0.066	-0.269	-0.263	374.0	336.7	326.6	340.8	283.2	271.2	0.81	0.85	0.90	0.82	0.85	0.90	0.904874	1.000000	-
Rv0279c	PE_PGRS4	17	353.4	313.0	350.1	298.4	277.7	293.2	0.013	-0.159	0.000	-0.227	-0.329	-0.252	353.4	313.0	350.1	298.4	295.0	293.2	1.00	1.00	1.00	1.00	0.94	1.00	0.496779	1.000000	-
Rv0280	PPE3	26	119.4	259.8	119.9	322.8	299.3	230.2	-0.005	1.084	0.000	1.392	1.285	0.914	194.1	270.1	159.8	327.0	305.2	234.7	0.62	0.96	0.75	0.99	0.98	0.98	0.000000	0.000000	-
Rv0281	-	12	362.2	404.6	385.7	376.2	355.9	382.4	-0.089	0.068	0.000	-0.035	-0.114	-0.012	395.2	441.4	402.4	410.4	388.2	417.2	0.92	0.92	0.96	0.92	0.92	0.92	0.995842	1.000000	-
Rv0282	-	19	1.9	0.8	0.0	0.3	0.0	4.0	0.474	0.217	0.000	0.071	0.000	0.848	18.5	10.3	0.0	14.4	0.0	21.7	0.11	0.08	0.00	0.02	0.00	0.18	0.003941	0.064444	-
Rv0283	-	22	0.3	0.2	0.0	0.0	0.4	1.4	0.096	0.064	0.000	0.000	0.113	0.358	22.6	10.0	0.0	0.0	18.0	10.3	0.02	0.02	0.00	0.00	0.02	0.14	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0284	-	57	0.6	0.0	0.0	0.1	0.0	1.5	0.167	0.000	0.000	0.024	0.000	0.389	26.2	0.0	0.0	14.4	0.0	14.7	0.02	0.00	0.00	0.01	0.00	0.11	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0285	PE5	5	0.0	0.0	0.0	0.0	0.0	2.0	0.000	0.000	0.000	0.000	0.000	0.490	0.0	0.0	0.0	0.0	0.0	10.1	0.00	0.00	0.00	0.00	0.00	0.20	0.214625	1.000000	-
Rv0286	PPE4	28	8.5	0.5	0.4	48.6	57.9	41.6	1.311	0.024	0.000	3.298	3.528	3.096	23.9	10.1	25.2	151.2	162.1	70.6	0.36	0.05	0.02	0.32	0.36	0.59	0.000000	0.000000	-
Rv0287	esxG	3	1.8	0.0	0.0	0.0	0.0	1.6	0.448	0.000	0.000	0.000	0.000	0.393	16.4	0.0	0.0	0.0	0.0	9.4	0.11	0.00	0.00	0.00	0.00	0.17	0.837583	1.000000	-
Rv0288	esxH	7	1.1	0.0	0.0	0.0	0.0	2.7	0.281	0.000	0.000	0.000	0.000	0.620	22.6	0.0	0.0	0.0	0.0	12.5	0.05	0.00	0.00	0.00	0.00	0.21	0.130331	0.866704	-
Rv0289	-	13	3.6	4.7	0.0	0.0	0.0	7.6	0.779	0.962	0.000	0.000	0.000	1.329	34.9	24.7	0.0	0.0	0.0	17.9	0.10	0.19	0.00	0.00	0.00	0.42	0.000003	0.000112	-
Rv0290	-	18	1.6	0.3	0.0	0.0	0.0	6.2	0.408	0.078	0.000	0.000	0.000	1.164	22.1	10.0	0.0	0.0	0.0	22.3	0.07	0.03	0.00	0.00	0.00	0.28	0.000026	0.000755	-
Rv0291	mycP3	12	32.1	3.5	1.3	0.0	0.4	26.1	2.559	0.427	0.000	-0.331	-0.227	2.308	67.9	27.7	31.0	0.0	9.0	44.8	0.47	0.12	0.04	0.00	0.04	0.58	0.000000	0.000000	-
Rv0292	-	16	19.7	5.4	3.9	2.6	4.6	15.7	1.471	0.228	0.000	-0.224	0.104	1.214	63.0	28.9	62.5	42.0	73.2	25.1	0.31	0.19	0.06	0.06	0.06	0.62	0.000000	0.000000	-
Rv0293c	-	26	198.6	230.3	186.8	230.4	185.6	219.4	0.087	0.295	0.000	0.296	-0.009	0.227	231.3	249.5	220.7	239.6	185.6	253.5	0.86	0.92	0.85	0.96	1.00	0.87	0.036541	0.379683	-
Rv0294	tam	13	177.7	228.8	197.3	213.0	230.4	198.9	-0.147	0.209	0.000	0.108	0.219	0.011	192.5	258.6	205.2	213.0	239.7	198.9	0.92	0.88	0.96	1.00	0.96	1.00	0.466917	1.000000	-
Rv0295c	-	7	219.1	198.6	179.8	195.5	200.3	257.0	0.278	0.139	0.000	0.117	0.151	0.503	255.6	198.6	193.7	195.5	233.6	299.8	0.86	1.00	0.93	1.00	0.86	0.86	0.259489	1.000000	-
Rv0296c	-	42	153.0	145.1	142.3	157.2	151.8	153.0	0.101	0.028	0.000	0.140	0.091	0.102	183.5	171.7	175.7	181.7	174.7	181.0	0.83	0.85	0.81	0.87	0.87	0.85	0.998766	1.000000	-
Rv0297	PE_PGRS5	14	253.5	227.5	248.7	232.0	213.4	216.6	0.027	-0.126	0.000	-0.098	-0.216	-0.195	287.8	289.5	290.1	263.3	284.5	288.8	0.88	0.79	0.86	0.88	0.75	0.75	0.735410	1.000000	-
Rv0298	-	5	327.1	312.7	288.6	341.9	326.5	272.4	0.178	0.114	0.000	0.241	0.175	-0.082	327.1	312.7	288.6	341.9	326.5	302.7	1.00	1.00	1.00	1.00	1.00	0.90	0.926552	1.000000	-
Rv0299	-	2	616.6	700.6	595.2	494.9	438.6	343.3	0.050	0.233	0.000	-0.264	-0.436	-0.785	616.6	700.6	595.2	494.9	438.6	343.3	1.00	1.00	1.00	1.00	1.00	1.00	0.752177	1.000000	-
Rv0300	-	4	340.0	394.2	368.3	345.5	328.3	326.1	-0.114	0.097	0.000	-0.091	-0.164	-0.173	340.0	394.2	368.3	345.5	328.3	326.1	1.00	1.00	1.00	1.00	1.00	1.00	0.998844	1.000000	-
Rv0301	-	7	403.4	401.0	369.1	352.8	349.8	365.7	0.127	0.118	0.000	-0.064	-0.076	-0.013	403.4	401.0	369.1	352.8	349.8	365.7	1.00	1.00	1.00	1.00	1.00	1.00	0.991127	1.000000	-
Rv0302	-	8	250.9	261.1	274.4	223.9	242.5	243.2	-0.127	-0.070	0.000	-0.288	-0.175	-0.171	261.8	261.1	274.4	223.9	242.5	243.2	0.96	1.00	1.00	1.00	1.00	1.00	0.954406	1.000000	-
Rv0303	-	12	252.1	257.5	209.9	233.6	268.5	267.4	0.259	0.289	0.000	0.151	0.348	0.342	252.1	257.5	209.9	233.6	268.5	267.4	1.00	1.00	1.00	1.00	1.00	1.00	0.707506	1.000000	-
Rv0304c	PPE5	118	79.0	85.2	73.2	79.2	85.1	90.4	0.103	0.205	0.000	0.106	0.203	0.286	116.0	109.3	106.0	115.8	116.7	112.9	0.68	0.78	0.69	0.68	0.73	0.80	0.222131	1.000000	-
Rv0305c	PPE6	53	47.9	57.0	55.3	63.4	61.7	64.7	-0.190	0.039	0.000	0.182	0.146	0.209	67.4	73.7	81.5	83.4	78.9	80.7	0.71	0.77	0.68	0.76	0.78	0.80	0.546277	1.000000	-
Rv0306	-	6	373.4	311.0	364.5	370.4	313.3	330.4	0.034	-0.226	0.000	0.023	-0.215	-0.140	373.4	311.0	364.5	370.4	313.3	330.4	1.00	1.00	1.00	1.00	1.00	1.00	0.985591	1.000000	-
Rv0307c	-	8	153.9	154.4	149.0	131.3	142.8	179.3	0.045	0.049	0.000	-0.177	-0.059	0.259	153.9	154.4	149.0	131.3	142.8	179.3	1.00	1.00	1.00	1.00	1.00	1.00	0.874734	1.000000	-
Rv0308	-	15	142.7	174.6	164.8	155.3	164.8	175.8	-0.201	0.081	0.000	-0.083	-0.000	0.091	178.4	174.6	170.5	166.4	176.6	175.8	0.80	1.00	0.97	0.93	0.93	1.00	0.092516	0.708520	-
Rv0309	-	11	109.4	129.9	133.3	115.9	128.8	129.6	-0.273	-0.036	0.000	-0.193	-0.047	-0.038	128.9	129.9	139.6	131.9	134.9	135.8	0.85	1.00	0.95	0.88	0.95	0.95	0.733548	1.000000	-
Rv0310c	-	12	76.8	67.9	86.7	73.4	85.3	82.4	-0.165	-0.331	0.000	-0.225	-0.022	-0.068	98.7	77.6	104.0	88.1	93.0	89.9	0.78	0.88	0.83	0.83	0.92	0.92	0.975085	1.000000	-
Rv0311	-	15	102.7	115.0	86.1	96.9	98.9	105.4	0.242	0.398	0.000	0.162	0.191	0.278	105.0	119.0	89.0	106.3	102.3	109.0	0.98	0.97	0.97	0.91	0.97	0.97	0.842538	1.000000	-
Rv0312	-	19	32.7	38.0	46.7	52.1	32.2	38.0	-0.457	-0.267	0.000	0.142	-0.478	-0.267	56.5	68.8	71.0	90.0	55.5	68.7	0.58	0.55	0.66	0.58	0.58	0.55	0.459056	1.000000	-
Rv0313	-	4	605.7	623.4	547.8	603.8	602.8	603.5	0.144	0.185	0.000	0.139	0.137	0.139	605.7	623.4	547.8	603.8	602.8	603.5	1.00	1.00	1.00	1.00	1.00	1.00	0.999655	1.000000	-
Rv0314c	-	7	397.4	341.3	297.5	326.7	265.4	329.3	0.411	0.195	0.000	0.133	-0.162	0.144	397.4	341.3	378.7	326.7	285.8	329.3	1.00	1.00	0.79	1.00	0.93	1.00	0.288463	1.000000	-
Rv0315	-	8	118.4	117.2	102.0	143.5	133.3	117.0	0.205	0.192	0.000	0.472	0.370	0.189	135.3	134.0	116.6	164.0	152.3	133.7	0.88	0.88	0.88	0.88	0.88	0.88	0.926446	1.000000	-
Rv0316	-	8	380.5	293.9	309.6	264.6	288.1	252.8	0.293	-0.074	0.000	-0.223	-0.102	-0.288	456.6	361.7	381.0	302.4	288.1	311.1	0.83	0.81	0.81	0.88	1.00	0.81	0.684324	1.000000	-
Rv0317c	glpQ2	13	388.5	335.5	371.0	352.8	337.3	328.8	0.066	-0.143	0.000	-0.071	-0.135	-0.172	388.5	363.5	371.0	352.8	350.8	328.8	1.00	0.92	1.00	1.00	0.96	1.00	0.602947	1.000000	-
Rv0318c	-	6	353.6	357.5	325.5	343.8	336.3	340.7	0.118	0.133	0.000	0.078	0.046	0.065	353.6	357.5	325.5	343.8	336.3	340.7	1.00	1.00	1.00	1.00	1.00	1.00	0.999483	1.000000	-
Rv0319	pcp	6	245.1	244.5	206.2	258.3	215.0	256.9	0.244	0.240	0.000	0.318	0.059	0.311	259.5	244.5	206.2	258.3	234.5	256.9	0.94	1.00	1.00	1.00	0.92	1.00	0.904497	1.000000	-
Rv0320	-	12	208.1	207.7	187.7	188.3	202.2	208.9	0.146	0.143	0.000	0.005	0.105	0.151	208.1	207.7	187.7	205.5	220.6	208.9	1.00	1.00	1.00	0.92	0.92	1.00	0.274098	1.000000	-
Rv0321	dcd	4	124.6	138.7	129.6	109.0	86.2	132.5	-0.055	0.095	0.000	-0.239	-0.562	0.031	166.1	185.0	148.1	145.3	98.5	151.5	0.75	0.75	0.88	0.75	0.88	0.88	0.902984	1.000000	-
Rv0322	udgA	21	116.0	121.1	112.3	114.2	123.4	126.1	0.044	0.103	0.000	0.023	0.130	0.160	132.8	124.0	124.2	119.9	129.6	129.2	0.87	0.98	0.90	0.95	0.95	0.98	0.780209	1.000000	-
Rv0323c	-	11	257.8	245.2	243.0	210.6	239.3	201.0	0.083	0.012	0.000	-0.202	-0.022	-0.268	293.4	299.6	281.4	231.6	309.7	245.6	0.88	0.82	0.86	0.91	0.77	0.82	0.838433	1.000000	-
Rv0324	-	11	250.8	228.5	265.8	266.5	267.7	216.1	-0.082	-0.214	0.000	0.004	0.010	-0.292	275.9	228.5	307.7	266.5	294.4	237.7	0.91	1.00	0.86	1.00	0.91	0.91	0.373449	1.000000	-
Rv0325	-	5	242.4	192.7	220.0	185.6	212.1	211.3	0.137	-0.186	0.000	-0.239	-0.052	-0.056	279.7	192.7	220.0	198.8	212.1	211.3	0.87	1.00	1.00	0.93	1.00	1.00	0.881827	1.000000	-
Rv0326	-	9	151.1	150.1	168.8	164.5	175.4	156.6	-0.154	-0.164	0.000	-0.036	0.054	-0.105	163.2	192.9	202.5	164.5	197.4	156.6	0.93	0.78	0.83	1.00	0.89	1.00	0.199559	1.000000	-
Rv0327c	cyp135A1	21	55.3	58.5	57.2	57.8	64.4	65.3	-0.044	0.029	0.000	0.014	0.158	0.177	69.7	66.4	82.9	74.4	69.4	70.4	0.79	0.88	0.69	0.78	0.93	0.93	0.278723	1.000000	-
Rv0328	-	11	251.4	223.2	216.8	177.5	174.5	188.6	0.209	0.041	0.000	-0.282	-0.305	-0.196	267.6	245.5	280.6	195.2	213.3	207.5	0.94	0.91	0.77	0.91	0.82	0.91	0.687204	1.000000	-
Rv0329c	-	8	174.8	207.8	182.1	169.8	154.3	175.6	-0.057	0.186	0.000	-0.098	-0.232	-0.051	209.7	277.1	242.8	254.7	190.0	187.3	0.83	0.75	0.75	0.67	0.81	0.94	0.753902	1.000000	-
Rv0330c	-	9	307.8	307.4	295.5	302.1	295.6	317.0	0.058	0.056	0.000	0.031	0.000	0.099	307.8	307.4	332.5	302.1	295.6	317.0	1.00	1.00	0.89	1.00	1.00	1.00	0.703673	1.000000	-
Rv0331	-	18	147.2	139.2	127.5	138.5	132.6	130.4	0.200	0.122	0.000	0.116	0.054	0.032	169.1	156.6	143.4	143.9	144.6	130.4	0.87	0.89	0.89	0.96	0.92	1.00	0.479570	1.000000	-
Rv0332	-	8	283.8	270.1	281.4	243.6	285.9	244.3	0.012	-0.058	0.000	-0.204	0.022	-0.201	283.8	270.1	281.4	243.6	285.9	244.3	1.00	1.00	1.00	1.00	1.00	1.00	0.977881	1.000000	-
Rv0333	-	4	194.3	189.5	184.7	222.5	184.1	183.0	0.072	0.036	0.000	0.263	-0.004	-0.013	233.2	189.5	246.2	267.1	245.5	209.2	0.83	1.00	0.75	0.83	0.75	0.88	0.956892	1.000000	-
Rv0334	rmlA	15	0.0	0.0	1.0	0.0	0.3	0.0	-0.271	-0.271	0.000	-0.271	-0.187	-0.271	0.0	0.0	31.0	0.0	9.0	0.0	0.00	0.00	0.03	0.00	0.03	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0335c	PE6	1	63.9	35.6	18.9	0.0	0.0	0.0	1.524	0.761	0.000	-2.260	-2.260	-2.260	63.9	35.6	37.9	0.0	0.0	0.0	1.00	1.00	0.50	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0336	-	18	321.7	310.7	322.0	329.0	310.8	297.6	-0.001	-0.051	0.000	0.030	-0.050	-0.112	327.8	310.7	322.0	329.0	310.8	297.6	0.98	1.00	1.00	1.00	1.00	1.00	0.985324	1.000000	-
Rv0337c	aspC	20	94.9	109.8	83.6	112.3	111.0	103.1	0.173	0.374	0.000	0.405	0.389	0.287	116.2	129.2	98.3	124.8	126.8	114.5	0.82	0.85	0.85	0.90	0.88	0.90	0.902000	1.000000	-
Rv0338c	-	35	31.8	7.0	34.4	1.2	0.8	12.7	-0.098	-1.718	0.000	-2.664	-2.764	-1.152	72.6	61.0	77.7	21.3	11.2	68.5	0.44	0.11	0.44	0.06	0.07	0.19	0.000000	0.000000	-
Rv0339c	-	26	144.9	179.1	168.1	167.0	182.1	161.6	-0.207	0.089	0.000	-0.009	0.112	-0.055	182.3	216.5	194.2	197.4	210.4	182.7	0.79	0.83	0.87	0.85	0.87	0.88	0.902298	1.000000	-
Rv0340	-	4	48.1	52.2	51.5	68.4	91.4	55.7	-0.088	0.019	0.000	0.379	0.771	0.104	72.2	52.2	82.4	74.6	91.4	89.1	0.67	1.00	0.62	0.92	1.00	0.62	0.265206	1.000000	-
Rv0341	iniB	15	126.8	137.8	161.3	128.5	110.1	116.1	-0.336	-0.220	0.000	-0.317	-0.531	-0.458	167.8	165.4	172.9	165.2	127.1	145.1	0.76	0.83	0.93	0.78	0.87	0.80	0.693478	1.000000	-
Rv0342	iniA	24	149.5	190.0	156.8	174.3	172.9	180.2	-0.067	0.270	0.000	0.148	0.137	0.195	156.0	190.0	163.6	181.9	188.6	196.6	0.96	1.00	0.96	0.96	0.92	0.92	0.207501	1.000000	-
Rv0343	iniC	10	175.9	133.1	159.9	129.4	180.5	141.6	0.134	-0.255	0.000	-0.295	0.170	-0.170	229.4	147.9	188.1	168.8	200.5	141.6	0.77	0.90	0.85	0.77	0.90	1.00	0.272919	1.000000	-
Rv0344c	lpqJ	10	216.2	204.1	150.1	165.6	174.1	208.8	0.513	0.432	0.000	0.138	0.208	0.463	223.7	204.1	166.8	165.6	183.3	208.8	0.97	1.00	0.90	1.00	0.95	1.00	0.387968	1.000000	-
Rv0345	-	7	317.5	239.6	252.7	249.4	239.6	268.4	0.323	-0.075	0.000	-0.018	-0.075	0.085	317.5	239.6	252.7	249.4	239.6	268.4	1.00	1.00	1.00	1.00	1.00	1.00	0.877769	1.000000	-
Rv0346c	ansP2	26	198.1	129.7	180.5	91.3	111.1	115.1	0.131	-0.462	0.000	-0.946	-0.676	-0.628	220.8	146.6	208.6	104.7	120.4	127.3	0.90	0.88	0.87	0.87	0.92	0.90	0.000196	0.004689	-
Rv0347	-	15	0.6	5.8	8.5	0.6	5.1	4.1	-1.267	-0.323	0.000	-1.260	-0.428	-0.572	14.0	58.2	51.2	14.6	30.3	30.8	0.04	0.10	0.17	0.04	0.17	0.13	0.115675	0.799142	-
Rv0348	-	16	24.8	39.1	20.1	29.4	29.3	26.7	0.243	0.812	0.000	0.451	0.447	0.336	54.0	54.4	58.6	58.7	42.6	38.9	0.46	0.72	0.34	0.50	0.69	0.69	0.111618	0.785054	-
Rv0349	-	8	180.1	155.1	135.2	127.5	142.5	187.5	0.401	0.192	0.000	-0.081	0.074	0.458	180.1	155.1	135.2	127.5	142.5	187.5	1.00	1.00	1.00	1.00	1.00	1.00	0.377849	1.000000	-
Rv0350	dnaK	17	1.0	0.9	0.4	0.3	0.4	0.6	0.158	0.133	0.000	-0.022	0.015	0.059	16.9	15.1	12.6	14.8	14.5	10.1	0.06	0.06	0.03	0.02	0.03	0.06	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0351	grpE	9	6.2	15.2	10.4	7.5	9.3	8.8	-0.466	0.388	0.000	-0.304	-0.109	-0.163	55.7	91.3	94.0	67.7	56.0	79.2	0.11	0.17	0.11	0.11	0.17	0.11	0.996922	1.000000	-
Rv0352	dnaJ1	11	26.4	70.3	33.3	66.0	64.1	39.6	-0.285	0.976	0.000	0.891	0.853	0.221	45.9	81.4	48.8	80.6	74.2	51.2	0.58	0.86	0.68	0.82	0.86	0.77	0.024860	0.279413	-
Rv0353	hspR	6	523.1	411.7	514.7	687.5	589.0	390.4	0.023	-0.319	0.000	0.414	0.193	-0.394	553.8	411.7	617.7	825.1	589.0	468.5	0.94	1.00	0.83	0.83	1.00	0.83	0.209290	1.000000	-
Rv0354c	PPE7	4	46.1	48.4	46.3	32.8	55.7	59.4	-0.005	0.058	0.000	-0.441	0.243	0.328	50.3	48.4	53.0	32.8	55.7	59.4	0.92	1.00	0.88	1.00	1.00	1.00	0.517931	1.000000	-
Rv0355c	PPE8	154	67.2	77.0	64.6	73.1	72.4	75.7	0.052	0.236	0.000	0.167	0.153	0.214	121.2	122.2	117.7	123.8	110.9	115.4	0.55	0.63	0.55	0.59	0.65	0.66	0.855997	1.000000	-
Rv0356c	-	8	142.4	219.2	191.6	168.1	168.9	196.1	-0.415	0.189	0.000	-0.183	-0.177	0.033	148.6	219.2	204.4	168.1	168.9	196.1	0.96	1.00	0.94	1.00	1.00	1.00	0.739600	1.000000	-
Rv0357c	purA	23	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0358	-	10	42.8	60.9	46.5	15.5	19.9	31.9	-0.108	0.355	0.000	-1.327	-1.047	-0.479	58.3	60.9	54.7	27.4	23.5	37.6	0.73	1.00	0.85	0.57	0.85	0.85	0.000002	0.000062	-
Rv0359	-	10	361.0	363.6	426.9	352.3	387.1	389.2	-0.239	-0.229	0.000	-0.274	-0.139	-0.132	373.4	363.6	449.4	352.3	387.1	389.2	0.97	1.00	0.95	1.00	1.00	1.00	0.868080	1.000000	-
Rv0360c	-	8	563.4	458.7	485.0	459.5	463.0	404.7	0.214	-0.080	0.000	-0.077	-0.066	-0.258	587.9	524.2	485.0	525.1	529.1	404.7	0.96	0.88	1.00	0.88	0.88	1.00	0.536493	1.000000	-
Rv0361	-	8	150.0	197.0	141.4	199.6	211.2	191.9	0.082	0.465	0.000	0.483	0.562	0.428	163.6	197.0	161.6	199.6	211.2	191.9	0.92	1.00	0.88	1.00	1.00	1.00	0.474483	1.000000	-
Rv0362	mgtE	14	490.8	383.1	416.5	396.7	356.2	351.4	0.234	-0.119	0.000	-0.069	-0.223	-0.242	528.6	412.5	448.6	427.2	356.2	378.4	0.93	0.93	0.93	0.93	1.00	0.93	0.859501	1.000000	-
Rv0363c	fba	14	16.9	17.4	18.6	16.4	29.2	10.5	-0.108	-0.078	0.000	-0.142	0.532	-0.609	35.6	25.7	43.5	31.4	37.2	17.3	0.48	0.68	0.43	0.52	0.79	0.61	0.005595	0.087165	-
Rv0364	-	12	1.1	2.6	1.8	2.4	2.1	2.4	-0.160	0.155	0.000	0.109	0.060	0.121	13.2	31.0	21.8	28.2	16.8	29.0	0.08	0.08	0.08	0.08	0.12	0.08	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0365c	-	19	396.5	388.0	340.4	390.7	374.1	364.7	0.217	0.186	0.000	0.196	0.134	0.098	461.2	398.5	369.6	404.9	374.1	374.5	0.86	0.97	0.92	0.96	1.00	0.97	0.353277	1.000000	-
Rv0366c	-	5	243.4	285.5	317.3	247.3	237.3	248.1	-0.375	-0.149	0.000	-0.353	-0.411	-0.348	243.4	285.5	317.3	247.3	237.3	248.1	1.00	1.00	1.00	1.00	1.00	1.00	0.842688	1.000000	-
Rv0367c	-	2	103.1	119.5	112.1	109.5	105.1	47.2	-0.115	0.089	0.000	-0.032	-0.089	-1.165	103.1	119.5	112.1	109.5	105.1	47.2	1.00	1.00	1.00	1.00	1.00	1.00	0.150251	0.944164	-
Rv0368c	-	17	312.4	334.2	334.9	293.1	289.0	310.6	-0.099	-0.003	0.000	-0.189	-0.209	-0.107	312.4	334.2	345.1	293.1	297.8	310.6	1.00	1.00	0.97	1.00	0.97	1.00	0.787979	1.000000	-
Rv0369c	-	7	107.9	68.1	87.2	95.4	95.8	74.9	0.292	-0.335	0.000	0.123	0.129	-0.206	125.8	79.4	101.7	111.3	95.8	87.4	0.86	0.86	0.86	0.86	1.00	0.86	0.690851	1.000000	-
Rv0370c	-	19	85.0	62.1	67.1	53.4	51.2	48.3	0.319	-0.103	0.000	-0.303	-0.360	-0.436	112.6	76.1	94.4	70.8	60.8	68.0	0.75	0.82	0.71	0.75	0.84	0.71	0.247463	1.000000	-
Rv0371c	-	5	80.3	78.4	65.0	43.8	70.9	51.5	0.284	0.252	0.000	-0.521	0.116	-0.311	120.4	98.0	108.4	109.5	88.6	73.5	0.67	0.80	0.60	0.40	0.80	0.70	0.663302	1.000000	-
Rv0372c	-	6	103.3	65.6	109.4	122.7	97.3	90.9	-0.080	-0.697	0.000	0.159	-0.162	-0.256	143.0	78.7	119.4	130.0	145.9	109.0	0.72	0.83	0.92	0.94	0.67	0.83	0.525198	1.000000	-
Rv0373c	-	37	94.2	93.1	102.4	99.6	91.1	103.0	-0.115	-0.130	0.000	-0.039	-0.160	0.008	108.9	113.0	118.4	114.0	99.2	121.0	0.86	0.82	0.86	0.87	0.92	0.85	0.750521	1.000000	-
Rv0374c	-	4	59.9	84.1	100.1	95.2	118.0	66.3	-0.695	-0.239	0.000	-0.068	0.227	-0.560	65.3	84.1	100.1	95.2	118.0	66.3	0.92	1.00	1.00	1.00	1.00	1.00	0.729683	1.000000	-
Rv0375c	-	8	104.8	73.3	134.5	113.5	104.9	105.3	-0.346	-0.834	0.000	-0.236	-0.344	-0.340	139.7	106.6	195.7	151.4	111.9	129.6	0.75	0.69	0.69	0.75	0.94	0.81	0.816959	1.000000	-
Rv0376c	-	18	90.4	75.6	114.8	72.3	88.3	96.0	-0.329	-0.571	0.000	-0.633	-0.361	-0.246	101.7	82.5	137.8	88.7	96.3	104.7	0.89	0.92	0.83	0.81	0.92	0.92	0.479621	1.000000	-
Rv0377	-	8	128.5	136.7	115.7	181.6	121.7	94.4	0.145	0.231	0.000	0.628	0.070	-0.281	171.3	156.2	154.3	242.1	149.8	100.7	0.75	0.88	0.75	0.75	0.81	0.94	0.047000	0.455165	-
Rv0378	-	3	118.3	150.5	100.0	133.1	91.8	135.9	0.233	0.567	0.000	0.395	-0.118	0.424	177.5	225.7	150.0	171.1	110.1	203.8	0.67	0.67	0.67	0.78	0.83	0.67	0.994315	1.000000	-
Rv0379	secE2	2	239.8	229.4	161.4	196.4	147.1	276.5	0.557	0.494	0.000	0.275	-0.130	0.758	239.8	229.4	161.4	196.4	147.1	276.5	1.00	1.00	1.00	1.00	1.00	1.00	0.657296	1.000000	-
Rv0380c	-	10	220.6	232.4	257.9	213.2	200.2	205.7	-0.221	-0.147	0.000	-0.269	-0.358	-0.319	220.6	232.4	257.9	213.2	200.2	228.5	1.00	1.00	1.00	1.00	1.00	0.90	0.459956	1.000000	-
Rv0381c	-	17	200.7	238.2	185.6	316.2	304.8	217.9	0.110	0.352	0.000	0.753	0.701	0.226	238.0	238.2	210.4	336.0	323.9	217.9	0.84	1.00	0.88	0.94	0.94	1.00	0.002704	0.047523	-
Rv0382c	pyrE	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0383c	-	8	32.2	8.9	14.0	12.0	6.2	8.3	0.965	-0.452	0.000	-0.167	-0.765	-0.521	257.4	71.4	112.4	95.7	49.7	66.2	0.12	0.12	0.12	0.12	0.12	0.12	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0384c	clpB	21	18.6	70.3	27.0	48.2	67.4	45.2	-0.437	1.237	0.000	0.735	1.180	0.651	39.1	77.7	47.2	55.2	74.5	51.3	0.48	0.90	0.57	0.87	0.90	0.88	0.000000	0.000000	-
Rv0385	-	19	435.6	419.8	412.3	413.2	364.6	341.6	0.078	0.026	0.000	0.003	-0.175	-0.268	435.6	419.8	423.5	413.2	374.4	341.6	1.00	1.00	0.97	1.00	0.97	1.00	0.843075	1.000000	-
Rv0386	-	41	258.0	218.6	231.3	251.6	231.1	217.5	0.155	-0.080	0.000	0.119	-0.001	-0.087	278.4	242.2	249.6	266.7	243.0	225.8	0.93	0.90	0.93	0.94	0.95	0.96	0.950311	1.000000	-
Rv0387c	-	11	153.8	166.2	154.1	150.3	181.3	122.0	-0.002	0.106	0.000	-0.034	0.228	-0.325	163.7	192.4	178.4	155.0	181.3	141.3	0.94	0.86	0.86	0.97	1.00	0.86	0.488226	1.000000	-
Rv0388c	PPE9	9	44.2	30.0	38.6	43.1	45.2	47.1	0.173	-0.317	0.000	0.140	0.203	0.256	59.6	41.6	57.9	58.1	62.6	56.5	0.74	0.72	0.67	0.74	0.72	0.83	0.981329	1.000000	-
Rv0389	purT	7	372.5	387.9	429.2	360.6	324.6	413.2	-0.202	-0.144	0.000	-0.248	-0.398	-0.054	411.7	452.5	462.2	420.7	378.7	413.2	0.90	0.86	0.93	0.86	0.86	1.00	0.873275	1.000000	-
Rv0390	-	6	267.7	271.1	227.2	225.2	208.1	226.9	0.232	0.250	0.000	-0.012	-0.124	-0.002	301.2	325.3	272.7	270.3	249.8	272.3	0.89	0.83	0.83	0.83	0.83	0.83	0.996784	1.000000	-
Rv0391	metZ	20	90.6	94.5	82.0	92.5	88.0	98.1	0.136	0.194	0.000	0.165	0.096	0.245	113.2	114.5	99.4	106.8	103.5	103.2	0.80	0.82	0.82	0.87	0.85	0.95	0.886019	1.000000	-
Rv0392c	ndhA	15	168.5	203.3	170.5	195.4	174.5	172.8	-0.016	0.247	0.000	0.191	0.033	0.019	194.4	217.8	182.7	204.5	201.4	185.1	0.87	0.93	0.93	0.96	0.87	0.93	0.911971	1.000000	-
Rv0393	-	10	330.6	308.1	342.6	352.9	375.2	314.3	-0.050	-0.151	0.000	0.042	0.130	-0.122	342.0	362.4	403.0	441.2	441.5	349.2	0.97	0.85	0.85	0.80	0.85	0.90	0.556551	1.000000	-
Rv0394c	-	9	140.2	167.8	168.8	160.2	158.5	166.5	-0.259	-0.008	0.000	-0.073	-0.088	-0.019	157.7	177.7	189.9	173.0	167.8	166.5	0.89	0.94	0.89	0.93	0.94	1.00	0.958482	1.000000	-
Rv0395	-	6	96.4	98.0	80.8	92.3	72.7	76.4	0.241	0.264	0.000	0.182	-0.143	-0.075	96.4	106.9	88.1	92.3	72.7	76.4	1.00	0.92	0.92	1.00	1.00	1.00	0.769066	1.000000	-
Rv0396	-	4	34.6	26.7	14.9	16.3	41.5	29.0	0.990	0.672	0.000	0.098	1.223	0.773	51.9	42.8	59.7	65.3	55.4	38.7	0.67	0.62	0.25	0.25	0.75	0.75	0.330945	1.000000	-
Rv0397	-	3	214.5	231.5	221.7	215.3	272.5	208.7	-0.047	0.061	0.000	-0.041	0.292	-0.085	275.8	231.5	332.6	323.0	272.5	208.7	0.78	1.00	0.67	0.67	1.00	1.00	0.566449	1.000000	-
Rv0398c	-	4	145.9	137.7	178.8	141.6	188.8	136.8	-0.284	-0.364	0.000	-0.326	0.077	-0.374	194.6	157.4	204.3	141.6	251.8	136.8	0.75	0.88	0.88	1.00	0.75	1.00	0.104593	0.756025	-
Rv0399c	lpqK	22	58.4	71.1	62.7	61.0	72.9	62.3	-0.096	0.168	0.000	-0.038	0.201	-0.009	74.1	84.5	81.2	69.4	80.2	76.2	0.79	0.84	0.77	0.88	0.91	0.82	0.805899	1.000000	-
Rv0400c	fadE7	10	93.1	66.2	99.5	84.2	51.5	73.5	-0.091	-0.555	0.000	-0.229	-0.887	-0.414	103.5	66.2	110.6	97.1	68.7	73.5	0.90	1.00	0.90	0.87	0.75	1.00	0.025806	0.285905	-
Rv0401	-	3	75.5	97.1	112.8	83.2	93.4	64.1	-0.550	-0.207	0.000	-0.417	-0.259	-0.771	75.5	97.1	112.8	93.6	93.4	64.1	1.00	1.00	1.00	0.89	1.00	1.00	0.592590	1.000000	-
Rv0402c	mmpL1	48	107.7	87.7	93.9	100.5	87.3	105.6	0.189	-0.093	0.000	0.094	-0.099	0.162	122.1	97.9	107.3	110.5	95.2	110.2	0.88	0.90	0.88	0.91	0.92	0.96	0.681289	1.000000	-
Rv0403c	mmpS1	7	68.4	86.0	87.1	87.6	102.5	126.3	-0.328	-0.017	0.000	0.008	0.223	0.512	71.8	86.0	87.1	87.6	102.5	126.3	0.95	1.00	1.00	1.00	1.00	1.00	0.312853	1.000000	-
Rv0404	fadD30	80	17.1	19.7	20.5	17.1	18.4	22.6	-0.206	-0.044	0.000	-0.202	-0.123	0.117	43.1	38.0	41.4	35.1	33.0	37.3	0.40	0.52	0.49	0.49	0.56	0.61	0.144945	0.930416	-
Rv0405	pks6	103	47.1	57.2	50.5	49.4	51.0	51.4	-0.089	0.166	0.000	-0.028	0.014	0.024	103.3	103.4	102.9	98.4	92.2	93.6	0.46	0.55	0.49	0.50	0.55	0.55	0.991087	1.000000	-
Rv0406c	-	13	199.5	234.7	197.3	240.0	197.1	211.5	0.016	0.245	0.000	0.277	-0.001	0.098	204.8	234.7	213.7	240.0	197.1	229.2	0.97	1.00	0.92	1.00	1.00	0.92	0.551350	1.000000	-
Rv0407	fgd1	18	151.4	154.4	167.7	144.7	147.2	175.5	-0.143	-0.115	0.000	-0.206	-0.182	0.063	157.2	154.4	188.7	144.7	147.2	175.5	0.96	1.00	0.89	1.00	1.00	1.00	0.074482	0.623469	-
Rv0408	pta	38	142.4	120.3	145.2	131.0	123.9	121.9	-0.027	-0.261	0.000	-0.143	-0.221	-0.243	156.1	142.9	157.6	153.9	147.1	136.2	0.91	0.84	0.92	0.85	0.84	0.89	0.553303	1.000000	-
Rv0409	ackA	16	46.3	39.1	42.7	41.7	41.8	53.3	0.104	-0.115	0.000	-0.031	-0.029	0.290	61.7	54.4	68.4	52.7	55.7	63.2	0.75	0.72	0.62	0.79	0.75	0.84	0.846315	1.000000	-
Rv0410c	pknG	29	34.4	81.8	32.5	54.9	75.7	49.8	0.073	1.211	0.000	0.675	1.107	0.547	49.9	91.2	55.4	68.2	84.5	55.5	0.69	0.90	0.59	0.80	0.90	0.90	0.000000	0.000011	-
Rv0411c	glnH	8	28.3	51.0	45.2	37.9	52.8	43.7	-0.595	0.158	0.000	-0.229	0.203	-0.044	42.4	51.0	55.7	45.4	56.3	46.6	0.67	1.00	0.81	0.83	0.94	0.94	0.203287	1.000000	-
Rv0412c	-	21	45.7	109.8	35.4	71.0	90.6	72.0	0.327	1.506	0.000	0.910	1.242	0.929	61.3	115.3	57.2	82.8	92.8	75.6	0.75	0.95	0.62	0.86	0.98	0.95	0.000000	0.000005	-
Rv0413	mutT3	5	231.8	284.0	214.6	319.5	279.1	277.1	0.109	0.396	0.000	0.563	0.371	0.361	267.5	284.0	214.6	319.5	279.1	277.1	0.87	1.00	1.00	1.00	1.00	1.00	0.737455	1.000000	-
Rv0414c	thiE	9	0.9	2.9	0.7	0.0	0.8	1.2	0.041	0.466	0.000	-0.189	0.026	0.123	23.3	17.2	12.6	0.0	14.5	21.7	0.04	0.17	0.06	0.00	0.06	0.06	0.728193	1.000000	-
Rv0415	thiO	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0416	thiS	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0417	thiG	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0418	lpqL	26	94.2	111.4	118.8	105.5	110.9	102.6	-0.320	-0.089	0.000	-0.164	-0.095	-0.203	106.5	118.2	126.1	121.0	115.4	111.1	0.88	0.94	0.94	0.87	0.96	0.92	0.666124	1.000000	-
Rv0419	lpqM	18	93.0	80.4	78.6	75.6	65.4	82.7	0.228	0.030	0.000	-0.053	-0.249	0.069	102.4	87.7	85.8	78.5	67.2	90.2	0.91	0.92	0.92	0.96	0.97	0.92	0.567177	1.000000	-
Rv0420c	-	7	316.7	326.4	306.1	339.0	295.8	308.9	0.048	0.091	0.000	0.145	-0.048	0.013	316.7	326.4	306.1	339.0	295.8	308.9	1.00	1.00	1.00	1.00	1.00	1.00	0.991789	1.000000	-
Rv0421c	-	8	45.8	27.5	31.6	22.9	17.9	36.1	0.472	-0.171	0.000	-0.393	-0.675	0.168	54.9	44.0	38.9	39.2	26.1	41.3	0.83	0.62	0.81	0.58	0.69	0.88	0.088261	0.694601	-
Rv0422c	thiD	14	0.7	1.8	0.9	0.0	0.8	0.4	-0.058	0.201	0.000	-0.239	-0.015	-0.132	14.0	12.5	12.6	0.0	11.8	10.8	0.05	0.14	0.07	0.00	0.07	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0423c	thiC	19	5.4	1.1	5.9	0.0	0.4	0.8	-0.064	-0.846	0.000	-1.126	-1.020	-0.908	103.4	20.4	112.4	0.0	14.5	15.6	0.05	0.05	0.05	0.00	0.03	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0424c	-	8	65.6	61.2	64.2	51.1	66.6	84.5	0.030	-0.063	0.000	-0.301	0.050	0.372	78.7	65.3	85.5	53.3	76.1	84.5	0.83	0.94	0.75	0.96	0.88	1.00	0.252622	1.000000	-
Rv0425c	ctpH	35	137.8	142.4	156.7	161.9	156.8	130.8	-0.179	-0.133	0.000	0.046	0.001	-0.251	174.3	158.2	192.4	180.9	182.9	157.9	0.79	0.90	0.81	0.90	0.86	0.83	0.726864	1.000000	-
Rv0426c	-	2	197.2	206.0	235.4	173.2	151.1	216.6	-0.249	-0.188	0.000	-0.432	-0.623	-0.118	197.2	206.0	235.4	173.2	151.1	216.6	1.00	1.00	1.00	1.00	1.00	1.00	0.730115	1.000000	-
Rv0427c	xthA	13	173.1	203.0	175.3	172.0	156.5	173.4	-0.018	0.206	0.000	-0.027	-0.158	-0.016	177.6	203.0	175.3	181.3	156.5	173.4	0.97	1.00	1.00	0.95	1.00	1.00	0.596454	1.000000	-
Rv0428c	-	12	115.1	92.2	86.5	90.1	92.2	124.4	0.393	0.088	0.000	0.057	0.088	0.501	121.8	96.2	98.8	98.3	92.2	124.4	0.94	0.96	0.88	0.92	1.00	1.00	0.210797	1.000000	-
Rv0429c	def	8	0.7	0.0	0.0	0.0	0.0	0.0	0.185	0.000	0.000	0.000	0.000	0.000	16.4	0.0	0.0	0.0	0.0	0.0	0.04	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0430	-	3	1.3	0.0	0.0	0.0	0.0	0.0	0.331	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.11	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0431	-	9	56.2	119.4	57.7	108.2	107.8	70.2	-0.034	0.989	0.000	0.853	0.847	0.264	69.0	153.5	86.5	139.1	129.3	79.0	0.81	0.78	0.67	0.78	0.83	0.89	0.072731	0.613524	-
Rv0432	sodC	12	283.1	286.9	259.9	241.6	230.2	255.9	0.121	0.140	0.000	-0.104	-0.172	-0.022	283.1	286.9	259.9	241.6	230.2	255.9	1.00	1.00	1.00	1.00	1.00	1.00	0.818331	1.000000	-
Rv0433	-	22	225.7	202.0	227.2	188.3	178.0	190.2	-0.009	-0.166	0.000	-0.265	-0.344	-0.250	225.7	222.2	232.5	207.2	206.1	190.2	1.00	0.91	0.98	0.91	0.86	1.00	0.019248	0.229250	-
Rv0434	-	13	260.0	191.0	221.0	199.2	224.2	215.4	0.229	-0.206	0.000	-0.147	0.020	-0.036	281.6	225.7	261.2	235.4	242.9	243.5	0.92	0.85	0.85	0.85	0.92	0.88	0.984265	1.000000	-
Rv0435c	-	21	255.4	232.4	232.4	203.4	230.3	231.8	0.133	0.000	0.000	-0.188	-0.013	-0.004	315.5	244.1	295.8	261.5	230.3	263.1	0.81	0.95	0.79	0.78	1.00	0.88	0.021414	0.250558	-
Rv0436c	pssA	16	248.5	274.5	197.7	233.4	234.5	246.4	0.322	0.464	0.000	0.234	0.241	0.310	248.5	274.5	197.7	233.4	234.5	246.4	1.00	1.00	1.00	1.00	1.00	1.00	0.660391	1.000000	-
Rv0437c	psd	8	208.8	282.5	173.1	191.6	238.2	205.8	0.263	0.691	0.000	0.143	0.449	0.243	294.7	282.5	213.0	209.0	272.2	299.4	0.71	1.00	0.81	0.92	0.88	0.69	0.197340	1.000000	-
Rv0438c	moeA2	13	245.6	192.7	221.4	188.1	204.8	228.1	0.147	-0.195	0.000	-0.229	-0.109	0.042	245.6	200.4	230.2	193.1	213.0	228.1	1.00	0.96	0.96	0.97	0.96	1.00	0.875814	1.000000	-
Rv0439c	-	18	259.4	219.9	248.6	230.9	194.8	208.4	0.060	-0.173	0.000	-0.104	-0.344	-0.249	298.0	247.4	319.6	265.3	212.5	220.7	0.87	0.89	0.78	0.87	0.92	0.94	0.834572	1.000000	-
Rv0440	groEL	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0441c	-	7	156.2	167.2	176.2	177.4	153.5	181.6	-0.169	-0.073	0.000	0.009	-0.193	0.042	156.2	167.2	176.2	177.4	179.1	181.6	1.00	1.00	1.00	1.00	0.86	1.00	0.494073	1.000000	-
Rv0442c	PPE10	22	194.1	205.4	212.9	187.9	195.6	198.2	-0.130	-0.051	0.000	-0.176	-0.120	-0.101	251.2	265.8	275.6	238.5	253.1	249.2	0.77	0.77	0.77	0.79	0.77	0.80	0.999889	1.000000	-
Rv0443	-	12	115.8	113.2	124.9	127.4	126.0	116.5	-0.104	-0.136	0.000	0.028	0.012	-0.097	115.8	118.2	136.3	131.1	131.5	127.1	1.00	0.96	0.92	0.97	0.96	0.92	0.677879	1.000000	-
Rv0444c	-	7	182.0	180.6	167.4	192.7	161.7	144.5	0.117	0.107	0.000	0.198	-0.049	-0.205	238.8	210.7	195.3	224.8	188.6	202.3	0.76	0.86	0.86	0.86	0.86	0.71	0.987670	1.000000	-
Rv0445c	sigK	10	247.7	250.2	236.1	258.7	293.7	280.8	0.068	0.082	0.000	0.129	0.309	0.246	247.7	278.0	236.1	258.7	293.7	295.6	1.00	0.90	1.00	1.00	1.00	0.95	0.361487	1.000000	-
Rv0446c	-	15	98.8	113.4	108.0	112.9	127.0	119.3	-0.123	0.067	0.000	0.060	0.223	0.137	101.0	113.4	108.0	112.9	127.0	119.3	0.98	1.00	1.00	1.00	1.00	1.00	0.885646	1.000000	-
Rv0447c	ufaA1	25	239.9	268.3	242.9	249.5	243.2	227.6	-0.017	0.141	0.000	0.038	0.002	-0.092	253.4	285.4	264.0	259.9	258.7	242.1	0.95	0.94	0.92	0.96	0.94	0.94	0.994516	1.000000	-
Rv0448c	-	13	216.3	206.2	223.9	210.9	206.3	198.1	-0.049	-0.116	0.000	-0.084	-0.116	-0.172	216.3	206.2	232.9	216.5	206.3	198.1	1.00	1.00	0.96	0.97	1.00	1.00	0.963130	1.000000	-
Rv0449c	-	23	212.7	198.7	214.0	204.8	212.8	189.9	-0.008	-0.104	0.000	-0.062	-0.008	-0.168	222.4	203.1	223.7	207.8	212.8	198.5	0.96	0.98	0.96	0.99	1.00	0.96	0.964548	1.000000	-
Rv0450c	mmpL4	77	39.1	52.4	65.4	64.0	71.8	50.2	-0.673	-0.293	0.000	-0.030	0.125	-0.352	68.5	76.2	106.0	92.3	104.3	67.8	0.57	0.69	0.62	0.69	0.69	0.74	0.000205	0.004859	-
Rv0451c	mmpS4	13	0.3	0.0	0.0	0.3	0.6	0.4	0.083	0.000	0.000	0.093	0.153	0.115	11.6	0.0	0.0	13.0	14.5	10.8	0.03	0.00	0.00	0.03	0.04	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0452	-	9	187.0	198.3	174.1	203.5	205.0	206.1	0.101	0.183	0.000	0.219	0.230	0.237	187.0	198.3	174.1	203.5	205.0	206.1	1.00	1.00	1.00	1.00	1.00	1.00	0.974129	1.000000	-
Rv0453	PPE11	21	233.7	227.2	186.6	220.2	210.7	222.6	0.317	0.277	0.000	0.233	0.171	0.248	245.4	227.2	223.9	227.4	221.2	233.7	0.95	1.00	0.83	0.97	0.95	0.95	0.334041	1.000000	-
Rv0454	-	6	324.2	330.5	275.4	326.8	346.9	312.1	0.231	0.258	0.000	0.243	0.328	0.177	324.2	330.5	275.4	326.8	346.9	312.1	1.00	1.00	1.00	1.00	1.00	1.00	0.987960	1.000000	-
Rv0455c	-	10	0.0	0.0	6.9	55.0	75.0	0.0	-1.255	-1.255	0.000	2.330	2.745	-1.255	0.0	0.0	23.1	66.0	88.2	0.0	0.00	0.00	0.30	0.83	0.85	0.00	0.000000	0.000000	-
Rv0456c	echA2	9	120.8	139.0	121.6	152.7	138.5	119.2	-0.010	0.186	0.000	0.316	0.180	-0.028	135.9	139.0	136.9	164.9	146.6	134.1	0.89	1.00	0.89	0.93	0.94	0.89	0.853429	1.000000	-
Rv0456A	-	4	182.1	200.4	196.0	190.8	197.6	212.1	-0.103	0.032	0.000	-0.038	0.012	0.112	182.1	200.4	223.9	254.4	197.6	212.1	1.00	1.00	0.88	0.75	1.00	1.00	0.386225	1.000000	-
Rv0457c	-	33	103.0	110.1	109.3	109.6	105.1	107.0	-0.081	0.009	0.000	0.003	-0.054	-0.029	120.0	132.1	141.5	135.6	113.7	117.7	0.86	0.83	0.77	0.81	0.92	0.91	0.459786	1.000000	-
Rv0458	-	18	154.5	148.9	152.3	152.6	144.1	153.3	0.020	-0.031	0.000	0.002	-0.077	0.009	173.8	167.6	176.9	164.8	167.4	162.3	0.89	0.89	0.86	0.93	0.86	0.94	0.993140	1.000000	-
Rv0459	-	5	218.9	170.9	195.8	196.6	189.5	198.3	0.157	-0.191	0.000	0.006	-0.046	0.018	218.9	170.9	195.8	196.6	189.5	198.3	1.00	1.00	1.00	1.00	1.00	1.00	0.988560	1.000000	-
Rv0460	-	2	185.9	184.0	114.1	110.5	151.2	179.4	0.680	0.666	0.000	-0.045	0.391	0.631	185.9	184.0	114.1	110.5	151.2	179.4	1.00	1.00	1.00	1.00	1.00	1.00	0.071531	0.605965	-
Rv0461	-	15	200.9	173.0	160.7	187.3	199.6	199.6	0.313	0.103	0.000	0.215	0.304	0.304	205.5	173.0	160.7	187.3	199.6	199.6	0.98	1.00	1.00	1.00	1.00	1.00	0.929912	1.000000	-
Rv0462	lpd	25	3.0	11.4	4.3	0.6	0.8	5.5	-0.207	0.822	0.000	-0.731	-0.686	0.185	20.6	19.0	23.7	14.5	12.7	18.4	0.15	0.60	0.18	0.04	0.06	0.30	0.000000	0.000000	-
Rv0463	-	3	265.4	203.5	273.7	249.4	356.8	295.4	-0.044	-0.418	0.000	-0.132	0.376	0.108	298.6	305.3	410.6	280.6	356.8	295.4	0.89	0.67	0.67	0.89	1.00	1.00	0.744339	1.000000	-
Rv0464c	-	14	77.6	111.3	99.0	119.6	119.1	102.5	-0.333	0.161	0.000	0.260	0.255	0.047	105.1	135.5	126.0	128.8	133.4	124.8	0.74	0.82	0.79	0.93	0.89	0.82	0.569671	1.000000	-
Rv0465c	-	24	190.4	206.0	193.2	174.7	148.5	218.4	-0.021	0.091	0.000	-0.141	-0.369	0.173	204.6	210.4	201.6	190.6	151.6	227.9	0.93	0.98	0.96	0.92	0.98	0.96	0.519367	1.000000	-
Rv0466	-	8	122.0	182.4	145.0	134.9	132.3	149.5	-0.240	0.321	0.000	-0.101	-0.128	0.043	139.4	208.4	165.7	140.8	141.1	149.5	0.88	0.88	0.88	0.96	0.94	1.00	0.787274	1.000000	-
Rv0467	icl	18	377.2	82.7	345.6	115.6	98.2	82.5	0.124	-1.999	0.000	-1.539	-1.765	-2.003	377.2	90.2	355.5	124.9	110.5	95.8	1.00	0.92	0.97	0.93	0.89	0.86	0.000000	0.000000	-
Rv0468	fadB2	10	57.9	68.8	67.0	49.0	53.3	72.4	-0.194	0.035	0.000	-0.414	-0.304	0.106	86.9	98.2	111.6	73.5	82.0	96.6	0.67	0.70	0.60	0.67	0.65	0.75	0.991626	1.000000	-
Rv0469	umaA	21	49.7	59.6	53.8	64.1	57.5	64.4	-0.105	0.137	0.000	0.234	0.088	0.239	76.3	83.5	80.7	79.2	69.0	73.1	0.65	0.71	0.67	0.81	0.83	0.88	0.498682	1.000000	-
Rv0470c	pcaA	10	88.2	174.8	84.9	185.5	200.5	151.1	0.052	1.001	0.000	1.084	1.193	0.796	94.5	174.8	89.3	185.5	200.5	151.1	0.93	1.00	0.95	1.00	1.00	1.00	0.002563	0.045246	-
Rv0470A	-	11	578.5	559.8	509.1	490.5	492.4	502.1	0.183	0.136	0.000	-0.053	-0.048	-0.020	578.5	559.8	509.1	490.5	492.4	552.3	1.00	1.00	1.00	1.00	1.00	0.91	0.510447	1.000000	-
Rv0471c	-	11	616.4	564.7	566.0	559.7	518.4	555.0	0.122	-0.003	0.000	-0.016	-0.126	-0.028	678.0	564.7	566.0	615.7	518.4	610.5	0.91	1.00	1.00	0.91	1.00	0.91	0.451331	1.000000	-
Rv0472c	-	9	88.3	140.0	78.6	64.0	77.4	150.1	0.158	0.794	0.000	-0.276	-0.021	0.892	99.3	148.2	101.1	66.5	81.9	150.1	0.89	0.94	0.78	0.96	0.94	1.00	0.009970	0.138612	-
Rv0473	-	14	277.0	251.3	204.8	216.8	218.3	235.7	0.426	0.289	0.000	0.080	0.090	0.198	290.8	251.3	229.4	222.1	218.3	244.5	0.95	1.00	0.89	0.98	1.00	0.96	0.705269	1.000000	-
Rv0474	-	7	352.5	359.7	324.0	351.8	344.8	369.2	0.120	0.148	0.000	0.117	0.088	0.186	352.5	359.7	324.0	351.8	344.8	369.2	1.00	1.00	1.00	1.00	1.00	1.00	0.996477	1.000000	-
Rv0475	hbhA	9	293.4	283.1	254.6	270.1	250.1	295.6	0.201	0.150	0.000	0.084	-0.025	0.212	293.4	283.1	254.6	270.1	250.1	295.6	1.00	1.00	1.00	1.00	1.00	1.00	0.942036	1.000000	-
Rv0476	-	5	287.3	288.3	271.5	276.8	276.1	251.4	0.080	0.085	0.000	0.027	0.024	-0.109	287.3	288.3	301.6	276.8	276.1	251.4	1.00	1.00	0.90	1.00	1.00	1.00	0.952932	1.000000	-
Rv0477	-	5	570.4	503.8	582.8	458.6	466.5	472.3	-0.031	-0.208	0.000	-0.342	-0.318	-0.300	570.4	503.8	582.8	458.6	466.5	472.3	1.00	1.00	1.00	1.00	1.00	1.00	0.303233	1.000000	-
Rv0478	deoC	3	217.2	175.3	196.9	155.3	216.3	242.1	0.139	-0.163	0.000	-0.332	0.133	0.292	244.4	210.4	196.9	199.7	259.6	242.1	0.89	0.83	1.00	0.78	0.83	1.00	0.870949	1.000000	-
Rv0479c	-	12	46.6	28.0	35.5	39.1	30.6	25.2	0.348	-0.296	0.000	0.123	-0.186	-0.423	209.6	335.8	284.1	469.4	183.6	302.5	0.22	0.08	0.12	0.08	0.17	0.08	0.719981	1.000000	-
Rv0480c	-	14	184.2	200.0	188.7	187.8	167.8	188.7	-0.034	0.082	0.000	-0.006	-0.164	0.000	203.6	207.4	211.3	187.8	180.7	211.4	0.90	0.96	0.89	1.00	0.93	0.89	0.616873	1.000000	-
Rv0481c	-	11	186.9	174.9	185.5	170.0	196.6	193.6	0.010	-0.083	0.000	-0.123	0.081	0.060	186.9	174.9	194.4	170.0	196.6	193.6	1.00	1.00	0.95	1.00	1.00	1.00	0.920041	1.000000	-
Rv0482	murB	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0483	lprQ	24	345.0	358.8	325.5	332.8	349.2	314.0	0.082	0.138	0.000	0.031	0.100	-0.051	354.8	358.8	332.5	342.3	349.2	314.0	0.97	1.00	0.98	0.97	1.00	1.00	0.846579	1.000000	-
Rv0484c	-	8	507.2	396.6	377.8	404.3	374.8	333.9	0.420	0.069	0.000	0.097	-0.011	-0.176	553.3	453.2	402.9	462.1	428.3	410.9	0.92	0.88	0.94	0.88	0.88	0.81	0.975789	1.000000	-
Rv0485	-	21	139.9	134.1	113.1	102.1	93.9	138.3	0.295	0.237	0.000	-0.140	-0.255	0.279	154.6	152.3	121.8	114.9	106.6	141.7	0.90	0.88	0.93	0.89	0.88	0.98	0.456916	1.000000	-
Rv0486	-	11	331.2	203.3	353.8	124.7	142.7	239.9	-0.094	-0.784	0.000	-1.468	-1.281	-0.551	331.2	203.3	370.6	137.2	149.5	239.9	1.00	1.00	0.95	0.91	0.95	1.00	0.004566	0.072589	-
Rv0487	-	9	419.3	370.2	376.3	297.5	257.5	348.4	0.154	-0.023	0.000	-0.334	-0.539	-0.109	419.3	370.2	376.3	297.5	257.5	348.4	1.00	1.00	1.00	1.00	1.00	1.00	0.213011	1.000000	-
Rv0488	-	9	192.3	211.6	209.1	218.4	203.4	184.1	-0.118	0.017	0.000	0.061	-0.039	-0.179	192.3	211.6	209.1	218.4	203.4	184.1	1.00	1.00	1.00	1.00	1.00	1.00	0.981231	1.000000	-
Rv0489	gpm1	11	20.1	7.9	11.9	0.4	1.2	1.4	0.571	-0.397	0.000	-1.650	-1.443	-1.400	36.9	24.7	29.2	13.0	27.0	15.6	0.55	0.32	0.41	0.03	0.05	0.09	0.000001	0.000019	-
Rv0490	senX3	16	183.4	165.1	169.2	176.9	159.6	169.3	0.113	-0.034	0.000	0.063	-0.082	0.001	214.7	176.1	200.5	184.6	176.1	193.5	0.85	0.94	0.84	0.96	0.91	0.88	0.897909	1.000000	-
Rv0491	regX3	8	379.1	359.9	392.3	376.9	337.6	365.6	-0.049	-0.123	0.000	-0.057	-0.214	-0.101	413.6	411.3	448.4	393.3	337.6	365.6	0.92	0.88	0.88	0.96	1.00	1.00	0.826400	1.000000	-
Rv0492c	-	14	492.6	450.5	444.6	455.4	407.9	368.0	0.146	0.019	0.000	0.034	-0.123	-0.269	544.4	485.2	444.6	503.4	439.3	396.3	0.90	0.93	1.00	0.90	0.93	0.93	0.694131	1.000000	-
Rv0492A	-	4	524.1	448.7	424.5	418.6	387.8	480.8	0.301	0.079	0.000	-0.020	-0.129	0.178	524.1	448.7	424.5	418.6	387.8	480.8	1.00	1.00	1.00	1.00	1.00	1.00	0.831888	1.000000	-
Rv0493c	-	16	237.5	202.3	219.8	191.5	214.7	235.7	0.109	-0.117	0.000	-0.194	-0.033	0.098	259.1	215.8	242.6	195.6	214.7	243.3	0.92	0.94	0.91	0.98	1.00	0.97	0.652466	1.000000	-
Rv0494	-	6	206.9	194.1	196.7	233.4	189.5	203.0	0.072	-0.019	0.000	0.241	-0.052	0.044	206.9	194.1	196.7	233.4	189.5	203.0	1.00	1.00	1.00	1.00	1.00	1.00	0.988234	1.000000	-
Rv0495c	-	11	64.4	64.9	71.5	40.9	49.1	66.2	-0.141	-0.130	0.000	-0.738	-0.499	-0.104	88.6	64.9	98.4	64.3	60.1	76.7	0.73	1.00	0.73	0.64	0.82	0.86	0.081465	0.663356	-
Rv0496	-	8	211.6	236.9	188.9	200.8	219.6	215.4	0.160	0.319	0.000	0.086	0.212	0.185	211.6	236.9	188.9	200.8	219.6	215.4	1.00	1.00	1.00	1.00	1.00	1.00	0.987427	1.000000	-
Rv0497	-	12	105.1	125.3	113.5	136.5	188.8	115.8	-0.105	0.137	0.000	0.255	0.709	0.028	118.3	125.3	123.8	140.3	188.8	115.8	0.89	1.00	0.92	0.97	1.00	1.00	0.192848	1.000000	-
Rv0498	-	12	255.7	286.3	235.6	273.2	247.9	262.5	0.116	0.276	0.000	0.210	0.072	0.153	263.0	286.3	245.8	273.2	283.3	262.5	0.97	1.00	0.96	1.00	0.88	1.00	0.379664	1.000000	-
Rv0499	-	5	175.5	167.4	187.6	185.8	167.8	153.8	-0.094	-0.160	0.000	-0.014	-0.157	-0.279	175.5	167.4	187.6	185.8	167.8	153.8	1.00	1.00	1.00	1.00	1.00	1.00	0.795281	1.000000	-
Rv0500	proC	11	19.3	17.0	12.3	25.3	18.3	22.4	0.493	0.353	0.000	0.814	0.432	0.667	37.4	25.0	27.0	36.4	26.8	32.8	0.52	0.68	0.45	0.70	0.68	0.68	0.493196	1.000000	-
Rv0500A	-	3	25.2	42.3	52.0	39.5	50.5	45.5	-0.917	-0.268	0.000	-0.359	-0.038	-0.176	37.8	42.3	62.4	50.7	60.6	54.5	0.67	1.00	0.83	0.78	0.83	0.83	0.848912	1.000000	-
Rv0500B	-	1	113.0	61.9	118.7	74.2	74.9	76.4	-0.068	-0.887	0.000	-0.644	-0.631	-0.605	113.0	61.9	118.7	74.2	74.9	76.4	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0501	galE2	22	139.0	169.8	144.0	161.2	169.3	165.5	-0.050	0.230	0.000	0.157	0.226	0.194	152.9	177.9	158.4	168.9	177.3	169.3	0.91	0.95	0.91	0.95	0.95	0.98	0.851050	1.000000	-
Rv0502	-	16	164.5	188.9	152.1	184.0	195.0	204.8	0.109	0.303	0.000	0.266	0.348	0.417	192.6	215.9	180.3	205.4	231.1	252.0	0.85	0.88	0.84	0.90	0.84	0.81	0.750628	1.000000	-
Rv0503c	cmaA2	19	177.9	238.7	246.1	270.8	296.0	178.4	-0.457	-0.043	0.000	0.135	0.262	-0.453	181.1	238.7	259.7	270.8	296.0	178.4	0.98	1.00	0.95	1.00	1.00	1.00	0.117276	0.805391	-
Rv0504c	-	8	9.7	12.1	14.5	22.5	41.8	3.8	-0.412	-0.196	0.000	0.490	1.261	-1.153	25.8	24.1	33.3	33.7	47.8	15.2	0.38	0.50	0.44	0.67	0.88	0.25	0.001100	0.021723	-
Rv0505c	serB1	19	56.6	79.5	61.2	62.2	71.3	70.5	-0.103	0.352	0.000	0.022	0.205	0.190	70.2	91.5	72.7	73.9	84.7	83.7	0.81	0.87	0.84	0.84	0.84	0.84	0.804803	1.000000	-
Rv0506	mmpS2	8	173.2	179.2	158.7	128.4	156.9	187.0	0.123	0.170	0.000	-0.295	-0.016	0.230	173.2	179.2	158.7	128.4	156.9	187.0	1.00	1.00	1.00	1.00	1.00	1.00	0.616107	1.000000	-
Rv0507	mmpL2	79	82.4	79.8	77.9	77.4	81.3	88.5	0.077	0.033	0.000	-0.009	0.059	0.173	126.9	108.7	118.3	110.5	109.8	121.5	0.65	0.73	0.66	0.70	0.74	0.73	0.953541	1.000000	-
Rv0508	-	5	77.3	69.2	60.1	64.2	50.9	134.3	0.338	0.188	0.000	0.087	-0.220	1.098	89.2	76.8	66.8	64.2	63.6	167.9	0.87	0.90	0.90	1.00	0.80	0.80	0.001246	0.024243	-
Rv0509	hemA	19	1.7	1.9	2.0	111.8	98.5	21.7	-0.060	-0.019	0.000	4.068	3.894	1.940	24.0	14.2	24.9	111.8	101.2	25.0	0.07	0.13	0.08	1.00	0.97	0.87	0.000000	0.000000	-
Rv0510	hemC	10	0.5	1.0	0.6	141.1	142.1	36.0	-0.022	0.097	0.000	4.697	4.707	2.864	16.4	10.2	12.6	151.1	157.9	42.3	0.03	0.10	0.05	0.93	0.90	0.85	0.000000	0.000000	-
Rv0511	hemD	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0512	hemB	18	1.1	0.6	0.9	100.8	109.5	19.6	0.046	-0.074	0.000	4.174	4.288	2.068	18.9	10.2	31.0	108.8	123.2	24.3	0.06	0.06	0.03	0.93	0.89	0.81	0.000000	0.000000	-
Rv0513	-	6	102.1	131.2	95.8	140.1	145.6	137.6	0.087	0.435	0.000	0.526	0.579	0.500	102.1	131.2	95.8	140.1	145.6	137.6	1.00	1.00	1.00	1.00	1.00	1.00	0.021589	0.251868	-
Rv0514	-	1	753.1	737.6	743.8	902.6	808.7	912.0	0.018	-0.012	0.000	0.278	0.120	0.292	753.1	737.6	743.8	902.6	808.7	912.0	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0515	-	18	321.1	323.2	305.2	329.8	289.2	295.0	0.072	0.082	0.000	0.110	-0.076	-0.048	333.4	323.2	313.9	329.8	289.2	295.0	0.96	1.00	0.97	1.00	1.00	1.00	0.824171	1.000000	-
Rv0516c	-	6	161.1	178.5	152.1	143.3	146.9	139.7	0.081	0.225	0.000	-0.083	-0.048	-0.118	223.1	214.2	202.7	214.9	220.4	152.4	0.72	0.83	0.75	0.67	0.67	0.92	0.932026	1.000000	-
Rv0517	-	17	263.9	273.2	273.9	276.2	252.2	265.0	-0.053	-0.004	0.000	0.012	-0.117	-0.047	269.2	273.2	273.9	276.2	252.2	265.0	0.98	1.00	1.00	1.00	1.00	1.00	0.975935	1.000000	-
Rv0518	-	10	183.8	188.2	163.9	184.2	203.1	192.3	0.160	0.194	0.000	0.164	0.301	0.224	239.7	198.1	234.2	240.2	239.0	213.7	0.77	0.95	0.70	0.77	0.85	0.90	0.813318	1.000000	-
Rv0519c	-	7	308.6	258.7	292.3	281.6	257.6	268.0	0.077	-0.173	0.000	-0.053	-0.179	-0.123	381.3	258.7	409.2	369.6	300.6	312.7	0.81	1.00	0.71	0.76	0.86	0.86	0.692995	1.000000	-
Rv0520	-	4	148.4	157.3	143.4	148.0	153.0	197.5	0.048	0.130	0.000	0.045	0.091	0.449	148.4	157.3	163.9	148.0	153.0	197.5	1.00	1.00	0.88	1.00	1.00	1.00	0.852420	1.000000	-
Rv0521	-	4	46.2	68.4	58.6	42.8	70.9	55.4	-0.314	0.207	0.000	-0.412	0.253	-0.076	46.2	68.4	58.6	42.8	70.9	55.4	1.00	1.00	1.00	1.00	1.00	1.00	0.345952	1.000000	-
Rv0522	gabP	19	165.6	160.3	138.9	146.9	138.0	167.3	0.245	0.200	0.000	0.078	-0.010	0.260	178.1	164.7	146.6	149.5	138.0	167.3	0.93	0.97	0.95	0.98	1.00	1.00	0.568965	1.000000	-
Rv0523c	-	7	140.8	112.9	125.8	136.8	123.9	127.1	0.157	-0.149	0.000	0.117	-0.021	0.015	173.9	112.9	160.1	151.3	123.9	136.9	0.81	1.00	0.79	0.90	1.00	0.93	0.528569	1.000000	-
Rv0524	hemL	20	0.5	3.6	2.5	14.3	17.3	15.7	-0.455	0.197	0.000	1.368	1.572	1.463	14.0	13.0	24.9	33.1	32.9	31.3	0.03	0.28	0.10	0.43	0.53	0.50	0.000000	0.000000	-
Rv0525	-	9	1.7	2.8	0.0	0.0	0.0	0.0	0.421	0.636	0.000	0.000	0.000	0.000	15.3	16.6	0.0	0.0	0.0	0.0	0.11	0.17	0.00	0.00	0.00	0.00	0.046096	0.450796	-
Rv0526	-	7	9.8	17.3	8.0	4.7	2.7	15.2	0.185	0.778	0.000	-0.423	-0.756	0.635	20.6	22.1	22.5	16.5	12.7	17.8	0.48	0.79	0.36	0.29	0.21	0.86	0.002717	0.047545	-
Rv0527	ccdA	5	8.0	2.0	9.4	0.0	1.5	5.3	-0.150	-1.032	0.000	-1.526	-1.159	-0.489	17.1	10.2	23.5	0.0	14.5	10.5	0.47	0.20	0.40	0.00	0.10	0.50	0.007717	0.111964	-
Rv0528	-	15	5.9	6.8	3.7	0.6	0.3	5.6	0.319	0.429	0.000	-0.631	-0.723	0.275	20.5	15.6	28.1	14.6	9.0	15.2	0.29	0.43	0.13	0.04	0.03	0.37	0.000022	0.000646	-
Rv0529	ccsA	15	3.2	3.7	2.9	0.6	0.3	3.0	0.039	0.137	0.000	-0.494	-0.584	0.004	23.7	22.4	17.7	14.4	9.0	14.8	0.13	0.17	0.17	0.04	0.03	0.20	0.149121	0.942781	-
Rv0530	-	16	177.3	168.1	205.7	166.7	153.9	158.3	-0.208	-0.283	0.000	-0.295	-0.407	-0.367	207.6	179.3	243.7	177.8	169.8	181.0	0.85	0.94	0.84	0.94	0.91	0.88	0.902263	1.000000	-
Rv0531	-	2	80.4	79.0	59.0	30.3	23.5	65.2	0.415	0.391	0.000	-0.861	-1.169	0.131	80.4	79.0	59.0	36.3	23.5	65.2	1.00	1.00	1.00	0.83	1.00	1.00	0.098361	0.736323	-
Rv0532	PE_PGRS6	14	202.3	180.4	182.9	197.4	175.3	163.3	0.141	-0.019	0.000	0.107	-0.060	-0.159	283.2	210.5	269.6	267.5	223.2	207.8	0.71	0.86	0.68	0.74	0.79	0.79	0.972015	1.000000	-
Rv0533c	fabH	13	311.4	263.9	298.2	294.6	307.8	255.7	0.062	-0.173	0.000	-0.017	0.045	-0.218	337.4	285.9	323.0	294.6	320.1	277.0	0.92	0.92	0.92	1.00	0.96	0.92	0.862415	1.000000	-
Rv0534c	menA	11	5.3	5.1	14.5	0.8	0.0	6.0	-0.920	-0.950	0.000	-1.742	-1.966	-0.827	22.0	12.5	29.1	13.9	0.0	16.5	0.24	0.41	0.50	0.06	0.00	0.36	0.000004	0.000129	-
Rv0535	pnp	9	202.7	212.5	205.3	224.2	172.6	185.6	-0.018	0.049	0.000	0.125	-0.244	-0.142	237.9	273.2	246.3	232.9	172.6	208.8	0.85	0.78	0.83	0.96	1.00	0.89	0.492797	1.000000	-
Rv0536	galE3	12	120.8	107.5	146.8	118.3	113.1	77.8	-0.270	-0.432	0.000	-0.300	-0.362	-0.873	120.8	107.5	146.8	121.6	113.1	81.2	1.00	1.00	1.00	0.97	1.00	0.96	0.056613	0.513374	-
Rv0537c	-	18	224.0	212.9	210.8	220.9	204.1	213.0	0.086	0.014	0.000	0.066	-0.046	0.015	246.9	225.4	229.9	233.9	216.1	219.1	0.91	0.94	0.92	0.94	0.94	0.97	0.999304	1.000000	-
Rv0538	-	14	187.2	211.7	223.4	221.9	216.9	204.9	-0.249	-0.076	0.000	-0.010	-0.042	-0.122	206.9	228.0	223.4	238.9	233.6	220.6	0.90	0.93	1.00	0.93	0.93	0.93	0.776771	1.000000	-
Rv0539	-	6	54.8	65.3	61.0	46.2	56.1	64.8	-0.142	0.091	0.000	-0.365	-0.111	0.082	70.4	78.3	81.3	59.4	67.3	77.8	0.78	0.83	0.75	0.78	0.83	0.83	0.998970	1.000000	-
Rv0540	-	10	141.3	136.3	172.4	162.7	128.0	137.7	-0.279	-0.329	0.000	-0.082	-0.417	-0.314	157.0	143.5	181.5	168.3	134.7	162.0	0.90	0.95	0.95	0.97	0.95	0.85	0.934666	1.000000	-
Rv0541c	-	17	0.0	1.8	1.5	3.3	3.6	0.9	-0.375	0.063	0.000	0.359	0.410	-0.133	0.0	12.1	16.8	18.8	17.6	10.3	0.00	0.15	0.09	0.18	0.21	0.09	0.013454	0.175423	-
Rv0542c	menE	14	5.9	2.5	6.3	0.0	0.5	1.1	-0.044	-0.585	0.000	-1.172	-1.030	-0.883	19.2	11.7	21.9	0.0	14.5	10.3	0.31	0.21	0.29	0.00	0.04	0.11	0.000007	0.000237	-
Rv0543c	-	2	0.0	2.6	0.0	0.0	3.6	0.0	0.000	0.604	0.000	0.000	0.787	0.000	0.0	10.4	0.0	0.0	14.5	0.0	0.00	0.25	0.00	0.00	0.25	0.00	0.634312	1.000000	-
Rv0544c	-	6	257.8	303.8	257.1	403.8	371.2	320.2	0.004	0.237	0.000	0.642	0.522	0.312	290.0	331.4	257.1	403.8	371.2	320.2	0.89	0.92	1.00	1.00	1.00	1.00	0.565587	1.000000	-
Rv0545c	pitA	14	144.8	185.3	142.6	273.6	252.1	140.1	0.021	0.366	0.000	0.916	0.801	-0.024	160.0	216.1	166.4	294.6	282.3	163.5	0.90	0.86	0.86	0.93	0.89	0.86	0.066892	0.580218	-
Rv0546c	-	7	65.2	56.1	74.1	78.8	80.1	89.1	-0.173	-0.373	0.000	0.083	0.104	0.250	65.2	60.4	79.8	78.8	80.1	95.9	1.00	0.93	0.93	1.00	1.00	0.93	0.257717	1.000000	-
Rv0547c	-	10	176.9	162.3	157.3	159.7	152.7	157.0	0.164	0.044	0.000	0.021	-0.042	-0.002	176.9	162.3	157.3	159.7	152.7	157.0	1.00	1.00	1.00	1.00	1.00	1.00	0.985484	1.000000	-
Rv0548c	menB	10	4.2	6.6	4.1	0.0	1.5	2.5	0.016	0.355	0.000	-0.859	-0.492	-0.276	15.6	12.0	20.3	0.0	14.5	10.0	0.27	0.55	0.20	0.00	0.10	0.25	0.000196	0.004689	-
Rv0549c	-	4	376.9	345.7	310.4	406.7	283.8	324.7	0.276	0.153	0.000	0.384	-0.127	0.064	376.9	345.7	310.4	406.7	283.8	324.7	1.00	1.00	1.00	1.00	1.00	1.00	0.495864	1.000000	-
Rv0550c	-	3	381.5	294.0	322.7	290.1	253.8	232.4	0.238	-0.132	0.000	-0.151	-0.340	-0.465	381.5	352.8	322.7	290.1	253.8	232.4	1.00	0.83	1.00	1.00	1.00	1.00	0.853789	1.000000	-
Rv0551c	fadD8	28	171.5	170.3	168.6	166.1	182.9	185.6	0.024	0.014	0.000	-0.021	0.114	0.135	175.7	183.4	174.8	174.4	193.2	192.5	0.98	0.93	0.96	0.95	0.95	0.96	0.826948	1.000000	-
Rv0552	-	18	232.2	227.2	225.7	225.2	217.6	246.4	0.040	0.010	0.000	-0.003	-0.052	0.124	236.6	247.9	238.9	233.8	230.4	260.9	0.98	0.92	0.94	0.96	0.94	0.94	0.930418	1.000000	-
Rv0553	menC	7	7.1	7.9	8.5	0.0	1.3	2.8	-0.164	-0.065	0.000	-1.435	-1.105	-0.796	21.2	15.9	19.9	0.0	18.0	13.0	0.33	0.50	0.43	0.00	0.07	0.21	0.003083	0.053256	-
Rv0554	bpoC	13	181.9	162.0	168.9	136.7	118.0	207.4	0.104	-0.058	0.000	-0.295	-0.499	0.289	186.7	175.5	175.7	136.7	127.9	207.4	0.97	0.92	0.96	1.00	0.92	1.00	0.102486	0.747565	-
Rv0555	menD	15	1.4	2.0	1.3	0.0	0.5	1.0	0.031	0.163	0.000	-0.324	-0.191	-0.064	15.7	12.1	12.6	0.0	14.5	9.9	0.09	0.17	0.10	0.00	0.03	0.10	0.159347	0.976641	-
Rv0556	-	12	1.4	0.0	2.9	1.5	2.5	4.2	-0.292	-0.654	0.000	-0.269	-0.073	0.229	25.7	0.0	22.9	18.4	19.8	50.7	0.06	0.00	0.12	0.08	0.12	0.08	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0557	pimB	13	41.3	33.0	57.1	49.1	60.8	40.1	-0.424	-0.708	0.000	-0.199	0.083	-0.463	73.2	57.2	61.9	59.8	75.3	54.8	0.56	0.58	0.92	0.82	0.81	0.73	0.025868	0.285905	-
Rv0558	ubiE	13	4.1	14.1	4.3	4.3	11.6	4.2	-0.040	1.034	0.000	0.003	0.832	-0.020	19.8	19.3	22.5	16.9	18.8	12.1	0.21	0.73	0.19	0.26	0.62	0.35	0.000176	0.004293	-
Rv0559c	-	6	180.7	199.8	191.4	174.9	216.8	205.5	-0.081	0.060	0.000	-0.127	0.175	0.100	180.7	199.8	208.8	174.9	216.8	205.5	1.00	1.00	0.92	1.00	1.00	1.00	0.887683	1.000000	-
Rv0560c	-	12	94.0	108.2	102.2	102.6	123.7	99.5	-0.115	0.078	0.000	0.004	0.264	-0.037	112.8	144.3	122.7	111.9	148.5	132.7	0.83	0.75	0.83	0.92	0.83	0.75	0.436928	1.000000	-
Rv0561c	-	18	165.1	131.0	167.8	119.4	123.0	125.2	-0.022	-0.345	0.000	-0.474	-0.433	-0.408	182.0	152.2	183.0	137.1	134.2	140.9	0.91	0.86	0.92	0.87	0.92	0.89	0.920990	1.000000	-
Rv0562	grcC1	13	0.0	3.1	1.2	0.0	0.6	0.4	-0.309	0.388	0.000	-0.309	-0.156	-0.193	0.0	13.4	31.0	0.0	14.5	10.8	0.00	0.23	0.04	0.00	0.04	0.04	0.039180	0.401402	-
Rv0563	htpX	11	214.2	258.0	222.3	421.0	469.0	190.4	-0.053	0.210	0.000	0.906	1.060	-0.219	220.9	270.3	222.3	421.0	469.0	190.4	0.97	0.95	1.00	1.00	1.00	1.00	0.000064	0.001699	-
Rv0564c	gpsA	10	228.9	187.7	181.6	210.5	161.4	166.6	0.326	0.046	0.000	0.208	-0.165	-0.121	254.4	187.7	201.7	233.9	179.3	166.6	0.90	1.00	0.90	0.90	0.90	1.00	0.500048	1.000000	-
Rv0565c	-	34	170.6	188.7	158.1	184.3	185.1	180.0	0.106	0.248	0.000	0.215	0.221	0.181	195.5	210.3	182.2	200.0	199.8	191.2	0.87	0.90	0.87	0.92	0.93	0.94	0.935206	1.000000	-
Rv0566c	-	4	16.0	20.5	18.8	18.8	15.1	36.3	-0.178	0.101	0.000	0.000	-0.243	0.795	38.5	32.8	25.0	32.2	24.2	36.3	0.42	0.62	0.75	0.58	0.62	1.00	0.233014	1.000000	-
Rv0567	-	16	180.9	162.6	157.9	155.0	155.7	188.3	0.191	0.041	0.000	-0.026	-0.020	0.247	184.8	162.6	168.4	158.3	166.1	200.9	0.98	1.00	0.94	0.98	0.94	0.94	0.610138	1.000000	-
Rv0568	cyp135B1	12	280.4	242.5	257.5	255.3	207.1	248.6	0.121	-0.085	0.000	-0.012	-0.308	-0.050	315.5	291.0	309.0	306.4	248.5	298.3	0.89	0.83	0.83	0.83	0.83	0.83	0.996580	1.000000	-
Rv0569	-	3	392.8	379.1	319.0	368.8	329.6	354.3	0.296	0.245	0.000	0.206	0.046	0.149	392.8	379.1	319.0	368.8	329.6	354.3	1.00	1.00	1.00	1.00	1.00	1.00	0.877105	1.000000	-
Rv0570	nrdZ	34	125.7	110.2	127.5	127.0	120.9	119.9	-0.020	-0.202	0.000	-0.006	-0.074	-0.086	150.8	124.9	144.5	150.6	146.8	143.0	0.83	0.88	0.88	0.84	0.82	0.84	0.923444	1.000000	-
Rv0571c	-	12	63.5	46.3	53.9	58.5	48.5	51.7	0.219	-0.200	0.000	0.108	-0.138	-0.055	71.5	65.3	64.6	67.9	61.2	65.3	0.89	0.71	0.83	0.86	0.79	0.79	0.842383	1.000000	-
Rv0572c	-	7	185.3	156.6	148.7	139.6	162.3	185.7	0.308	0.073	0.000	-0.088	0.123	0.311	185.3	156.6	173.5	146.6	162.3	185.7	1.00	1.00	0.86	0.95	1.00	1.00	0.691040	1.000000	-
Rv0573c	-	14	190.4	171.4	169.5	201.7	192.1	164.2	0.163	0.015	0.000	0.244	0.176	-0.045	199.9	171.4	175.8	201.7	192.1	170.3	0.95	1.00	0.96	1.00	1.00	0.96	0.754924	1.000000	-
Rv0574c	-	19	154.4	176.1	148.6	176.0	147.8	148.9	0.054	0.237	0.000	0.237	-0.007	0.003	160.0	209.1	171.1	209.0	165.2	157.2	0.96	0.84	0.87	0.84	0.89	0.95	0.184029	1.000000	-
Rv0575c	-	11	408.3	364.8	424.5	342.8	323.2	301.6	-0.056	-0.216	0.000	-0.305	-0.388	-0.487	464.6	401.3	467.0	377.1	355.5	331.7	0.88	0.91	0.91	0.91	0.91	0.91	0.998995	1.000000	-
Rv0576	-	18	140.0	145.1	128.5	129.3	142.0	126.6	0.119	0.169	0.000	0.009	0.138	-0.020	171.9	158.3	159.5	145.5	154.9	134.1	0.81	0.92	0.81	0.89	0.92	0.94	0.882768	1.000000	-
Rv0577	TB27.3	12	60.6	50.5	50.6	48.9	53.5	66.2	0.238	-0.003	0.000	-0.045	0.072	0.357	87.2	80.8	86.8	76.6	85.6	83.7	0.69	0.62	0.58	0.64	0.62	0.79	0.975105	1.000000	-
Rv0578c	PE_PGRS7	23	132.6	161.7	130.5	144.6	127.6	136.8	0.022	0.299	0.000	0.142	-0.031	0.065	179.4	190.8	162.2	163.5	177.9	179.8	0.74	0.85	0.80	0.88	0.72	0.76	0.460926	1.000000	-
Rv0579	-	11	138.8	109.5	115.9	130.9	140.3	152.2	0.250	-0.079	0.000	0.168	0.266	0.379	143.1	114.7	121.4	130.9	140.3	152.2	0.97	0.95	0.95	1.00	1.00	1.00	0.883431	1.000000	-
Rv0580c	-	7	250.7	165.9	200.8	188.3	175.6	191.6	0.313	-0.268	0.000	-0.091	-0.189	-0.066	250.7	178.6	200.8	188.3	175.6	191.6	1.00	0.93	1.00	1.00	1.00	1.00	0.731020	1.000000	-
Rv0581	-	4	409.4	315.7	384.7	362.7	352.6	289.9	0.089	-0.281	0.000	-0.084	-0.124	-0.402	409.4	315.7	384.7	362.7	352.6	289.9	1.00	1.00	1.00	1.00	1.00	1.00	0.923545	1.000000	-
Rv0582	-	9	55.9	54.8	50.7	45.6	71.2	64.7	0.129	0.104	0.000	-0.138	0.452	0.323	62.9	70.5	50.7	58.6	80.1	72.7	0.89	0.78	1.00	0.78	0.89	0.89	0.071309	0.605368	-
Rv0583c	lpqN	7	99.6	156.9	136.7	146.0	131.4	131.4	-0.438	0.192	0.000	0.091	-0.056	-0.055	130.7	219.7	191.4	204.3	153.3	153.3	0.76	0.71	0.71	0.71	0.86	0.86	0.762954	1.000000	-
Rv0584	-	56	110.9	97.5	108.9	95.3	97.7	103.4	0.026	-0.152	0.000	-0.184	-0.149	-0.071	128.5	110.3	128.4	112.7	115.2	117.0	0.86	0.88	0.85	0.85	0.85	0.88	0.968229	1.000000	-
Rv0585c	-	34	110.1	85.2	94.7	87.5	78.4	90.1	0.208	-0.144	0.000	-0.108	-0.258	-0.068	145.9	113.7	126.3	116.0	93.5	120.1	0.75	0.75	0.75	0.75	0.84	0.75	0.768649	1.000000	-
Rv0586	-	10	36.2	36.1	43.5	49.4	46.9	43.4	-0.237	-0.238	0.000	0.165	0.096	-0.003	63.9	42.5	58.0	70.6	55.1	54.3	0.57	0.85	0.75	0.70	0.85	0.80	0.544234	1.000000	-
Rv0587	yrbE2A	11	63.7	47.3	70.1	51.9	47.6	51.2	-0.127	-0.521	0.000	-0.401	-0.514	-0.418	70.1	47.3	73.4	57.0	49.8	66.2	0.91	1.00	0.95	0.91	0.95	0.77	0.145196	0.930416	-
Rv0588	yrbE2B	13	82.5	71.0	71.6	73.5	75.2	61.9	0.191	-0.013	0.000	0.034	0.065	-0.197	103.8	97.1	98.0	86.8	97.7	89.3	0.79	0.73	0.73	0.85	0.77	0.69	0.935320	1.000000	-
Rv0589	mce2A	23	51.7	60.7	59.1	40.2	41.4	45.5	-0.177	0.034	0.000	-0.505	-0.467	-0.344	91.5	93.0	93.8	74.9	54.4	65.4	0.57	0.65	0.63	0.54	0.76	0.70	0.356147	1.000000	-
Rv0590	mce2B	9	75.7	52.0	64.6	56.9	52.9	55.8	0.214	-0.286	0.000	-0.167	-0.264	-0.195	113.5	66.9	83.0	73.2	73.3	59.0	0.67	0.78	0.78	0.78	0.72	0.94	0.342896	1.000000	-
Rv0590A	-	7	28.0	23.2	40.2	26.6	17.2	28.4	-0.455	-0.681	0.000	-0.516	-1.030	-0.439	49.0	32.5	56.3	43.0	26.7	44.1	0.57	0.71	0.71	0.62	0.64	0.64	0.626682	1.000000	-
Rv0591	mce2C	21	121.7	123.2	117.5	105.6	102.9	113.9	0.048	0.065	0.000	-0.148	-0.183	-0.043	139.4	132.7	133.4	112.8	108.1	119.6	0.87	0.93	0.88	0.94	0.95	0.95	0.879335	1.000000	-
Rv0592	mce2D	27	84.1	65.2	85.1	84.3	77.9	78.2	-0.017	-0.361	0.000	-0.014	-0.120	-0.115	104.8	76.5	95.8	94.8	91.5	81.2	0.80	0.85	0.89	0.89	0.85	0.96	0.393202	1.000000	-
Rv0593	lprL	17	79.5	65.1	77.5	71.7	63.6	78.8	0.035	-0.234	0.000	-0.104	-0.265	0.023	112.6	96.2	109.7	89.2	80.1	103.0	0.71	0.68	0.71	0.80	0.79	0.76	0.921588	1.000000	-
Rv0594	mce2F	28	168.4	173.4	161.7	155.9	156.3	179.2	0.057	0.098	0.000	-0.051	-0.048	0.144	179.0	173.4	167.7	157.8	165.1	179.2	0.94	1.00	0.96	0.99	0.95	1.00	0.280017	1.000000	-
Rv0595c	-	6	213.6	193.0	189.1	200.6	206.2	228.1	0.171	0.029	0.000	0.083	0.121	0.264	213.6	193.0	189.1	200.6	206.2	228.1	1.00	1.00	1.00	1.00	1.00	1.00	0.983558	1.000000	-
Rv0596c	-	4	49.9	82.4	39.7	46.6	33.2	52.5	0.295	0.967	0.000	0.207	-0.228	0.362	199.4	329.5	158.8	69.9	88.4	209.9	0.25	0.25	0.25	0.67	0.38	0.25	0.014217	0.182404	-
Rv0597c	-	11	187.2	176.4	220.8	175.6	173.3	173.2	-0.232	-0.316	0.000	-0.322	-0.341	-0.341	205.9	194.0	255.6	193.2	190.6	190.5	0.91	0.91	0.86	0.91	0.91	0.91	0.999621	1.000000	-
Rv0598c	-	7	180.1	148.2	184.1	213.9	173.1	190.8	-0.030	-0.304	0.000	0.212	-0.086	0.051	180.1	159.6	214.7	213.9	173.1	190.8	1.00	0.93	0.86	1.00	1.00	1.00	0.760715	1.000000	-
Rv0599c	-	5	98.8	97.9	87.5	79.2	68.8	71.9	0.165	0.153	0.000	-0.136	-0.327	-0.267	105.8	97.9	87.5	79.2	68.8	71.9	0.93	1.00	1.00	1.00	1.00	1.00	0.874956	1.000000	-
Rv0600c	-	2	216.1	205.9	226.5	167.2	203.5	159.0	-0.066	-0.134	0.000	-0.427	-0.151	-0.497	216.1	205.9	226.5	167.2	203.5	212.0	1.00	1.00	1.00	1.00	1.00	0.75	0.892013	1.000000	-
Rv0601c	-	4	188.9	127.9	191.7	143.3	123.3	135.2	-0.021	-0.565	0.000	-0.407	-0.616	-0.489	251.8	204.6	191.7	191.1	164.5	180.2	0.75	0.62	1.00	0.75	0.75	0.75	0.777869	1.000000	-
Rv0602c	tcrA	11	261.5	250.6	287.3	280.6	229.6	227.2	-0.133	-0.194	0.000	-0.034	-0.317	-0.333	287.7	306.2	316.1	342.9	265.9	277.6	0.91	0.82	0.91	0.82	0.86	0.82	0.863222	1.000000	-
Rv0603	-	1	108.9	56.2	174.3	145.7	121.9	64.1	-0.655	-1.551	0.000	-0.251	-0.499	-1.377	108.9	56.2	174.3	145.7	121.9	64.1	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0604	lpqO	5	323.6	302.5	345.6	283.8	292.6	294.1	-0.093	-0.189	0.000	-0.280	-0.237	-0.229	404.5	302.5	384.0	283.8	365.7	326.8	0.80	1.00	0.90	1.00	0.80	0.90	0.605348	1.000000	-
Rv0605	-	8	180.6	173.3	175.3	178.5	213.8	211.6	0.042	-0.016	0.000	0.026	0.279	0.265	180.6	173.3	175.3	178.5	244.3	211.6	1.00	1.00	1.00	1.00	0.88	1.00	0.309355	1.000000	-
Rv0606	-	8	223.5	182.6	152.7	176.0	219.3	146.1	0.535	0.251	0.000	0.199	0.508	-0.062	223.5	243.5	162.9	176.0	250.7	167.0	1.00	0.75	0.94	1.00	0.88	0.88	0.048658	0.463773	-
Rv0607	-	1	311.9	275.4	364.7	263.2	194.1	145.9	-0.222	-0.399	0.000	-0.463	-0.893	-1.293	311.9	275.4	364.7	263.2	194.1	145.9	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0608	-	2	316.0	191.5	203.6	254.3	237.3	190.9	0.622	-0.086	0.000	0.314	0.216	-0.091	632.0	383.0	407.2	508.6	474.6	381.8	0.50	0.50	0.50	0.50	0.50	0.50	0.701234	1.000000	-
Rv0609	-	7	95.7	134.0	102.7	81.8	86.3	95.4	-0.098	0.368	0.000	-0.311	-0.239	-0.101	111.6	156.4	119.9	95.5	86.3	111.3	0.86	0.86	0.86	0.86	1.00	0.86	0.313068	1.000000	-
Rv0609A	-	2	163.3	153.0	227.6	192.8	174.7	130.1	-0.467	-0.558	0.000	-0.234	-0.373	-0.785	163.3	153.0	227.6	192.8	174.7	130.1	1.00	1.00	1.00	1.00	1.00	1.00	0.159961	0.978900	-
Rv0610c	-	7	206.4	308.5	272.4	184.9	242.7	189.6	-0.392	0.176	0.000	-0.547	-0.163	-0.511	228.1	359.9	272.4	184.9	242.7	204.2	0.90	0.86	1.00	1.00	1.00	0.93	0.098322	0.736323	-
Rv0611c	-	12	90.9	110.4	108.0	82.0	102.1	115.4	-0.237	0.030	0.000	-0.378	-0.078	0.091	121.2	120.4	136.4	105.4	106.5	145.7	0.75	0.92	0.79	0.78	0.96	0.79	0.516361	1.000000	-
Rv0612	-	6	236.7	192.8	237.9	242.8	215.2	216.3	-0.007	-0.296	0.000	0.029	-0.142	-0.134	250.6	192.8	259.5	242.8	215.2	216.3	0.94	1.00	0.92	1.00	1.00	1.00	0.915023	1.000000	-
Rv0613c	-	16	310.4	272.0	278.7	281.5	257.6	225.4	0.153	-0.034	0.000	0.014	-0.111	-0.300	323.9	272.0	297.2	281.5	266.0	225.4	0.96	1.00	0.94	1.00	0.97	1.00	0.701219	1.000000	-
Rv0614	-	13	142.2	163.3	140.1	139.0	156.0	168.4	0.020	0.214	0.000	-0.011	0.150	0.256	158.4	176.9	151.8	164.3	184.4	190.3	0.90	0.92	0.92	0.85	0.85	0.88	0.823966	1.000000	-
Rv0615	-	3	380.3	322.6	314.1	264.6	286.1	316.0	0.272	0.038	0.000	-0.243	-0.133	0.009	380.3	322.6	314.1	264.6	286.1	316.0	1.00	1.00	1.00	1.00	1.00	1.00	0.968340	1.000000	-
Rv0616c	-	5	126.8	142.0	154.1	152.0	93.8	127.3	-0.272	-0.114	0.000	-0.020	-0.687	-0.266	126.8	142.0	154.1	162.8	117.3	159.1	1.00	1.00	1.00	0.93	0.80	0.80	0.305239	1.000000	-
Rv0617	-	2	330.3	328.9	291.1	300.7	237.3	243.7	0.180	0.174	0.000	0.046	-0.289	-0.251	330.3	328.9	291.1	300.7	237.3	243.7	1.00	1.00	1.00	1.00	1.00	1.00	0.993213	1.000000	-
Rv0618	galTa	6	105.8	70.4	100.1	63.6	69.6	66.3	0.077	-0.478	0.000	-0.614	-0.494	-0.559	127.0	70.4	120.1	71.6	75.9	99.5	0.83	1.00	0.83	0.89	0.92	0.67	0.191663	1.000000	-
Rv0619	galTb	12	105.4	80.9	99.8	66.5	66.9	62.6	0.076	-0.287	0.000	-0.551	-0.543	-0.632	122.4	80.9	104.1	92.1	80.3	83.5	0.86	1.00	0.96	0.72	0.83	0.75	0.013807	0.178680	-
Rv0620	galK	7	123.0	98.6	142.0	131.2	102.2	108.8	-0.200	-0.505	0.000	-0.110	-0.455	-0.368	135.9	125.5	198.8	131.2	119.2	127.0	0.90	0.79	0.71	1.00	0.86	0.86	0.239733	1.000000	-
Rv0621	-	9	177.1	160.1	127.1	131.6	118.7	134.1	0.463	0.322	0.000	0.048	-0.095	0.074	199.2	192.2	152.5	148.0	133.5	150.9	0.89	0.83	0.83	0.89	0.89	0.89	0.986262	1.000000	-
Rv0622	-	10	37.7	34.7	52.5	45.2	41.0	45.7	-0.429	-0.534	0.000	-0.197	-0.324	-0.182	94.4	63.1	116.7	104.3	74.5	91.4	0.40	0.55	0.45	0.43	0.55	0.50	0.965310	1.000000	-
Rv0623	-	2	112.5	48.7	49.9	79.6	93.4	122.0	1.099	-0.031	0.000	0.625	0.843	1.210	112.5	97.4	66.5	79.6	93.4	122.0	1.00	0.50	0.75	1.00	1.00	1.00	0.300353	1.000000	-
Rv0624	-	6	169.1	176.9	173.7	173.7	187.6	193.7	-0.037	0.026	0.000	0.000	0.109	0.153	203.0	176.9	173.7	173.7	187.6	193.7	0.83	1.00	1.00	1.00	1.00	1.00	0.464811	1.000000	-
Rv0625c	-	10	297.7	251.5	285.4	308.8	248.5	215.8	0.059	-0.179	0.000	0.112	-0.197	-0.396	297.7	279.5	300.5	319.5	248.5	215.8	1.00	0.90	0.95	0.97	1.00	1.00	0.586175	1.000000	-
Rv0626	-	4	138.8	129.6	155.0	116.6	125.8	144.4	-0.154	-0.249	0.000	-0.396	-0.290	-0.099	138.8	129.6	177.1	116.6	125.8	144.4	1.00	1.00	0.88	1.00	1.00	1.00	0.823354	1.000000	-
Rv0627	-	1	7.5	30.4	47.0	23.4	58.7	30.4	-2.054	-0.556	0.000	-0.874	0.291	-0.558	22.6	30.4	47.0	35.1	58.7	30.4	0.33	1.00	1.00	0.67	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0628c	-	3	354.9	292.8	312.1	298.6	246.3	277.6	0.183	-0.091	0.000	-0.063	-0.336	-0.166	532.4	439.2	374.6	448.0	369.4	333.1	0.67	0.67	0.83	0.67	0.67	0.83	0.993827	1.000000	-
Rv0629c	recD	15	74.7	85.1	64.4	68.3	75.4	62.3	0.201	0.378	0.000	0.079	0.213	-0.045	98.9	91.2	77.3	85.4	113.2	81.2	0.76	0.93	0.83	0.80	0.67	0.77	0.297889	1.000000	-
Rv0630c	recB	31	152.1	121.0	155.4	136.1	132.7	119.7	-0.030	-0.348	0.000	-0.185	-0.220	-0.363	172.5	134.0	192.7	158.2	146.9	140.0	0.88	0.90	0.81	0.86	0.90	0.85	0.803415	1.000000	-
Rv0631c	recC	17	176.4	141.1	171.7	168.0	143.0	143.2	0.038	-0.275	0.000	-0.031	-0.256	-0.254	204.5	177.6	233.6	209.0	173.6	173.9	0.86	0.79	0.74	0.80	0.82	0.82	0.959469	1.000000	-
Rv0632c	echA3	10	92.1	75.8	82.9	97.5	95.6	115.0	0.144	-0.120	0.000	0.222	0.195	0.449	106.3	79.8	87.2	97.5	95.6	127.7	0.87	0.95	0.95	1.00	1.00	0.90	0.253650	1.000000	-
Rv0633c	-	12	250.0	270.0	265.0	279.6	271.3	266.6	-0.083	0.027	0.000	0.076	0.033	0.009	257.1	270.0	276.5	279.6	271.3	266.6	0.97	1.00	0.96	1.00	1.00	1.00	0.972332	1.000000	-
Rv0634c	-	12	63.8	77.2	86.8	58.1	74.4	90.7	-0.415	-0.158	0.000	-0.540	-0.208	0.061	74.1	77.2	104.1	63.4	74.4	94.7	0.86	1.00	0.83	0.92	1.00	0.96	0.123138	0.835577	-
Rv0634A	-	6	84.8	93.4	99.2	105.0	99.4	94.0	-0.215	-0.083	0.000	0.077	0.002	-0.075	127.2	93.4	119.1	125.9	119.3	94.0	0.67	1.00	0.83	0.83	0.83	1.00	0.316474	1.000000	-
Rv0634B	rpmG	3	0.0	0.0	0.0	4.9	4.8	0.0	0.000	0.000	0.000	0.984	0.973	0.000	0.0	0.0	0.0	14.7	28.9	0.0	0.00	0.00	0.00	0.33	0.17	0.00	0.186943	1.000000	-
Rv0635	-	14	0.0	0.4	0.0	0.0	0.0	0.0	0.000	0.100	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.04	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0636	-	6	0.0	0.0	0.0	0.0	0.8	0.0	0.000	0.000	0.000	0.000	0.202	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.08	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0637	-	6	13.4	29.8	11.5	15.7	32.5	24.3	0.162	1.080	0.000	0.329	1.186	0.831	26.8	44.7	34.4	31.4	48.7	32.4	0.50	0.67	0.33	0.50	0.67	0.75	0.304524	1.000000	-
Rv0638	secE	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0639	nusG	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0640	rplK	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0641	rplA	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0642c	mmaA4	16	6.6	31.9	16.5	43.9	51.8	19.8	-0.897	0.780	0.000	1.184	1.400	0.203	31.5	37.9	35.2	49.0	57.1	23.4	0.21	0.84	0.47	0.90	0.91	0.84	0.000000	0.000000	-
Rv0643c	mmaA3	20	152.7	232.7	152.3	244.9	247.9	203.2	0.003	0.596	0.000	0.668	0.685	0.405	163.6	245.0	169.2	244.9	247.9	208.4	0.93	0.95	0.90	1.00	1.00	0.97	0.009546	0.134111	-
Rv0644c	mmaA2	9	314.5	335.2	378.0	421.4	457.5	328.5	-0.262	-0.171	0.000	0.155	0.272	-0.199	314.5	335.2	378.0	474.0	457.5	369.6	1.00	1.00	1.00	0.89	1.00	0.89	0.074535	0.623469	-
Rv0645c	mmaA1	16	354.6	337.4	332.6	345.0	338.9	370.2	0.091	0.020	0.000	0.052	0.027	0.152	354.6	337.4	343.3	345.0	338.9	370.2	1.00	1.00	0.97	1.00	1.00	1.00	0.918219	1.000000	-
Rv0646c	lipG	9	354.0	267.0	247.6	243.5	264.6	232.8	0.507	0.107	0.000	-0.024	0.094	-0.087	354.0	267.0	247.6	243.5	280.2	232.8	1.00	1.00	1.00	1.00	0.94	1.00	0.424558	1.000000	-
Rv0647c	-	11	0.0	0.0	0.0	0.4	1.5	0.0	0.000	0.000	0.000	0.124	0.373	0.000	0.0	0.0	0.0	14.8	16.3	0.0	0.00	0.00	0.00	0.03	0.09	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0648	-	35	280.1	269.4	292.5	275.6	279.9	250.5	-0.061	-0.116	0.000	-0.084	-0.063	-0.220	306.4	290.1	315.0	301.4	288.1	254.1	0.91	0.93	0.93	0.91	0.97	0.99	0.724736	1.000000	-
Rv0649	fabD2	4	505.1	396.4	570.9	442.7	395.6	321.5	-0.175	-0.521	0.000	-0.363	-0.523	-0.818	505.1	396.4	570.9	442.7	452.2	321.5	1.00	1.00	1.00	1.00	0.88	1.00	0.871257	1.000000	-
Rv0650	-	5	189.8	174.0	184.0	237.1	237.2	177.5	0.044	-0.078	0.000	0.357	0.358	-0.050	237.3	217.5	230.0	237.1	296.5	221.9	0.80	0.80	0.80	1.00	0.80	0.80	0.566310	1.000000	-
Rv0651	rplJ	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0652	rplL	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0653c	-	10	208.8	226.9	234.4	245.2	225.5	230.0	-0.163	-0.046	0.000	0.064	-0.054	-0.026	240.9	252.1	246.7	272.4	250.6	230.0	0.87	0.90	0.95	0.90	0.90	1.00	0.873582	1.000000	-
Rv0654	-	25	338.2	319.3	320.0	308.0	294.5	276.3	0.079	-0.003	0.000	-0.054	-0.118	-0.208	378.6	332.6	372.1	355.4	313.3	300.3	0.89	0.96	0.86	0.87	0.94	0.92	0.899014	1.000000	-
Rv0655	mkl	11	45.6	73.7	28.5	93.1	111.9	63.4	0.595	1.232	0.000	1.550	1.803	1.031	79.1	101.3	44.7	118.1	136.7	82.1	0.58	0.73	0.64	0.79	0.82	0.77	0.049051	0.463773	-
Rv0656c	-	4	176.6	194.6	194.7	177.4	220.3	201.1	-0.137	-0.001	0.000	-0.131	0.174	0.046	176.6	194.6	194.7	177.4	220.3	201.1	1.00	1.00	1.00	1.00	1.00	1.00	0.921941	1.000000	-
Rv0657c	-	1	179.8	179.7	131.3	259.9	163.2	217.2	0.439	0.438	0.000	0.959	0.303	0.705	179.8	179.7	131.3	259.9	163.2	217.2	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0658c	-	14	144.7	187.0	153.9	172.5	149.8	159.4	-0.087	0.273	0.000	0.159	-0.038	0.049	155.8	187.0	159.6	176.7	155.3	202.8	0.93	1.00	0.96	0.98	0.96	0.79	0.055456	0.505180	-
Rv0659c	-	4	290.2	317.9	317.3	321.3	297.1	373.7	-0.126	0.003	0.000	0.018	-0.093	0.233	316.6	317.9	423.0	350.5	297.1	373.7	0.92	1.00	0.75	0.92	1.00	1.00	0.846674	1.000000	-
Rv0660c	-	2	680.1	572.7	533.9	600.2	405.8	428.0	0.346	0.100	0.000	0.168	-0.391	-0.315	680.1	572.7	533.9	600.2	405.8	428.0	1.00	1.00	1.00	1.00	1.00	1.00	0.007546	0.110694	-
Rv0661c	-	4	271.9	201.8	222.7	266.0	214.1	198.3	0.282	-0.139	0.000	0.251	-0.056	-0.163	271.9	201.8	222.7	266.0	214.1	198.3	1.00	1.00	1.00	1.00	1.00	1.00	0.222509	1.000000	-
Rv0662c	-	4	167.1	170.7	226.9	156.8	160.8	152.3	-0.430	-0.400	0.000	-0.520	-0.484	-0.560	167.1	170.7	226.9	156.8	160.8	152.3	1.00	1.00	1.00	1.00	1.00	1.00	0.953552	1.000000	-
Rv0663	atsD	43	107.5	96.2	112.2	108.0	108.4	89.0	-0.059	-0.212	0.000	-0.053	-0.048	-0.318	130.8	108.9	132.2	130.2	133.2	96.9	0.82	0.88	0.85	0.83	0.81	0.92	0.335578	1.000000	-
Rv0664	-	3	260.1	137.2	254.3	242.6	218.3	174.5	0.032	-0.867	0.000	-0.066	-0.215	-0.530	292.6	205.7	254.3	311.9	218.3	261.8	0.89	0.67	1.00	0.78	1.00	0.67	0.551442	1.000000	-
Rv0665	-	5	190.2	149.0	134.3	169.7	176.6	165.6	0.487	0.144	0.000	0.327	0.383	0.293	237.8	165.5	167.9	195.8	220.8	207.0	0.80	0.90	0.80	0.87	0.80	0.80	0.973608	1.000000	-
Rv0666	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0667	rpoB	32	0.0	0.3	0.0	0.0	0.0	0.0	0.000	0.089	0.000	0.000	0.000	0.000	0.0	10.2	0.0	0.0	0.0	0.0	0.00	0.03	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0668	rpoC	35	0.0	0.0	0.2	0.0	0.0	0.0	-0.051	-0.051	0.000	-0.051	-0.051	-0.051	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.01	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0669c	-	32	180.0	182.3	195.5	190.2	167.3	181.6	-0.116	-0.099	0.000	-0.039	-0.219	-0.104	194.2	191.3	231.8	196.3	178.5	193.7	0.93	0.95	0.84	0.97	0.94	0.94	0.508468	1.000000	-
Rv0670	end	5	335.8	239.3	255.8	262.6	325.2	232.7	0.386	-0.094	0.000	0.037	0.340	-0.134	335.8	239.3	255.8	262.6	325.2	232.7	1.00	1.00	1.00	1.00	1.00	1.00	0.626092	1.000000	-
Rv0671	lpqP	12	164.8	158.5	171.9	163.0	166.9	156.9	-0.059	-0.114	0.000	-0.074	-0.041	-0.128	179.8	158.5	171.9	177.8	166.9	171.1	0.92	1.00	1.00	0.92	1.00	0.92	0.488858	1.000000	-
Rv0672	fadE8	23	134.7	146.9	158.7	155.7	167.0	134.1	-0.228	-0.108	0.000	-0.026	0.072	-0.235	145.2	173.2	173.8	179.1	174.6	150.4	0.93	0.85	0.91	0.87	0.96	0.89	0.591768	1.000000	-
Rv0673	echA4	8	111.5	117.2	126.9	99.1	100.9	103.0	-0.179	-0.110	0.000	-0.342	-0.317	-0.288	111.5	133.9	145.0	113.2	115.3	117.8	1.00	0.88	0.88	0.88	0.88	0.88	0.526029	1.000000	-
Rv0674	-	6	20.9	15.4	41.2	11.4	20.9	24.2	-0.837	-1.179	0.000	-1.492	-0.835	-0.664	41.7	46.2	61.8	41.1	41.8	36.3	0.50	0.33	0.67	0.28	0.50	0.67	0.372689	1.000000	-
Rv0675	echA5	4	32.4	27.1	42.1	42.0	65.9	32.8	-0.333	-0.555	0.000	-0.004	0.588	-0.321	43.3	43.3	56.2	45.8	75.3	32.8	0.75	0.62	0.75	0.92	0.88	1.00	0.150674	0.944164	-
Rv0676c	mmpL5	31	0.3	1.5	38.8	102.0	112.0	0.5	-3.047	-2.761	0.000	1.289	1.418	-2.993	14.0	12.9	68.7	130.0	138.9	10.3	0.02	0.11	0.56	0.78	0.81	0.05	0.000000	0.000000	-
Rv0677c	mmpS5	5	1.5	3.0	54.5	131.7	138.6	0.0	-3.193	-2.897	0.000	1.200	1.271	-3.573	22.6	15.0	68.1	164.6	154.0	0.0	0.07	0.20	0.80	0.80	0.90	0.00	0.000000	0.000000	-
Rv0678	-	5	259.0	255.7	223.4	190.2	193.8	338.0	0.209	0.191	0.000	-0.227	-0.200	0.587	259.0	255.7	223.4	190.2	193.8	338.0	1.00	1.00	1.00	1.00	1.00	1.00	0.606170	1.000000	-
Rv0679c	-	6	165.7	181.8	175.0	223.2	221.6	183.2	-0.077	0.053	0.000	0.342	0.332	0.064	175.5	181.8	175.0	223.2	221.6	183.2	0.94	1.00	1.00	1.00	1.00	1.00	0.951538	1.000000	-
Rv0680c	-	3	180.0	304.7	237.6	291.5	362.8	323.6	-0.391	0.352	0.000	0.289	0.600	0.438	180.0	304.7	237.6	291.5	362.8	323.6	1.00	1.00	1.00	1.00	1.00	1.00	0.090739	0.701644	-
Rv0681	-	11	248.1	214.4	247.2	193.6	172.2	176.0	0.005	-0.201	0.000	-0.344	-0.509	-0.479	272.9	235.8	247.2	213.0	172.2	176.0	0.91	0.91	1.00	0.91	1.00	1.00	0.202541	1.000000	-
Rv0682	rpsL	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0683	rpsG	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0684	fusA1	29	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0685	tuf	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0686	-	8	241.0	244.3	225.8	253.5	244.9	243.5	0.092	0.111	0.000	0.164	0.115	0.107	241.0	244.3	225.8	253.5	244.9	243.5	1.00	1.00	1.00	1.00	1.00	1.00	0.997971	1.000000	-
Rv0687	fabG	15	88.3	98.3	88.9	82.0	83.5	86.4	-0.009	0.138	0.000	-0.110	-0.085	-0.039	110.4	134.1	111.1	105.4	92.8	108.0	0.80	0.73	0.80	0.78	0.90	0.80	0.914286	1.000000	-
Rv0688	-	17	91.6	84.2	77.6	74.3	87.3	88.7	0.226	0.110	0.000	-0.059	0.160	0.181	116.8	98.7	85.1	92.4	95.8	97.2	0.78	0.85	0.91	0.80	0.91	0.91	0.698202	1.000000	-
Rv0689c	-	3	358.1	310.8	276.0	320.9	276.9	211.6	0.370	0.168	0.000	0.214	0.005	-0.376	460.4	310.8	414.0	412.6	276.9	317.4	0.78	1.00	0.67	0.78	1.00	0.67	0.781572	1.000000	-
Rv0690c	-	17	90.0	88.1	112.2	98.6	112.3	99.2	-0.303	-0.331	0.000	-0.178	0.002	-0.169	117.7	107.0	141.2	128.9	123.2	112.5	0.76	0.82	0.79	0.76	0.91	0.88	0.902162	1.000000	-
Rv0691c	-	9	113.4	130.7	140.9	113.7	122.4	118.6	-0.301	-0.104	0.000	-0.297	-0.195	-0.239	117.8	138.4	158.5	113.7	122.4	118.6	0.96	0.94	0.89	1.00	1.00	1.00	0.376636	1.000000	-
Rv0692	-	6	217.6	196.9	173.4	265.5	213.3	258.3	0.320	0.178	0.000	0.601	0.291	0.562	261.1	236.2	189.1	318.6	256.0	310.0	0.83	0.83	0.92	0.83	0.83	0.83	0.902020	1.000000	-
Rv0693	pqqE	17	67.7	52.1	73.7	83.0	82.3	74.9	-0.115	-0.464	0.000	0.162	0.149	0.022	88.5	70.8	89.5	103.3	99.9	87.9	0.76	0.74	0.82	0.80	0.82	0.85	0.778830	1.000000	-
Rv0694	lldD1	16	54.4	70.7	77.9	68.6	67.2	85.9	-0.480	-0.131	0.000	-0.172	-0.198	0.133	87.1	102.8	108.4	99.7	93.5	110.0	0.62	0.69	0.72	0.69	0.72	0.78	0.966896	1.000000	-
Rv0695	-	10	75.8	65.3	68.7	68.7	68.5	62.4	0.132	-0.068	0.000	0.001	-0.004	-0.129	103.3	81.6	91.6	79.3	105.4	83.2	0.73	0.80	0.75	0.87	0.65	0.75	0.885750	1.000000	-
Rv0696	-	23	127.9	104.6	155.5	122.8	119.4	99.9	-0.272	-0.550	0.000	-0.328	-0.367	-0.613	154.9	120.3	170.3	143.7	127.8	109.4	0.83	0.87	0.91	0.86	0.93	0.91	0.607179	1.000000	-
Rv0697	-	25	24.0	23.1	29.0	22.6	16.8	18.9	-0.231	-0.278	0.000	-0.304	-0.644	-0.510	50.0	64.0	58.0	44.5	52.4	36.3	0.48	0.36	0.50	0.51	0.32	0.52	0.045173	0.443940	-
Rv0698	-	10	46.4	36.4	54.9	44.6	41.4	35.5	-0.219	-0.533	0.000	-0.270	-0.368	-0.563	58.0	52.0	64.6	60.9	59.1	54.7	0.80	0.70	0.85	0.73	0.70	0.65	0.861678	1.000000	-
Rv0699	-	2	3.8	10.4	9.5	13.8	13.1	2.4	-0.723	0.092	0.000	0.377	0.322	-0.978	22.6	20.8	37.9	27.6	26.2	9.4	0.17	0.50	0.25	0.50	0.50	0.25	0.791574	1.000000	-
Rv0700	rpsJ	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0701	rplC	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0702	rplD	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0703	rplW	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0704	rplB	16	0.0	1.3	0.0	0.6	0.3	0.3	0.000	0.324	0.000	0.166	0.079	0.094	0.0	20.1	0.0	14.6	9.0	10.8	0.00	0.06	0.00	0.04	0.03	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0705	rpsS	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0706	rplV	4	1.0	0.0	1.6	0.0	0.0	0.0	-0.140	-0.395	0.000	-0.395	-0.395	-0.395	11.6	0.0	12.6	0.0	0.0	0.0	0.08	0.00	0.12	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0707	rpsC	14	0.0	0.0	0.4	0.0	0.0	0.0	-0.124	-0.124	0.000	-0.124	-0.124	-0.124	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.04	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0708	rplP	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0709	rpmC	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0710	rpsQ	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0711	atsA	42	121.7	109.8	120.5	113.8	110.6	98.4	0.013	-0.128	0.000	-0.079	-0.118	-0.280	148.8	121.4	148.9	132.8	127.3	105.9	0.82	0.90	0.81	0.86	0.87	0.93	0.536550	1.000000	-
Rv0712	-	18	82.8	59.8	85.6	67.7	68.0	58.9	-0.045	-0.482	0.000	-0.318	-0.311	-0.504	111.7	86.2	123.2	98.8	84.4	73.1	0.74	0.69	0.69	0.69	0.81	0.81	0.750000	1.000000	-
Rv0713	-	16	171.9	178.8	185.1	193.1	176.6	188.7	-0.104	-0.049	0.000	0.059	-0.067	0.027	206.3	211.9	219.4	215.6	201.8	208.2	0.83	0.84	0.84	0.90	0.88	0.91	0.999517	1.000000	-
Rv0714	rplN	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0715	rplX	5	0.0	1.0	0.0	1.0	0.0	0.0	0.000	0.263	0.000	0.260	0.000	0.000	0.0	10.0	0.0	14.8	0.0	0.0	0.00	0.10	0.00	0.07	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0716	rplE	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0717	rpsN	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0718	rpsH	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0719	rplF	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0720	rplR	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0721	rpsE	9	5.4	4.5	1.4	6.6	5.6	7.1	0.700	0.575	0.000	0.855	0.729	0.921	48.6	40.8	25.2	59.2	50.5	64.1	0.11	0.11	0.06	0.11	0.11	0.11	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0722	rpmD	1	33.8	55.7	6.3	65.8	60.5	29.7	1.779	2.427	0.000	2.647	2.534	1.619	33.8	55.7	12.6	65.8	60.5	29.7	1.00	1.00	0.50	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0723	rplO	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0724	sppA	28	94.4	88.6	80.8	89.4	98.4	92.8	0.211	0.124	0.000	0.137	0.268	0.189	107.2	93.6	94.3	98.8	108.0	102.0	0.88	0.95	0.86	0.90	0.91	0.91	0.957806	1.000000	-
Rv0724A	-	5	103.9	81.9	147.8	124.0	135.2	127.2	-0.489	-0.815	0.000	-0.245	-0.125	-0.209	141.7	102.3	164.2	155.0	169.0	159.1	0.73	0.80	0.90	0.80	0.80	0.80	0.992325	1.000000	-
Rv0725c	-	14	114.2	105.2	114.4	98.8	114.8	111.3	-0.003	-0.116	0.000	-0.203	0.005	-0.038	141.0	122.7	139.3	129.7	146.2	119.9	0.81	0.86	0.82	0.76	0.79	0.93	0.920990	1.000000	-
Rv0726c	-	14	122.5	102.7	119.2	105.7	102.5	116.1	0.037	-0.207	0.000	-0.166	-0.209	-0.037	131.9	115.0	139.1	120.0	102.5	135.4	0.93	0.89	0.86	0.88	1.00	0.86	0.538279	1.000000	-
Rv0727c	fucA	10	314.4	221.2	220.3	210.9	176.8	240.2	0.504	0.006	0.000	-0.062	-0.309	0.122	314.4	221.2	220.3	210.9	176.8	240.2	1.00	1.00	1.00	1.00	1.00	1.00	0.183598	1.000000	-
Rv0728c	serA2	8	134.3	120.0	123.6	118.0	111.0	153.4	0.115	-0.041	0.000	-0.064	-0.148	0.300	161.2	137.1	164.8	134.9	126.9	175.3	0.83	0.88	0.75	0.88	0.88	0.88	0.996946	1.000000	-
Rv0729	xylB	17	291.3	260.6	248.1	269.6	269.7	260.5	0.228	0.069	0.000	0.118	0.118	0.069	345.5	295.3	281.2	305.5	295.8	285.7	0.84	0.88	0.88	0.88	0.91	0.91	0.999285	1.000000	-
Rv0730	-	1	58.4	35.3	21.8	60.6	47.0	39.8	1.242	0.590	0.000	1.292	0.955	0.741	58.4	35.3	21.8	60.6	47.0	39.8	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0731c	-	9	293.9	348.7	285.8	277.4	301.9	280.8	0.040	0.283	0.000	-0.042	0.078	-0.025	330.6	392.3	321.5	277.4	301.9	336.9	0.89	0.89	0.89	1.00	1.00	0.83	0.327934	1.000000	-
Rv0732	secY	26	0.1	0.0	0.0	0.0	0.0	0.0	0.042	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.01	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0733	adk	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0734	mapA	8	110.6	166.3	143.7	156.2	153.7	168.4	-0.363	0.204	0.000	0.116	0.094	0.221	132.7	177.4	176.9	197.3	189.2	192.4	0.83	0.94	0.81	0.79	0.81	0.88	0.894598	1.000000	-
Rv0735	sigL	6	311.2	265.1	293.4	354.9	313.6	296.0	0.083	-0.144	0.000	0.270	0.094	0.012	311.2	265.1	293.4	354.9	313.6	296.0	1.00	1.00	1.00	1.00	1.00	1.00	0.919460	1.000000	-
Rv0736	-	6	31.9	41.6	27.0	51.7	98.5	19.5	0.203	0.539	0.000	0.824	1.691	-0.389	52.2	49.9	40.6	51.7	118.2	29.2	0.61	0.83	0.67	1.00	0.83	0.67	0.000155	0.003823	-
Rv0737	-	4	136.7	126.0	146.1	137.9	158.7	176.7	-0.093	-0.205	0.000	-0.080	0.116	0.266	149.1	126.0	167.0	150.4	158.7	176.7	0.92	1.00	0.88	0.92	1.00	1.00	0.947924	1.000000	-
Rv0738	-	1	143.7	138.0	81.4	64.8	185.1	113.6	0.783	0.726	0.000	-0.309	1.136	0.456	143.7	138.0	81.4	64.8	185.1	113.6	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0739	-	17	203.5	258.8	233.6	226.2	241.7	259.0	-0.194	0.145	0.000	-0.045	0.048	0.146	225.7	266.7	240.7	256.4	241.7	293.6	0.90	0.97	0.97	0.88	1.00	0.88	0.268258	1.000000	-
Rv0740	-	10	79.6	65.8	94.7	68.5	67.1	78.2	-0.238	-0.494	0.000	-0.441	-0.468	-0.261	119.3	82.3	118.4	97.8	79.0	82.3	0.67	0.80	0.80	0.70	0.85	0.95	0.541237	1.000000	-
Rv0741	-	3	56.0	33.8	43.8	39.1	43.0	49.5	0.322	-0.332	0.000	-0.146	-0.022	0.159	63.0	33.8	52.5	58.6	43.0	49.5	0.89	1.00	0.83	0.67	1.00	1.00	0.382788	1.000000	-
Rv0742	PE_PGRS8	5	367.9	333.5	296.9	282.7	326.4	281.2	0.304	0.165	0.000	-0.070	0.134	-0.077	459.8	333.5	296.9	282.7	326.4	281.2	0.80	1.00	1.00	1.00	1.00	1.00	0.332910	1.000000	-
Rv0743c	-	7	310.2	274.4	252.5	276.3	282.3	322.7	0.292	0.118	0.000	0.127	0.158	0.348	310.2	274.4	252.5	276.3	282.3	322.7	1.00	1.00	1.00	1.00	1.00	1.00	0.973893	1.000000	-
Rv0744c	-	9	20.9	28.8	26.4	25.5	28.9	37.6	-0.279	0.108	0.000	-0.043	0.110	0.440	35.2	32.4	47.5	36.2	40.0	42.3	0.59	0.89	0.56	0.70	0.72	0.89	0.334716	1.000000	-
Rv0745	-	7	324.5	300.3	309.7	325.9	335.2	340.2	0.066	-0.044	0.000	0.072	0.113	0.133	378.6	350.3	309.7	380.2	335.2	396.9	0.86	0.86	1.00	0.86	1.00	0.86	0.607200	1.000000	-
Rv0746	PE_PGRS9	14	74.0	73.5	61.0	67.5	74.7	59.6	0.259	0.251	0.000	0.135	0.273	-0.030	103.6	103.0	85.4	88.6	110.1	83.5	0.71	0.71	0.71	0.76	0.68	0.71	0.964639	1.000000	-
Rv0747	PE_PGRS10	12	195.8	192.3	183.9	189.6	178.8	154.5	0.088	0.062	0.000	0.043	-0.039	-0.244	220.3	230.7	200.7	213.3	195.1	185.4	0.89	0.83	0.92	0.89	0.92	0.83	0.981083	1.000000	-
Rv0748	-	2	320.8	419.1	377.0	333.0	344.1	391.4	-0.230	0.151	0.000	-0.177	-0.130	0.053	320.8	419.1	377.0	333.0	344.1	391.4	1.00	1.00	1.00	1.00	1.00	1.00	0.981287	1.000000	-
Rv0749	-	4	200.3	144.2	139.1	166.7	128.8	147.8	0.511	0.051	0.000	0.253	-0.107	0.085	200.3	144.2	139.1	166.7	128.8	147.8	1.00	1.00	1.00	1.00	1.00	1.00	0.937451	1.000000	-
Rv0749A	-	1	88.3	81.8	34.4	56.9	85.7	85.8	1.242	1.139	0.000	0.649	1.201	1.202	88.3	81.8	34.4	56.9	85.7	85.8	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0750	-	4	190.5	136.0	119.7	128.7	126.3	136.0	0.648	0.177	0.000	0.101	0.074	0.177	190.5	136.0	119.7	128.7	126.3	155.4	1.00	1.00	1.00	1.00	1.00	0.88	0.783720	1.000000	-
Rv0751c	mmsB	6	144.0	159.3	134.9	166.9	186.4	143.4	0.092	0.232	0.000	0.298	0.452	0.086	144.0	173.8	134.9	176.7	186.4	143.4	1.00	0.92	1.00	0.94	1.00	1.00	0.660985	1.000000	-
Rv0752c	fadE9	14	120.4	128.9	140.8	134.7	139.5	130.7	-0.217	-0.123	0.000	-0.062	-0.013	-0.104	153.3	164.1	164.3	161.6	162.7	152.5	0.79	0.79	0.86	0.83	0.86	0.86	0.994115	1.000000	-
Rv0753c	mmsA	18	175.8	191.1	148.4	162.4	161.7	159.1	0.237	0.354	0.000	0.126	0.120	0.097	186.2	202.3	178.1	175.4	166.4	168.4	0.94	0.94	0.83	0.93	0.97	0.94	0.857765	1.000000	-
Rv0754	PE_PGRS11	27	189.0	180.3	178.2	180.3	162.4	166.0	0.083	0.017	0.000	0.017	-0.130	-0.099	212.7	190.9	196.3	189.7	182.7	186.8	0.89	0.94	0.91	0.95	0.89	0.89	0.942164	1.000000	-
Rv0755c	PPE12	51	18.3	18.0	14.9	16.6	17.8	19.3	0.226	0.203	0.000	0.118	0.194	0.286	103.8	65.4	101.6	98.0	67.3	73.0	0.18	0.27	0.15	0.17	0.26	0.26	0.500014	1.000000	-
Rv0755A	-	5	55.8	67.0	53.7	56.9	73.5	89.0	0.051	0.296	0.000	0.076	0.420	0.680	93.0	95.8	76.7	94.8	105.0	127.2	0.60	0.70	0.70	0.60	0.70	0.70	0.936507	1.000000	-
Rv0756c	-	6	750.0	629.2	843.8	734.4	681.4	600.3	-0.169	-0.420	0.000	-0.199	-0.306	-0.488	750.0	629.2	843.8	734.4	681.4	600.3	1.00	1.00	1.00	1.00	1.00	1.00	0.587384	1.000000	-
Rv0757	phoP	10	3.0	5.6	0.6	1.4	1.9	7.3	0.500	0.907	0.000	0.189	0.293	1.123	17.8	11.1	12.6	14.2	12.7	16.1	0.17	0.50	0.05	0.10	0.15	0.45	0.002489	0.044135	-
Rv0758	phoR	16	4.3	11.1	2.5	5.6	3.3	7.2	0.299	1.096	0.000	0.484	0.142	0.688	20.6	22.3	27.2	22.2	13.3	17.6	0.21	0.50	0.09	0.25	0.25	0.41	0.014610	0.185647	-
Rv0759c	-	2	218.5	242.0	227.1	200.2	245.5	204.1	-0.054	0.090	0.000	-0.178	0.110	-0.151	218.5	242.0	227.1	200.2	245.5	204.1	1.00	1.00	1.00	1.00	1.00	1.00	0.932844	1.000000	-
Rv0760c	-	5	33.1	31.8	32.6	33.4	42.4	57.3	0.021	-0.031	0.000	0.030	0.335	0.729	71.0	39.7	65.2	41.7	53.0	63.7	0.47	0.80	0.50	0.80	0.80	0.90	0.440009	1.000000	-
Rv0761c	adhB	12	76.7	69.2	78.0	118.4	99.3	78.0	-0.023	-0.161	0.000	0.572	0.330	0.000	98.6	75.5	124.8	137.5	113.5	93.6	0.78	0.92	0.62	0.86	0.88	0.83	0.358593	1.000000	-
Rv0762c	-	12	200.6	203.7	177.0	196.6	177.6	229.9	0.176	0.198	0.000	0.147	0.005	0.368	218.9	212.6	184.7	202.2	177.6	229.9	0.92	0.96	0.96	0.97	1.00	1.00	0.769509	1.000000	-
Rv0763c	-	1	22.3	56.2	47.0	51.1	39.7	60.1	-0.929	0.234	0.000	0.109	-0.220	0.322	22.3	56.2	47.0	51.1	39.7	60.1	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0764c	cyp51	16	66.7	63.5	66.4	49.9	60.2	60.2	0.006	-0.061	0.000	-0.381	-0.133	-0.132	103.3	78.1	85.0	64.7	77.0	74.1	0.65	0.81	0.78	0.77	0.78	0.81	0.697268	1.000000	-
Rv0765c	-	9	68.7	64.6	90.2	76.3	85.5	85.1	-0.371	-0.453	0.000	-0.228	-0.073	-0.081	103.0	89.4	95.5	85.8	128.3	109.4	0.67	0.72	0.94	0.89	0.67	0.78	0.206012	1.000000	-
Rv0766c	cyp123	23	32.6	28.5	39.6	30.4	38.9	30.5	-0.246	-0.410	0.000	-0.333	-0.022	-0.327	70.2	57.1	70.0	72.3	61.7	54.0	0.46	0.50	0.57	0.42	0.63	0.57	0.745057	1.000000	-
Rv0767c	-	11	250.8	238.9	216.2	222.3	216.0	199.5	0.209	0.141	0.000	0.039	-0.001	-0.113	275.9	238.9	237.9	244.6	237.6	219.5	0.91	1.00	0.91	0.91	0.91	0.91	0.948079	1.000000	-
Rv0768	aldA	21	94.7	100.2	106.3	98.4	87.5	86.9	-0.159	-0.082	0.000	-0.107	-0.267	-0.277	112.6	127.5	124.1	106.9	118.6	110.6	0.84	0.79	0.86	0.92	0.74	0.79	0.300078	1.000000	-
Rv0769	-	16	96.9	89.2	80.2	80.9	78.3	96.9	0.258	0.145	0.000	0.012	-0.033	0.258	116.3	102.0	102.6	92.5	83.5	110.7	0.83	0.88	0.78	0.88	0.94	0.88	0.850742	1.000000	-
Rv0770	-	7	203.9	180.5	220.8	185.0	152.2	146.3	-0.112	-0.284	0.000	-0.249	-0.522	-0.577	203.9	180.5	237.8	185.0	152.2	146.3	1.00	1.00	0.93	1.00	1.00	1.00	0.843573	1.000000	-
Rv0771	-	8	27.9	30.5	29.2	26.8	36.8	46.1	-0.058	0.054	0.000	-0.105	0.287	0.577	47.8	54.3	46.8	46.0	45.3	56.7	0.58	0.56	0.62	0.58	0.81	0.81	0.834030	1.000000	-
Rv0772	purD	20	0.2	0.0	0.0	0.0	0.0	0.0	0.055	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.02	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0773c	ggtA	19	40.3	44.1	54.1	43.8	44.4	49.6	-0.384	-0.268	0.000	-0.276	-0.261	-0.115	60.5	49.3	66.3	54.3	56.2	55.4	0.67	0.89	0.82	0.81	0.79	0.89	0.463651	1.000000	-
Rv0774c	-	9	119.6	98.4	92.1	105.7	100.6	101.1	0.359	0.089	0.000	0.189	0.121	0.127	170.0	136.2	118.5	118.9	129.4	140.0	0.70	0.72	0.78	0.89	0.78	0.72	0.858869	1.000000	-
Rv0775	-	9	528.9	444.0	561.0	468.6	492.7	454.7	-0.084	-0.334	0.000	-0.257	-0.186	-0.300	528.9	444.0	561.0	468.6	492.7	454.7	1.00	1.00	1.00	1.00	1.00	1.00	0.975826	1.000000	-
Rv0776c	-	14	245.0	213.2	267.9	213.7	233.8	259.9	-0.126	-0.323	0.000	-0.319	-0.192	-0.043	285.8	248.7	288.5	272.0	272.8	303.2	0.86	0.86	0.93	0.79	0.86	0.86	0.902607	1.000000	-
Rv0777	purB	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0778	cyp126	17	87.0	89.1	77.6	80.1	89.7	79.1	0.155	0.188	0.000	0.043	0.196	0.025	96.5	97.8	101.5	86.9	108.9	99.6	0.90	0.91	0.76	0.92	0.82	0.79	0.430512	1.000000	-
Rv0779c	-	6	95.0	94.2	53.6	62.4	69.6	81.6	0.770	0.758	0.000	0.202	0.348	0.563	95.0	94.2	58.5	74.9	69.6	81.6	1.00	1.00	0.92	0.83	1.00	1.00	0.176950	1.000000	-
Rv0780	hemH	23	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0781	ptrBa	24	24.8	24.2	32.9	24.1	29.3	17.9	-0.348	-0.377	0.000	-0.385	-0.147	-0.728	40.6	41.5	46.5	42.2	42.6	37.4	0.61	0.58	0.71	0.57	0.69	0.48	0.356601	1.000000	-
Rv0782	ptrBb	37	27.1	17.9	32.8	28.8	30.8	27.5	-0.238	-0.723	0.000	-0.163	-0.081	-0.220	51.0	32.4	52.8	54.2	50.6	44.2	0.53	0.55	0.62	0.53	0.61	0.62	0.239213	1.000000	-
Rv0783c	emrB	23	44.6	42.6	41.5	37.5	41.5	37.6	0.092	0.033	0.000	-0.129	-0.002	-0.127	62.8	63.2	57.9	56.3	56.1	59.7	0.71	0.67	0.72	0.67	0.74	0.63	0.926127	1.000000	-
Rv0784	-	8	68.4	20.6	122.6	63.7	85.7	38.6	-0.797	-2.317	0.000	-0.893	-0.492	-1.550	117.3	41.2	140.1	95.5	124.7	88.2	0.58	0.50	0.88	0.67	0.69	0.44	0.028681	0.313062	-
Rv0785	-	29	62.1	61.9	69.1	53.4	54.5	55.1	-0.143	-0.147	0.000	-0.343	-0.316	-0.301	90.1	85.5	91.1	80.1	70.3	69.5	0.69	0.72	0.76	0.67	0.78	0.79	0.857958	1.000000	-
Rv0786c	-	11	34.7	32.2	32.4	31.0	34.9	35.7	0.086	-0.008	0.000	-0.058	0.091	0.121	47.8	50.6	54.9	48.7	54.8	43.6	0.73	0.64	0.59	0.64	0.64	0.82	0.924113	1.000000	-
Rv0787	-	14	121.2	125.1	121.8	120.4	126.8	109.5	-0.007	0.037	0.000	-0.016	0.055	-0.147	145.5	140.1	148.3	129.7	142.0	139.4	0.83	0.89	0.82	0.93	0.89	0.79	0.920676	1.000000	-
Rv0787A	-	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0788	purQ	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0789c	-	7	51.3	53.8	56.9	54.7	42.5	51.9	-0.136	-0.074	0.000	-0.052	-0.380	-0.121	63.3	53.8	72.4	57.4	45.8	55.9	0.81	1.00	0.79	0.95	0.93	0.93	0.660167	1.000000	-
Rv0790c	-	20	111.0	94.5	96.0	120.0	107.3	102.5	0.200	-0.022	0.000	0.308	0.154	0.091	141.6	121.9	132.4	150.0	143.1	132.3	0.78	0.78	0.72	0.80	0.75	0.78	0.993381	1.000000	-
Rv0791c	-	12	78.4	117.4	105.5	111.2	117.1	109.3	-0.406	0.148	0.000	0.073	0.144	0.048	97.3	140.9	126.6	125.1	140.5	124.9	0.81	0.83	0.83	0.89	0.83	0.88	0.944980	1.000000	-
Rv0792c	-	17	118.2	152.2	109.2	130.6	116.7	134.5	0.109	0.461	0.000	0.248	0.092	0.289	140.2	172.5	132.6	170.8	141.7	147.5	0.84	0.88	0.82	0.76	0.82	0.91	0.756634	1.000000	-
Rv0793	-	8	228.9	232.1	239.0	248.4	221.9	222.9	-0.061	-0.042	0.000	0.054	-0.105	-0.099	228.9	232.1	239.0	248.4	221.9	222.9	1.00	1.00	1.00	1.00	1.00	1.00	0.990920	1.000000	-
Rv0794c	-	15	175.4	136.4	147.7	144.9	163.6	152.8	0.240	-0.111	0.000	-0.027	0.143	0.047	213.3	146.2	164.1	163.0	188.8	183.3	0.82	0.93	0.90	0.89	0.87	0.83	0.855907	1.000000	-
Rv0795	-	4	229.6	235.4	211.5	247.8	223.2	172.5	0.116	0.151	0.000	0.224	0.076	-0.286	229.6	235.4	211.5	247.8	255.0	172.5	1.00	1.00	1.00	1.00	0.88	1.00	0.802110	1.000000	-
Rv0796	-	21	287.5	305.6	328.2	312.6	271.9	292.2	-0.188	-0.101	0.000	-0.069	-0.267	-0.165	377.4	388.9	430.8	386.1	335.9	331.7	0.76	0.79	0.76	0.81	0.81	0.88	0.982134	1.000000	-
Rv0797	-	9	156.9	185.5	204.5	190.3	189.7	190.2	-0.372	-0.137	0.000	-0.101	-0.106	-0.102	156.9	185.5	204.5	190.3	189.7	214.0	1.00	1.00	1.00	1.00	1.00	0.89	0.153407	0.956397	-
Rv0798c	cfp29	14	75.3	72.9	73.5	72.5	71.2	87.9	0.034	-0.011	0.000	-0.017	-0.041	0.243	102.0	92.8	85.7	101.6	90.7	94.6	0.74	0.79	0.86	0.71	0.79	0.93	0.700194	1.000000	-
Rv0799c	-	9	55.5	70.6	54.3	64.5	70.9	63.0	0.030	0.350	0.000	0.229	0.356	0.197	75.0	84.7	75.2	91.6	79.7	80.9	0.74	0.83	0.72	0.70	0.89	0.78	0.975559	1.000000	-
Rv0800	pepC	13	145.4	143.7	136.6	133.1	151.0	108.7	0.087	0.070	0.000	-0.036	0.140	-0.316	182.9	162.4	154.4	162.2	163.6	128.5	0.79	0.88	0.88	0.82	0.92	0.85	0.959120	1.000000	-
Rv0801	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0802c	-	15	80.2	67.7	68.9	65.4	64.4	64.7	0.205	-0.024	0.000	-0.071	-0.091	-0.084	92.5	78.1	98.4	84.0	77.2	71.9	0.87	0.87	0.70	0.78	0.83	0.90	0.805747	1.000000	-
Rv0803	purL	32	0.5	0.0	0.0	0.0	0.0	0.0	0.130	0.000	0.000	0.000	0.000	0.000	45.2	0.0	0.0	0.0	0.0	0.0	0.01	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0804	-	6	182.6	197.9	177.2	204.2	187.9	162.8	0.042	0.155	0.000	0.199	0.082	-0.119	182.6	237.5	177.2	204.2	225.5	195.3	1.00	0.83	1.00	1.00	0.83	0.83	0.141957	0.919495	-
Rv0805	-	15	185.3	142.2	166.2	97.9	109.5	141.6	0.152	-0.218	0.000	-0.735	-0.581	-0.224	185.3	152.4	191.8	100.1	113.2	141.6	1.00	0.93	0.87	0.98	0.97	1.00	0.002005	0.036525	-
Rv0806c	cpsY	41	118.2	137.6	94.3	159.2	129.9	135.2	0.310	0.522	0.000	0.725	0.441	0.497	137.1	152.5	112.1	167.4	134.8	154.0	0.86	0.90	0.84	0.95	0.96	0.88	0.006298	0.095328	-
Rv0807	-	2	58.8	86.2	104.4	78.9	92.4	58.1	-0.778	-0.262	0.000	-0.382	-0.167	-0.794	70.5	86.2	104.4	78.9	92.4	116.2	0.83	1.00	1.00	1.00	1.00	0.50	0.381159	1.000000	-
Rv0808	purF	25	0.5	1.2	0.3	0.6	0.9	0.4	0.074	0.243	0.000	0.089	0.178	0.041	13.2	15.2	12.6	14.7	15.7	10.1	0.04	0.08	0.02	0.04	0.06	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0809	purM	11	0.0	0.0	0.0	0.0	1.3	0.0	0.000	0.000	0.000	0.000	0.337	0.000	0.0	0.0	0.0	0.0	28.9	0.0	0.00	0.00	0.00	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0810c	-	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0811c	-	15	0.4	0.0	0.0	0.0	0.0	0.4	0.102	0.000	0.000	0.000	0.000	0.100	16.4	0.0	0.0	0.0	0.0	10.8	0.02	0.00	0.00	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0812	-	15	2.2	4.3	1.7	1.0	1.5	2.3	0.100	0.483	0.000	-0.161	-0.039	0.125	19.4	18.6	12.6	22.0	15.0	11.4	0.11	0.23	0.13	0.04	0.10	0.20	0.240298	1.000000	-
Rv0813c	-	13	213.0	205.5	243.7	247.5	210.9	238.2	-0.190	-0.241	0.000	0.022	-0.204	-0.032	213.0	205.5	243.7	247.5	210.9	238.2	1.00	1.00	1.00	1.00	1.00	1.00	0.663980	1.000000	-
Rv0814c	sseC2	2	307.9	328.8	356.1	320.7	336.5	241.7	-0.207	-0.113	0.000	-0.149	-0.081	-0.549	307.9	328.8	356.1	320.7	336.5	241.7	1.00	1.00	1.00	1.00	1.00	1.00	0.604576	1.000000	-
Rv0815c	cysA2	14	176.9	187.2	188.9	194.7	196.3	195.0	-0.092	-0.013	0.000	0.043	0.054	0.045	176.9	187.2	195.9	194.7	196.3	195.0	1.00	1.00	0.96	1.00	1.00	1.00	0.944657	1.000000	-
Rv0816c	thiX	3	171.7	125.9	137.6	117.4	91.4	61.0	0.309	-0.124	0.000	-0.221	-0.565	-1.111	171.7	188.8	165.2	117.4	137.1	61.0	1.00	0.67	0.83	1.00	0.67	1.00	0.071042	0.604860	-
Rv0817c	-	14	0.5	0.4	0.0	0.0	0.0	0.0	0.147	0.103	0.000	0.000	0.000	0.000	22.6	10.4	0.0	0.0	0.0	0.0	0.02	0.04	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0818	-	7	132.0	142.5	164.8	286.1	363.6	152.6	-0.310	-0.203	0.000	0.778	1.118	-0.108	132.0	142.5	164.8	286.1	363.6	152.6	1.00	1.00	1.00	1.00	1.00	1.00	0.000024	0.000695	-
Rv0819	-	10	166.5	117.8	151.8	106.9	170.3	110.6	0.129	-0.353	0.000	-0.487	0.161	-0.440	172.2	130.9	151.8	114.5	170.3	110.6	0.97	0.90	1.00	0.93	1.00	1.00	0.241811	1.000000	-
Rv0820	phoT	10	23.7	33.9	41.3	78.4	133.7	24.6	-0.690	-0.249	0.000	0.849	1.583	-0.646	37.4	42.4	51.6	90.4	148.5	28.9	0.63	0.80	0.80	0.87	0.90	0.85	0.000000	0.000000	-
Rv0821c	phoY2	5	22.8	27.6	49.3	36.5	28.9	43.8	-0.964	-0.738	0.000	-0.389	-0.682	-0.155	24.5	27.6	54.8	39.1	28.9	43.8	0.93	1.00	0.90	0.93	1.00	1.00	0.005976	0.091938	-
Rv0822c	-	27	160.2	155.7	161.4	155.0	160.5	181.0	-0.010	-0.050	0.000	-0.057	-0.008	0.160	170.8	155.7	167.6	163.0	163.5	187.9	0.94	1.00	0.96	0.95	0.98	0.96	0.731095	1.000000	-
Rv0823c	-	16	300.6	266.2	304.0	274.0	266.3	289.4	-0.016	-0.188	0.000	-0.147	-0.188	-0.070	300.6	283.9	313.8	299.0	274.9	308.7	1.00	0.94	0.97	0.92	0.97	0.94	0.735476	1.000000	-
Rv0824c	desA1	18	0.0	0.0	0.0	0.0	0.0	0.3	0.000	0.000	0.000	0.000	0.000	0.084	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0825c	-	10	174.3	182.4	172.5	182.3	158.1	167.1	0.015	0.078	0.000	0.077	-0.122	-0.045	180.3	182.4	172.5	182.3	158.1	167.1	0.97	1.00	1.00	1.00	1.00	1.00	0.961428	1.000000	-
Rv0826	-	18	200.1	193.7	229.8	202.4	183.1	193.1	-0.195	-0.241	0.000	-0.179	-0.320	-0.246	203.9	205.1	236.4	214.3	183.1	198.6	0.98	0.94	0.97	0.94	1.00	0.97	0.851922	1.000000	-
Rv0827c	-	3	207.8	206.0	234.6	174.0	158.8	223.9	-0.171	-0.183	0.000	-0.421	-0.548	-0.066	207.8	206.0	234.6	174.0	158.8	223.9	1.00	1.00	1.00	1.00	1.00	1.00	0.878139	1.000000	-
Rv0828c	-	10	150.0	146.0	131.7	132.3	149.3	139.1	0.181	0.143	0.000	0.006	0.174	0.076	173.1	153.7	138.7	141.8	157.1	154.5	0.87	0.95	0.95	0.93	0.95	0.90	0.980898	1.000000	-
Rv0829	-	3	127.6	160.7	154.3	126.8	112.2	110.6	-0.265	0.057	0.000	-0.273	-0.442	-0.462	143.5	160.7	185.1	126.8	112.2	110.6	0.89	1.00	0.83	1.00	1.00	1.00	0.894312	1.000000	-
Rv0830	-	18	248.4	226.8	241.4	263.7	243.0	256.1	0.040	-0.089	0.000	0.125	0.009	0.083	253.1	233.2	255.6	263.7	243.0	256.1	0.98	0.97	0.94	1.00	1.00	1.00	0.736216	1.000000	-
Rv0831c	-	18	155.0	182.5	170.9	159.1	172.3	185.2	-0.137	0.092	0.000	-0.101	0.012	0.113	157.9	182.5	181.0	159.1	172.3	185.2	0.98	1.00	0.94	1.00	1.00	1.00	0.463851	1.000000	-
Rv0832	PE_PGRS12	3	305.6	362.0	242.4	336.5	315.1	241.4	0.328	0.569	0.000	0.465	0.372	-0.006	305.6	434.4	363.5	336.5	315.1	362.1	1.00	0.83	0.67	1.00	1.00	0.67	0.374224	1.000000	-
Rv0833	PE_PGRS13	10	66.8	76.4	74.5	54.5	74.2	61.5	-0.146	0.034	0.000	-0.418	-0.005	-0.257	91.1	117.6	106.4	81.7	106.1	123.1	0.73	0.65	0.70	0.67	0.70	0.50	0.589186	1.000000	-
Rv0834c	PE_PGRS14	23	159.4	193.1	165.2	163.5	151.2	153.4	-0.050	0.219	0.000	-0.015	-0.124	-0.104	186.5	201.9	180.9	176.2	165.6	168.0	0.86	0.96	0.91	0.93	0.91	0.91	0.910108	1.000000	-
Rv0835	lpqQ	14	91.3	90.8	92.6	106.9	86.3	109.6	-0.020	-0.026	0.000	0.198	-0.097	0.231	106.5	94.2	103.7	109.6	92.9	113.6	0.86	0.96	0.89	0.98	0.93	0.96	0.765961	1.000000	-
Rv0836c	-	8	217.0	205.1	185.0	187.7	194.5	166.1	0.225	0.145	0.000	0.020	0.071	-0.151	248.0	205.1	185.0	187.7	222.3	166.1	0.88	1.00	1.00	1.00	0.88	1.00	0.341835	1.000000	-
Rv0837c	-	22	187.9	204.5	216.3	217.2	211.4	193.4	-0.198	-0.079	0.000	0.006	-0.033	-0.158	213.9	214.3	226.6	224.0	216.3	197.9	0.88	0.95	0.95	0.97	0.98	0.98	0.767604	1.000000	-
Rv0838	lpqR	7	162.2	167.1	153.4	144.1	167.8	176.4	0.078	0.119	0.000	-0.088	0.126	0.195	162.2	167.1	153.4	144.1	167.8	176.4	1.00	1.00	1.00	1.00	1.00	1.00	0.927125	1.000000	-
Rv0839	-	10	124.8	125.8	126.0	134.8	124.4	130.6	-0.013	-0.003	0.000	0.093	-0.018	0.050	144.0	139.7	140.0	134.8	130.9	130.6	0.87	0.90	0.90	1.00	0.95	1.00	0.601185	1.000000	-
Rv0840c	pip	8	23.5	13.4	9.7	10.1	14.0	17.4	0.950	0.316	0.000	0.033	0.364	0.602	31.3	17.8	22.3	20.2	17.2	25.3	0.75	0.75	0.44	0.50	0.81	0.69	0.014772	0.187110	-
Rv0841	-	3	163.9	198.4	162.5	146.6	223.1	202.4	0.012	0.281	0.000	-0.144	0.446	0.308	163.9	198.4	162.5	146.6	223.1	202.4	1.00	1.00	1.00	1.00	1.00	1.00	0.932439	1.000000	-
Rv0842	-	21	80.6	99.8	82.7	95.8	92.4	97.8	-0.034	0.257	0.000	0.201	0.152	0.230	99.6	116.4	99.2	131.1	114.1	114.2	0.81	0.86	0.83	0.73	0.81	0.86	0.641643	1.000000	-
Rv0843	-	17	105.6	133.3	112.5	123.7	110.8	129.3	-0.088	0.235	0.000	0.131	-0.021	0.193	128.2	141.6	123.4	153.9	129.9	141.9	0.82	0.94	0.91	0.80	0.85	0.91	0.634336	1.000000	-
Rv0844c	narL	9	569.5	444.1	444.4	481.1	485.2	421.3	0.354	-0.001	0.000	0.114	0.125	-0.076	569.5	444.1	444.4	481.1	485.2	421.3	1.00	1.00	1.00	1.00	1.00	1.00	0.575357	1.000000	-
Rv0845	-	23	62.7	66.0	65.2	55.5	68.1	54.1	-0.052	0.017	0.000	-0.214	0.060	-0.248	83.2	86.7	93.7	79.8	78.4	59.3	0.75	0.76	0.70	0.70	0.87	0.91	0.215912	1.000000	-
Rv0846c	-	28	41.0	51.9	50.8	44.8	44.8	41.7	-0.278	0.029	0.000	-0.165	-0.162	-0.257	61.5	69.2	67.7	66.0	61.3	64.8	0.67	0.75	0.75	0.68	0.73	0.64	0.854116	1.000000	-
Rv0847	lpqS	6	239.8	205.3	215.0	227.5	172.7	180.3	0.154	-0.066	0.000	0.080	-0.309	-0.248	308.3	205.3	258.1	273.0	207.2	196.7	0.78	1.00	0.83	0.83	0.83	0.92	0.825842	1.000000	-
Rv0848	cysK2	26	66.8	59.4	76.1	66.7	69.9	62.9	-0.176	-0.332	0.000	-0.177	-0.114	-0.255	100.2	81.3	101.5	81.3	84.6	68.2	0.67	0.73	0.75	0.82	0.83	0.92	0.122691	0.833964	-
Rv0849	-	21	121.4	130.7	121.4	117.8	113.0	126.3	0.000	0.102	0.000	-0.042	-0.099	0.054	136.6	156.9	150.0	145.5	135.6	139.6	0.89	0.83	0.81	0.81	0.83	0.90	0.877673	1.000000	-
Rv0850	-	8	52.5	78.4	60.6	57.9	64.2	66.8	-0.189	0.347	0.000	-0.060	0.078	0.130	57.3	96.5	107.7	73.1	85.6	89.0	0.92	0.81	0.56	0.79	0.75	0.75	0.139838	0.912113	-
Rv0851c	-	9	100.6	81.3	106.6	86.4	119.0	80.9	-0.080	-0.372	0.000	-0.288	0.152	-0.377	129.4	97.5	147.6	122.8	142.8	97.1	0.78	0.83	0.72	0.70	0.83	0.83	0.973044	1.000000	-
Rv0852	fadD16	13	68.9	61.8	56.8	57.3	73.7	83.6	0.258	0.112	0.000	0.012	0.350	0.521	76.7	69.8	77.7	69.8	83.3	103.6	0.90	0.88	0.73	0.82	0.88	0.81	0.444435	1.000000	-
Rv0853c	pdc	23	103.3	102.7	114.5	127.9	100.4	114.3	-0.142	-0.149	0.000	0.154	-0.181	-0.002	129.5	139.0	135.0	173.1	131.9	138.4	0.80	0.74	0.85	0.74	0.76	0.83	0.530267	1.000000	-
Rv0854	-	6	112.1	100.4	109.0	96.6	96.2	121.3	0.039	-0.113	0.000	-0.165	-0.171	0.148	144.1	150.6	163.4	124.2	128.3	145.5	0.78	0.67	0.67	0.78	0.75	0.83	0.997686	1.000000	-
Rv0855	far	12	90.0	89.1	87.9	106.7	80.7	108.9	0.032	0.019	0.000	0.266	-0.117	0.294	108.0	101.9	105.5	116.4	84.2	118.8	0.83	0.88	0.83	0.92	0.96	0.92	0.850737	1.000000	-
Rv0856	-	5	81.5	94.6	65.0	98.6	96.4	125.0	0.304	0.509	0.000	0.565	0.533	0.892	94.0	118.3	81.3	123.3	120.5	138.9	0.87	0.80	0.80	0.80	0.80	0.90	0.704133	1.000000	-
Rv0857	-	6	204.7	186.0	174.1	149.0	151.0	193.0	0.228	0.093	0.000	-0.218	-0.198	0.145	245.7	186.0	208.9	157.7	151.0	210.5	0.83	1.00	0.83	0.94	1.00	0.92	0.556092	1.000000	-
Rv0858c	-	19	157.9	201.4	163.5	189.6	156.9	170.4	-0.049	0.292	0.000	0.207	-0.058	0.058	173.1	218.6	177.6	196.4	170.4	196.2	0.91	0.92	0.92	0.96	0.92	0.87	0.648788	1.000000	-
Rv0859	fadA	7	305.9	291.0	282.0	324.4	289.7	244.8	0.115	0.045	0.000	0.199	0.039	-0.200	338.1	291.0	282.0	324.4	289.7	244.8	0.90	1.00	1.00	1.00	1.00	1.00	0.754181	1.000000	-
Rv0860	fadB	21	98.9	106.4	98.2	92.8	85.8	104.6	0.010	0.110	0.000	-0.077	-0.184	0.087	122.2	135.4	121.3	112.5	97.4	115.6	0.81	0.79	0.81	0.83	0.88	0.90	0.868591	1.000000	-
Rv0861c	ercc3	22	79.1	67.7	84.7	84.5	81.4	85.5	-0.093	-0.304	0.000	-0.004	-0.055	0.013	106.6	78.4	120.3	103.3	96.8	104.6	0.74	0.86	0.70	0.82	0.84	0.82	0.780327	1.000000	-
Rv0862c	-	27	137.6	111.4	131.1	133.9	116.1	112.0	0.068	-0.225	0.000	0.030	-0.168	-0.218	171.5	150.4	168.5	159.5	156.7	147.5	0.80	0.74	0.78	0.84	0.74	0.76	0.877013	1.000000	-
Rv0863	-	6	117.5	112.9	103.3	133.7	113.7	154.8	0.177	0.123	0.000	0.356	0.132	0.561	162.7	135.5	137.8	160.4	113.7	185.7	0.72	0.83	0.75	0.83	1.00	0.83	0.766857	1.000000	-
Rv0864	moaC	11	213.9	224.0	214.8	280.3	225.9	218.1	-0.006	0.059	0.000	0.376	0.071	0.021	213.9	246.4	225.0	298.4	225.9	266.5	1.00	0.91	0.95	0.94	1.00	0.82	0.139005	0.910057	-
Rv0865	mog	8	143.9	144.9	135.3	137.8	140.4	160.6	0.086	0.095	0.000	0.026	0.052	0.239	150.1	144.9	135.3	143.8	149.8	183.5	0.96	1.00	1.00	0.96	0.94	0.88	0.765604	1.000000	-
Rv0866	moaE2	3	125.8	95.2	134.2	129.8	115.5	127.6	-0.090	-0.473	0.000	-0.046	-0.208	-0.070	125.8	95.2	134.2	129.8	138.6	153.1	1.00	1.00	1.00	1.00	0.83	0.83	0.663718	1.000000	-
Rv0867c	rpfA	8	86.1	119.1	124.6	106.6	106.2	144.3	-0.509	-0.063	0.000	-0.215	-0.221	0.205	98.4	173.2	166.1	127.9	130.6	165.0	0.88	0.69	0.75	0.83	0.81	0.88	0.586938	1.000000	-
Rv0868c	moaD2	6	224.2	289.9	206.6	225.4	217.5	275.2	0.115	0.479	0.000	0.123	0.073	0.405	269.0	289.9	206.6	270.4	261.0	275.2	0.83	1.00	1.00	0.83	0.83	1.00	0.324076	1.000000	-
Rv0869c	moaA	14	205.0	200.8	231.8	198.2	230.4	191.1	-0.173	-0.202	0.000	-0.220	-0.008	-0.272	246.0	216.2	259.6	198.2	248.1	205.8	0.83	0.93	0.89	1.00	0.93	0.93	0.395420	1.000000	-
Rv0870c	-	4	205.6	139.1	185.5	153.1	153.6	205.5	0.145	-0.403	0.000	-0.269	-0.265	0.144	224.3	139.1	212.0	167.0	175.5	205.5	0.92	1.00	0.88	0.92	0.88	1.00	0.972984	1.000000	-
Rv0871	cspB	4	168.0	166.0	106.4	47.8	40.6	196.5	0.635	0.618	0.000	-1.077	-1.289	0.855	224.0	166.0	141.9	63.7	54.1	196.5	0.75	1.00	0.75	0.75	0.75	1.00	0.000388	0.008564	-
Rv0872c	PE_PGRS15	25	237.7	234.0	219.3	212.8	198.3	204.4	0.114	0.092	0.000	-0.042	-0.142	-0.099	297.1	292.5	281.1	249.4	215.5	243.4	0.80	0.80	0.78	0.85	0.92	0.84	0.781779	1.000000	-
Rv0873	fadE10	33	195.7	204.4	208.9	128.4	124.8	200.5	-0.092	-0.031	0.000	-0.682	-0.720	-0.058	210.6	210.8	229.8	139.6	132.9	210.1	0.93	0.97	0.91	0.92	0.94	0.95	0.014459	0.184905	-
Rv0874c	-	9	286.8	230.7	255.2	280.4	231.1	261.5	0.165	-0.143	0.000	0.133	-0.140	0.035	336.7	259.5	306.2	360.5	346.6	294.2	0.85	0.89	0.83	0.78	0.67	0.89	0.832858	1.000000	-
Rv0875c	-	11	117.0	162.1	116.4	101.6	66.9	146.8	0.007	0.461	0.000	-0.187	-0.756	0.322	133.2	178.4	134.8	115.7	77.4	161.5	0.88	0.91	0.86	0.88	0.86	0.91	0.202964	1.000000	-
Rv0876c	-	24	140.9	163.5	138.8	111.2	109.9	125.2	0.021	0.229	0.000	-0.307	-0.324	-0.143	153.7	170.6	151.4	121.4	122.7	130.7	0.92	0.96	0.92	0.92	0.90	0.96	0.660876	1.000000	-
Rv0877	-	15	362.2	275.9	327.4	221.4	180.0	235.1	0.144	-0.243	0.000	-0.555	-0.845	-0.470	379.1	275.9	338.7	221.4	192.9	235.1	0.96	1.00	0.97	1.00	0.93	1.00	0.044211	0.437724	-
Rv0878c	PPE13	14	122.2	121.7	120.1	114.7	99.6	112.4	0.024	0.019	0.000	-0.063	-0.257	-0.091	197.3	189.3	210.1	185.3	174.3	196.7	0.62	0.64	0.57	0.62	0.57	0.57	0.999091	1.000000	-
Rv0879c	-	2	30.2	63.8	48.5	40.2	107.8	111.1	-0.602	0.364	0.000	-0.244	1.077	1.119	60.5	127.6	96.9	80.3	215.6	222.2	0.50	0.50	0.50	0.50	0.50	0.50	0.003423	0.057620	-
Rv0880	-	1	26.2	25.4	28.1	27.6	29.8	20.3	-0.084	-0.123	0.000	-0.022	0.070	-0.390	26.2	25.4	28.1	27.6	29.8	20.3	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0881	-	13	104.3	112.0	110.7	119.3	113.8	122.8	-0.082	0.015	0.000	0.104	0.038	0.143	123.3	112.0	125.2	133.0	118.4	133.1	0.85	1.00	0.88	0.90	0.96	0.92	0.575810	1.000000	-
Rv0882	-	1	138.9	244.5	311.3	303.8	127.2	140.5	-1.136	-0.342	0.000	-0.035	-1.259	-1.121	138.9	244.5	311.3	303.8	127.2	140.5	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0883c	-	6	0.6	1.7	3.2	0.8	2.0	2.5	-0.531	-0.284	0.000	-0.487	-0.230	-0.128	11.6	10.2	37.9	14.8	11.8	14.8	0.06	0.17	0.08	0.06	0.17	0.17	0.058879	0.529332	-
Rv0884c	serC	12	14.7	15.4	15.5	21.2	37.1	5.8	-0.061	-0.011	0.000	0.351	1.037	-0.930	48.0	30.8	46.6	34.7	55.7	15.4	0.31	0.50	0.33	0.61	0.67	0.38	0.009842	0.137310	-
Rv0885	-	12	92.4	88.3	105.0	96.9	107.6	94.4	-0.176	-0.238	0.000	-0.111	0.033	-0.146	110.9	106.0	126.0	116.2	117.4	113.3	0.83	0.83	0.83	0.83	0.92	0.83	0.996939	1.000000	-
Rv0886	fprB	22	145.4	138.4	149.1	124.5	163.3	145.9	-0.035	-0.103	0.000	-0.251	0.127	-0.030	165.5	152.3	172.6	149.4	179.6	160.5	0.88	0.91	0.86	0.83	0.91	0.91	0.961831	1.000000	-
Rv0887c	-	4	62.8	33.0	53.0	53.8	65.0	63.7	0.224	-0.611	0.000	0.019	0.270	0.243	62.8	37.7	53.0	71.8	65.0	63.7	1.00	0.88	1.00	0.75	1.00	1.00	0.101786	0.747565	-
Rv0888	-	26	124.4	106.2	114.6	125.1	116.9	106.3	0.115	-0.104	0.000	0.122	0.028	-0.103	164.5	131.5	152.7	145.6	141.4	125.6	0.76	0.81	0.75	0.86	0.83	0.85	0.962947	1.000000	-
Rv0889c	citA	10	173.0	164.2	206.7	149.6	172.6	143.5	-0.251	-0.323	0.000	-0.454	-0.253	-0.512	207.5	164.2	217.6	166.2	172.6	159.4	0.83	1.00	0.95	0.90	1.00	0.90	0.395605	1.000000	-
Rv0890c	-	44	258.5	243.5	254.4	240.1	241.3	229.4	0.023	-0.062	0.000	-0.082	-0.075	-0.146	296.7	267.9	294.5	273.2	279.4	252.4	0.87	0.91	0.86	0.88	0.86	0.91	0.996615	1.000000	-
Rv0891c	-	23	128.5	115.6	140.3	129.4	134.8	130.3	-0.123	-0.269	0.000	-0.113	-0.056	-0.103	138.5	123.7	157.5	133.2	141.0	130.3	0.93	0.93	0.89	0.97	0.96	1.00	0.554940	1.000000	-
Rv0892	-	36	47.6	58.8	61.1	54.9	45.7	50.1	-0.328	-0.049	0.000	-0.142	-0.381	-0.263	65.9	83.1	84.5	75.0	59.9	66.7	0.72	0.71	0.72	0.73	0.76	0.75	0.605706	1.000000	-
Rv0893c	-	22	32.1	27.8	31.8	29.0	24.3	30.5	0.013	-0.166	0.000	-0.115	-0.327	-0.053	68.4	58.3	56.0	65.9	48.7	44.7	0.47	0.48	0.57	0.44	0.50	0.68	0.190031	1.000000	-
Rv0894	-	14	45.4	44.3	43.7	44.5	37.9	45.6	0.050	0.018	0.000	0.023	-0.183	0.056	73.3	65.3	87.4	88.9	55.8	71.0	0.62	0.68	0.50	0.50	0.68	0.64	0.798853	1.000000	-
Rv0895	-	26	198.3	170.0	190.6	166.1	181.9	176.1	0.056	-0.161	0.000	-0.193	-0.066	-0.111	209.0	192.1	210.9	175.1	201.2	199.1	0.95	0.88	0.90	0.95	0.90	0.88	0.662388	1.000000	-
Rv0896	gltA	23	25.2	8.8	33.6	4.0	5.8	6.1	-0.352	-1.482	0.000	-2.108	-1.841	-1.797	31.7	14.5	44.2	21.0	16.6	14.0	0.80	0.61	0.76	0.19	0.35	0.43	0.000000	0.000000	-
Rv0897c	-	18	156.9	134.3	153.4	148.1	142.1	138.8	0.032	-0.185	0.000	-0.049	-0.107	-0.140	180.3	142.2	172.6	159.9	170.6	156.1	0.87	0.94	0.89	0.93	0.83	0.89	0.924717	1.000000	-
Rv0898c	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0899	ompA	18	54.6	51.2	57.6	47.1	41.0	50.7	-0.070	-0.156	0.000	-0.265	-0.444	-0.168	73.8	59.4	74.1	60.5	54.7	57.1	0.74	0.86	0.78	0.78	0.75	0.89	0.840009	1.000000	-
Rv0900	-	2	177.2	132.2	195.2	206.6	189.5	239.8	-0.136	-0.545	0.000	0.079	-0.042	0.290	177.2	132.2	195.2	206.6	189.5	239.8	1.00	1.00	1.00	1.00	1.00	1.00	0.283627	1.000000	-
Rv0901	-	9	210.8	174.8	219.8	189.0	257.7	200.2	-0.059	-0.322	0.000	-0.212	0.225	-0.132	218.9	185.1	247.2	189.0	257.7	200.2	0.96	0.94	0.89	1.00	1.00	1.00	0.649012	1.000000	-
Rv0902c	prrB	12	11.6	0.8	13.0	0.0	0.0	0.4	-0.124	-1.629	0.000	-1.851	-1.851	-1.742	27.7	10.0	26.1	0.0	0.0	9.4	0.42	0.08	0.50	0.00	0.00	0.04	0.000000	0.000000	-
Rv0903c	prrA	8	11.3	0.0	8.7	0.0	0.0	0.0	0.255	-1.452	0.000	-1.452	-1.452	-1.452	34.0	0.0	23.1	0.0	0.0	0.0	0.33	0.00	0.38	0.00	0.00	0.00	0.000005	0.000163	-
Rv0904c	accD3	18	83.1	94.4	89.6	56.5	72.0	74.2	-0.102	0.072	0.000	-0.621	-0.296	-0.256	99.7	106.2	97.7	67.8	83.7	83.5	0.83	0.89	0.92	0.83	0.86	0.89	0.532406	1.000000	-
Rv0905	echA6	8	99.9	115.0	126.1	88.9	104.2	165.7	-0.322	-0.128	0.000	-0.481	-0.263	0.381	119.9	122.6	155.2	97.0	128.3	189.4	0.83	0.94	0.81	0.92	0.81	0.88	0.646047	1.000000	-
Rv0906	-	14	209.7	220.1	199.2	213.1	199.7	171.7	0.072	0.141	0.000	0.095	0.003	-0.208	238.0	256.8	242.5	223.7	232.9	218.6	0.88	0.86	0.82	0.95	0.86	0.79	0.765812	1.000000	-
Rv0907	-	33	40.4	44.6	51.4	43.0	46.7	42.6	-0.312	-0.186	0.000	-0.234	-0.126	-0.244	58.9	56.6	73.8	66.5	60.4	57.4	0.69	0.79	0.70	0.65	0.77	0.74	0.645585	1.000000	-
Rv0908	ctpE	29	127.4	116.9	112.4	120.3	125.8	118.5	0.174	0.054	0.000	0.095	0.156	0.074	151.9	135.6	135.8	134.2	145.9	137.5	0.84	0.86	0.83	0.90	0.86	0.86	0.995032	1.000000	-
Rv0909	-	2	3.8	12.7	10.9	7.0	9.5	17.5	-0.859	0.155	0.000	-0.402	-0.135	0.503	22.6	16.9	21.8	14.1	19.0	23.4	0.17	0.75	0.50	0.50	0.50	0.75	0.668913	1.000000	-
Rv0910	-	7	19.1	32.1	18.7	33.7	43.7	31.3	0.023	0.645	0.000	0.704	1.035	0.610	33.5	50.0	43.7	54.4	61.2	43.8	0.57	0.64	0.43	0.62	0.71	0.71	0.768692	1.000000	-
Rv0911	-	12	48.8	45.3	41.5	49.4	37.0	42.8	0.210	0.113	0.000	0.227	-0.146	0.039	58.5	49.4	49.8	52.3	37.0	46.6	0.83	0.92	0.83	0.94	1.00	0.92	0.306183	1.000000	-
Rv0912	-	4	254.4	126.7	217.2	187.2	253.8	167.7	0.223	-0.754	0.000	-0.210	0.220	-0.363	254.4	169.0	217.2	224.6	253.8	167.7	1.00	0.75	1.00	0.83	1.00	1.00	0.288874	1.000000	-
Rv0913c	-	38	32.0	31.5	33.1	22.8	26.9	22.2	-0.044	-0.064	0.000	-0.457	-0.260	-0.489	57.0	52.0	57.2	42.6	40.0	39.2	0.56	0.61	0.58	0.54	0.67	0.57	0.437965	1.000000	-
Rv0914c	-	15	197.5	197.8	161.7	201.3	172.1	179.0	0.280	0.283	0.000	0.307	0.088	0.142	227.8	228.3	179.7	226.5	191.3	198.8	0.87	0.87	0.90	0.89	0.90	0.90	0.992018	1.000000	-
Rv0915c	PPE14	15	144.3	132.1	105.3	134.1	111.2	105.5	0.436	0.314	0.000	0.335	0.075	0.002	202.9	152.4	166.2	177.4	123.5	137.6	0.71	0.87	0.63	0.76	0.90	0.77	0.508013	1.000000	-
Rv0916c	PE7	5	118.3	89.6	77.4	110.6	88.8	88.7	0.581	0.200	0.000	0.489	0.187	0.184	147.9	112.1	96.8	110.6	111.0	126.6	0.80	0.80	0.80	1.00	0.80	0.70	0.410342	1.000000	-
Rv0917	betP	40	125.1	106.6	107.9	105.1	111.6	99.3	0.205	-0.018	0.000	-0.037	0.046	-0.115	187.7	139.8	148.9	157.6	146.3	120.3	0.67	0.76	0.72	0.67	0.76	0.82	0.402692	1.000000	-
Rv0918	-	8	240.2	236.0	280.0	204.1	235.1	246.2	-0.217	-0.242	0.000	-0.447	-0.248	-0.182	240.2	236.0	280.0	204.1	235.1	246.2	1.00	1.00	1.00	1.00	1.00	1.00	0.756596	1.000000	-
Rv0919	-	8	265.8	268.0	252.0	289.0	273.5	261.1	0.076	0.088	0.000	0.194	0.116	0.050	265.8	268.0	268.8	289.0	273.5	261.1	1.00	1.00	0.94	1.00	1.00	1.00	0.945253	1.000000	-
Rv0920c	-	21	77.4	78.4	78.6	79.0	79.4	71.3	-0.021	-0.004	0.000	0.006	0.014	-0.133	92.0	86.6	91.7	88.8	83.4	90.7	0.84	0.90	0.86	0.89	0.95	0.79	0.763428	1.000000	-
Rv0921	-	7	80.3	80.1	67.4	89.0	76.8	72.5	0.236	0.233	0.000	0.376	0.176	0.097	84.3	80.1	67.4	89.0	82.7	78.0	0.95	1.00	1.00	1.00	0.93	0.93	0.826223	1.000000	-
Rv0922	-	16	106.6	110.2	102.3	105.2	98.8	116.0	0.057	0.103	0.000	0.039	-0.048	0.174	111.2	113.8	109.1	105.2	98.8	128.0	0.96	0.97	0.94	1.00	1.00	0.91	0.379076	1.000000	-
Rv0923c	-	16	191.9	174.1	187.7	172.7	197.5	161.2	0.031	-0.106	0.000	-0.116	0.072	-0.213	230.2	214.2	214.5	197.4	243.1	206.4	0.83	0.81	0.88	0.88	0.81	0.78	0.913843	1.000000	-
Rv0924c	mntH	17	70.4	69.1	74.0	101.2	117.9	106.2	-0.066	-0.092	0.000	0.427	0.638	0.494	81.6	78.3	78.6	107.5	125.3	116.5	0.86	0.88	0.94	0.94	0.94	0.91	0.004117	0.066766	-
Rv0925c	-	15	150.6	134.5	150.4	143.5	158.2	165.0	0.003	-0.155	0.000	-0.065	0.071	0.130	165.3	139.2	167.1	153.7	158.2	183.3	0.91	0.97	0.90	0.93	1.00	0.90	0.608787	1.000000	-
Rv0926c	-	18	99.5	106.2	107.8	101.2	113.2	95.2	-0.111	-0.021	0.000	-0.087	0.067	-0.172	109.6	112.5	121.3	109.3	119.9	103.8	0.91	0.94	0.89	0.93	0.94	0.92	0.992904	1.000000	-
Rv0927c	-	5	246.1	113.9	230.7	196.4	179.5	178.4	0.092	-0.987	0.000	-0.227	-0.353	-0.362	246.1	142.3	230.7	196.4	179.5	198.2	1.00	0.80	1.00	1.00	1.00	0.90	0.260509	1.000000	-
Rv0928	pstS3	21	20.9	32.8	45.1	78.8	112.5	27.2	-0.951	-0.405	0.000	0.742	1.231	-0.639	41.2	49.2	65.3	95.5	124.4	33.5	0.51	0.67	0.69	0.83	0.90	0.81	0.000000	0.000000	-
Rv0929	pstC2	16	23.4	29.6	31.9	62.3	114.7	17.9	-0.378	-0.095	0.000	0.866	1.697	-0.686	35.1	36.4	46.4	71.2	126.5	25.0	0.67	0.81	0.69	0.88	0.91	0.72	0.000000	0.000000	-
Rv0930	pstA1	15	22.9	34.5	37.8	64.3	129.3	34.2	-0.616	-0.114	0.000	0.697	1.651	-0.127	35.5	39.8	51.5	70.6	133.8	35.3	0.64	0.87	0.73	0.91	0.97	0.97	0.000000	0.000000	-
Rv0931c	pknD	40	156.3	164.1	152.1	158.7	160.5	153.8	0.038	0.106	0.000	0.059	0.075	0.015	178.6	177.5	184.4	178.0	178.3	168.5	0.88	0.93	0.82	0.89	0.90	0.91	0.975805	1.000000	-
Rv0932c	pstS2	23	49.4	56.0	47.5	64.0	65.1	58.3	0.052	0.217	0.000	0.396	0.418	0.270	79.2	80.5	87.3	100.4	90.7	78.8	0.62	0.70	0.54	0.64	0.72	0.74	0.844368	1.000000	-
Rv0933	pstB	12	94.3	96.9	94.9	92.6	85.1	113.2	-0.007	0.030	0.000	-0.033	-0.149	0.243	109.6	110.8	108.4	101.1	107.4	129.4	0.86	0.88	0.88	0.92	0.79	0.88	0.892964	1.000000	-
Rv0934	pstS1	19	175.2	175.6	199.5	166.3	198.5	161.6	-0.183	-0.179	0.000	-0.256	-0.007	-0.295	181.5	185.4	216.6	178.8	215.5	175.5	0.96	0.95	0.92	0.93	0.92	0.92	0.881160	1.000000	-
Rv0935	pstC1	12	180.5	149.2	172.0	185.3	166.9	143.3	0.068	-0.198	0.000	0.105	-0.042	-0.254	196.9	162.8	187.6	190.6	182.1	163.8	0.92	0.92	0.92	0.97	0.92	0.88	0.977484	1.000000	-
Rv0936	pstA2	19	86.9	95.7	86.3	99.7	79.5	97.5	0.008	0.141	0.000	0.197	-0.112	0.166	88.4	121.2	102.5	105.2	91.5	100.1	0.98	0.79	0.84	0.95	0.87	0.97	0.015013	0.189567	-
Rv0937c	-	12	24.0	15.7	19.6	23.0	17.4	23.0	0.240	-0.244	0.000	0.189	-0.135	0.191	34.6	22.2	31.3	33.1	24.5	26.3	0.69	0.71	0.62	0.69	0.71	0.88	0.424870	1.000000	-
Rv0938	-	38	85.2	62.5	72.8	66.2	68.9	69.0	0.213	-0.206	0.000	-0.129	-0.075	-0.072	123.0	98.9	117.8	87.7	95.2	100.9	0.69	0.63	0.62	0.75	0.72	0.68	0.400339	1.000000	-
Rv0939	-	26	52.0	47.7	51.1	56.3	60.6	54.7	0.024	-0.089	0.000	0.129	0.226	0.091	63.4	53.9	61.8	64.6	70.0	58.1	0.82	0.88	0.83	0.87	0.87	0.94	0.696246	1.000000	-
Rv0940c	-	13	43.4	41.7	55.9	61.0	43.2	47.0	-0.330	-0.383	0.000	0.117	-0.337	-0.228	65.1	54.2	80.7	76.7	62.4	55.5	0.67	0.77	0.69	0.79	0.69	0.85	0.769615	1.000000	-
Rv0941c	-	8	213.1	195.5	185.2	188.1	192.2	210.7	0.198	0.077	0.000	0.022	0.052	0.182	213.1	208.6	185.2	205.2	192.2	240.8	1.00	0.94	1.00	0.92	1.00	0.88	0.456512	1.000000	-
Rv0942	-	7	103.3	104.1	77.3	113.7	122.1	119.3	0.397	0.407	0.000	0.528	0.627	0.595	103.3	112.1	90.1	113.7	122.1	128.5	1.00	0.93	0.86	1.00	1.00	0.93	0.339971	1.000000	-
Rv0943c	-	16	101.2	78.2	87.9	102.2	112.5	98.0	0.193	-0.158	0.000	0.207	0.339	0.149	124.5	89.4	104.1	114.0	128.6	112.0	0.81	0.88	0.84	0.90	0.88	0.88	0.913678	1.000000	-
Rv0944	-	7	130.8	157.3	104.4	135.3	126.9	114.3	0.313	0.569	0.000	0.359	0.270	0.126	152.6	183.5	132.8	157.8	126.9	133.4	0.86	0.86	0.79	0.86	1.00	0.86	0.765789	1.000000	-
Rv0945	-	7	45.4	70.8	69.6	67.0	83.4	79.7	-0.566	0.024	0.000	-0.050	0.245	0.184	59.6	90.1	88.5	100.5	116.7	111.6	0.76	0.79	0.79	0.67	0.71	0.71	0.491014	1.000000	-
Rv0946c	pgi	17	133.7	133.2	131.5	137.1	139.9	106.1	0.023	0.018	0.000	0.058	0.086	-0.298	166.4	156.2	154.2	139.9	153.4	124.4	0.80	0.85	0.85	0.98	0.91	0.85	0.367618	1.000000	-
Rv0948c	-	6	5.7	7.6	1.0	11.8	13.2	13.0	0.818	1.061	0.000	1.469	1.592	1.576	34.0	45.7	12.6	70.5	79.4	78.2	0.17	0.17	0.08	0.17	0.17	0.17	0.108907	0.781545	-
Rv0949	uvrD1	44	47.4	65.6	55.4	76.3	83.5	56.6	-0.204	0.225	0.000	0.429	0.552	0.030	64.5	78.0	69.6	92.4	96.7	70.2	0.73	0.84	0.80	0.83	0.86	0.81	0.003650	0.060940	-
Rv0950c	-	18	86.1	115.1	78.2	115.3	121.0	110.3	0.130	0.529	0.000	0.532	0.598	0.470	119.2	159.4	100.6	132.5	140.5	147.0	0.72	0.72	0.78	0.87	0.86	0.75	0.146050	0.930896	-
Rv0951	sucC	14	0.3	0.0	0.0	0.4	0.8	0.4	0.078	0.000	0.000	0.098	0.224	0.107	11.6	0.0	0.0	14.8	11.8	10.8	0.02	0.00	0.00	0.02	0.07	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0952	sucD	10	0.0	0.5	0.0	0.4	0.0	0.5	0.000	0.143	0.000	0.120	0.000	0.130	0.0	10.4	0.0	13.0	0.0	9.4	0.00	0.05	0.00	0.03	0.00	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0953c	-	10	179.2	180.5	183.8	182.9	209.8	184.0	-0.035	-0.025	0.000	-0.007	0.186	0.002	185.4	200.6	204.2	195.9	233.1	193.7	0.97	0.90	0.90	0.93	0.90	0.95	0.938114	1.000000	-
Rv0954	-	25	163.5	186.0	164.6	172.0	180.3	151.3	-0.010	0.171	0.000	0.061	0.128	-0.118	175.1	189.8	168.0	184.2	180.3	164.5	0.93	0.98	0.98	0.93	1.00	0.92	0.308020	1.000000	-
Rv0955	-	17	77.3	89.2	80.0	86.8	103.7	93.2	-0.047	0.149	0.000	0.111	0.355	0.209	98.5	94.8	104.6	110.6	125.9	102.3	0.78	0.94	0.76	0.78	0.82	0.91	0.557033	1.000000	-
Rv0956	purN	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0957	purH	20	0.0	0.0	0.3	0.0	0.0	0.2	-0.088	-0.088	0.000	-0.088	-0.088	-0.022	0.0	0.0	12.6	0.0	0.0	9.4	0.00	0.00	0.03	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv0958	-	11	158.0	187.0	197.9	174.7	154.7	145.2	-0.317	-0.080	0.000	-0.176	-0.346	-0.434	193.1	228.6	229.2	221.7	189.1	168.1	0.82	0.82	0.86	0.79	0.82	0.86	0.981191	1.000000	-
Rv0959	-	14	99.5	119.7	127.3	89.3	135.6	103.5	-0.340	-0.085	0.000	-0.488	0.087	-0.286	122.9	145.8	132.0	121.0	151.8	120.7	0.81	0.82	0.96	0.74	0.89	0.86	0.299600	1.000000	-
Rv0960	-	5	296.4	289.9	257.5	243.9	288.9	260.8	0.199	0.168	0.000	-0.077	0.163	0.018	296.4	362.4	321.8	304.9	361.1	260.8	1.00	0.80	0.80	0.80	0.80	1.00	0.484494	1.000000	-
Rv0961	-	7	92.6	87.4	100.1	91.4	86.6	118.6	-0.107	-0.186	0.000	-0.125	-0.198	0.234	108.0	111.2	116.8	106.6	93.3	151.0	0.86	0.79	0.86	0.86	0.93	0.79	0.720583	1.000000	-
Rv0962c	lprP	14	197.6	152.1	153.1	179.0	156.9	144.7	0.358	-0.010	0.000	0.219	0.034	-0.079	207.5	152.1	164.9	192.8	169.0	155.9	0.95	1.00	0.93	0.93	0.93	0.93	0.825503	1.000000	-
Rv0963c	-	10	145.5	141.4	152.7	159.8	158.3	137.1	-0.067	-0.107	0.000	0.064	0.051	-0.150	167.9	202.0	179.6	177.6	175.9	144.3	0.87	0.70	0.85	0.90	0.90	0.95	0.718192	1.000000	-
Rv0964c	-	5	179.9	180.7	188.0	226.2	180.3	194.3	-0.061	-0.056	0.000	0.261	-0.059	0.046	179.9	225.8	208.9	242.3	200.4	215.9	1.00	0.80	0.90	0.93	0.90	0.90	0.809919	1.000000	-
Rv0965c	-	6	146.4	105.0	154.5	134.4	115.5	140.6	-0.075	-0.536	0.000	-0.195	-0.405	-0.132	146.4	105.0	154.5	134.4	115.5	140.6	1.00	1.00	1.00	1.00	1.00	1.00	0.891496	1.000000	-
Rv0966c	-	9	286.6	227.8	247.3	263.4	262.0	223.4	0.209	-0.116	0.000	0.090	0.082	-0.143	286.6	227.8	247.3	284.5	262.0	223.4	1.00	1.00	1.00	0.93	1.00	1.00	0.627344	1.000000	-
Rv0967	-	1	114.8	193.5	165.7	177.5	224.6	298.6	-0.512	0.218	0.000	0.096	0.427	0.830	114.8	193.5	165.7	177.5	224.6	298.6	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0968	-	6	269.3	354.7	356.1	359.3	321.5	294.0	-0.396	-0.006	0.000	0.013	-0.146	-0.272	303.0	425.6	356.1	359.3	321.5	294.0	0.89	0.83	1.00	1.00	1.00	1.00	0.546222	1.000000	-
Rv0969	ctpV	19	258.9	257.7	236.0	220.6	229.6	226.7	0.131	0.124	0.000	-0.096	-0.039	-0.057	278.4	288.0	256.3	251.4	249.2	246.1	0.93	0.89	0.92	0.88	0.92	0.92	0.988976	1.000000	-
Rv0970	-	12	64.8	53.1	52.1	51.0	52.3	69.8	0.289	0.024	0.000	-0.027	0.004	0.390	80.4	70.7	83.4	68.0	62.7	83.8	0.81	0.75	0.62	0.75	0.83	0.83	0.859529	1.000000	-
Rv0971c	echA7	5	161.1	160.1	214.0	185.0	187.6	157.0	-0.399	-0.408	0.000	-0.205	-0.185	-0.435	201.3	177.9	237.8	231.3	187.6	196.2	0.80	0.90	0.90	0.80	1.00	0.80	0.881289	1.000000	-
Rv0972c	fadE12	16	96.7	82.2	102.9	83.5	102.6	74.2	-0.086	-0.308	0.000	-0.286	-0.004	-0.447	113.2	97.4	126.7	97.8	126.3	84.8	0.85	0.84	0.81	0.85	0.81	0.88	0.794964	1.000000	-
Rv0973c	accA2	20	59.0	52.3	64.0	42.9	43.2	38.9	-0.109	-0.270	0.000	-0.527	-0.517	-0.653	84.3	74.7	94.9	67.7	57.6	64.8	0.70	0.70	0.68	0.63	0.75	0.60	0.661727	1.000000	-
Rv0974c	accD2	19	47.0	45.1	46.7	41.3	45.9	41.6	0.009	-0.045	0.000	-0.157	-0.022	-0.147	62.3	74.5	61.1	57.5	62.3	63.3	0.75	0.61	0.76	0.72	0.74	0.66	0.565463	1.000000	-
Rv0975c	fadE13	18	140.0	128.3	117.4	128.0	135.5	113.9	0.245	0.123	0.000	0.120	0.199	-0.041	175.8	184.7	162.5	197.5	180.6	157.8	0.80	0.69	0.72	0.65	0.75	0.72	0.780640	1.000000	-
Rv0976c	-	16	170.5	163.5	190.0	173.9	167.1	182.7	-0.152	-0.211	0.000	-0.124	-0.180	-0.055	181.9	168.8	209.6	194.2	191.0	201.6	0.94	0.97	0.91	0.90	0.88	0.91	0.922340	1.000000	-
Rv0977	PE_PGRS16	25	119.8	110.7	116.3	111.5	88.4	89.0	0.041	-0.069	0.000	-0.059	-0.378	-0.367	224.7	184.5	193.9	214.3	157.8	178.1	0.53	0.60	0.60	0.52	0.56	0.50	0.943304	1.000000	-
Rv0978c	PE_PGRS17	7	492.5	502.3	446.0	422.5	409.5	382.9	0.141	0.170	0.000	-0.077	-0.122	-0.217	492.5	502.3	446.0	522.0	409.5	382.9	1.00	1.00	1.00	0.81	1.00	1.00	0.178843	1.000000	-
Rv0979c	-	1	35.6	0.0	6.3	141.4	42.5	0.0	1.844	-1.176	0.000	3.696	2.070	-1.176	35.6	0.0	12.6	141.4	42.5	0.0	1.00	0.00	0.50	1.00	1.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0979A	rpmF	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0980c	PE_PGRS18	14	304.9	293.8	314.1	310.1	252.3	233.7	-0.042	-0.095	0.000	-0.018	-0.311	-0.419	328.3	329.1	351.8	383.1	271.7	251.6	0.93	0.89	0.89	0.81	0.93	0.93	0.789038	1.000000	-
Rv0981	mprA	9	344.8	383.3	365.7	340.1	331.1	355.6	-0.083	0.067	0.000	-0.103	-0.141	-0.040	358.1	405.9	365.7	382.6	331.1	400.0	0.96	0.94	1.00	0.89	1.00	0.89	0.590257	1.000000	-
Rv0982	mprB	20	0.0	2.5	0.0	4.0	4.4	2.1	0.000	0.590	0.000	0.849	0.913	0.498	0.0	20.2	0.0	26.7	29.5	13.7	0.00	0.12	0.00	0.15	0.15	0.15	0.000694	0.014429	-
Rv0983	pepD	13	48.5	55.6	35.4	44.5	39.6	60.0	0.404	0.583	0.000	0.293	0.140	0.684	67.5	65.7	51.2	51.1	46.8	65.0	0.72	0.85	0.69	0.87	0.85	0.92	0.457524	1.000000	-
Rv0984	moaB2	5	168.8	142.4	135.6	117.2	141.2	161.6	0.307	0.069	0.000	-0.202	0.057	0.245	168.8	203.4	169.5	159.8	141.2	202.0	1.00	0.70	0.80	0.73	1.00	0.80	0.241085	1.000000	-
Rv0985c	mscL	9	79.6	86.8	59.6	65.2	68.2	114.9	0.389	0.506	0.000	0.121	0.180	0.893	97.7	111.5	89.4	92.7	76.7	137.9	0.81	0.78	0.67	0.70	0.89	0.83	0.431743	1.000000	-
Rv0986	-	21	18.6	17.0	21.2	20.7	17.5	24.2	-0.148	-0.254	0.000	-0.029	-0.222	0.159	28.7	32.4	38.7	37.2	31.9	35.1	0.65	0.52	0.55	0.56	0.55	0.69	0.298511	1.000000	-
Rv0987	-	85	22.1	19.3	26.9	24.8	23.9	29.5	-0.239	-0.396	0.000	-0.102	-0.146	0.109	47.3	36.0	58.7	45.4	40.2	49.1	0.47	0.54	0.46	0.55	0.59	0.60	0.015143	0.190270	-
Rv0988	-	37	12.0	19.6	17.1	18.0	17.8	18.8	-0.381	0.156	0.000	0.056	0.045	0.106	33.3	37.3	43.7	39.9	35.6	29.6	0.36	0.53	0.39	0.45	0.50	0.64	0.110951	0.784724	-
Rv0989c	grcC2	17	171.8	165.0	170.1	163.4	160.1	192.1	0.014	-0.043	0.000	-0.056	-0.084	0.171	186.5	180.9	192.7	170.1	170.1	192.1	0.92	0.91	0.88	0.96	0.94	1.00	0.752794	1.000000	-
Rv0990c	-	8	108.3	92.4	88.6	145.7	94.6	118.6	0.276	0.058	0.000	0.687	0.090	0.401	173.3	123.2	141.7	184.0	151.4	146.0	0.62	0.75	0.62	0.79	0.62	0.81	0.927108	1.000000	-
Rv0991c	-	1	230.9	148.7	131.3	141.8	150.8	139.7	0.792	0.173	0.000	0.107	0.193	0.086	230.9	148.7	131.3	141.8	150.8	139.7	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv0992c	-	6	496.4	492.5	510.2	413.7	470.9	390.6	-0.039	-0.050	0.000	-0.299	-0.114	-0.381	496.4	492.5	510.2	496.4	513.7	390.6	1.00	1.00	1.00	0.83	0.92	1.00	0.440773	1.000000	-
Rv0993	galU	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv0994	moeA1	11	271.7	203.0	270.1	174.2	214.7	188.3	0.009	-0.404	0.000	-0.619	-0.325	-0.509	280.2	203.0	297.1	185.4	214.7	188.3	0.97	1.00	0.91	0.94	1.00	1.00	0.285289	1.000000	-
Rv0995	rimJ	5	109.4	79.4	90.6	66.1	110.6	107.2	0.260	-0.180	0.000	-0.426	0.274	0.231	109.4	88.2	129.4	76.3	110.6	107.2	1.00	0.90	0.70	0.87	1.00	1.00	0.238677	1.000000	-
Rv0996	-	14	262.9	247.8	219.9	250.8	269.4	221.8	0.252	0.169	0.000	0.186	0.287	0.012	262.9	247.8	228.1	250.8	269.4	221.8	1.00	1.00	0.96	1.00	1.00	1.00	0.890974	1.000000	-
Rv0997	-	4	92.0	83.1	135.8	82.5	176.8	113.1	-0.538	-0.677	0.000	-0.685	0.369	-0.253	122.6	110.7	135.8	110.0	235.7	150.8	0.75	0.75	1.00	0.75	0.75	0.75	0.195958	1.000000	-
Rv0998	-	11	76.7	76.8	74.4	76.5	83.9	88.4	0.041	0.044	0.000	0.037	0.163	0.234	101.2	112.7	86.1	93.5	102.6	102.3	0.76	0.68	0.86	0.82	0.82	0.86	0.829094	1.000000	-
Rv0999	-	10	275.9	304.1	245.0	257.7	295.7	283.8	0.168	0.306	0.000	0.071	0.266	0.208	275.9	304.1	257.9	257.7	295.7	283.8	1.00	1.00	0.95	1.00	1.00	1.00	0.890187	1.000000	-
Rv1000c	-	7	511.8	428.6	456.0	472.0	412.5	436.7	0.165	-0.089	0.000	0.049	-0.143	-0.062	511.8	428.6	456.0	472.0	412.5	436.7	1.00	1.00	1.00	1.00	1.00	1.00	0.966096	1.000000	-
Rv1001	arcA	18	264.7	277.5	287.3	285.1	272.4	261.1	-0.116	-0.049	0.000	-0.011	-0.075	-0.136	269.7	277.5	323.2	290.5	306.5	268.6	0.98	1.00	0.89	0.98	0.89	0.97	0.268535	1.000000	-
Rv1002c	-	21	19.8	25.9	15.9	15.4	14.8	17.2	0.250	0.563	0.000	-0.035	-0.078	0.089	35.7	35.0	29.0	29.4	28.2	21.9	0.56	0.74	0.55	0.52	0.52	0.79	0.021972	0.254851	-
Rv1003	-	8	79.3	116.0	109.6	94.7	96.8	132.6	-0.443	0.078	0.000	-0.201	-0.171	0.264	90.7	132.6	125.3	98.8	110.7	151.6	0.88	0.88	0.88	0.96	0.88	0.88	0.016139	0.200376	-
Rv1004c	-	9	89.8	90.4	89.5	116.0	93.5	75.8	0.003	0.013	0.000	0.356	0.059	-0.226	115.4	101.7	94.8	120.5	105.2	97.5	0.78	0.89	0.94	0.96	0.89	0.78	0.523525	1.000000	-
Rv1005c	pabB	21	16.0	29.7	21.9	23.1	19.1	18.5	-0.360	0.365	0.000	0.061	-0.159	-0.196	335.7	623.1	460.5	484.9	267.7	259.1	0.05	0.05	0.05	0.05	0.07	0.07	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1006	-	37	181.8	232.4	158.5	243.0	248.6	196.9	0.192	0.538	0.000	0.601	0.633	0.304	195.9	242.2	175.1	249.8	259.1	211.1	0.93	0.96	0.91	0.97	0.96	0.93	0.004158	0.066898	-
Rv1007c	metG	23	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1008	tatD	11	287.1	294.0	295.5	310.1	300.9	272.3	-0.041	-0.007	0.000	0.069	0.026	-0.116	296.1	294.0	325.0	319.8	300.9	272.3	0.97	1.00	0.91	0.97	1.00	1.00	0.861001	1.000000	-
Rv1009	rpfB	9	100.7	97.0	84.1	113.9	124.7	97.8	0.246	0.195	0.000	0.416	0.542	0.207	143.0	134.3	116.5	139.8	172.7	117.4	0.70	0.72	0.72	0.81	0.72	0.83	0.967809	1.000000	-
Rv1010	ksgA	12	73.4	80.9	63.6	92.8	119.2	63.8	0.192	0.323	0.000	0.511	0.856	0.004	85.2	84.4	72.7	95.5	119.2	69.6	0.86	0.96	0.88	0.97	1.00	0.92	0.086906	0.688009	-
Rv1011	ispE	12	0.0	0.0	0.0	0.0	0.0	0.5	0.000	0.000	0.000	0.000	0.000	0.124	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1012	-	6	116.5	123.5	119.6	105.2	120.6	88.6	-0.035	0.045	0.000	-0.177	0.012	-0.412	139.9	148.2	143.5	126.2	144.7	106.3	0.83	0.83	0.83	0.83	0.83	0.83	0.997639	1.000000	-
Rv1013	pks16	21	62.8	120.9	61.1	69.7	83.2	94.4	0.037	0.929	0.000	0.176	0.415	0.587	72.0	120.9	67.6	70.8	83.2	94.4	0.87	1.00	0.90	0.98	1.00	1.00	0.000006	0.000186	-
Rv1014c	pth	11	0.0	0.5	0.0	0.0	0.0	0.0	0.000	0.126	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.05	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1015c	rplY	9	16.7	29.4	20.8	54.2	47.3	27.7	-0.252	0.413	0.000	1.197	1.018	0.339	32.2	40.7	46.9	63.7	53.2	49.8	0.52	0.72	0.44	0.85	0.89	0.56	0.011593	0.154697	-
Rv1016c	lpqT	6	70.2	95.9	64.8	112.2	99.6	96.3	0.107	0.532	0.000	0.748	0.583	0.537	126.3	191.9	111.1	202.0	132.8	165.1	0.56	0.50	0.58	0.56	0.75	0.58	0.875102	1.000000	-
Rv1017c	prsA	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1018c	glmU	23	0.2	0.0	0.0	0.0	0.0	0.2	0.048	0.000	0.000	0.000	0.000	0.066	11.6	0.0	0.0	0.0	0.0	10.8	0.01	0.00	0.00	0.00	0.00	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1019	-	7	283.9	344.5	348.1	390.0	348.3	319.2	-0.289	-0.015	0.000	0.162	0.001	-0.123	283.9	344.5	348.1	390.0	348.3	319.2	1.00	1.00	1.00	1.00	1.00	1.00	0.758390	1.000000	-
Rv1020	mfd	33	274.6	268.3	260.9	287.5	267.5	236.5	0.072	0.040	0.000	0.137	0.035	-0.139	295.4	295.2	287.0	312.8	294.3	264.5	0.93	0.91	0.91	0.92	0.91	0.89	0.986628	1.000000	-
Rv1021	-	12	119.1	116.2	128.1	125.5	96.2	125.7	-0.101	-0.136	0.000	-0.028	-0.395	-0.027	178.7	132.8	161.8	173.8	135.9	158.7	0.67	0.88	0.79	0.72	0.71	0.79	0.902200	1.000000	-
Rv1022	lpqU	13	76.7	77.1	73.9	83.3	77.5	81.2	0.050	0.056	0.000	0.163	0.064	0.128	106.8	95.4	91.5	104.8	84.0	105.6	0.72	0.81	0.81	0.79	0.92	0.77	0.890025	1.000000	-
Rv1023	eno	13	0.3	0.0	0.0	0.0	0.0	0.0	0.083	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.03	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1024	-	8	9.4	3.8	3.9	7.1	10.4	1.8	0.701	-0.017	0.000	0.453	0.793	-0.391	75.3	30.1	61.9	57.1	55.3	28.2	0.12	0.12	0.06	0.12	0.19	0.06	0.860426	1.000000	-
Rv1025	-	6	4.8	2.6	14.5	5.6	7.4	5.0	-1.001	-1.360	0.000	-0.883	-0.659	-0.972	28.5	31.3	87.1	25.1	44.2	29.7	0.17	0.08	0.17	0.22	0.17	0.17	0.204271	1.000000	-
Rv1026	-	6	75.7	95.9	42.7	58.3	67.3	49.0	0.758	1.080	0.000	0.407	0.598	0.178	80.1	95.9	73.2	74.9	80.7	53.4	0.94	1.00	0.58	0.78	0.83	0.92	0.099366	0.741066	-
Rv1027c	kdpE	10	72.4	69.8	89.8	54.2	50.4	65.2	-0.293	-0.341	0.000	-0.678	-0.774	-0.433	127.7	99.8	149.7	95.7	84.1	100.4	0.57	0.70	0.60	0.57	0.60	0.65	0.957282	1.000000	-
Rv1028c	kdpD	21	129.9	117.9	118.7	103.9	85.8	120.8	0.125	-0.009	0.000	-0.184	-0.446	0.025	154.4	133.8	131.2	119.0	97.4	133.5	0.84	0.88	0.90	0.87	0.88	0.90	0.888932	1.000000	-
Rv1028A	kdpF	3	97.4	27.4	62.3	67.4	44.2	60.1	0.605	-1.053	0.000	0.105	-0.452	-0.049	125.2	32.9	186.9	75.8	44.2	120.1	0.78	0.83	0.33	0.89	1.00	0.50	0.025453	0.283680	-
Rv1029	kdpA	25	131.0	115.5	129.3	110.6	119.4	133.5	0.018	-0.157	0.000	-0.217	-0.111	0.044	148.9	131.2	150.4	116.8	132.6	159.0	0.88	0.88	0.86	0.95	0.90	0.84	0.544129	1.000000	-
Rv1030	kdpB	12	137.3	180.4	185.2	172.5	152.4	175.9	-0.418	-0.037	0.000	-0.100	-0.272	-0.072	149.8	188.2	211.6	182.6	182.9	201.0	0.92	0.96	0.88	0.94	0.83	0.88	0.705619	1.000000	-
Rv1031	kdpC	9	114.8	116.6	138.6	130.2	142.2	109.8	-0.262	-0.240	0.000	-0.087	0.036	-0.323	119.2	149.9	146.7	130.2	142.2	123.5	0.96	0.78	0.94	1.00	1.00	0.89	0.135749	0.898243	-
Rv1032c	trcS	23	145.2	110.0	121.1	133.4	125.9	133.5	0.253	-0.132	0.000	0.135	0.054	0.135	172.7	120.5	135.8	167.4	137.9	139.5	0.84	0.91	0.89	0.80	0.91	0.96	0.241086	1.000000	-
Rv1033c	trcR	12	173.0	218.9	215.4	208.8	207.9	223.1	-0.309	0.023	0.000	-0.044	-0.050	0.050	194.6	218.9	246.2	227.8	217.0	223.1	0.89	1.00	0.88	0.92	0.96	1.00	0.567316	1.000000	-
Rv1034c	-	2	90.2	121.8	95.5	127.4	68.7	108.0	-0.078	0.335	0.000	0.398	-0.448	0.170	90.2	121.8	95.5	127.4	68.7	108.0	1.00	1.00	1.00	1.00	1.00	1.00	0.792806	1.000000	-
Rv1035c	-	4	161.7	144.5	84.4	109.0	115.7	98.3	0.898	0.741	0.000	0.349	0.432	0.207	161.7	144.5	96.5	109.0	115.7	112.3	1.00	1.00	0.88	1.00	1.00	0.88	0.631466	1.000000	-
Rv1036c	-	5	150.7	194.5	196.1	187.9	165.5	196.3	-0.369	-0.012	0.000	-0.060	-0.239	0.001	188.4	194.5	245.2	234.9	206.8	218.1	0.80	1.00	0.80	0.80	0.80	0.90	0.882921	1.000000	-
Rv1037c	esxI	3	318.7	359.8	325.2	293.0	383.6	411.8	-0.028	0.144	0.000	-0.148	0.235	0.336	318.7	359.8	325.2	293.0	383.6	411.8	1.00	1.00	1.00	1.00	1.00	1.00	0.630733	1.000000	-
Rv1038c	esxJ	3	258.5	251.9	283.7	194.0	255.6	253.1	-0.132	-0.168	0.000	-0.537	-0.147	-0.162	258.5	251.9	283.7	194.0	255.6	253.1	1.00	1.00	1.00	1.00	1.00	1.00	0.548668	1.000000	-
Rv1039c	PPE15	20	144.2	163.1	134.7	139.0	148.4	167.5	0.095	0.267	0.000	0.043	0.134	0.304	173.1	171.7	145.6	146.3	156.2	176.3	0.83	0.95	0.93	0.95	0.95	0.95	0.572113	1.000000	-
Rv1040c	PE8	7	185.9	228.6	229.6	213.6	199.5	197.7	-0.298	-0.006	0.000	-0.102	-0.198	-0.211	185.9	228.6	229.6	213.6	199.5	197.7	1.00	1.00	1.00	1.00	1.00	1.00	0.947584	1.000000	-
Rv1041c	-	16	291.5	277.4	260.5	291.0	246.2	255.6	0.160	0.089	0.000	0.157	-0.080	-0.027	304.2	277.4	260.5	291.0	246.2	255.6	0.96	1.00	1.00	1.00	1.00	1.00	0.804332	1.000000	-
Rv1042c	-	5	91.0	81.4	107.6	91.4	84.9	90.8	-0.231	-0.382	0.000	-0.224	-0.326	-0.233	105.0	81.4	107.6	91.4	84.9	90.8	0.87	1.00	1.00	1.00	1.00	1.00	0.788653	1.000000	-
Rv1043c	-	14	72.4	79.6	89.1	80.4	85.8	92.1	-0.282	-0.155	0.000	-0.140	-0.052	0.044	98.1	101.3	113.5	99.4	100.1	117.2	0.74	0.79	0.79	0.81	0.86	0.79	0.978641	1.000000	-
Rv1044	-	9	15.4	20.9	10.4	12.4	16.2	19.4	0.404	0.747	0.000	0.169	0.459	0.661	139.0	188.3	94.0	111.4	146.2	174.8	0.11	0.11	0.11	0.11	0.11	0.11	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1045	-	10	210.1	191.6	212.5	235.2	233.9	242.1	-0.016	-0.146	0.000	0.143	0.135	0.184	225.2	212.9	236.1	261.3	259.9	242.1	0.93	0.90	0.90	0.90	0.90	1.00	0.910218	1.000000	-
Rv1046c	-	4	224.2	298.5	292.6	288.5	277.5	254.8	-0.376	0.028	0.000	-0.020	-0.075	-0.196	224.2	298.5	292.6	288.5	277.5	254.8	1.00	1.00	1.00	1.00	1.00	1.00	0.854777	1.000000	-
Rv1047	-	15	236.2	246.3	268.3	250.9	253.8	236.0	-0.180	-0.121	0.000	-0.095	-0.079	-0.181	247.2	273.6	277.5	250.9	253.8	236.0	0.96	0.90	0.97	1.00	1.00	1.00	0.437758	1.000000	-
Rv1048c	-	21	158.9	184.1	157.7	175.8	171.7	177.1	0.010	0.216	0.000	0.152	0.119	0.162	185.4	220.9	184.0	205.0	189.8	218.8	0.86	0.83	0.86	0.86	0.90	0.81	0.741850	1.000000	-
Rv1049	-	4	250.8	259.3	263.8	294.6	288.4	243.6	-0.071	-0.024	0.000	0.157	0.126	-0.112	250.8	259.3	263.8	294.6	288.4	243.6	1.00	1.00	1.00	1.00	1.00	1.00	0.981946	1.000000	-
Rv1050	-	10	53.3	89.0	84.4	71.2	66.6	74.8	-0.615	0.073	0.000	-0.230	-0.320	-0.163	72.7	98.9	99.2	97.1	74.0	74.8	0.73	0.90	0.85	0.73	0.90	1.00	0.115765	0.799142	-
Rv1051c	-	8	60.8	69.7	70.8	64.8	70.7	71.1	-0.203	-0.020	0.000	-0.118	-0.000	0.006	91.2	101.4	94.3	86.4	94.3	103.4	0.67	0.69	0.75	0.75	0.75	0.69	0.998500	1.000000	-
Rv1052	-	4	55.6	84.3	102.9	79.3	101.0	102.1	-0.834	-0.273	0.000	-0.357	-0.026	-0.011	66.7	112.4	102.9	79.3	101.0	102.1	0.83	0.75	1.00	1.00	1.00	1.00	0.288926	1.000000	-
Rv1053c	-	6	40.0	59.3	59.4	57.6	61.7	70.8	-0.515	-0.001	0.000	-0.040	0.051	0.236	51.5	64.7	79.1	69.1	61.7	77.2	0.78	0.92	0.75	0.83	1.00	0.92	0.652139	1.000000	-
Rv1054	-	5	93.9	141.5	149.1	132.7	141.9	149.9	-0.640	-0.073	0.000	-0.163	-0.069	0.007	100.6	141.5	149.1	132.7	141.9	149.9	0.93	1.00	1.00	1.00	1.00	1.00	0.888737	1.000000	-
Rv1055	-	3	22.9	35.6	72.8	91.6	84.2	56.3	-1.478	-0.939	0.000	0.312	0.196	-0.344	25.8	35.6	72.8	91.6	84.2	67.6	0.89	1.00	1.00	1.00	1.00	0.83	0.002397	0.042883	-
Rv1056	-	20	217.3	222.7	218.2	231.9	203.1	206.0	-0.006	0.029	0.000	0.086	-0.101	-0.081	250.7	228.4	229.7	235.8	203.1	211.3	0.87	0.97	0.95	0.98	1.00	0.97	0.291786	1.000000	-
Rv1057	-	16	217.2	222.2	233.4	230.1	224.6	216.0	-0.102	-0.069	0.000	-0.020	-0.054	-0.109	231.7	237.1	240.9	230.1	231.8	216.0	0.94	0.94	0.97	1.00	0.97	1.00	0.729741	1.000000	-
Rv1058	fadD14	26	108.2	97.7	92.6	83.2	81.6	103.8	0.215	0.074	0.000	-0.146	-0.172	0.157	140.7	145.2	123.4	122.4	121.3	138.4	0.77	0.67	0.75	0.68	0.67	0.75	0.742306	1.000000	-
Rv1059	-	9	87.1	64.4	58.7	64.2	53.0	71.8	0.532	0.124	0.000	0.120	-0.135	0.270	106.9	77.3	70.4	72.3	53.0	80.8	0.81	0.83	0.83	0.89	1.00	0.89	0.257813	1.000000	-
Rv1060	-	5	121.2	127.6	110.7	150.4	131.8	122.1	0.125	0.197	0.000	0.426	0.241	0.135	121.2	141.8	110.7	161.1	164.7	152.6	1.00	0.90	1.00	0.93	0.80	0.80	0.163230	0.992819	-
Rv1061	-	13	176.7	148.2	191.7	162.5	172.3	191.0	-0.115	-0.360	0.000	-0.232	-0.150	-0.005	196.9	192.7	262.3	192.1	186.7	236.4	0.90	0.77	0.73	0.85	0.92	0.81	0.672851	1.000000	-
Rv1062	-	4	148.7	164.2	174.2	169.6	170.0	206.0	-0.222	-0.083	0.000	-0.037	-0.034	0.236	148.7	164.2	199.1	169.6	170.0	206.0	1.00	1.00	0.88	1.00	1.00	1.00	0.805260	1.000000	-
Rv1063c	-	15	254.9	235.0	256.2	219.8	205.4	196.9	-0.008	-0.122	0.000	-0.217	-0.312	-0.372	273.1	251.7	274.5	274.7	236.9	227.2	0.93	0.93	0.93	0.80	0.87	0.87	0.657051	1.000000	-
Rv1064c	lpqV	5	106.6	125.9	143.6	117.7	126.5	162.1	-0.414	-0.183	0.000	-0.277	-0.177	0.169	106.6	125.9	143.6	117.7	158.1	162.1	1.00	1.00	1.00	1.00	0.80	1.00	0.088243	0.694601	-
Rv1065	-	9	393.8	434.0	423.1	364.9	365.6	321.3	-0.102	0.036	0.000	-0.211	-0.208	-0.392	393.8	434.0	423.1	364.9	365.6	321.3	1.00	1.00	1.00	1.00	1.00	1.00	0.884092	1.000000	-
Rv1066	-	4	134.1	148.7	208.7	148.4	124.7	138.9	-0.620	-0.475	0.000	-0.479	-0.721	-0.571	178.8	148.7	208.7	161.9	166.3	138.9	0.75	1.00	1.00	0.92	0.75	1.00	0.527485	1.000000	-
Rv1067c	PE_PGRS19	14	316.5	298.1	303.0	287.5	260.0	283.2	0.062	-0.023	0.000	-0.075	-0.217	-0.096	391.0	347.8	326.3	377.3	316.6	330.5	0.81	0.86	0.93	0.76	0.82	0.86	0.834434	1.000000	-
Rv1068c	PE_PGRS20	11	220.4	212.8	167.4	197.1	186.7	185.2	0.387	0.337	0.000	0.229	0.153	0.142	330.6	334.4	230.2	260.2	256.7	271.7	0.67	0.64	0.73	0.76	0.73	0.68	0.944687	1.000000	-
Rv1069c	-	19	292.1	297.6	315.2	341.5	330.6	298.1	-0.108	-0.082	0.000	0.114	0.068	-0.079	333.0	332.7	332.7	341.5	330.6	314.6	0.88	0.89	0.95	1.00	1.00	0.95	0.136941	0.901641	-
Rv1070c	echA8	7	188.8	165.6	165.2	192.6	164.6	123.9	0.188	0.004	0.000	0.216	-0.005	-0.401	188.8	193.2	177.9	224.7	164.6	144.5	1.00	0.86	0.93	0.86	1.00	0.86	0.310681	1.000000	-
Rv1071c	echA9	11	415.3	469.6	467.6	474.3	439.4	343.0	-0.169	0.006	0.000	0.020	-0.089	-0.442	415.3	469.6	467.6	474.3	483.4	377.3	1.00	1.00	1.00	1.00	0.91	0.91	0.092456	0.708520	-
Rv1072	-	12	47.7	80.5	60.2	95.0	146.5	76.8	-0.307	0.392	0.000	0.617	1.217	0.327	57.2	80.5	65.6	100.5	152.9	87.7	0.83	1.00	0.92	0.94	0.96	0.88	0.000006	0.000196	-
Rv1073	-	19	218.0	247.7	264.9	259.0	230.7	260.1	-0.276	-0.095	0.000	-0.032	-0.195	-0.026	234.4	261.5	272.1	273.3	230.7	274.5	0.93	0.95	0.97	0.95	1.00	0.95	0.655262	1.000000	-
Rv1074c	fadA3	11	232.8	236.0	243.8	169.4	183.2	223.8	-0.065	-0.046	0.000	-0.513	-0.403	-0.121	247.8	236.0	255.5	174.7	183.2	223.8	0.94	1.00	0.95	0.97	1.00	1.00	0.799970	1.000000	-
Rv1075c	-	18	222.2	218.7	226.1	230.6	217.3	198.5	-0.025	-0.047	0.000	0.028	-0.056	-0.183	249.9	231.6	232.6	230.6	230.0	216.6	0.89	0.94	0.97	1.00	0.94	0.92	0.461716	1.000000	-
Rv1076	lipU	17	81.8	87.6	91.5	79.3	84.6	94.2	-0.153	-0.059	0.000	-0.194	-0.108	0.040	134.5	129.5	172.9	119.0	125.0	139.3	0.61	0.68	0.53	0.67	0.68	0.68	0.985748	1.000000	-
Rv1077	cbs	22	182.5	164.1	178.2	173.2	160.3	182.1	0.034	-0.116	0.000	-0.039	-0.148	0.031	194.3	180.5	186.7	181.5	167.9	182.1	0.94	0.91	0.95	0.95	0.95	1.00	0.839384	1.000000	-
Rv1078	pra	17	16.0	26.4	10.5	15.1	27.3	28.6	0.440	1.018	0.000	0.373	1.062	1.115	35.5	37.4	23.8	26.5	51.6	44.1	0.45	0.71	0.44	0.57	0.53	0.65	0.010657	0.144627	-
Rv1079	metB	17	118.3	111.5	114.4	113.9	108.0	108.5	0.046	-0.036	0.000	-0.006	-0.080	-0.074	154.7	118.5	129.7	129.1	122.4	136.6	0.76	0.94	0.88	0.88	0.88	0.79	0.599460	1.000000	-
Rv1080c	greA	6	8.2	17.8	4.2	13.5	23.2	12.7	0.521	1.307	0.000	1.007	1.615	0.945	24.6	26.6	16.8	24.3	34.8	19.1	0.33	0.67	0.25	0.56	0.67	0.67	0.166778	0.995413	-
Rv1081c	-	6	32.0	55.2	22.4	37.2	36.4	47.3	0.434	1.137	0.000	0.624	0.596	0.936	48.0	55.2	29.8	47.8	43.6	51.6	0.67	1.00	0.75	0.78	0.83	0.92	0.266586	1.000000	-
Rv1082	mca	13	134.8	140.3	138.6	128.1	157.5	159.6	-0.039	0.018	0.000	-0.109	0.179	0.197	154.6	165.9	163.8	142.8	163.8	188.6	0.87	0.85	0.85	0.90	0.96	0.85	0.922146	1.000000	-
Rv1083	-	3	34.8	32.2	30.4	34.2	46.4	48.1	0.169	0.073	0.000	0.145	0.536	0.585	34.8	38.7	45.6	34.2	46.4	48.1	1.00	0.83	0.67	1.00	1.00	1.00	0.200319	1.000000	-
Rv1084	-	19	149.0	132.7	142.5	133.0	130.5	129.0	0.062	-0.099	0.000	-0.095	-0.122	-0.138	166.5	168.0	154.7	161.4	150.3	136.2	0.89	0.79	0.92	0.82	0.87	0.95	0.577209	1.000000	-
Rv1085c	-	10	17.1	15.7	5.3	1.0	2.1	6.2	1.099	1.003	0.000	-0.787	-0.546	0.117	27.0	22.4	21.3	14.8	13.8	12.4	0.63	0.70	0.25	0.07	0.15	0.50	0.000000	0.000001	-
Rv1086	-	12	2.5	4.2	9.4	22.8	65.2	1.7	-0.938	-0.643	0.000	0.951	2.284	-1.108	13.0	16.9	28.2	32.9	78.2	10.1	0.19	0.25	0.33	0.69	0.83	0.17	0.000000	0.000000	-
Rv1087	PE_PGRS21	19	380.6	364.9	325.6	363.0	339.0	346.5	0.222	0.162	0.000	0.155	0.057	0.088	409.3	364.9	325.6	363.0	348.2	346.5	0.93	1.00	1.00	1.00	0.97	1.00	0.283170	1.000000	-
Rv1087A	-	6	171.3	161.5	198.1	183.5	170.3	187.0	-0.204	-0.287	0.000	-0.108	-0.213	-0.081	171.3	161.5	198.1	183.5	170.3	187.0	1.00	1.00	1.00	1.00	1.00	1.00	0.985350	1.000000	-
Rv1088	PE9	4	29.6	49.6	59.3	84.2	53.0	61.0	-0.895	-0.238	0.000	0.471	-0.150	0.036	50.7	49.6	95.0	126.2	60.6	81.3	0.58	1.00	0.62	0.67	0.88	0.75	0.186826	1.000000	-
Rv1089	PE10	5	56.7	93.8	83.7	114.8	108.7	142.1	-0.525	0.155	0.000	0.433	0.357	0.729	85.0	93.8	83.7	132.5	108.7	142.1	0.67	1.00	1.00	0.87	1.00	1.00	0.043790	0.434629	-
Rv1089A	celA2a	1	126.8	92.0	81.4	80.3	124.6	97.3	0.609	0.167	0.000	-0.019	0.584	0.243	126.8	92.0	81.4	80.3	124.6	97.3	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1090	celA2b	6	142.5	134.0	139.7	110.7	122.9	104.8	0.028	-0.058	0.000	-0.323	-0.178	-0.399	160.4	134.0	209.6	132.8	122.9	104.8	0.89	1.00	0.67	0.83	1.00	1.00	0.259337	1.000000	-
Rv1091	PE_PGRS22	26	192.0	195.3	212.7	192.6	191.8	185.6	-0.145	-0.120	0.000	-0.140	-0.146	-0.192	208.0	225.7	245.8	220.9	216.8	197.0	0.92	0.87	0.87	0.87	0.88	0.94	0.888865	1.000000	-
Rv1092c	coaA	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1093	glyA	12	3.0	5.1	7.3	0.8	2.9	4.7	-0.618	-0.291	0.000	-1.080	-0.633	-0.341	18.1	15.2	25.1	14.8	17.6	14.2	0.17	0.33	0.29	0.06	0.17	0.33	0.028407	0.312242	-
Rv1094	desA2	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1095	phoH2	11	89.9	87.5	98.1	95.6	82.8	89.4	-0.119	-0.157	0.000	-0.036	-0.233	-0.128	109.9	91.7	119.9	105.2	101.2	109.2	0.82	0.95	0.82	0.91	0.82	0.82	0.819332	1.000000	-
Rv1096	-	16	61.9	60.6	63.3	56.6	57.4	56.6	-0.029	-0.057	0.000	-0.149	-0.129	-0.148	78.2	77.6	81.0	82.3	73.5	75.5	0.79	0.78	0.78	0.69	0.78	0.75	0.986812	1.000000	-
Rv1097c	-	14	9.0	9.8	10.7	9.4	11.0	15.7	-0.162	-0.087	0.000	-0.126	0.029	0.396	27.1	30.4	27.2	35.8	30.8	39.9	0.33	0.32	0.39	0.26	0.36	0.39	0.706019	1.000000	-
Rv1098c	fumC	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1099c	glpX	11	134.6	141.9	157.8	143.2	167.4	134.2	-0.222	-0.148	0.000	-0.135	0.083	-0.226	164.5	148.7	192.9	175.1	193.9	155.3	0.82	0.95	0.82	0.82	0.86	0.86	0.893509	1.000000	-
Rv1100	-	9	35.7	54.4	45.3	48.2	27.8	51.1	-0.306	0.239	0.000	0.081	-0.618	0.157	56.7	65.2	81.6	68.5	35.7	65.7	0.63	0.83	0.56	0.70	0.78	0.78	0.332738	1.000000	-
Rv1101c	-	18	206.7	233.9	193.2	221.5	216.5	234.4	0.095	0.269	0.000	0.192	0.160	0.272	218.9	233.9	210.8	225.7	222.6	248.2	0.94	1.00	0.92	0.98	0.97	0.94	0.743688	1.000000	-
Rv1102c	-	7	48.8	34.9	35.8	45.4	69.1	59.8	0.397	-0.034	0.000	0.306	0.861	0.668	78.8	48.8	62.7	73.4	69.1	69.8	0.62	0.71	0.57	0.62	1.00	0.86	0.257963	1.000000	-
Rv1103c	-	6	74.8	76.5	78.1	107.9	82.7	114.6	-0.057	-0.027	0.000	0.442	0.078	0.525	79.3	83.5	93.7	114.2	90.2	114.6	0.94	0.92	0.83	0.94	0.92	1.00	0.805808	1.000000	-
Rv1104	-	9	195.7	183.2	188.3	197.5	186.8	182.7	0.054	-0.038	0.000	0.067	-0.011	-0.043	195.7	183.2	188.3	197.5	186.8	182.7	1.00	1.00	1.00	1.00	1.00	1.00	0.998877	1.000000	-
Rv1105	-	11	54.3	49.6	37.6	58.1	58.6	49.9	0.478	0.357	0.000	0.566	0.578	0.367	77.9	64.1	55.1	73.7	67.8	61.0	0.70	0.77	0.68	0.79	0.86	0.82	0.954077	1.000000	-
Rv1106c	-	17	206.9	223.2	221.8	223.1	223.5	245.5	-0.098	0.009	0.000	0.008	0.011	0.143	206.9	223.2	228.6	223.1	223.5	245.5	1.00	1.00	0.97	1.00	1.00	1.00	0.855785	1.000000	-
Rv1107c	xseB	2	43.2	53.7	56.2	41.4	28.5	77.6	-0.344	-0.060	0.000	-0.401	-0.872	0.433	43.2	53.7	56.2	41.4	28.5	77.6	1.00	1.00	1.00	1.00	1.00	1.00	0.083076	0.670997	-
Rv1108c	xseA	9	160.6	189.0	177.6	193.6	179.5	132.1	-0.142	0.087	0.000	0.121	0.015	-0.413	160.6	189.0	177.6	193.6	179.5	132.1	1.00	1.00	1.00	1.00	1.00	1.00	0.594101	1.000000	-
Rv1109c	-	6	165.2	154.9	177.0	150.7	115.7	175.4	-0.097	-0.187	0.000	-0.226	-0.593	-0.013	228.8	168.9	236.0	193.7	138.8	210.5	0.72	0.92	0.75	0.78	0.83	0.83	0.985653	1.000000	-
Rv1110	ispH	13	2.2	1.2	2.2	0.3	0.6	0.8	0.003	-0.216	0.000	-0.425	-0.366	-0.310	21.2	15.1	18.7	13.0	14.5	10.1	0.10	0.08	0.12	0.03	0.04	0.08	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1111c	-	22	72.4	67.0	79.0	85.3	76.6	67.3	-0.118	-0.222	0.000	0.105	-0.042	-0.217	125.8	122.9	133.7	144.4	140.4	123.3	0.58	0.55	0.59	0.59	0.55	0.55	0.966687	1.000000	-
Rv1112	-	8	179.9	202.6	221.4	172.0	152.9	184.2	-0.293	-0.125	0.000	-0.355	-0.520	-0.259	227.2	231.5	272.5	206.4	174.7	196.5	0.79	0.88	0.81	0.83	0.88	0.94	0.994601	1.000000	-
Rv1113	-	2	100.2	129.6	170.6	140.2	188.6	146.9	-0.740	-0.384	0.000	-0.274	0.140	-0.209	100.2	129.6	170.6	140.2	188.6	146.9	1.00	1.00	1.00	1.00	1.00	1.00	0.916555	1.000000	-
Rv1114	-	3	129.1	196.7	156.6	159.0	198.0	170.2	-0.269	0.320	0.000	0.021	0.329	0.117	145.2	196.7	156.6	159.0	198.0	170.2	0.89	1.00	1.00	1.00	1.00	1.00	0.725081	1.000000	-
Rv1115	-	13	176.6	175.1	148.5	197.2	174.6	143.2	0.243	0.230	0.000	0.397	0.226	-0.051	313.1	303.5	257.4	307.7	283.7	196.0	0.56	0.58	0.58	0.64	0.62	0.73	0.976826	1.000000	-
Rv1116	-	2	74.6	30.7	48.5	74.9	74.4	81.8	0.575	-0.582	0.000	0.579	0.571	0.699	74.6	30.7	48.5	74.9	74.4	81.8	1.00	1.00	1.00	1.00	1.00	1.00	0.303594	1.000000	-
Rv1116A	-	5	58.4	46.2	33.1	59.6	64.1	74.8	0.733	0.424	0.000	0.760	0.858	1.066	67.4	46.2	47.3	74.5	71.3	74.8	0.87	1.00	0.70	0.80	0.90	1.00	0.193073	1.000000	-
Rv1117	-	3	129.4	147.2	99.2	139.1	108.0	155.5	0.366	0.546	0.000	0.467	0.116	0.623	129.4	147.2	99.2	139.1	108.0	155.5	1.00	1.00	1.00	1.00	1.00	1.00	0.951627	1.000000	-
Rv1118c	-	10	338.6	304.6	325.0	308.5	251.3	256.2	0.058	-0.092	0.000	-0.074	-0.364	-0.337	350.3	338.5	342.1	342.8	251.3	284.7	0.97	0.90	0.95	0.90	1.00	0.90	0.732390	1.000000	-
Rv1119c	-	3	29.4	23.7	12.6	31.0	28.9	50.0	0.964	0.705	0.000	1.029	0.944	1.641	66.1	35.6	37.8	46.4	34.7	74.9	0.44	0.67	0.33	0.67	0.83	0.67	0.607860	1.000000	-
Rv1120c	-	4	136.3	67.2	123.9	88.1	103.8	118.6	0.132	-0.836	0.000	-0.469	-0.245	-0.060	233.6	89.6	123.9	88.1	118.6	158.2	0.58	0.75	1.00	1.00	0.88	0.75	0.046926	0.455165	-
Rv1121	zwf1	23	57.6	55.6	55.9	56.2	55.7	64.1	0.041	-0.006	0.000	0.006	-0.005	0.183	78.0	71.1	67.7	76.0	65.7	70.2	0.74	0.78	0.83	0.74	0.85	0.91	0.663884	1.000000	-
Rv1122	gnd2	11	5.4	0.0	4.0	0.8	0.7	0.0	0.206	-0.849	0.000	-0.639	-0.671	-0.849	17.8	0.0	17.6	25.9	14.5	0.0	0.30	0.00	0.23	0.03	0.05	0.00	0.000294	0.006815	-
Rv1123c	bpoB	7	180.6	233.1	212.1	207.6	195.9	186.2	-0.226	0.133	0.000	-0.030	-0.112	-0.183	180.6	233.1	212.1	229.4	195.9	217.2	1.00	1.00	1.00	0.90	1.00	0.86	0.383635	1.000000	-
Rv1124	ephC	12	111.0	73.2	88.8	90.6	89.5	70.6	0.305	-0.264	0.000	0.027	0.010	-0.313	153.7	117.1	125.4	130.5	119.4	94.1	0.72	0.62	0.71	0.69	0.75	0.75	0.982009	1.000000	-
Rv1125	-	21	53.2	54.3	65.1	58.5	50.9	36.4	-0.268	-0.241	0.000	-0.141	-0.325	-0.760	71.3	78.6	88.1	81.9	69.0	52.7	0.75	0.69	0.74	0.71	0.74	0.69	0.631471	1.000000	-
Rv1126c	-	8	0.0	0.0	6.7	8.2	16.9	0.0	-1.223	-1.223	0.000	0.178	0.909	-1.223	0.0	0.0	21.3	17.9	30.1	0.0	0.00	0.00	0.31	0.46	0.56	0.00	0.000000	0.000001	-
Rv1127c	ppdK	18	0.2	0.6	8.9	57.9	55.5	0.0	-1.413	-1.319	0.000	2.179	2.124	-1.474	11.6	10.2	22.9	97.7	80.0	0.0	0.02	0.06	0.39	0.59	0.69	0.00	0.000000	0.000000	-
Rv1128c	-	27	65.2	50.2	74.6	67.9	45.5	44.1	-0.182	-0.527	0.000	-0.128	-0.657	-0.698	81.2	66.2	95.9	98.1	64.6	56.7	0.80	0.76	0.78	0.69	0.70	0.78	0.011638	0.154788	-
Rv1129c	-	22	67.3	36.6	66.7	68.2	67.2	36.4	0.013	-0.786	0.000	0.029	0.010	-0.793	87.1	48.8	86.3	78.9	79.9	48.5	0.77	0.75	0.77	0.86	0.84	0.75	0.019696	0.231884	-
Rv1130	-	24	119.4	81.6	134.9	127.3	114.1	76.5	-0.170	-0.691	0.000	-0.081	-0.233	-0.780	134.3	81.6	143.9	132.8	119.0	89.5	0.89	1.00	0.94	0.96	0.96	0.85	0.001455	0.027916	-
Rv1131	gltA1	14	55.5	37.8	68.9	61.2	68.4	45.8	-0.288	-0.787	0.000	-0.158	-0.010	-0.540	68.6	48.1	87.7	77.9	79.7	51.3	0.81	0.79	0.79	0.79	0.86	0.89	0.048626	0.463773	-
Rv1132	-	25	63.7	62.9	67.9	58.2	59.5	78.2	-0.085	-0.102	0.000	-0.205	-0.175	0.192	78.3	74.8	91.7	87.3	80.4	85.0	0.81	0.84	0.74	0.67	0.74	0.92	0.117199	0.805391	-
Rv1133c	metE	31	0.0	0.2	0.0	0.0	0.0	0.0	0.000	0.046	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.02	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1134	-	4	114.8	117.2	99.4	129.9	134.7	76.2	0.199	0.227	0.000	0.370	0.420	-0.363	137.8	156.2	132.5	173.2	179.6	101.6	0.83	0.75	0.75	0.75	0.75	0.75	0.864226	1.000000	-
Rv1135c	PPE16	24	115.1	93.0	117.2	89.7	105.3	108.1	-0.024	-0.318	0.000	-0.368	-0.147	-0.111	150.7	127.5	170.4	111.4	140.4	129.7	0.76	0.73	0.69	0.81	0.75	0.83	0.757441	1.000000	-
Rv1135A	-	6	123.2	157.7	167.4	188.9	155.3	172.7	-0.428	-0.084	0.000	0.169	-0.105	0.043	138.6	189.2	200.9	226.7	186.4	207.2	0.89	0.83	0.83	0.83	0.83	0.83	0.820222	1.000000	-
Rv1136	-	2	155.8	127.3	159.4	171.7	125.4	133.9	-0.032	-0.313	0.000	0.104	-0.334	-0.243	155.8	127.3	159.4	171.7	125.4	133.9	1.00	1.00	1.00	1.00	1.00	1.00	0.674109	1.000000	-
Rv1137c	-	2	281.3	219.7	307.4	309.9	211.1	216.4	-0.126	-0.475	0.000	0.012	-0.532	-0.496	281.3	219.7	307.4	309.9	211.1	216.4	1.00	1.00	1.00	1.00	1.00	1.00	0.437437	1.000000	-
Rv1138c	-	13	172.4	171.0	176.9	188.6	140.9	181.8	-0.036	-0.048	0.000	0.090	-0.318	0.039	249.1	202.1	209.1	204.4	152.6	181.8	0.69	0.85	0.85	0.92	0.92	1.00	0.050903	0.476771	-
Rv1139c	-	9	103.6	130.7	147.0	111.4	93.3	121.0	-0.486	-0.164	0.000	-0.386	-0.629	-0.271	155.3	147.1	189.1	136.7	129.2	155.6	0.67	0.89	0.78	0.81	0.72	0.78	0.937457	1.000000	-
Rv1140	-	10	131.3	111.8	126.7	142.0	132.8	107.7	0.049	-0.173	0.000	0.159	0.065	-0.226	171.2	117.7	126.7	177.5	166.0	153.8	0.77	0.95	1.00	0.80	0.80	0.70	0.054206	0.500653	-
Rv1141c	echA11	13	266.8	243.6	213.2	220.9	210.9	214.2	0.317	0.188	0.000	0.050	-0.015	0.007	266.8	243.6	230.9	232.8	249.2	232.0	1.00	1.00	0.92	0.95	0.85	0.92	0.246940	1.000000	-
Rv1142c	echA10	7	167.4	156.0	161.2	160.4	161.7	160.5	0.052	-0.046	0.000	-0.007	0.004	-0.007	175.8	156.0	161.2	160.4	188.7	160.5	0.95	1.00	1.00	1.00	0.86	1.00	0.541740	1.000000	-
Rv1143	mcr	15	163.3	161.1	178.4	170.0	165.4	161.8	-0.124	-0.143	0.000	-0.068	-0.106	-0.136	175.0	166.6	178.4	170.0	177.2	167.4	0.93	0.97	1.00	1.00	0.93	0.97	0.702044	1.000000	-
Rv1144	-	10	276.5	227.9	258.0	235.8	248.4	241.8	0.098	-0.175	0.000	-0.127	-0.053	-0.091	276.5	227.9	258.0	235.8	248.4	241.8	1.00	1.00	1.00	1.00	1.00	1.00	0.885501	1.000000	-
Rv1145	mmpL13a	10	119.8	151.1	135.0	124.4	120.8	133.8	-0.166	0.157	0.000	-0.114	-0.154	-0.012	149.7	159.1	150.0	143.5	134.2	140.9	0.80	0.95	0.90	0.87	0.90	0.95	0.965190	1.000000	-
Rv1146	mmpL13b	21	193.7	197.8	193.8	190.2	201.8	200.4	-0.001	0.029	0.000	-0.026	0.057	0.047	230.2	213.1	208.7	214.0	211.9	221.5	0.84	0.93	0.93	0.89	0.95	0.90	0.935047	1.000000	-
Rv1147	-	9	132.3	78.2	122.6	114.5	117.0	104.1	0.106	-0.618	0.000	-0.094	-0.064	-0.226	155.3	87.9	137.9	118.9	117.0	117.1	0.85	0.89	0.89	0.96	1.00	0.89	0.562203	1.000000	-
Rv1148c	-	19	122.6	117.7	130.2	138.9	123.1	119.0	-0.083	-0.140	0.000	0.090	-0.077	-0.125	137.0	135.5	164.9	158.4	141.8	141.3	0.89	0.87	0.79	0.88	0.87	0.84	0.918183	1.000000	-
Rv1149	-	5	87.8	92.7	101.5	95.5	90.6	104.9	-0.198	-0.125	0.000	-0.084	-0.156	0.045	94.1	92.7	112.8	95.5	90.6	104.9	0.93	1.00	0.90	1.00	1.00	1.00	0.927314	1.000000	-
Rv1151c	-	9	419.5	352.7	373.6	360.7	360.2	313.7	0.165	-0.082	0.000	-0.050	-0.052	-0.248	419.5	352.7	373.6	360.7	360.2	313.7	1.00	1.00	1.00	1.00	1.00	1.00	0.875924	1.000000	-
Rv1152	-	5	95.8	79.9	87.4	110.2	92.1	115.5	0.126	-0.121	0.000	0.319	0.072	0.383	95.8	99.9	87.4	137.8	92.1	115.5	1.00	0.80	1.00	0.80	1.00	1.00	0.080148	0.656651	-
Rv1153c	omt	18	180.1	157.2	170.4	181.3	181.9	205.6	0.077	-0.113	0.000	0.086	0.091	0.264	231.5	188.7	211.6	222.5	211.2	217.7	0.78	0.83	0.81	0.81	0.86	0.94	0.904863	1.000000	-
Rv1154c	-	14	128.6	131.9	145.0	143.5	136.7	150.3	-0.168	-0.132	0.000	-0.015	-0.083	0.050	128.6	131.9	150.4	143.5	136.7	150.3	1.00	1.00	0.96	1.00	1.00	1.00	0.840708	1.000000	-
Rv1155	-	10	187.5	153.7	174.6	160.1	153.2	171.0	0.100	-0.179	0.000	-0.122	-0.183	-0.029	187.5	153.7	174.6	160.1	153.2	171.0	1.00	1.00	1.00	1.00	1.00	1.00	0.952655	1.000000	-
Rv1156	-	12	96.4	86.5	75.6	82.5	98.8	97.9	0.332	0.183	0.000	0.119	0.366	0.353	108.4	94.3	86.3	92.8	107.8	106.8	0.89	0.92	0.88	0.89	0.92	0.92	0.968369	1.000000	-
Rv1157c	-	8	118.1	214.0	132.7	265.5	249.2	128.4	-0.162	0.669	0.000	0.974	0.884	-0.046	177.1	244.6	354.0	265.5	284.8	146.8	0.67	0.88	0.38	1.00	0.88	0.88	0.001009	0.020431	-
Rv1158c	-	11	41.7	118.5	88.7	102.3	152.7	115.1	-1.003	0.399	0.000	0.196	0.752	0.359	76.5	153.4	130.1	160.8	168.0	126.7	0.55	0.77	0.68	0.64	0.91	0.91	0.025562	0.284096	-
Rv1159	pimE	25	139.9	163.7	101.2	162.6	206.3	179.4	0.449	0.668	0.000	0.658	0.993	0.796	149.9	170.5	103.3	171.8	214.9	190.9	0.93	0.96	0.98	0.95	0.96	0.94	0.000029	0.000817	-
Rv1159A	phhB	11	53.4	86.0	58.5	77.6	60.6	73.3	-0.121	0.518	0.000	0.378	0.046	0.301	73.5	105.1	99.1	116.3	74.1	115.1	0.73	0.82	0.59	0.67	0.82	0.64	0.119160	0.816923	-
Rv1160	mutT2	4	349.3	234.4	279.8	293.3	303.4	262.1	0.315	-0.250	0.000	0.067	0.115	-0.093	349.3	234.4	279.8	293.3	303.4	262.1	1.00	1.00	1.00	1.00	1.00	1.00	0.291006	1.000000	-
Rv1161	narG	66	95.3	95.1	97.0	96.4	97.0	96.5	-0.024	-0.027	0.000	-0.007	0.000	-0.006	120.9	112.1	115.3	118.6	114.3	120.2	0.79	0.85	0.84	0.81	0.85	0.80	0.919731	1.000000	-
Rv1162	narH	34	192.3	182.1	189.3	184.3	185.4	198.8	0.022	-0.055	0.000	-0.038	-0.030	0.069	213.2	190.5	198.0	195.8	200.1	211.2	0.90	0.96	0.96	0.94	0.93	0.94	0.950947	1.000000	-
Rv1163	narJ	13	248.5	242.4	263.1	220.8	220.1	219.0	-0.081	-0.116	0.000	-0.248	-0.252	-0.259	293.7	262.7	311.0	220.8	248.9	219.0	0.85	0.92	0.85	1.00	0.88	1.00	0.083398	0.672241	-
Rv1164	narI	18	324.6	248.9	251.8	273.5	240.6	238.5	0.360	-0.016	0.000	0.117	-0.064	-0.077	357.7	271.5	274.7	295.3	270.7	268.3	0.91	0.92	0.92	0.93	0.89	0.89	0.977474	1.000000	-
Rv1165	typA	15	116.0	130.6	126.7	129.0	147.2	143.7	-0.122	0.043	0.000	0.025	0.209	0.176	124.2	135.1	135.7	138.2	147.2	154.0	0.93	0.97	0.93	0.93	1.00	0.93	0.793271	1.000000	-
Rv1166	lpqW	22	0.3	0.0	0.0	0.2	0.3	0.0	0.096	0.000	0.000	0.062	0.092	0.000	22.6	0.0	0.0	14.4	14.5	0.0	0.02	0.00	0.00	0.02	0.02	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1167c	-	9	125.4	155.6	115.2	130.4	114.1	112.1	0.117	0.418	0.000	0.172	-0.013	-0.038	211.6	200.1	172.8	220.1	171.2	144.1	0.59	0.78	0.67	0.59	0.67	0.78	0.948463	1.000000	-
Rv1168c	PPE17	14	111.5	125.5	136.2	132.5	138.2	149.1	-0.278	-0.114	0.000	-0.039	0.019	0.126	120.1	135.1	158.9	150.4	148.8	160.6	0.93	0.93	0.86	0.88	0.93	0.93	0.917231	1.000000	-
Rv1169c	PE11	3	131.9	151.1	121.8	127.8	122.4	148.8	0.111	0.301	0.000	0.067	0.008	0.279	131.9	151.1	146.1	127.8	122.4	148.8	1.00	1.00	0.83	1.00	1.00	1.00	0.936699	1.000000	-
Rv1170	mshB	11	138.1	148.9	179.0	84.7	95.6	131.4	-0.363	-0.258	0.000	-1.036	-0.870	-0.432	162.7	156.0	218.8	107.5	105.2	137.7	0.85	0.95	0.82	0.79	0.91	0.95	0.257030	1.000000	-
Rv1171	-	5	330.8	228.3	305.7	291.3	294.5	309.9	0.112	-0.414	0.000	-0.068	-0.053	0.019	330.8	228.3	305.7	291.3	294.5	309.9	1.00	1.00	1.00	1.00	1.00	1.00	0.955831	1.000000	-
Rv1172c	PE12	15	114.8	123.8	136.9	130.7	131.3	123.6	-0.243	-0.139	0.000	-0.064	-0.058	-0.142	139.7	142.9	171.1	163.3	145.9	137.3	0.82	0.87	0.80	0.80	0.90	0.90	0.985708	1.000000	-
Rv1173	fbiC	38	107.1	101.0	132.5	88.0	94.5	81.6	-0.294	-0.375	0.000	-0.564	-0.466	-0.667	122.1	109.6	152.5	99.3	108.9	96.8	0.88	0.92	0.87	0.89	0.87	0.84	0.110974	0.784724	-
Rv1174c	TB8.4	7	298.1	305.9	285.2	294.9	316.9	269.6	0.063	0.100	0.000	0.047	0.150	-0.080	298.1	305.9	307.1	294.9	316.9	269.6	1.00	1.00	0.93	1.00	1.00	1.00	0.943243	1.000000	-
Rv1175c	fadH	23	181.4	181.1	189.9	175.6	189.6	168.3	-0.065	-0.067	0.000	-0.110	-0.002	-0.170	186.8	193.7	189.9	183.6	193.8	180.0	0.97	0.93	1.00	0.96	0.98	0.93	0.697328	1.000000	-
Rv1176c	-	13	208.5	205.8	229.5	232.2	201.5	180.3	-0.136	-0.154	0.000	0.017	-0.184	-0.340	232.3	222.9	248.7	244.8	218.3	213.1	0.90	0.92	0.92	0.95	0.92	0.85	0.982578	1.000000	-
Rv1177	fdxC	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1178	-	20	246.2	200.7	213.2	195.5	171.8	199.8	0.203	-0.086	0.000	-0.122	-0.304	-0.092	278.7	236.1	236.9	213.3	180.8	222.0	0.88	0.85	0.90	0.92	0.95	0.90	0.815386	1.000000	-
Rv1179c	-	37	221.7	230.1	208.7	215.8	202.8	186.8	0.086	0.138	0.000	0.047	-0.040	-0.156	251.1	243.2	234.0	239.5	217.5	200.3	0.88	0.95	0.89	0.90	0.93	0.93	0.967212	1.000000	-
Rv1180	pks3	23	76.2	56.6	60.6	58.6	57.2	70.3	0.306	-0.091	0.000	-0.045	-0.077	0.199	99.2	81.4	90.0	84.3	79.8	92.5	0.77	0.70	0.67	0.70	0.72	0.76	0.953743	1.000000	-
Rv1181	pks4	63	86.0	75.0	94.4	80.5	78.9	75.4	-0.128	-0.313	0.000	-0.216	-0.244	-0.306	105.5	90.8	115.4	102.2	98.4	84.8	0.81	0.83	0.82	0.79	0.80	0.89	0.398468	1.000000	-
Rv1182	papA3	38	57.7	58.4	69.1	58.6	53.6	47.7	-0.241	-0.226	0.000	-0.222	-0.339	-0.491	80.3	74.0	93.8	75.0	60.8	62.6	0.72	0.79	0.74	0.78	0.88	0.76	0.246942	1.000000	-
Rv1183	mmpL10	50	43.0	39.6	49.4	36.3	43.2	41.2	-0.183	-0.286	0.000	-0.398	-0.174	-0.236	69.3	53.6	70.6	55.6	50.3	50.3	0.62	0.74	0.70	0.65	0.86	0.82	0.002070	0.037537	-
Rv1184c	-	21	52.9	45.1	66.0	46.8	43.3	47.6	-0.294	-0.502	0.000	-0.455	-0.555	-0.432	66.6	61.1	79.1	53.6	49.1	57.1	0.79	0.74	0.83	0.87	0.88	0.83	0.343588	1.000000	-
Rv1185c	fadD21	28	47.5	51.4	49.1	45.2	45.5	56.1	-0.044	0.060	0.000	-0.107	-0.100	0.175	73.8	70.2	83.3	67.8	67.0	78.5	0.64	0.73	0.59	0.67	0.68	0.71	0.969555	1.000000	-
Rv1186c	-	18	70.9	67.2	80.8	73.0	72.8	71.6	-0.177	-0.248	0.000	-0.138	-0.142	-0.164	109.4	105.3	103.9	96.1	84.5	85.9	0.65	0.64	0.78	0.76	0.86	0.83	0.566456	1.000000	-
Rv1187	rocA	22	58.0	58.6	81.5	68.6	54.9	60.0	-0.456	-0.444	0.000	-0.233	-0.529	-0.413	93.4	92.0	112.0	110.4	83.3	91.0	0.62	0.64	0.73	0.62	0.66	0.66	0.899412	1.000000	-
Rv1188	-	22	54.5	54.3	54.2	59.2	63.2	64.3	0.008	0.003	0.000	0.118	0.203	0.227	85.6	95.6	74.5	102.9	92.6	91.3	0.64	0.57	0.73	0.58	0.68	0.70	0.343008	1.000000	-
Rv1189	sigI	6	115.1	90.7	76.7	82.6	79.0	81.4	0.557	0.229	0.000	0.102	0.041	0.082	138.1	108.9	83.6	87.5	79.0	88.8	0.83	0.83	0.92	0.94	1.00	0.92	0.499442	1.000000	-
Rv1190	-	9	102.8	112.6	111.6	88.9	110.0	108.2	-0.113	0.012	0.000	-0.312	-0.020	-0.042	146.1	135.1	154.5	126.4	152.3	139.1	0.70	0.83	0.72	0.70	0.72	0.78	0.998811	1.000000	-
Rv1191	-	8	163.6	120.1	126.2	162.2	152.4	124.0	0.361	-0.069	0.000	0.349	0.262	-0.024	196.3	137.3	155.4	185.4	174.2	141.8	0.83	0.88	0.81	0.88	0.88	0.88	0.992380	1.000000	-
Rv1192	-	13	76.1	76.2	76.8	64.1	66.6	79.0	-0.013	-0.010	0.000	-0.244	-0.193	0.039	106.0	110.1	124.8	89.2	91.1	102.7	0.72	0.69	0.62	0.72	0.73	0.77	0.980411	1.000000	-
Rv1193	fadD36	18	49.6	44.9	54.3	44.0	37.6	37.8	-0.121	-0.249	0.000	-0.277	-0.479	-0.472	70.4	64.7	78.2	55.2	52.0	50.4	0.70	0.69	0.69	0.80	0.72	0.75	0.711887	1.000000	-
Rv1194c	-	16	59.4	59.0	58.1	20.9	18.3	46.2	0.029	0.020	0.000	-1.284	-1.438	-0.302	69.5	62.9	80.8	29.5	23.4	49.3	0.85	0.94	0.72	0.71	0.78	0.94	0.000000	0.000000	-
Rv1195	PE13	5	221.0	171.0	209.2	126.3	103.9	132.2	0.077	-0.283	0.000	-0.706	-0.976	-0.643	221.0	171.0	209.2	126.3	103.9	132.2	1.00	1.00	1.00	1.00	1.00	1.00	0.500218	1.000000	-
Rv1196	PPE18	7	26.1	24.8	23.7	22.5	11.0	24.5	0.119	0.054	0.000	-0.061	-0.845	0.041	61.0	38.5	66.3	39.4	19.2	42.9	0.43	0.64	0.36	0.57	0.57	0.57	0.143099	0.923893	-
Rv1197	esxK	2	183.0	203.7	199.2	126.9	146.2	161.9	-0.119	0.031	0.000	-0.631	-0.434	-0.291	183.0	203.7	199.2	126.9	146.2	161.9	1.00	1.00	1.00	1.00	1.00	1.00	0.891258	1.000000	-
Rv1198	esxL	3	173.8	205.1	121.2	157.0	200.1	246.7	0.503	0.736	0.000	0.360	0.700	0.996	173.8	205.1	121.2	157.0	200.1	246.7	1.00	1.00	1.00	1.00	1.00	1.00	0.024056	0.271165	-
Rv1199c	-	15	241.5	252.2	268.8	266.2	222.7	244.8	-0.151	-0.090	0.000	-0.014	-0.266	-0.132	258.8	270.2	288.0	266.2	222.7	244.8	0.93	0.93	0.93	1.00	1.00	1.00	0.457235	1.000000	-
Rv1200	-	24	182.0	186.3	166.6	189.1	188.7	177.0	0.124	0.157	0.000	0.178	0.175	0.085	189.9	198.7	181.8	194.5	201.3	184.7	0.96	0.94	0.92	0.97	0.94	0.96	0.956680	1.000000	-
Rv1201c	-	10	0.0	0.0	0.6	0.0	0.7	0.0	-0.171	-0.171	0.000	-0.171	0.024	-0.171	0.0	0.0	12.6	0.0	14.5	0.0	0.00	0.00	0.05	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1202	dapE	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1203c	-	6	71.4	58.0	70.2	58.1	48.3	81.9	0.022	-0.257	0.000	-0.254	-0.499	0.208	75.6	58.0	76.6	65.4	52.6	81.9	0.94	1.00	0.92	0.89	0.92	1.00	0.800476	1.000000	-
Rv1204c	-	16	370.2	331.6	349.6	317.7	356.4	308.6	0.082	-0.075	0.000	-0.136	0.028	-0.177	378.1	353.7	349.6	317.7	356.4	308.6	0.98	0.94	1.00	1.00	1.00	1.00	0.601340	1.000000	-
Rv1205	-	12	143.9	129.1	153.6	165.7	151.3	160.4	-0.091	-0.242	0.000	0.107	-0.021	0.060	152.3	163.1	184.3	180.8	157.8	160.4	0.94	0.79	0.83	0.92	0.96	1.00	0.343259	1.000000	-
Rv1206	fadD6	29	131.9	125.2	106.9	95.8	117.5	126.7	0.292	0.219	0.000	-0.150	0.131	0.236	157.2	148.2	126.5	120.8	133.7	138.7	0.84	0.84	0.84	0.79	0.88	0.91	0.771919	1.000000	-
Rv1207	folP2	10	116.3	142.8	127.0	154.5	156.2	143.8	-0.122	0.163	0.000	0.273	0.288	0.172	139.6	178.5	133.7	185.4	164.5	159.8	0.83	0.80	0.95	0.83	0.95	0.90	0.696390	1.000000	-
Rv1208	-	12	23.8	19.0	23.8	29.2	46.9	8.5	0.001	-0.261	0.000	0.252	0.852	-1.092	47.5	32.6	40.7	43.9	56.3	15.7	0.50	0.58	0.58	0.67	0.83	0.54	0.000295	0.006815	-
Rv1209	-	3	218.4	168.4	194.6	183.4	196.3	227.2	0.162	-0.203	0.000	-0.083	0.013	0.218	218.4	168.4	194.6	183.4	196.3	227.2	1.00	1.00	1.00	1.00	1.00	1.00	0.757041	1.000000	-
Rv1210	tagA	11	203.7	238.0	210.5	187.7	177.7	234.5	-0.046	0.173	0.000	-0.161	-0.238	0.152	203.7	238.0	210.5	187.7	177.7	234.5	1.00	1.00	1.00	1.00	1.00	1.00	0.679076	1.000000	-
Rv1211	-	2	2.7	2.6	0.0	7.0	0.0	0.0	0.629	0.604	0.000	1.267	0.000	0.000	16.4	10.4	0.0	14.1	0.0	0.0	0.17	0.25	0.00	0.50	0.00	0.00	0.375560	1.000000	-
Rv1212c	-	27	128.5	127.6	144.3	109.0	101.9	104.9	-0.161	-0.171	0.000	-0.389	-0.482	-0.441	144.6	137.8	169.4	114.7	127.9	118.1	0.89	0.93	0.85	0.95	0.80	0.89	0.094117	0.716656	-
Rv1213	glgC	27	138.2	142.4	118.5	155.8	160.2	147.3	0.214	0.256	0.000	0.381	0.420	0.303	157.7	150.8	133.3	168.3	166.4	162.3	0.88	0.94	0.89	0.93	0.96	0.91	0.680859	1.000000	-
Rv1214c	PE14	5	306.3	205.1	211.3	266.7	213.2	225.0	0.525	-0.042	0.000	0.329	0.013	0.089	306.3	205.1	211.3	266.7	213.2	225.0	1.00	1.00	1.00	1.00	1.00	1.00	0.437411	1.000000	-
Rv1215c	-	22	175.6	179.1	165.8	160.7	171.3	193.1	0.081	0.108	0.000	-0.043	0.046	0.214	187.0	202.0	202.6	189.4	171.3	207.2	0.94	0.89	0.82	0.85	1.00	0.93	0.114913	0.798787	-
Rv1216c	-	15	78.4	82.1	64.2	70.7	72.1	87.0	0.271	0.332	0.000	0.131	0.157	0.412	90.5	91.2	83.7	81.6	77.3	93.2	0.87	0.90	0.77	0.87	0.93	0.93	0.903662	1.000000	-
Rv1217c	-	18	88.8	80.1	76.4	87.5	91.4	84.4	0.205	0.064	0.000	0.185	0.244	0.135	90.5	80.1	86.0	90.9	94.0	94.9	0.98	1.00	0.89	0.96	0.97	0.89	0.254586	1.000000	-
Rv1218c	-	5	97.2	74.5	116.9	103.4	136.4	117.3	-0.254	-0.616	0.000	-0.169	0.214	0.005	112.1	74.5	116.9	103.4	136.4	117.3	0.87	1.00	1.00	1.00	1.00	1.00	0.525985	1.000000	-
Rv1219c	-	10	154.0	154.3	199.7	131.7	159.0	136.4	-0.364	-0.362	0.000	-0.583	-0.320	-0.534	177.7	192.8	210.3	131.7	176.7	136.4	0.87	0.80	0.95	1.00	0.90	1.00	0.047573	0.456289	-
Rv1220c	-	10	220.0	259.7	244.9	214.0	256.0	227.2	-0.152	0.083	0.000	-0.190	0.063	-0.106	253.8	288.5	272.1	214.0	284.5	252.5	0.87	0.90	0.90	1.00	0.90	0.90	0.572494	1.000000	-
Rv1221	sigE	16	20.2	26.3	21.5	15.5	22.7	26.6	-0.075	0.241	0.000	-0.373	0.062	0.253	60.5	49.6	57.3	43.7	48.4	53.2	0.33	0.53	0.38	0.35	0.47	0.50	0.912045	1.000000	-
Rv1222	-	2	118.1	158.0	151.4	213.0	233.7	152.4	-0.345	0.059	0.000	0.479	0.610	0.009	118.1	158.0	151.4	213.0	233.7	152.4	1.00	1.00	1.00	1.00	1.00	1.00	0.109828	0.784724	-
Rv1223	htrA	17	0.0	0.3	0.0	0.0	0.0	0.0	0.000	0.082	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.03	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1224	tatB	5	2.6	3.0	0.0	0.9	2.4	3.0	0.604	0.685	0.000	0.231	0.556	0.671	19.5	10.1	0.0	13.0	11.8	14.8	0.13	0.30	0.00	0.07	0.20	0.20	0.737248	1.000000	-
Rv1225c	-	6	173.1	182.6	177.7	160.6	220.2	135.6	-0.037	0.038	0.000	-0.141	0.302	-0.377	194.7	182.6	177.7	160.6	220.2	135.6	0.89	1.00	1.00	1.00	1.00	1.00	0.622542	1.000000	-
Rv1226c	-	15	297.6	280.0	290.2	271.8	258.5	222.2	0.036	-0.051	0.000	-0.093	-0.164	-0.378	326.6	289.7	311.0	271.8	258.5	229.8	0.91	0.97	0.93	1.00	1.00	0.97	0.572765	1.000000	-
Rv1227c	-	6	165.3	224.5	179.5	162.5	164.4	182.1	-0.115	0.315	0.000	-0.139	-0.123	0.020	198.4	224.5	215.4	195.1	197.2	218.5	0.83	1.00	0.83	0.83	0.83	0.83	0.905970	1.000000	-
Rv1228	lpqX	8	157.8	179.8	190.8	187.1	191.6	216.0	-0.266	-0.084	0.000	-0.028	0.005	0.175	157.8	179.8	190.8	187.1	191.6	216.0	1.00	1.00	1.00	1.00	1.00	1.00	0.867158	1.000000	-
Rv1229c	mrp	14	0.0	0.0	0.4	0.0	0.0	0.0	-0.124	-0.124	0.000	-0.124	-0.124	-0.124	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.04	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1230c	-	20	182.8	198.8	220.6	198.2	197.3	193.9	-0.264	-0.147	0.000	-0.151	-0.157	-0.182	192.5	209.3	252.1	208.6	207.7	204.1	0.95	0.95	0.88	0.95	0.95	0.95	0.927074	1.000000	-
Rv1231c	-	7	155.1	125.8	166.6	165.8	164.3	138.4	-0.100	-0.391	0.000	-0.007	-0.019	-0.258	171.4	125.8	194.3	165.8	164.3	138.4	0.90	1.00	0.86	1.00	1.00	1.00	0.515497	1.000000	-
Rv1232c	-	8	147.6	123.8	124.9	131.5	125.5	125.7	0.232	-0.012	0.000	0.072	0.007	0.009	147.6	141.5	142.7	131.5	125.5	125.7	1.00	0.88	0.88	1.00	1.00	1.00	0.427598	1.000000	-
Rv1233c	-	17	148.3	144.7	139.9	133.7	134.5	167.2	0.082	0.048	0.000	-0.063	-0.055	0.250	171.9	182.2	158.5	154.9	147.5	183.4	0.86	0.79	0.88	0.86	0.91	0.91	0.878896	1.000000	-
Rv1234	-	8	32.3	48.8	32.1	39.8	45.9	57.1	0.011	0.538	0.000	0.274	0.458	0.745	43.1	55.8	42.7	50.3	52.5	65.2	0.75	0.88	0.75	0.79	0.88	0.88	0.641406	1.000000	-
Rv1235	lpqY	28	69.7	56.7	61.2	66.7	66.5	81.5	0.173	-0.103	0.000	0.115	0.110	0.385	106.4	75.6	95.3	87.6	84.6	99.2	0.65	0.75	0.64	0.76	0.79	0.82	0.588102	1.000000	-
Rv1236	sugA	18	128.7	126.6	139.5	143.8	136.2	144.8	-0.112	-0.136	0.000	0.042	-0.033	0.051	136.3	142.4	162.1	152.3	136.2	148.9	0.94	0.89	0.86	0.94	1.00	0.97	0.475714	1.000000	-
Rv1237	sugB	11	45.4	60.9	39.3	60.0	45.9	57.7	0.187	0.574	0.000	0.553	0.203	0.502	59.9	63.8	57.6	70.7	48.1	60.4	0.76	0.95	0.68	0.85	0.95	0.95	0.218676	1.000000	-
Rv1238	sugC	24	49.9	46.8	52.5	50.9	58.9	55.1	-0.067	-0.151	0.000	-0.039	0.152	0.065	66.5	66.0	68.1	61.1	70.6	69.6	0.75	0.71	0.77	0.83	0.83	0.79	0.859039	1.000000	-
Rv1239c	corA	23	133.5	128.7	104.1	97.1	96.4	121.1	0.344	0.293	0.000	-0.095	-0.105	0.209	167.5	148.0	129.4	119.7	123.2	142.8	0.80	0.87	0.80	0.81	0.78	0.85	0.876015	1.000000	-
Rv1240	mdh	3	0.0	1.7	4.2	0.0	0.0	0.0	-0.880	-0.450	0.000	-0.880	-0.880	-0.880	0.0	10.4	12.6	0.0	0.0	0.0	0.00	0.17	0.33	0.00	0.00	0.00	0.195238	1.000000	-
Rv1241	-	1	147.3	376.0	283.8	102.9	187.6	186.4	-0.923	0.400	0.000	-1.421	-0.585	-0.594	147.3	376.0	283.8	102.9	187.6	186.4	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1242	-	9	277.8	295.7	342.0	235.3	299.1	267.1	-0.295	-0.207	0.000	-0.530	-0.190	-0.351	277.8	295.7	342.0	264.8	299.1	282.8	1.00	1.00	1.00	0.89	1.00	0.94	0.309245	1.000000	-
Rv1243c	PE_PGRS23	15	266.4	248.0	235.6	278.8	243.5	221.6	0.174	0.073	0.000	0.238	0.046	-0.086	278.8	286.2	271.8	298.8	280.9	277.0	0.96	0.87	0.87	0.93	0.87	0.80	0.597453	1.000000	-
Rv1244	lpqZ	8	102.7	134.0	84.9	116.9	100.9	74.0	0.261	0.628	0.000	0.439	0.236	-0.187	107.2	134.0	90.6	116.9	100.9	74.0	0.96	1.00	0.94	1.00	1.00	1.00	0.420332	1.000000	-
Rv1245c	-	13	103.6	95.0	107.3	96.2	108.0	92.9	-0.048	-0.167	0.000	-0.151	0.009	-0.197	126.3	117.6	139.5	107.2	127.6	105.1	0.82	0.81	0.77	0.90	0.85	0.88	0.953612	1.000000	-
Rv1246c	-	7	143.1	138.0	131.3	159.7	144.4	159.0	0.120	0.069	0.000	0.273	0.132	0.267	143.1	138.0	131.3	159.7	144.4	159.0	1.00	1.00	1.00	1.00	1.00	1.00	0.980802	1.000000	-
Rv1247c	-	4	44.9	87.3	66.4	51.2	69.9	63.5	-0.515	0.371	0.000	-0.346	0.070	-0.060	59.9	87.3	75.9	55.8	93.2	63.5	0.75	1.00	0.88	0.92	0.75	1.00	0.294585	1.000000	-
Rv1248c	kgd	41	9.3	8.1	8.0	1.6	1.7	7.5	0.145	0.011	0.000	-0.972	-0.951	-0.057	22.5	18.3	24.2	15.2	14.0	13.9	0.41	0.44	0.33	0.11	0.12	0.54	0.000000	0.000000	-
Rv1249c	-	11	248.9	213.1	237.4	246.7	211.0	195.3	0.067	-0.152	0.000	0.055	-0.166	-0.275	248.9	213.1	248.7	246.7	211.0	195.3	1.00	1.00	0.95	1.00	1.00	1.00	0.910376	1.000000	-
Rv1250	-	26	99.5	108.8	84.3	96.8	100.3	118.2	0.227	0.350	0.000	0.189	0.238	0.465	109.3	117.8	89.4	100.7	110.9	122.9	0.91	0.92	0.94	0.96	0.90	0.96	0.341797	1.000000	-
Rv1251c	-	53	118.9	124.0	111.0	125.6	114.3	101.5	0.095	0.153	0.000	0.172	0.041	-0.123	126.0	141.3	135.2	146.9	137.7	128.0	0.94	0.88	0.82	0.86	0.83	0.79	0.001126	0.022133	-
Rv1252c	lprE	7	215.6	213.5	186.7	201.7	193.0	221.1	0.203	0.189	0.000	0.109	0.047	0.238	215.6	213.5	201.1	201.7	193.0	221.1	1.00	1.00	0.93	1.00	1.00	1.00	0.944452	1.000000	-
Rv1253	deaD	32	134.4	138.6	139.9	155.2	137.8	120.7	-0.056	-0.013	0.000	0.145	-0.021	-0.205	169.7	170.5	172.1	169.3	144.6	148.5	0.79	0.81	0.81	0.92	0.95	0.81	0.152519	0.952346	-
Rv1254	-	26	3.7	7.3	1.9	2.5	7.1	5.4	0.338	0.825	0.000	0.121	0.809	0.591	19.5	18.0	33.2	15.1	24.7	14.8	0.19	0.40	0.06	0.17	0.29	0.37	0.000025	0.000732	-
Rv1255c	-	8	106.0	117.2	145.9	106.2	114.8	84.2	-0.443	-0.304	0.000	-0.440	-0.332	-0.758	121.1	117.2	166.7	127.4	141.3	89.8	0.88	1.00	0.88	0.83	0.81	0.94	0.474452	1.000000	-
Rv1256c	cyp130	14	231.4	253.0	281.7	250.6	263.8	230.3	-0.279	-0.152	0.000	-0.166	-0.093	-0.285	242.9	262.4	315.5	256.7	284.1	268.7	0.95	0.96	0.89	0.98	0.93	0.86	0.673507	1.000000	-
Rv1257c	-	15	121.5	108.6	114.2	133.5	89.8	114.3	0.087	-0.069	0.000	0.217	-0.330	0.002	188.6	155.1	155.7	182.0	112.3	122.5	0.64	0.70	0.73	0.73	0.80	0.93	0.314385	1.000000	-
Rv1258c	-	21	207.8	205.8	204.7	219.0	204.4	220.5	0.021	0.008	0.000	0.095	-0.002	0.105	218.2	227.5	226.2	237.9	220.1	231.5	0.95	0.90	0.90	0.92	0.93	0.95	0.985200	1.000000	-
Rv1259	-	11	93.8	84.0	63.5	81.9	78.9	84.3	0.527	0.376	0.000	0.342	0.292	0.381	119.0	102.6	77.7	100.0	96.4	103.0	0.79	0.82	0.82	0.82	0.82	0.82	0.924065	1.000000	-
Rv1260	-	24	76.2	54.5	57.8	53.9	61.7	55.6	0.371	-0.076	0.000	-0.092	0.087	-0.051	91.4	68.9	74.9	73.2	80.0	70.2	0.83	0.79	0.77	0.74	0.77	0.79	0.671537	1.000000	-
Rv1261c	-	10	117.0	106.1	133.9	123.7	102.8	114.1	-0.187	-0.323	0.000	-0.111	-0.365	-0.222	121.0	106.1	141.0	123.7	102.8	114.1	0.97	1.00	0.95	1.00	1.00	1.00	0.873432	1.000000	-
Rv1262c	-	4	67.5	94.7	71.8	77.0	91.1	62.8	-0.083	0.377	0.000	0.094	0.322	-0.181	73.7	94.7	95.8	84.0	91.1	71.7	0.92	1.00	0.75	0.92	1.00	0.88	0.855848	1.000000	-
Rv1263	amiB2	21	121.2	97.5	95.6	98.3	107.9	79.3	0.327	0.026	0.000	0.038	0.166	-0.256	141.4	99.8	108.5	110.6	125.9	95.1	0.86	0.98	0.88	0.89	0.86	0.83	0.249906	1.000000	-
Rv1264	-	13	244.2	232.6	202.6	219.5	222.7	260.0	0.263	0.194	0.000	0.113	0.133	0.352	288.6	318.2	263.4	285.4	275.8	355.8	0.85	0.73	0.77	0.77	0.81	0.73	0.831694	1.000000	-
Rv1265	-	11	13.5	12.1	12.8	14.9	14.6	11.4	0.056	-0.058	0.000	0.165	0.141	-0.116	24.7	24.1	31.2	30.8	26.8	19.3	0.55	0.50	0.41	0.48	0.55	0.59	0.763596	1.000000	-
Rv1266c	pknH	26	145.9	161.9	155.9	161.1	160.5	150.0	-0.093	0.053	0.000	0.046	0.041	-0.054	151.7	161.9	155.9	167.5	160.5	150.0	0.96	1.00	1.00	0.96	1.00	1.00	0.328362	1.000000	-
Rv1267c	embR	19	164.6	187.7	180.3	176.6	175.6	178.0	-0.128	0.056	0.000	-0.030	-0.037	-0.018	177.1	209.7	201.5	186.4	190.6	187.9	0.93	0.89	0.89	0.95	0.92	0.95	0.969666	1.000000	-
Rv1268c	-	11	191.0	167.8	174.8	171.9	192.8	164.1	0.125	-0.057	0.000	-0.023	0.138	-0.088	242.4	205.1	213.6	210.1	249.5	212.4	0.79	0.82	0.82	0.82	0.77	0.77	0.999344	1.000000	-
Rv1269c	-	7	96.2	102.6	94.5	98.3	96.4	98.8	0.024	0.113	0.000	0.053	0.027	0.060	126.3	102.6	110.3	108.6	103.8	106.4	0.76	1.00	0.86	0.90	0.93	0.93	0.831532	1.000000	-
Rv1270c	lprA	10	101.5	81.6	78.6	87.6	81.5	110.9	0.349	0.051	0.000	0.148	0.049	0.471	117.1	90.6	98.2	101.1	101.8	116.7	0.87	0.90	0.80	0.87	0.80	0.95	0.949847	1.000000	-
Rv1271c	-	4	34.9	23.2	36.0	37.9	32.0	20.1	-0.041	-0.538	0.000	0.065	-0.147	-0.710	46.5	26.6	57.6	50.5	36.6	20.1	0.75	0.88	0.62	0.75	0.88	1.00	0.239888	1.000000	-
Rv1272c	-	28	39.0	46.2	41.8	61.1	58.4	54.0	-0.087	0.129	0.000	0.497	0.437	0.335	68.3	78.4	73.2	93.3	81.7	81.8	0.57	0.59	0.57	0.65	0.71	0.66	0.807608	1.000000	-
Rv1273c	-	29	90.2	102.7	78.2	110.6	119.8	72.6	0.194	0.373	0.000	0.475	0.586	-0.100	115.3	124.1	103.0	131.8	139.0	91.5	0.78	0.83	0.76	0.84	0.86	0.79	0.331552	1.000000	-
Rv1274	lprB	3	8.3	16.9	7.3	12.8	13.2	5.2	0.116	0.838	0.000	0.541	0.572	-0.268	18.7	25.4	21.8	19.3	19.9	15.6	0.44	0.67	0.33	0.67	0.67	0.33	0.760949	1.000000	-
Rv1275	lprC	6	7.0	21.2	9.4	14.9	27.2	9.2	-0.265	0.869	0.000	0.468	1.166	-0.016	17.9	25.5	22.5	24.3	36.3	15.8	0.39	0.83	0.42	0.61	0.75	0.58	0.034716	0.364513	-
Rv1276c	-	6	70.5	71.4	77.1	57.1	95.1	73.4	-0.120	-0.104	0.000	-0.404	0.286	-0.068	84.7	71.4	92.5	114.2	114.2	88.0	0.83	1.00	0.83	0.50	0.83	0.83	0.063510	0.556273	-
Rv1277	-	19	111.3	126.2	115.1	104.6	109.2	107.5	-0.047	0.127	0.000	-0.132	-0.072	-0.094	117.4	133.2	118.2	110.4	109.2	113.5	0.95	0.95	0.97	0.95	1.00	0.95	0.856506	1.000000	-
Rv1278	-	24	115.7	117.8	121.5	134.0	128.9	116.5	-0.068	-0.043	0.000	0.137	0.082	-0.057	151.4	166.3	161.9	175.5	162.8	159.8	0.76	0.71	0.75	0.76	0.79	0.73	0.967923	1.000000	-
Rv1279	-	25	124.4	106.1	116.3	125.2	121.9	117.2	0.093	-0.127	0.000	0.102	0.064	0.010	137.2	112.9	123.8	134.2	129.6	124.6	0.91	0.94	0.94	0.93	0.94	0.94	0.997162	1.000000	-
Rv1280c	oppA	25	101.7	115.2	124.1	145.9	139.1	92.9	-0.275	-0.103	0.000	0.225	0.159	-0.399	119.1	144.0	144.3	168.3	154.5	100.9	0.85	0.80	0.86	0.87	0.90	0.92	0.065307	0.570182	-
Rv1281c	oppD	25	50.7	61.2	59.0	65.2	58.1	45.1	-0.201	0.050	0.000	0.132	-0.021	-0.353	80.9	92.8	92.2	99.7	80.7	70.5	0.63	0.66	0.64	0.65	0.72	0.64	0.857514	1.000000	-
Rv1282c	oppC	15	53.8	64.1	77.8	82.5	87.7	70.5	-0.493	-0.260	0.000	0.080	0.163	-0.133	75.7	71.3	89.8	88.4	97.4	70.5	0.71	0.90	0.87	0.93	0.90	1.00	0.033908	0.358864	-
Rv1283c	oppB	17	59.5	103.3	75.0	105.3	73.0	51.4	-0.310	0.437	0.000	0.464	-0.036	-0.503	77.8	117.1	98.1	122.1	88.7	72.9	0.76	0.88	0.76	0.86	0.82	0.71	0.047510	0.456289	-
Rv1284	-	4	18.4	3.8	24.1	25.7	56.6	30.6	-0.312	-1.725	0.000	0.080	1.083	0.291	55.3	10.1	64.2	61.8	75.5	48.9	0.33	0.38	0.38	0.42	0.75	0.62	0.355584	1.000000	-
Rv1285	cysD	9	66.7	79.0	65.4	67.4	48.2	62.7	0.026	0.254	0.000	0.040	-0.405	-0.058	90.1	88.9	73.6	70.0	54.3	70.5	0.74	0.89	0.89	0.96	0.89	0.89	0.491026	1.000000	-
Rv1286	cysN	27	56.9	39.6	58.7	34.1	37.5	44.1	-0.042	-0.513	0.000	-0.704	-0.586	-0.375	82.3	57.9	88.1	55.3	56.2	56.7	0.69	0.69	0.67	0.62	0.67	0.78	0.116727	0.804388	-
Rv1287	-	10	124.2	133.4	193.5	178.4	193.8	171.8	-0.619	-0.520	0.000	-0.114	0.003	-0.167	133.1	148.2	215.0	223.0	215.4	229.0	0.93	0.90	0.90	0.80	0.90	0.75	0.017159	0.210263	-
Rv1288	-	32	121.2	115.0	117.9	120.8	125.3	129.2	0.038	-0.035	0.000	0.034	0.084	0.126	133.8	124.7	137.2	130.4	133.7	135.5	0.91	0.92	0.86	0.93	0.94	0.95	0.966161	1.000000	-
Rv1289	-	10	106.8	81.9	81.8	102.4	118.3	104.8	0.364	0.001	0.000	0.307	0.506	0.339	110.5	81.9	90.9	109.7	118.3	104.8	0.97	1.00	0.90	0.93	1.00	1.00	0.552374	1.000000	-
Rv1290c	-	32	210.8	222.9	204.0	215.7	217.2	201.8	0.046	0.125	0.000	0.079	0.089	-0.015	232.6	237.7	221.2	232.7	231.7	211.7	0.91	0.94	0.92	0.93	0.94	0.95	0.998840	1.000000	-
Rv1290A	-	7	19.3	26.8	20.2	28.7	30.6	37.3	-0.049	0.337	0.000	0.423	0.500	0.748	36.9	53.6	47.0	67.0	47.6	43.5	0.52	0.50	0.43	0.43	0.64	0.86	0.310405	1.000000	-
Rv1291c	-	2	97.1	201.8	246.3	211.9	171.4	143.9	-1.299	-0.281	0.000	-0.212	-0.511	-0.755	97.1	201.8	246.3	211.9	171.4	143.9	1.00	1.00	1.00	1.00	1.00	1.00	0.023179	0.264834	-
Rv1292	argS	33	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1293	lysA	24	0.5	1.9	0.6	3.3	3.1	1.7	-0.027	0.287	0.000	0.554	0.524	0.250	19.5	11.3	31.0	21.5	18.7	16.5	0.03	0.17	0.02	0.15	0.17	0.10	0.004904	0.077336	-
Rv1294	thrA	20	0.2	0.0	0.0	0.0	0.0	0.0	0.055	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.02	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1295	thrC	18	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1296	thrB	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1297	rho	17	1.5	0.0	0.4	1.1	0.4	1.5	0.285	-0.103	0.000	0.186	0.015	0.268	26.2	0.0	12.6	18.9	14.5	25.0	0.06	0.00	0.03	0.06	0.03	0.06	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1298	rpmE	6	4.0	3.4	2.1	2.3	4.8	0.9	0.346	0.243	0.000	0.033	0.467	-0.267	14.5	10.2	12.6	13.6	28.9	10.8	0.28	0.33	0.17	0.17	0.17	0.08	0.001650	0.030763	-
Rv1299	prfA	14	0.0	0.0	0.4	0.0	0.0	0.0	-0.124	-0.124	0.000	-0.124	-0.124	-0.124	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.04	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1300	hemK	14	18.5	18.9	10.5	8.7	6.6	19.4	0.603	0.625	0.000	-0.173	-0.420	0.657	27.8	26.4	22.6	19.3	20.5	27.2	0.67	0.71	0.46	0.45	0.32	0.71	0.003479	0.058319	-
Rv1301	-	9	10.4	11.8	11.1	4.7	5.6	10.6	-0.068	0.058	0.000	-0.732	-0.606	-0.054	28.1	23.6	25.1	21.3	20.2	17.3	0.37	0.50	0.44	0.22	0.28	0.61	0.233899	1.000000	-
Rv1302	rfe	16	0.0	0.3	0.0	0.0	0.0	0.0	0.000	0.087	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.03	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1303	-	4	124.1	88.9	80.6	70.1	79.9	68.7	0.594	0.135	0.000	-0.189	-0.011	-0.216	496.6	355.8	322.3	280.3	319.6	274.7	0.25	0.25	0.25	0.25	0.25	0.25	0.485212	1.000000	-
Rv1304	atpB	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1305	atpE	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1306	atpF	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1307	atpH	15	0.0	0.0	0.0	0.0	0.0	0.4	0.000	0.000	0.000	0.000	0.000	0.100	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1308	atpA	21	0.0	0.0	0.0	0.0	0.0	0.3	0.000	0.000	0.000	0.000	0.000	0.072	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1309	atpG	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1310	atpD	18	0.0	0.0	0.0	0.3	0.0	0.3	0.000	0.000	0.000	0.075	0.000	0.073	0.0	0.0	0.0	14.4	0.0	9.4	0.00	0.00	0.00	0.02	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1311	atpC	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1312	-	8	55.6	70.7	66.7	91.7	134.7	55.7	-0.241	0.080	0.000	0.433	0.963	-0.240	63.6	80.8	76.2	104.8	153.9	63.6	0.88	0.88	0.88	0.88	0.88	0.88	0.000078	0.002057	-
Rv1313c	-	15	261.5	251.6	232.8	243.5	219.8	226.9	0.164	0.110	0.000	0.064	-0.081	-0.036	301.7	279.5	268.6	249.1	253.6	234.7	0.87	0.90	0.87	0.98	0.87	0.97	0.712741	1.000000	-
Rv1314c	-	12	106.0	83.7	93.3	98.2	89.1	91.7	0.175	-0.148	0.000	0.070	-0.063	-0.024	127.2	87.3	111.9	114.0	101.8	95.7	0.83	0.96	0.83	0.86	0.88	0.96	0.800199	1.000000	-
Rv1315	murA	13	0.3	0.0	0.0	0.0	0.0	0.0	0.083	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.03	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rvnr01	rrs	58	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1316c	ogt	7	120.6	136.6	101.9	124.1	148.4	159.9	0.232	0.405	0.000	0.272	0.521	0.625	168.9	159.4	129.7	124.1	148.4	159.9	0.71	0.86	0.79	1.00	1.00	1.00	0.061771	0.548919	-
Rv1317c	alkA	10	212.8	146.7	180.7	173.7	157.4	166.9	0.230	-0.292	0.000	-0.055	-0.193	-0.111	212.8	146.7	180.7	193.0	157.4	166.9	1.00	1.00	1.00	0.90	1.00	1.00	0.227256	1.000000	-
Rv1318c	-	17	208.5	215.2	193.8	214.4	209.7	195.9	0.103	0.147	0.000	0.142	0.111	0.015	231.2	215.2	212.6	227.8	237.6	195.9	0.90	1.00	0.91	0.94	0.88	1.00	0.320754	1.000000	-
Rv1319c	-	28	153.3	148.8	145.3	154.8	162.8	165.3	0.075	0.033	0.000	0.089	0.159	0.181	171.7	160.2	173.1	168.9	175.3	181.5	0.89	0.93	0.84	0.92	0.93	0.91	0.956102	1.000000	-
Rv1320c	-	27	149.9	169.5	149.5	156.2	162.0	160.0	0.004	0.176	0.000	0.061	0.112	0.095	155.7	176.0	164.7	162.2	168.2	172.8	0.96	0.96	0.91	0.96	0.96	0.93	0.809916	1.000000	-
Rv1321	-	9	197.1	174.7	184.9	187.7	191.1	176.6	0.090	-0.079	0.000	0.021	0.046	-0.065	197.1	174.7	184.9	187.7	191.1	176.6	1.00	1.00	1.00	1.00	1.00	1.00	0.996921	1.000000	-
Rv1322	-	5	214.4	256.4	264.8	228.6	223.6	220.2	-0.299	-0.046	0.000	-0.208	-0.239	-0.260	229.7	256.4	294.2	228.6	223.6	275.3	0.93	1.00	0.90	1.00	1.00	0.80	0.698317	1.000000	-
Rv1322A	-	6	89.0	73.9	84.4	89.8	83.1	77.4	0.072	-0.179	0.000	0.085	-0.021	-0.117	94.2	73.9	92.1	89.8	83.1	77.4	0.94	1.00	0.92	1.00	1.00	1.00	0.923783	1.000000	-
Rv1323	fadA4	12	158.1	142.6	157.0	145.7	131.2	132.2	0.009	-0.135	0.000	-0.104	-0.251	-0.240	183.6	162.9	188.4	159.0	136.9	144.2	0.86	0.88	0.83	0.92	0.96	0.92	0.966139	1.000000	-
Rv1324	-	5	14.3	13.2	9.4	17.9	15.3	20.3	0.424	0.336	0.000	0.668	0.497	0.810	43.0	44.0	31.4	53.7	30.7	33.8	0.33	0.30	0.30	0.33	0.50	0.60	0.902188	1.000000	-
Rv1325c	PE_PGRS24	8	106.9	93.1	99.9	125.6	104.4	88.1	0.093	-0.096	0.000	0.316	0.060	-0.173	142.6	124.2	133.2	143.5	128.5	117.4	0.75	0.75	0.75	0.88	0.81	0.75	0.994165	1.000000	-
Rv1326c	glgB	41	0.0	0.0	0.0	0.0	0.0	0.1	0.000	0.000	0.000	0.000	0.000	0.033	0.0	0.0	0.0	0.0	0.0	9.4	0.00	0.00	0.00	0.00	0.00	0.01	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1327c	glgE	35	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1328	glgP	40	114.8	134.6	116.1	143.3	146.0	137.2	-0.017	0.205	0.000	0.292	0.318	0.231	132.4	141.7	134.7	162.2	162.3	154.6	0.87	0.95	0.86	0.88	0.90	0.89	0.249967	1.000000	-
Rv1329c	dinG	23	98.2	147.9	104.3	115.8	115.4	110.8	-0.083	0.484	0.000	0.144	0.139	0.083	127.9	189.0	114.3	145.3	132.7	145.6	0.77	0.78	0.91	0.80	0.87	0.76	0.063043	0.554056	-
Rv1330c	-	23	315.7	303.4	328.5	285.9	279.9	275.0	-0.056	-0.113	0.000	-0.197	-0.227	-0.252	369.2	348.9	408.4	313.1	279.9	316.3	0.86	0.87	0.80	0.91	1.00	0.87	0.168604	0.995549	-
Rv1331	clpS	5	48.3	81.5	79.8	90.1	102.2	99.9	-0.671	0.029	0.000	0.165	0.337	0.307	60.4	81.5	88.7	96.5	102.2	99.9	0.80	1.00	0.90	0.93	1.00	1.00	0.263795	1.000000	-
Rv1332	-	6	66.3	74.0	51.0	131.1	112.9	78.9	0.347	0.494	0.000	1.280	1.073	0.582	66.3	74.0	55.7	131.1	112.9	78.9	1.00	1.00	0.92	1.00	1.00	1.00	0.010071	0.139525	-
Rv1333	-	9	142.5	206.8	121.3	153.7	173.5	170.1	0.225	0.746	0.000	0.330	0.500	0.472	183.2	218.9	145.5	197.6	195.2	191.3	0.78	0.94	0.83	0.78	0.89	0.89	0.645666	1.000000	-
Rv1334	-	10	127.9	212.9	179.1	223.7	185.2	171.7	-0.470	0.243	0.000	0.313	0.047	-0.059	127.9	212.9	179.1	223.7	185.2	171.7	1.00	1.00	1.00	1.00	1.00	1.00	0.289162	1.000000	-
Rv1335	-	4	100.4	155.2	118.0	140.7	128.9	186.3	-0.223	0.381	0.000	0.245	0.122	0.638	109.5	155.2	118.0	153.5	128.9	186.3	0.92	1.00	1.00	0.92	1.00	1.00	0.827970	1.000000	-
Rv1336	cysM	16	140.8	182.1	154.7	224.0	254.7	185.2	-0.131	0.229	0.000	0.521	0.702	0.252	147.0	187.9	165.0	224.0	254.7	185.2	0.96	0.97	0.94	1.00	1.00	1.00	0.036651	0.379843	-
Rv1337	-	12	164.8	216.3	159.8	296.4	314.8	243.0	0.043	0.425	0.000	0.871	0.957	0.590	164.8	216.3	159.8	296.4	314.8	243.0	1.00	1.00	1.00	1.00	1.00	1.00	0.000342	0.007764	-
Rv1338	murI	16	1.0	1.0	7.4	31.6	92.0	0.3	-1.057	-1.058	0.000	1.559	2.966	-1.218	15.5	10.3	26.4	47.4	101.6	10.8	0.06	0.09	0.28	0.67	0.91	0.03	0.000000	0.000000	-
Rv1339	-	16	1.4	8.5	2.5	58.3	66.6	4.3	-0.228	0.841	0.000	3.069	3.246	0.297	17.3	24.8	20.3	77.7	92.6	22.8	0.08	0.34	0.12	0.75	0.72	0.19	0.000000	0.000000	-
Rv1340	rph	13	54.3	102.2	59.9	134.6	135.2	67.9	-0.130	0.725	0.000	1.106	1.112	0.169	70.6	110.8	74.1	145.8	146.5	73.6	0.77	0.92	0.81	0.92	0.92	0.92	0.000317	0.007271	-
Rv1341	-	5	117.5	187.6	139.8	204.6	160.7	151.3	-0.241	0.411	0.000	0.534	0.195	0.111	117.5	187.6	139.8	219.3	160.7	151.3	1.00	1.00	1.00	0.93	1.00	1.00	0.397530	1.000000	-
Rv1342c	-	5	11.2	14.2	3.8	3.7	6.2	20.3	0.885	1.131	0.000	-0.017	0.345	1.525	21.0	17.8	18.9	13.8	12.3	28.9	0.53	0.80	0.20	0.27	0.50	0.70	0.015164	0.190270	-
Rv1343c	lprD	11	27.5	43.0	19.3	51.2	41.4	42.1	0.421	0.984	0.000	1.212	0.934	0.957	43.2	52.6	38.6	89.0	82.8	51.5	0.64	0.82	0.50	0.58	0.50	0.82	0.005614	0.087165	-
Rv1344	-	8	172.0	284.7	138.3	308.7	288.4	252.0	0.305	1.016	0.000	1.131	1.034	0.843	172.0	284.7	138.3	308.7	288.4	252.0	1.00	1.00	1.00	1.00	1.00	1.00	0.009010	0.128858	-
Rv1345	fadD33	23	137.3	154.1	154.1	172.0	185.1	168.0	-0.161	-0.000	0.000	0.154	0.257	0.121	163.3	161.1	172.9	182.6	198.0	179.7	0.84	0.96	0.89	0.94	0.93	0.93	0.624770	1.000000	-
Rv1346	fadE14	13	91.1	94.7	82.9	96.2	84.8	79.0	0.129	0.181	0.000	0.203	0.031	-0.065	114.6	111.9	93.7	104.2	110.2	102.7	0.79	0.85	0.88	0.92	0.77	0.77	0.667834	1.000000	-
Rv1347c	-	13	13.9	7.8	9.6	9.4	13.3	9.7	0.371	-0.188	0.000	-0.022	0.321	0.009	45.2	20.3	31.2	28.2	31.3	25.2	0.31	0.38	0.31	0.33	0.42	0.38	0.508287	1.000000	-
Rv1348	-	37	5.0	12.0	24.0	173.8	148.0	8.1	-1.536	-0.774	0.000	2.625	2.400	-1.144	30.8	32.8	45.5	203.1	168.5	22.3	0.16	0.36	0.53	0.86	0.88	0.36	0.000000	0.000000	-
Rv1349	-	17	5.6	19.7	39.2	118.4	92.5	9.1	-2.056	-0.840	0.000	1.482	1.143	-1.643	28.7	51.5	70.1	134.2	121.0	28.3	0.20	0.38	0.56	0.88	0.76	0.32	0.000000	0.000000	-
Rv1350	fabG	12	31.4	31.9	26.0	30.8	29.6	32.2	0.229	0.249	0.000	0.205	0.158	0.262	45.2	36.4	41.7	46.2	41.8	38.7	0.69	0.88	0.62	0.67	0.71	0.83	0.724898	1.000000	-
Rv1351	-	9	150.4	117.2	132.5	104.6	133.2	126.7	0.176	-0.171	0.000	-0.327	0.007	-0.062	176.6	140.6	198.8	157.0	159.9	142.5	0.85	0.83	0.67	0.67	0.83	0.89	0.787091	1.000000	-
Rv1352	-	5	130.0	110.3	116.9	109.1	110.6	174.3	0.148	-0.080	0.000	-0.095	-0.076	0.557	130.0	137.8	146.1	116.9	110.6	174.3	1.00	0.80	0.80	0.93	1.00	1.00	0.186102	1.000000	-
Rv1353c	-	12	121.8	79.8	106.0	101.7	91.2	91.0	0.191	-0.388	0.000	-0.057	-0.207	-0.210	132.8	91.2	110.6	104.6	99.5	104.0	0.92	0.88	0.96	0.97	0.92	0.88	0.744080	1.000000	-
Rv1354c	-	40	68.3	61.2	63.0	67.3	55.2	60.8	0.108	-0.040	0.000	0.088	-0.177	-0.047	89.1	72.0	84.0	82.4	65.9	78.5	0.77	0.85	0.75	0.82	0.84	0.78	0.832026	1.000000	-
Rv1355c	moeY	36	41.1	47.1	44.0	44.7	51.0	41.2	-0.089	0.088	0.000	0.019	0.192	-0.086	66.2	72.1	68.9	74.2	73.4	68.9	0.62	0.65	0.64	0.60	0.69	0.60	0.886419	1.000000	-
Rv1356c	-	25	79.9	77.9	78.7	82.4	81.5	75.6	0.021	-0.014	0.000	0.062	0.047	-0.054	105.2	92.8	103.6	116.6	107.2	90.0	0.76	0.84	0.76	0.71	0.76	0.84	0.828952	1.000000	-
Rv1357c	-	12	101.3	126.3	140.2	103.9	112.4	127.3	-0.450	-0.145	0.000	-0.415	-0.306	-0.134	114.0	151.6	177.1	124.7	134.9	145.5	0.89	0.83	0.79	0.83	0.83	0.88	0.568825	1.000000	-
Rv1358	-	66	89.6	91.5	89.3	89.0	93.8	92.5	0.005	0.033	0.000	-0.005	0.067	0.049	112.3	104.1	115.6	108.7	104.9	106.2	0.80	0.88	0.77	0.82	0.89	0.87	0.714629	1.000000	-
Rv1359	-	17	83.1	90.4	104.7	92.8	98.6	85.7	-0.315	-0.202	0.000	-0.165	-0.082	-0.274	90.2	105.9	114.8	98.6	104.8	91.1	0.92	0.85	0.91	0.94	0.94	0.94	0.755052	1.000000	-
Rv1360	-	12	238.4	176.3	176.0	191.3	174.8	186.6	0.427	0.002	0.000	0.117	-0.009	0.082	268.2	192.3	211.2	191.3	174.8	194.8	0.89	0.92	0.83	1.00	1.00	0.96	0.180340	1.000000	-
Rv1361c	PPE19	9	22.7	23.4	37.9	29.0	21.3	23.5	-0.633	-0.597	0.000	-0.337	-0.708	-0.591	47.1	35.1	85.3	55.9	63.8	52.8	0.48	0.67	0.44	0.52	0.33	0.44	0.325018	1.000000	-
Rv1362c	-	13	96.0	112.6	87.6	110.4	111.6	120.5	0.126	0.346	0.000	0.318	0.333	0.439	113.5	133.1	103.5	123.0	126.1	136.2	0.85	0.85	0.85	0.90	0.88	0.88	0.907613	1.000000	-
Rv1363c	-	6	132.5	120.9	156.2	118.8	120.3	129.6	-0.230	-0.356	0.000	-0.381	-0.364	-0.260	140.3	120.9	156.2	118.8	131.2	129.6	0.94	1.00	1.00	1.00	0.92	1.00	0.847137	1.000000	-
Rv1364c	-	31	115.9	154.2	127.6	167.5	158.6	113.8	-0.133	0.264	0.000	0.380	0.303	-0.158	122.5	156.7	136.3	175.1	163.8	117.6	0.95	0.98	0.94	0.96	0.97	0.97	0.114033	0.795442	-
Rv1365c	rsfA	5	152.5	176.2	158.5	207.4	132.6	177.0	-0.054	0.148	0.000	0.378	-0.248	0.155	152.5	176.2	158.5	207.4	132.6	177.0	1.00	1.00	1.00	1.00	1.00	1.00	0.272426	1.000000	-
Rv1366	-	17	34.1	32.7	41.0	33.8	32.4	27.5	-0.235	-0.288	0.000	-0.246	-0.297	-0.502	64.4	46.3	55.7	52.2	46.0	32.2	0.53	0.71	0.74	0.65	0.71	0.85	0.165402	0.994969	-
Rv1367c	-	13	140.5	133.6	143.2	119.2	130.3	141.9	-0.027	-0.097	0.000	-0.255	-0.131	-0.013	152.2	133.6	143.2	129.1	135.6	147.6	0.92	1.00	1.00	0.92	0.96	0.96	0.696398	1.000000	-
Rv1368	lprF	7	92.2	90.0	80.9	107.6	91.7	108.6	0.179	0.146	0.000	0.391	0.171	0.403	129.1	105.0	94.3	125.5	116.6	116.9	0.71	0.86	0.86	0.86	0.79	0.93	0.930342	1.000000	-
Rv1369c	-	21	288.2	299.4	310.6	314.3	283.7	285.8	-0.106	-0.052	0.000	0.017	-0.129	-0.118	378.2	359.3	407.7	412.5	350.4	333.4	0.76	0.83	0.76	0.76	0.81	0.86	0.989821	1.000000	-
Rv1370c	-	4	221.7	231.8	231.1	236.8	252.3	181.5	-0.059	0.004	0.000	0.034	0.124	-0.340	221.7	231.8	231.1	236.8	252.3	181.5	1.00	1.00	1.00	1.00	1.00	1.00	0.962949	1.000000	-
Rv1371	-	28	30.7	31.3	34.8	30.1	23.3	32.2	-0.158	-0.135	0.000	-0.183	-0.492	-0.098	43.0	44.9	48.8	38.9	38.4	40.1	0.71	0.70	0.71	0.77	0.61	0.80	0.416848	1.000000	-
Rv1372	-	18	52.1	67.8	56.2	53.6	47.8	56.4	-0.098	0.251	0.000	-0.061	-0.213	0.005	70.4	78.7	67.4	72.4	53.7	75.2	0.74	0.86	0.83	0.74	0.89	0.75	0.435183	1.000000	-
Rv1373	-	17	137.7	164.7	154.8	145.6	148.0	137.0	-0.164	0.086	0.000	-0.086	-0.064	-0.170	146.3	164.7	154.8	145.6	148.0	137.0	0.94	1.00	1.00	1.00	1.00	1.00	0.456218	1.000000	-
Rv1374c	-	12	210.1	219.6	214.0	207.9	232.2	236.2	-0.025	0.037	0.000	-0.040	0.116	0.140	216.1	219.6	214.0	207.9	232.2	236.2	0.97	1.00	1.00	1.00	1.00	1.00	0.873559	1.000000	-
Rv1375	-	20	167.7	176.9	176.0	172.2	177.9	175.9	-0.067	0.007	0.000	-0.031	0.015	-0.001	183.0	196.5	195.5	198.7	187.3	190.1	0.92	0.90	0.90	0.87	0.95	0.93	0.979992	1.000000	-
Rv1376	-	14	174.2	175.2	173.3	171.5	154.5	178.7	0.008	0.016	0.000	-0.014	-0.161	0.043	187.6	196.3	186.6	180.1	173.0	192.4	0.93	0.89	0.93	0.95	0.89	0.93	0.993370	1.000000	-
Rv1377c	-	10	95.1	111.7	115.7	110.5	121.5	111.9	-0.270	-0.049	0.000	-0.064	0.068	-0.046	101.9	148.9	128.6	118.4	143.0	124.4	0.93	0.75	0.90	0.93	0.85	0.90	0.291858	1.000000	-
Rv1378c	-	19	158.0	140.0	154.3	142.3	158.3	150.7	0.033	-0.136	0.000	-0.113	0.036	-0.033	180.1	197.1	172.5	184.3	200.5	173.6	0.88	0.71	0.89	0.77	0.79	0.87	0.328258	1.000000	-
Rv1379	pyrR	7	39.1	37.0	44.2	26.7	38.9	22.0	-0.160	-0.230	0.000	-0.637	-0.165	-0.866	136.8	129.5	154.8	93.4	181.7	61.6	0.29	0.29	0.29	0.29	0.21	0.36	0.902935	1.000000	-
Rv1380	pyrB	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1381	pyrC	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1382	-	6	5.3	3.4	3.1	0.0	4.2	1.7	0.340	0.051	0.000	-0.705	0.176	-0.286	16.0	13.8	18.9	0.0	12.6	10.1	0.33	0.25	0.17	0.00	0.33	0.17	0.139131	0.910057	-
Rv1383	carA	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1384	carB	42	0.0	0.1	0.0	0.2	0.0	0.0	0.000	0.035	0.000	0.061	0.000	0.000	0.0	10.4	0.0	13.7	0.0	0.0	0.00	0.01	0.00	0.02	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1385	pyrF	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1386	PE15	5	20.1	30.7	23.2	59.6	52.9	38.5	-0.168	0.341	0.000	1.198	1.039	0.627	33.5	30.7	33.1	59.6	52.9	38.5	0.60	1.00	0.70	1.00	1.00	1.00	0.000132	0.003338	-
Rv1387	PPE20	24	87.1	129.1	105.8	231.9	230.3	117.6	-0.267	0.275	0.000	1.096	1.086	0.146	98.0	134.7	123.9	231.9	230.3	120.1	0.89	0.96	0.85	1.00	1.00	0.98	0.000000	0.000000	-
Rv1388	mihF	5	36.6	29.7	26.3	59.8	43.1	37.1	0.413	0.149	0.000	1.051	0.622	0.430	55.0	37.1	32.8	59.8	43.1	46.4	0.67	0.80	0.80	1.00	1.00	0.80	0.088098	0.694601	-
Rv1389	gmk	6	0.0	0.0	1.0	0.0	0.0	0.0	-0.275	-0.275	0.000	-0.275	-0.275	-0.275	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.08	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1390	rpoZ	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1391	dfp	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1392	metK	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1393c	-	24	165.0	154.5	153.3	160.8	170.5	161.3	0.102	0.011	0.000	0.067	0.149	0.071	180.0	168.6	179.5	178.1	186.0	180.0	0.92	0.92	0.85	0.90	0.92	0.90	0.995044	1.000000	-
Rv1394c	cyp132	18	99.2	116.9	91.8	115.9	104.8	115.6	0.106	0.333	0.000	0.320	0.182	0.317	116.4	123.8	100.1	122.7	117.9	126.1	0.85	0.94	0.92	0.94	0.89	0.92	0.806697	1.000000	-
Rv1395	-	13	116.3	119.4	116.1	129.7	121.0	132.2	0.002	0.038	0.000	0.153	0.057	0.180	151.1	147.8	125.8	168.6	149.8	156.2	0.77	0.81	0.92	0.77	0.81	0.85	0.768001	1.000000	-
Rv1396c	PE_PGRS25	12	155.8	143.3	180.0	166.2	167.4	147.5	-0.202	-0.319	0.000	-0.112	-0.102	-0.279	207.7	163.8	216.0	187.0	191.3	160.9	0.75	0.88	0.83	0.89	0.88	0.92	0.940498	1.000000	-
Rv1397c	-	6	98.3	108.8	89.2	117.6	132.7	128.8	0.134	0.273	0.000	0.381	0.548	0.506	118.0	163.2	107.0	141.2	159.3	154.5	0.83	0.67	0.83	0.83	0.83	0.83	0.826095	1.000000	-
Rv1398c	-	3	187.6	261.0	201.3	235.4	256.1	229.6	-0.099	0.367	0.000	0.221	0.340	0.185	187.6	261.0	201.3	235.4	256.1	229.6	1.00	1.00	1.00	1.00	1.00	1.00	0.244961	1.000000	-
Rv1399c	lipH	14	125.4	142.3	153.1	158.2	131.5	140.9	-0.278	-0.102	0.000	0.046	-0.212	-0.116	150.5	153.3	164.8	179.6	147.3	146.1	0.83	0.93	0.93	0.88	0.89	0.96	0.902161	1.000000	-
Rv1400c	lipI	15	90.3	69.0	84.6	73.5	79.2	63.9	0.090	-0.276	0.000	-0.191	-0.089	-0.378	109.9	86.2	126.8	114.0	91.4	79.9	0.82	0.80	0.67	0.64	0.87	0.80	0.316998	1.000000	-
Rv1401	-	5	27.2	18.2	32.4	21.3	26.5	29.4	-0.217	-0.688	0.000	-0.509	-0.248	-0.121	34.0	22.8	40.6	26.7	29.5	32.7	0.80	0.80	0.80	0.80	0.90	0.90	0.894747	1.000000	-
Rv1402	priA	22	4.4	7.9	3.0	2.6	5.3	3.1	0.228	0.685	0.000	-0.067	0.364	0.019	26.2	21.6	18.8	21.8	19.4	17.1	0.17	0.36	0.16	0.12	0.27	0.18	0.236096	1.000000	-
Rv1403c	-	13	69.8	67.5	40.9	75.8	89.3	68.3	0.704	0.658	0.000	0.814	1.038	0.674	82.5	73.1	56.0	86.9	92.9	68.3	0.85	0.92	0.73	0.87	0.96	1.00	0.081453	0.663356	-
Rv1404	-	5	20.9	24.3	25.6	26.3	35.9	44.9	-0.242	-0.062	0.000	0.033	0.420	0.705	44.7	24.3	51.2	39.4	59.9	49.8	0.47	1.00	0.50	0.67	0.60	0.90	0.013838	0.178680	-
Rv1405c	-	10	187.5	160.9	165.5	162.1	171.8	159.3	0.175	-0.039	0.000	-0.029	0.053	-0.053	216.3	169.4	165.5	167.7	180.8	159.3	0.87	0.95	1.00	0.97	0.95	1.00	0.717737	1.000000	-
Rv1406	fmt	9	9.5	11.9	2.8	5.8	9.0	6.7	0.892	1.116	0.000	0.465	0.846	0.580	23.3	21.4	16.8	17.3	20.3	15.0	0.41	0.56	0.17	0.33	0.44	0.44	0.298536	1.000000	-
Rv1407	fmu	19	189.9	206.0	223.8	208.2	222.3	217.7	-0.231	-0.117	0.000	-0.102	-0.009	-0.039	225.5	230.2	242.9	237.3	264.0	250.7	0.84	0.89	0.92	0.88	0.84	0.87	0.921701	1.000000	-
Rv1408	rpe	11	23.2	31.4	20.5	20.8	29.7	20.7	0.148	0.516	0.000	0.019	0.444	0.014	40.4	34.6	37.6	34.4	40.8	26.8	0.58	0.91	0.55	0.61	0.73	0.77	0.249686	1.000000	-
Rv1409	ribG	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1410c	-	27	39.8	80.4	64.4	71.4	108.9	57.7	-0.629	0.300	0.000	0.139	0.716	-0.146	65.9	103.4	91.5	101.5	115.3	67.8	0.60	0.78	0.70	0.70	0.94	0.85	0.000015	0.000446	-
Rv1411c	lprG	8	7.5	20.8	11.8	23.3	36.7	16.0	-0.423	0.625	0.000	0.758	1.315	0.328	22.5	30.3	23.5	31.1	48.9	25.7	0.33	0.69	0.50	0.75	0.75	0.62	0.004133	0.066766	-
Rv1412	ribC	5	0.0	1.0	0.0	0.0	1.5	0.0	0.000	0.263	0.000	0.000	0.367	0.000	0.0	10.0	0.0	0.0	14.5	0.0	0.00	0.10	0.00	0.00	0.10	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1413	-	4	360.0	310.8	335.0	384.8	339.1	313.7	0.102	-0.107	0.000	0.197	0.017	-0.093	360.0	310.8	335.0	384.8	339.1	313.7	1.00	1.00	1.00	1.00	1.00	1.00	0.988441	1.000000	-
Rv1414	-	3	222.8	313.5	213.1	212.0	195.8	206.3	0.063	0.546	0.000	-0.008	-0.120	-0.046	222.8	313.5	213.1	212.0	195.8	206.3	1.00	1.00	1.00	1.00	1.00	1.00	0.785452	1.000000	-
Rv1415	ribA2	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1416	ribH	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1417	-	7	84.1	70.1	105.3	138.5	109.7	81.9	-0.307	-0.555	0.000	0.380	0.057	-0.344	160.6	140.1	210.5	193.9	153.6	114.6	0.52	0.50	0.50	0.71	0.71	0.71	0.876783	1.000000	-
Rv1418	lprH	13	101.3	101.9	103.0	104.8	96.6	108.2	-0.022	-0.015	0.000	0.024	-0.088	0.068	131.7	132.4	133.9	136.3	125.6	134.0	0.77	0.77	0.77	0.77	0.77	0.81	0.999983	1.000000	-
Rv1419	-	3	20.1	34.1	44.9	34.7	30.4	37.1	-0.994	-0.354	0.000	-0.332	-0.496	-0.245	25.8	40.9	44.9	34.7	30.4	37.1	0.78	0.83	1.00	1.00	1.00	1.00	0.470044	1.000000	-
Rv1420	uvrC	25	75.9	72.8	68.4	77.2	81.7	75.2	0.140	0.084	0.000	0.163	0.240	0.127	96.4	82.8	79.5	86.4	86.9	87.4	0.79	0.88	0.86	0.89	0.94	0.86	0.747425	1.000000	-
Rv1421	-	19	88.8	88.1	68.6	97.8	88.7	89.7	0.350	0.339	0.000	0.482	0.347	0.363	110.1	101.5	84.1	113.8	96.3	103.3	0.81	0.87	0.82	0.86	0.92	0.87	0.843279	1.000000	-
Rv1422	-	9	161.5	191.7	243.0	197.9	206.7	157.4	-0.575	-0.335	0.000	-0.289	-0.229	-0.611	181.7	246.4	291.6	222.7	232.5	202.3	0.89	0.78	0.83	0.89	0.89	0.78	0.830512	1.000000	-
Rv1423	whiA	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1424c	-	17	55.2	68.2	55.1	61.4	75.8	61.9	0.004	0.285	0.000	0.144	0.428	0.156	68.7	77.2	66.9	74.5	83.1	70.2	0.80	0.88	0.82	0.82	0.91	0.88	0.905277	1.000000	-
Rv1425	-	17	151.3	163.2	149.8	158.3	155.2	144.1	0.014	0.120	0.000	0.078	0.050	-0.054	160.7	179.0	169.8	158.3	164.9	163.4	0.94	0.91	0.88	1.00	0.94	0.88	0.386301	1.000000	-
Rv1426c	lipO	26	97.2	78.7	63.7	75.3	83.3	79.5	0.573	0.286	0.000	0.225	0.363	0.300	122.3	102.4	75.3	96.3	103.2	94.0	0.79	0.77	0.85	0.78	0.81	0.85	0.301346	1.000000	-
Rv1427c	fadD12	16	45.9	58.6	46.7	54.4	45.8	44.7	-0.024	0.298	0.000	0.200	-0.025	-0.059	62.9	72.1	68.0	74.7	56.4	55.0	0.73	0.81	0.69	0.73	0.81	0.81	0.939785	1.000000	-
Rv1428c	-	16	61.7	88.6	79.0	73.7	82.6	76.9	-0.332	0.157	0.000	-0.093	0.061	-0.036	80.1	105.0	109.8	101.1	94.3	91.1	0.77	0.84	0.72	0.73	0.88	0.84	0.838423	1.000000	-
Rv1429	-	21	122.2	121.6	129.2	130.2	117.1	113.7	-0.077	-0.083	0.000	0.012	-0.136	-0.177	145.2	159.6	159.5	164.1	149.1	132.6	0.84	0.76	0.81	0.79	0.79	0.86	0.938393	1.000000	-
Rv1430	PE16	36	81.1	71.1	78.0	83.0	83.4	81.8	0.053	-0.125	0.000	0.084	0.090	0.064	105.5	82.6	95.2	100.7	96.8	92.0	0.77	0.86	0.82	0.82	0.86	0.89	0.885569	1.000000	-
Rv1431	-	25	41.9	33.5	53.1	24.3	31.5	33.6	-0.309	-0.593	0.000	-0.988	-0.671	-0.588	59.3	47.9	88.5	37.9	42.5	43.1	0.71	0.70	0.60	0.64	0.74	0.78	0.003364	0.057110	-
Rv1432	-	15	160.8	59.7	175.8	6.3	14.4	42.1	-0.126	-1.483	0.000	-3.995	-3.218	-1.941	176.5	71.6	219.8	25.9	22.8	50.5	0.91	0.83	0.80	0.24	0.63	0.83	0.000000	0.000000	-
Rv1433	-	16	182.9	195.7	191.4	195.4	157.7	175.5	-0.064	0.031	0.000	0.029	-0.272	-0.122	195.1	195.7	211.2	208.4	168.2	187.2	0.94	1.00	0.91	0.94	0.94	0.94	0.892738	1.000000	-
Rv1434	-	1	128.3	143.2	118.7	222.0	168.7	114.3	0.108	0.261	0.000	0.876	0.489	-0.052	128.3	143.2	118.7	222.0	168.7	114.3	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1435c	-	16	156.1	137.2	163.0	127.1	140.0	133.5	-0.060	-0.241	0.000	-0.347	-0.212	-0.278	220.4	199.6	226.8	179.4	186.7	194.2	0.71	0.69	0.72	0.71	0.75	0.69	0.998206	1.000000	-
Rv1436	gap	12	4.4	2.1	1.0	0.0	0.0	0.0	0.634	0.238	0.000	-0.275	-0.275	-0.275	17.5	10.2	12.6	0.0	0.0	0.0	0.25	0.21	0.08	0.00	0.00	0.00	0.000022	0.000652	-
Rv1437	pgk	14	3.4	2.5	1.8	0.7	0.0	0.7	0.303	0.149	0.000	-0.256	-0.444	-0.249	23.7	11.8	16.8	14.6	0.0	10.1	0.14	0.21	0.11	0.05	0.00	0.07	0.070292	0.600568	-
Rv1438	tpiA	14	0.0	0.4	0.0	0.0	0.0	0.0	0.000	0.103	0.000	0.000	0.000	0.000	0.0	10.4	0.0	0.0	0.0	0.0	0.00	0.04	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1439c	-	7	76.2	95.9	85.3	87.1	72.5	73.7	-0.154	0.161	0.000	0.028	-0.221	-0.198	99.9	95.9	91.9	87.1	72.5	79.4	0.76	1.00	0.93	1.00	1.00	0.93	0.256988	1.000000	-
Rv1440	secG	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1441c	PE_PGRS26	17	153.3	191.7	161.6	165.2	154.5	140.0	-0.074	0.239	0.000	0.031	-0.063	-0.201	177.7	203.7	203.5	205.5	169.4	170.0	0.86	0.94	0.79	0.80	0.91	0.82	0.779863	1.000000	-
Rv1442	bisC	35	159.5	152.5	169.0	166.2	153.7	157.0	-0.081	-0.144	0.000	-0.023	-0.133	-0.103	190.3	164.2	200.5	187.7	168.1	171.7	0.84	0.93	0.84	0.89	0.91	0.91	0.938092	1.000000	-
Rv1443c	-	1	167.9	189.4	75.1	204.3	129.9	164.0	1.110	1.279	0.000	1.385	0.751	1.076	167.9	189.4	75.1	204.3	129.9	164.0	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1444c	-	3	94.4	49.5	74.9	74.6	40.9	65.1	0.314	-0.553	0.000	-0.006	-0.799	-0.189	94.4	49.5	74.9	74.6	40.9	65.1	1.00	1.00	1.00	1.00	1.00	1.00	0.156353	0.965712	-
Rv1445c	devB	7	55.6	82.0	51.0	57.1	51.6	46.6	0.113	0.634	0.000	0.147	0.013	-0.120	83.4	114.8	79.4	74.9	80.2	72.5	0.67	0.71	0.64	0.76	0.64	0.64	0.969816	1.000000	-
Rv1446c	opcA	13	69.4	46.2	87.5	35.6	60.0	62.1	-0.314	-0.854	0.000	-1.188	-0.508	-0.463	96.7	66.7	103.4	77.1	82.1	73.4	0.72	0.69	0.85	0.46	0.73	0.85	0.034649	0.364513	-
Rv1447c	zwf2	15	85.8	88.4	100.2	83.4	87.5	76.1	-0.213	-0.171	0.000	-0.252	-0.187	-0.376	110.3	94.8	130.7	96.2	97.2	81.5	0.78	0.93	0.77	0.87	0.90	0.93	0.631292	1.000000	-
Rv1448c	tal	11	91.2	102.3	104.9	99.7	80.8	82.5	-0.192	-0.034	0.000	-0.069	-0.357	-0.329	167.2	173.2	164.8	143.1	104.6	113.4	0.55	0.59	0.64	0.70	0.77	0.73	0.883570	1.000000	-
Rv1449c	tkt	20	0.4	0.0	0.0	0.0	0.0	0.0	0.108	0.000	0.000	0.000	0.000	0.000	23.3	0.0	0.0	0.0	0.0	0.0	0.02	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1450c	PE_PGRS27	28	102.6	103.8	117.0	109.8	114.8	95.8	-0.181	-0.165	0.000	-0.088	-0.026	-0.275	143.6	145.3	148.9	173.9	139.7	119.2	0.71	0.71	0.79	0.63	0.82	0.80	0.347741	1.000000	-
Rv1451	ctaB	15	4.8	4.4	5.0	1.5	0.8	3.0	-0.032	-0.090	0.000	-0.619	-0.791	-0.330	21.5	16.5	21.5	22.7	11.8	11.1	0.22	0.27	0.23	0.07	0.07	0.27	0.006722	0.100458	-
Rv1452c	PE_PGRS28	14	239.1	226.0	202.3	220.5	243.9	203.8	0.236	0.156	0.000	0.121	0.264	0.010	304.3	287.6	246.3	257.2	310.5	211.3	0.79	0.79	0.82	0.86	0.79	0.96	0.608543	1.000000	-
Rv1453	-	10	236.7	237.6	218.5	222.8	223.3	234.6	0.113	0.118	0.000	0.027	0.030	0.100	253.6	250.1	242.8	230.4	248.1	276.0	0.93	0.95	0.90	0.97	0.90	0.85	0.956369	1.000000	-
Rv1454c	qor	15	270.2	266.1	265.2	258.1	289.4	252.7	0.026	0.005	0.000	-0.038	0.124	-0.069	270.2	295.7	274.4	258.1	299.4	252.7	1.00	0.90	0.97	1.00	0.97	1.00	0.335872	1.000000	-
Rv1455	-	12	225.6	216.2	201.4	227.0	220.5	214.2	0.160	0.100	0.000	0.168	0.128	0.087	253.8	235.8	254.4	240.3	230.1	244.8	0.89	0.92	0.79	0.94	0.96	0.88	0.940971	1.000000	-
Rv1456c	-	13	5.7	15.7	7.7	2.1	2.5	4.4	-0.248	0.701	0.000	-0.836	-0.762	-0.441	22.3	29.1	22.3	20.7	10.8	18.9	0.26	0.54	0.35	0.10	0.23	0.23	0.000089	0.002318	-
Rv1457c	-	8	56.5	75.3	65.6	70.9	73.5	61.5	-0.198	0.186	0.000	0.105	0.153	-0.086	61.7	75.3	95.4	77.3	73.5	70.3	0.92	1.00	0.69	0.92	1.00	0.88	0.169904	0.998408	-
Rv1458c	-	13	199.6	208.5	160.2	220.8	182.2	211.8	0.308	0.370	0.000	0.451	0.180	0.392	228.9	208.5	173.6	232.7	197.4	229.4	0.87	1.00	0.92	0.95	0.92	0.92	0.613505	1.000000	-
Rv1459c	-	23	25.4	33.2	27.5	33.6	32.6	33.1	-0.094	0.235	0.000	0.249	0.208	0.229	146.3	191.2	180.7	193.4	187.2	190.3	0.17	0.17	0.15	0.17	0.17	0.17	0.999581	1.000000	-
Rv1460	-	7	115.2	52.4	61.7	33.5	42.0	47.0	0.849	-0.217	0.000	-0.792	-0.505	-0.360	142.3	61.1	78.5	88.0	117.6	65.8	0.81	0.86	0.79	0.38	0.36	0.71	0.001443	0.027822	-
Rv1461	-	56	0.0	0.0	0.0	0.0	0.0	0.1	0.000	0.000	0.000	0.000	0.000	0.024	0.0	0.0	0.0	0.0	0.0	9.4	0.00	0.00	0.00	0.00	0.00	0.01	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1462	-	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1463	-	10	0.0	0.0	0.0	0.0	0.0	0.5	0.000	0.000	0.000	0.000	0.000	0.148	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1464	csd	15	3.5	0.7	4.6	0.3	0.0	0.7	-0.178	-0.765	0.000	-0.856	-0.945	-0.751	22.6	10.0	27.8	14.4	0.0	10.8	0.16	0.07	0.17	0.02	0.00	0.07	0.019489	0.230754	-
Rv1465	-	7	19.9	16.7	19.7	12.0	19.3	15.9	0.017	-0.186	0.000	-0.538	-0.018	-0.237	38.1	46.7	39.3	83.9	90.3	111.5	0.52	0.36	0.50	0.14	0.21	0.14	0.006792	0.101124	-
Rv1466	-	1	82.6	116.7	40.7	23.3	56.0	60.8	0.937	1.412	0.000	-0.695	0.414	0.524	82.6	116.7	40.7	23.3	56.0	60.8	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1467c	fadE15	25	147.4	165.5	146.6	135.2	164.4	157.9	0.007	0.169	0.000	-0.113	0.160	0.104	151.4	165.5	152.7	137.0	164.4	157.9	0.97	1.00	0.96	0.99	1.00	1.00	0.472438	1.000000	-
Rv1468c	PE_PGRS29	9	133.2	126.3	120.5	133.7	176.0	120.4	0.139	0.065	0.000	0.144	0.528	-0.001	171.3	142.1	144.6	164.0	176.0	166.7	0.78	0.89	0.83	0.81	1.00	0.72	0.437527	1.000000	-
Rv1469	ctpD	18	126.4	143.4	119.2	121.0	127.8	132.5	0.081	0.258	0.000	0.021	0.097	0.147	155.1	172.1	153.2	151.9	153.3	149.1	0.81	0.83	0.78	0.80	0.83	0.89	0.996489	1.000000	-
Rv1470	trxA	5	120.2	144.5	120.8	130.5	111.4	137.8	-0.007	0.250	0.000	0.108	-0.112	0.183	150.3	144.5	134.2	130.5	111.4	137.8	0.80	1.00	0.90	1.00	1.00	1.00	0.598579	1.000000	-
Rv1471	trxB1	2	304.8	386.8	414.3	320.9	219.7	258.6	-0.437	-0.098	0.000	-0.364	-0.900	-0.670	304.8	386.8	414.3	320.9	219.7	258.6	1.00	1.00	1.00	1.00	1.00	1.00	0.153923	0.956622	-
Rv1472	echA12	14	149.5	155.9	167.3	176.5	167.3	150.4	-0.157	-0.099	0.000	0.075	-0.000	-0.149	153.1	155.9	173.5	176.5	167.3	150.4	0.98	1.00	0.96	1.00	1.00	1.00	0.907614	1.000000	-
Rv1473	-	22	111.8	125.9	113.3	111.7	136.2	116.5	-0.019	0.146	0.000	-0.020	0.255	0.038	123.0	138.5	127.8	134.0	149.8	138.6	0.91	0.91	0.89	0.83	0.91	0.84	0.647548	1.000000	-
Rv1473A	-	4	235.3	266.7	215.9	289.3	248.8	318.5	0.121	0.298	0.000	0.414	0.200	0.550	235.3	266.7	215.9	289.3	248.8	318.5	1.00	1.00	1.00	1.00	1.00	1.00	0.814313	1.000000	-
Rv1474c	-	8	208.6	196.5	239.3	132.3	134.3	163.8	-0.194	-0.278	0.000	-0.831	-0.811	-0.534	278.2	224.5	273.5	158.8	179.1	187.1	0.75	0.88	0.88	0.83	0.75	0.88	0.849874	1.000000	-
Rv1475c	acn	47	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1476	-	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1477	-	21	5.4	7.7	5.2	15.6	22.3	8.7	0.035	0.322	0.000	1.016	1.422	0.425	34.3	32.5	36.3	51.7	52.1	36.5	0.16	0.24	0.14	0.30	0.43	0.24	0.079525	0.655513	-
Rv1478	-	7	207.3	199.1	218.8	171.0	192.4	185.0	-0.076	-0.133	0.000	-0.347	-0.181	-0.236	229.1	199.1	218.8	199.5	207.2	215.8	0.90	1.00	1.00	0.86	0.93	0.86	0.756258	1.000000	-
Rv1479	moxR1	13	0.0	0.0	0.0	0.0	0.3	0.0	0.000	0.000	0.000	0.000	0.097	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1480	-	5	0.0	0.0	0.0	0.0	0.0	10.1	0.000	0.000	0.000	0.000	0.000	1.597	0.0	0.0	0.0	0.0	0.0	50.7	0.00	0.00	0.00	0.00	0.00	0.20	0.145789	0.930896	-
Rv1481	-	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1482c	-	14	219.6	239.5	211.0	228.4	215.7	197.1	0.056	0.179	0.000	0.112	0.031	-0.096	242.7	248.4	236.3	246.0	232.3	197.1	0.90	0.96	0.89	0.93	0.93	1.00	0.877362	1.000000	-
Rv1483	fabG1	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1484	inhA	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1485	hemH	24	0.8	0.0	1.3	68.9	83.5	9.9	-0.120	-0.331	0.000	3.553	3.815	1.239	18.9	0.0	31.0	93.6	95.5	27.8	0.04	0.00	0.04	0.74	0.88	0.35	0.000000	0.000000	-
Rv1486c	-	7	249.2	263.2	273.9	257.7	275.7	272.8	-0.134	-0.056	0.000	-0.086	0.009	-0.006	249.2	263.2	273.9	257.7	275.7	272.8	1.00	1.00	1.00	1.00	1.00	1.00	0.998824	1.000000	-
Rv1487	-	3	221.8	151.8	115.4	186.3	92.4	128.7	0.913	0.380	0.000	0.667	-0.307	0.151	221.8	151.8	115.4	186.3	92.4	128.7	1.00	1.00	1.00	1.00	1.00	1.00	0.110942	0.784724	-
Rv1488	-	14	309.9	289.2	259.1	247.4	242.9	289.8	0.254	0.156	0.000	-0.065	-0.091	0.159	325.4	311.4	290.2	266.4	261.6	312.0	0.95	0.93	0.89	0.93	0.93	0.93	0.984669	1.000000	-
Rv1489	-	6	284.1	290.0	305.4	299.5	299.5	291.2	-0.103	-0.073	0.000	-0.028	-0.028	-0.068	284.1	290.0	305.4	299.5	299.5	291.2	1.00	1.00	1.00	1.00	1.00	1.00	0.999932	1.000000	-
Rv1489A	-	4	249.0	241.0	205.9	235.5	255.5	190.2	0.269	0.222	0.000	0.190	0.305	-0.111	249.0	241.0	205.9	235.5	255.5	190.2	1.00	1.00	1.00	1.00	1.00	1.00	0.939798	1.000000	-
Rv1490	-	37	30.8	33.1	31.5	26.0	38.9	33.5	-0.026	0.062	0.000	-0.232	0.267	0.078	55.1	55.6	52.9	40.1	47.9	43.5	0.56	0.59	0.59	0.65	0.81	0.77	0.022982	0.263498	-
Rv1491c	-	14	154.7	147.7	138.0	158.2	157.2	161.4	0.159	0.094	0.000	0.190	0.182	0.219	196.9	172.3	175.7	195.4	191.4	188.4	0.79	0.86	0.79	0.81	0.82	0.86	0.999639	1.000000	-
Rv1492	mutA	13	175.2	193.2	231.2	211.0	197.1	176.3	-0.391	-0.253	0.000	-0.129	-0.225	-0.382	195.2	209.3	250.5	257.1	222.8	218.3	0.90	0.92	0.92	0.82	0.88	0.81	0.621273	1.000000	-
Rv1493	mutB	28	175.2	175.7	172.4	172.2	164.9	163.6	0.022	0.027	0.000	-0.001	-0.063	-0.074	241.2	228.9	219.4	212.8	196.4	190.8	0.73	0.77	0.79	0.81	0.84	0.86	0.963225	1.000000	-
Rv1494	-	8	181.4	143.1	180.4	178.3	168.6	145.6	0.008	-0.324	0.000	-0.016	-0.094	-0.300	256.0	163.5	222.0	237.7	245.3	194.1	0.71	0.88	0.81	0.75	0.69	0.75	0.885775	1.000000	-
Rv1495	-	5	162.5	125.7	171.7	127.7	129.7	187.3	-0.077	-0.435	0.000	-0.413	-0.391	0.122	162.5	139.7	171.7	159.7	129.7	187.3	1.00	0.90	1.00	0.80	1.00	1.00	0.227156	1.000000	-
Rv1496	-	3	247.8	234.2	229.9	219.7	178.9	217.7	0.105	0.026	0.000	-0.064	-0.353	-0.077	247.8	234.2	229.9	219.7	178.9	217.7	1.00	1.00	1.00	1.00	1.00	1.00	0.887581	1.000000	-
Rv1497	lipL	14	274.8	234.0	214.0	200.1	229.2	236.3	0.353	0.126	0.000	-0.095	0.097	0.140	339.4	284.8	260.6	254.6	279.0	287.7	0.81	0.82	0.82	0.79	0.82	0.82	0.999221	1.000000	-
Rv1498c	-	16	81.8	99.1	78.2	82.4	88.2	120.5	0.061	0.324	0.000	0.072	0.164	0.594	100.6	105.7	83.4	89.9	94.1	128.5	0.81	0.94	0.94	0.92	0.94	0.94	0.102240	0.747565	-
Rv1498A	-	3	218.1	266.7	196.1	301.6	245.4	281.7	0.150	0.434	0.000	0.608	0.316	0.511	218.1	266.7	196.1	301.6	245.4	281.7	1.00	1.00	1.00	1.00	1.00	1.00	0.124928	0.842014	-
Rv1499	-	4	142.3	120.5	154.0	108.0	134.4	123.4	-0.110	-0.341	0.000	-0.493	-0.189	-0.308	142.3	120.5	154.0	108.0	134.4	123.4	1.00	1.00	1.00	1.00	1.00	1.00	0.810574	1.000000	-
Rv1500	-	32	21.2	27.9	23.7	24.7	22.8	28.1	-0.129	0.199	0.000	0.051	-0.043	0.209	53.6	48.3	47.3	56.5	47.1	47.4	0.40	0.58	0.50	0.44	0.48	0.59	0.701327	1.000000	-
Rv1501	-	30	44.1	48.6	34.5	52.7	56.3	58.3	0.314	0.440	0.000	0.546	0.634	0.678	76.4	76.8	64.7	83.2	86.7	79.4	0.58	0.63	0.53	0.63	0.65	0.73	0.736124	1.000000	-
Rv1502	-	32	36.3	47.3	44.4	43.9	41.2	47.7	-0.258	0.084	0.000	-0.013	-0.094	0.094	56.2	61.8	67.6	61.1	55.0	63.6	0.65	0.77	0.66	0.72	0.75	0.75	0.891216	1.000000	-
Rv1503c	-	18	181.3	180.1	179.8	171.0	165.0	162.4	0.012	0.003	0.000	-0.071	-0.121	-0.143	212.8	202.6	248.9	200.7	180.0	171.9	0.85	0.89	0.72	0.85	0.92	0.94	0.639602	1.000000	-
Rv1504c	-	12	287.6	249.9	301.5	306.2	291.3	283.6	-0.067	-0.266	0.000	0.022	-0.049	-0.087	287.6	249.9	301.5	306.2	291.3	283.6	1.00	1.00	1.00	1.00	1.00	1.00	0.973460	1.000000	-
Rv1505c	-	25	35.9	33.0	37.6	40.7	38.0	40.9	-0.058	-0.163	0.000	0.104	0.015	0.108	74.7	58.9	64.7	59.9	54.3	58.4	0.48	0.56	0.58	0.68	0.70	0.70	0.544814	1.000000	-
Rv1506c	-	19	73.8	78.5	84.0	89.1	90.5	74.7	-0.176	-0.093	0.000	0.080	0.102	-0.160	89.5	102.8	114.0	123.9	107.5	97.8	0.82	0.76	0.74	0.72	0.84	0.76	0.500638	1.000000	-
Rv1507c	-	26	9.8	16.2	14.9	13.9	15.8	14.1	-0.433	0.091	0.000	-0.079	0.062	-0.058	42.3	42.1	36.9	33.8	30.4	31.9	0.23	0.38	0.40	0.41	0.52	0.44	0.285858	1.000000	-
Rv1507A	-	16	30.0	39.6	40.6	33.0	40.5	51.4	-0.382	-0.031	0.000	-0.262	-0.004	0.307	57.6	57.6	72.1	54.6	53.9	78.3	0.52	0.69	0.56	0.60	0.75	0.66	0.763539	1.000000	-
Rv1508c	-	40	132.3	133.1	126.3	142.4	139.5	148.3	0.064	0.072	0.000	0.167	0.138	0.223	163.7	152.1	155.5	162.8	155.1	164.7	0.81	0.88	0.81	0.88	0.90	0.90	0.941055	1.000000	-
Rv1508A	-	13	105.4	160.2	130.3	124.2	117.6	102.3	-0.293	0.288	0.000	-0.067	-0.143	-0.335	114.2	166.6	141.2	124.2	122.3	110.8	0.92	0.96	0.92	1.00	0.96	0.92	0.468488	1.000000	-
Rv1509	-	16	45.8	39.2	24.8	43.1	56.0	41.6	0.771	0.570	0.000	0.689	1.033	0.644	88.0	66.1	66.1	86.1	94.3	73.9	0.52	0.59	0.38	0.50	0.59	0.56	0.883017	1.000000	-
Rv1510	-	22	321.2	295.4	294.0	302.7	315.9	282.0	0.126	0.007	0.000	0.042	0.102	-0.059	341.9	309.4	300.8	317.1	330.9	295.4	0.94	0.95	0.98	0.95	0.95	0.95	0.989655	1.000000	-
Rv1511	gmdA	19	233.5	252.9	223.0	242.8	248.7	227.8	0.065	0.178	0.000	0.120	0.154	0.030	246.5	267.0	249.2	271.4	262.5	240.4	0.95	0.95	0.89	0.89	0.95	0.95	0.959769	1.000000	-
Rv1512	epiA	11	25.4	40.8	31.8	30.9	46.0	22.2	-0.273	0.317	0.000	-0.037	0.471	-0.435	40.0	47.3	50.0	48.5	63.3	27.2	0.64	0.86	0.64	0.64	0.73	0.82	0.030810	0.333150	-
Rv1513	-	7	47.2	41.4	48.7	35.5	49.0	51.6	-0.041	-0.209	0.000	-0.407	0.008	0.078	55.0	52.7	56.8	46.6	52.8	72.3	0.86	0.79	0.86	0.76	0.93	0.71	0.590970	1.000000	-
Rv1514c	-	17	56.1	57.7	65.8	41.0	54.7	63.6	-0.212	-0.175	0.000	-0.622	-0.246	-0.045	65.0	67.6	82.8	52.2	74.3	83.1	0.86	0.85	0.79	0.78	0.74	0.76	0.086275	0.684368	-
Rv1515c	-	15	43.5	57.9	42.6	53.9	40.0	55.5	0.028	0.403	0.000	0.308	-0.080	0.347	63.2	82.8	71.0	69.3	57.2	72.5	0.69	0.70	0.60	0.78	0.70	0.77	0.894365	1.000000	-
Rv1516c	-	11	52.0	54.6	51.0	48.5	42.8	49.6	0.025	0.090	0.000	-0.067	-0.227	-0.036	74.6	70.7	70.1	64.0	55.4	54.6	0.70	0.77	0.73	0.76	0.77	0.91	0.911837	1.000000	-
Rv1517	-	13	61.9	51.1	58.0	73.4	68.0	69.1	0.088	-0.168	0.000	0.316	0.212	0.234	89.5	73.8	83.7	102.2	117.8	105.6	0.69	0.69	0.69	0.72	0.58	0.65	0.735418	1.000000	-
Rv1518	-	11	118.8	101.8	107.8	86.5	85.7	102.3	0.134	-0.078	0.000	-0.302	-0.314	-0.071	130.7	112.0	124.8	98.4	94.3	112.6	0.91	0.91	0.86	0.88	0.91	0.91	0.984719	1.000000	-
Rv1519	-	2	306.7	219.3	310.5	209.3	246.9	226.3	-0.018	-0.492	0.000	-0.558	-0.325	-0.448	306.7	219.3	310.5	209.3	246.9	226.3	1.00	1.00	1.00	1.00	1.00	1.00	0.555967	1.000000	-
Rv1520	-	20	80.8	103.8	91.0	79.9	81.9	83.5	-0.163	0.181	0.000	-0.177	-0.144	-0.118	95.0	112.2	104.0	88.8	91.0	92.7	0.85	0.93	0.88	0.90	0.90	0.90	0.948227	1.000000	-
Rv1521	fadD25	35	78.4	92.6	75.4	83.7	84.0	101.4	0.053	0.279	0.000	0.141	0.146	0.404	91.5	101.2	94.2	95.5	91.8	102.8	0.86	0.91	0.80	0.88	0.91	0.99	0.096752	0.727377	-
Rv1522c	mmpL12	46	134.4	148.6	123.3	151.4	139.5	143.2	0.119	0.259	0.000	0.286	0.171	0.208	189.2	170.8	169.3	181.7	164.6	173.3	0.71	0.87	0.73	0.83	0.85	0.83	0.437758	1.000000	-
Rv1523	-	15	95.3	108.8	80.0	80.5	93.8	115.1	0.239	0.421	0.000	0.007	0.216	0.499	126.2	130.6	100.0	106.5	112.5	132.8	0.76	0.83	0.80	0.76	0.83	0.87	0.948512	1.000000	-
Rv1524	-	12	86.5	86.2	97.3	123.7	110.5	113.9	-0.162	-0.166	0.000	0.330	0.175	0.216	115.3	108.9	101.6	153.5	126.3	124.2	0.75	0.79	0.96	0.81	0.88	0.92	0.168670	0.995549	-
Rv1525	wbbL2	20	38.7	30.1	28.2	30.2	37.6	32.3	0.396	0.078	0.000	0.085	0.360	0.168	66.3	42.9	49.1	46.5	53.8	49.7	0.58	0.70	0.57	0.65	0.70	0.65	0.803426	1.000000	-
Rv1526c	-	18	136.4	149.5	154.0	156.6	113.3	121.1	-0.169	-0.042	0.000	0.024	-0.426	-0.334	179.7	185.5	184.8	172.6	140.7	189.6	0.76	0.81	0.83	0.91	0.81	0.64	0.194165	1.000000	-
Rv1527c	pks5	86	112.6	107.6	116.2	109.3	107.4	103.8	-0.043	-0.107	0.000	-0.085	-0.109	-0.155	130.3	126.7	140.8	124.8	124.0	121.5	0.86	0.85	0.83	0.88	0.87	0.85	0.950739	1.000000	-
Rv1528c	papA4	7	256.5	227.0	242.4	229.0	263.8	203.9	0.080	-0.093	0.000	-0.080	0.120	-0.244	256.5	227.0	242.4	229.0	263.8	203.9	1.00	1.00	1.00	1.00	1.00	1.00	0.876347	1.000000	-
Rv1529	fadD24	33	79.9	61.0	79.0	74.3	76.0	70.3	0.014	-0.349	0.000	-0.084	-0.052	-0.158	94.1	78.9	89.9	86.5	83.6	82.9	0.85	0.77	0.88	0.86	0.91	0.85	0.740305	1.000000	-
Rv1530	adh	21	55.8	67.5	55.6	57.3	60.3	57.2	0.005	0.259	0.000	0.040	0.109	0.037	81.8	91.4	89.8	73.7	74.5	70.6	0.68	0.74	0.62	0.78	0.81	0.81	0.842166	1.000000	-
Rv1531	-	8	66.6	70.6	120.8	65.8	69.1	74.9	-0.813	-0.735	0.000	-0.829	-0.763	-0.654	88.8	94.1	138.0	79.0	92.2	92.2	0.75	0.75	0.88	0.83	0.75	0.81	0.754484	1.000000	-
Rv1532c	-	4	66.9	124.6	125.0	165.0	105.1	99.8	-0.855	-0.005	0.000	0.387	-0.239	-0.311	72.9	124.6	166.7	165.0	105.1	114.0	0.92	1.00	0.75	1.00	1.00	0.88	0.274175	1.000000	-
Rv1533	-	10	85.1	81.9	74.9	78.8	77.9	92.8	0.173	0.122	0.000	0.070	0.054	0.292	106.3	96.4	93.6	87.6	97.4	109.2	0.80	0.85	0.80	0.90	0.80	0.85	0.979359	1.000000	-
Rv1534	-	16	112.9	141.6	153.2	138.1	132.7	128.6	-0.424	-0.110	0.000	-0.145	-0.200	-0.244	123.2	146.2	153.2	138.1	137.0	128.6	0.92	0.97	1.00	1.00	0.97	1.00	0.275364	1.000000	-
Rv1535	-	4	82.3	79.8	71.1	94.3	90.2	106.4	0.197	0.156	0.000	0.384	0.323	0.549	82.3	79.8	71.1	94.3	90.2	106.4	1.00	1.00	1.00	1.00	1.00	1.00	0.223396	1.000000	-
Rv1536	ileS	72	0.0	0.0	0.0	0.1	0.0	0.0	0.000	0.000	0.000	0.020	0.000	0.000	0.0	0.0	0.0	14.8	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1537	dinX	13	109.1	151.1	135.2	125.0	116.1	160.5	-0.298	0.155	0.000	-0.109	-0.211	0.239	132.9	157.2	152.9	139.3	120.8	181.4	0.82	0.96	0.88	0.90	0.96	0.88	0.676627	1.000000	-
Rv1538c	ansA	14	249.8	241.5	253.5	216.9	192.0	237.1	-0.021	-0.069	0.000	-0.220	-0.392	-0.095	249.8	260.0	273.0	227.8	206.8	237.1	1.00	0.93	0.93	0.95	0.93	1.00	0.460824	1.000000	-
Rv1539	lspA	8	35.1	51.4	43.7	37.4	67.5	32.3	-0.281	0.212	0.000	-0.201	0.574	-0.384	76.5	74.8	99.9	64.1	83.1	47.0	0.46	0.69	0.44	0.58	0.81	0.69	0.515864	1.000000	-
Rv1540	-	12	3.5	13.6	23.4	35.0	25.0	12.7	-1.741	-0.614	0.000	0.495	0.076	-0.687	21.0	18.1	37.5	50.4	33.3	19.0	0.17	0.75	0.62	0.69	0.75	0.67	0.000000	0.000000	-
Rv1541c	lprI	9	177.0	210.4	171.1	169.0	170.9	179.4	0.047	0.290	0.000	-0.018	-0.002	0.066	183.8	210.4	181.2	175.5	170.9	179.4	0.96	1.00	0.94	0.96	1.00	1.00	0.955058	1.000000	-
Rv1542c	glbN	7	193.0	152.5	157.7	152.3	178.0	201.4	0.283	-0.047	0.000	-0.049	0.169	0.343	193.0	152.5	157.7	152.3	178.0	201.4	1.00	1.00	1.00	1.00	1.00	1.00	0.681071	1.000000	-
Rv1543	-	14	74.6	111.1	76.9	105.3	91.6	103.0	-0.041	0.504	0.000	0.429	0.238	0.399	111.9	124.5	107.7	142.6	116.6	120.2	0.67	0.89	0.71	0.74	0.79	0.86	0.726268	1.000000	-
Rv1544	-	11	159.6	159.2	170.3	155.3	148.0	172.8	-0.091	-0.095	0.000	-0.130	-0.196	0.020	195.1	175.1	178.4	170.8	162.8	172.8	0.82	0.91	0.95	0.91	0.91	1.00	0.738801	1.000000	-
Rv1545	-	3	208.4	251.8	259.0	248.2	271.2	290.9	-0.307	-0.040	0.000	-0.060	0.065	0.165	312.5	377.7	259.0	279.2	271.2	436.3	0.67	0.67	1.00	0.89	1.00	0.67	0.306004	1.000000	-
Rv1546	-	3	348.0	477.1	364.3	304.3	385.0	351.2	-0.065	0.384	0.000	-0.256	0.079	-0.052	348.0	477.1	364.3	304.3	385.0	351.2	1.00	1.00	1.00	1.00	1.00	1.00	0.749647	1.000000	-
Rv1547	dnaE	45	0.1	0.1	0.0	0.0	0.0	0.0	0.035	0.033	0.000	0.000	0.000	0.000	16.4	10.4	0.0	0.0	0.0	0.0	0.01	0.01	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1548c	PPE21	41	46.6	50.6	46.8	47.0	47.5	51.5	-0.005	0.103	0.000	0.007	0.021	0.127	106.1	88.3	112.8	103.2	99.9	98.2	0.44	0.57	0.41	0.46	0.48	0.52	0.944764	1.000000	-
Rv1549	fadD11.1	9	161.9	167.0	213.0	158.1	178.2	189.2	-0.386	-0.342	0.000	-0.419	-0.251	-0.167	218.5	231.2	273.9	158.1	229.1	243.2	0.74	0.72	0.78	1.00	0.78	0.78	0.022521	0.259706	-
Rv1550	fadD11	25	135.3	136.2	145.9	108.8	115.1	152.6	-0.106	-0.097	0.000	-0.407	-0.330	0.063	161.0	154.7	178.0	140.7	137.0	162.4	0.84	0.88	0.82	0.77	0.84	0.94	0.597437	1.000000	-
Rv1551	plsB1	29	129.4	144.8	138.1	137.4	127.4	127.5	-0.090	0.066	0.000	-0.007	-0.112	-0.111	148.1	152.7	160.2	140.6	131.9	145.0	0.87	0.95	0.86	0.98	0.97	0.88	0.231917	1.000000	-
Rv1552	frdA	34	67.7	84.3	66.9	70.4	70.3	75.4	0.015	0.312	0.000	0.068	0.065	0.160	83.2	98.8	79.9	86.5	83.8	98.6	0.81	0.85	0.84	0.81	0.84	0.76	0.556930	1.000000	-
Rv1553	frdB	13	117.9	122.5	121.4	133.5	112.6	129.8	-0.041	0.012	0.000	0.131	-0.105	0.093	135.2	138.4	137.2	148.7	127.2	140.6	0.87	0.88	0.88	0.90	0.88	0.92	0.999805	1.000000	-
Rv1554	frdC	9	174.4	170.2	160.9	169.8	162.5	152.2	0.113	0.079	0.000	0.076	0.014	-0.078	204.7	191.5	160.9	169.8	182.8	152.2	0.85	0.89	1.00	1.00	0.89	1.00	0.181939	1.000000	-
Rv1555	frdD	3	155.2	145.7	88.7	134.9	124.4	155.9	0.773	0.686	0.000	0.578	0.466	0.779	155.2	145.7	88.7	134.9	124.4	155.9	1.00	1.00	1.00	1.00	1.00	1.00	0.168092	0.995413	-
Rv1556	-	11	151.5	191.2	160.0	166.9	175.4	161.1	-0.076	0.250	0.000	0.059	0.129	0.010	156.3	210.3	176.0	172.1	175.4	177.2	0.97	0.91	0.91	0.97	1.00	0.91	0.661164	1.000000	-
Rv1557	mmpL6	19	125.6	130.5	146.6	123.9	126.9	144.5	-0.215	-0.163	0.000	-0.235	-0.201	-0.021	135.1	154.9	154.8	138.5	141.8	144.5	0.93	0.84	0.95	0.89	0.89	1.00	0.277594	1.000000	-
Rv1558	-	8	353.8	332.2	335.9	310.2	284.8	247.9	0.074	-0.016	0.000	-0.113	-0.234	-0.431	369.2	332.2	335.9	310.2	284.8	247.9	0.96	1.00	1.00	1.00	1.00	1.00	0.923010	1.000000	-
Rv1559	ilvA	23	150.1	152.2	143.9	148.6	119.6	139.3	0.058	0.078	0.000	0.045	-0.258	-0.046	167.0	170.7	174.2	173.8	137.5	149.0	0.90	0.89	0.83	0.86	0.87	0.93	0.907116	1.000000	-
Rv1560	-	2	46.1	41.0	64.2	58.1	46.0	54.9	-0.438	-0.589	0.000	-0.134	-0.442	-0.210	55.3	41.0	64.2	58.1	46.0	109.7	0.83	1.00	1.00	1.00	1.00	0.50	0.209658	1.000000	-
Rv1561	-	9	110.2	97.1	76.8	104.1	97.4	88.6	0.494	0.320	0.000	0.416	0.324	0.195	110.2	97.1	76.8	104.1	97.4	88.6	1.00	1.00	1.00	1.00	1.00	1.00	0.372382	1.000000	-
Rv1562c	treZ	30	59.9	58.1	61.2	62.7	61.7	56.0	-0.027	-0.067	0.000	0.033	0.012	-0.117	89.9	87.2	87.4	86.8	77.2	80.0	0.67	0.67	0.70	0.72	0.80	0.70	0.971336	1.000000	-
Rv1563c	treY	31	47.9	45.0	64.4	50.1	56.2	50.7	-0.391	-0.473	0.000	-0.331	-0.182	-0.317	70.7	75.4	90.7	70.7	75.7	87.3	0.68	0.60	0.71	0.71	0.74	0.58	0.124008	0.840057	-
Rv1564c	treX	42	59.1	56.7	54.5	57.0	59.4	55.7	0.109	0.055	0.000	0.061	0.115	0.029	81.0	85.1	80.2	84.5	83.2	69.8	0.73	0.67	0.68	0.67	0.71	0.80	0.678263	1.000000	-
Rv1565c	-	41	58.5	50.9	62.9	34.4	36.5	31.0	-0.098	-0.282	0.000	-0.786	-0.712	-0.915	78.2	66.2	83.2	47.5	46.7	42.4	0.75	0.77	0.76	0.72	0.78	0.73	0.000000	0.000017	-
Rv1566c	-	10	164.8	280.4	226.0	331.1	340.3	309.2	-0.444	0.305	0.000	0.541	0.580	0.444	183.1	280.4	265.9	354.7	378.1	343.6	0.90	1.00	0.85	0.93	0.90	0.90	0.000342	0.007764	-
Rv1567c	-	8	85.2	100.0	88.5	99.3	94.3	117.6	-0.051	0.168	0.000	0.158	0.087	0.391	97.4	114.3	101.1	99.3	94.3	117.6	0.88	0.88	0.88	1.00	1.00	1.00	0.385346	1.000000	-
Rv1568	bioA	15	179.3	224.3	212.9	203.1	187.5	142.1	-0.241	0.074	0.000	-0.066	-0.179	-0.567	206.9	224.3	236.5	228.5	200.9	163.9	0.87	1.00	0.90	0.89	0.93	0.87	0.484233	1.000000	-
Rv1569	bioF1	7	268.7	205.2	278.4	221.6	216.5	221.9	-0.050	-0.431	0.000	-0.322	-0.356	-0.321	268.7	239.4	278.4	258.6	252.6	258.9	1.00	0.86	1.00	0.86	0.86	0.86	0.442314	1.000000	-
Rv1570	bioD	2	88.6	87.5	79.7	71.8	94.2	61.7	0.143	0.127	0.000	-0.143	0.228	-0.346	132.8	87.5	159.4	143.5	125.6	61.7	0.67	1.00	0.50	0.50	0.75	1.00	0.495500	1.000000	-
Rv1571	-	2	68.7	148.4	50.2	89.4	70.4	33.8	0.417	1.476	0.000	0.775	0.451	-0.507	68.7	148.4	100.3	89.4	93.9	67.7	1.00	1.00	0.50	1.00	0.75	0.50	0.183426	1.000000	-
Rv1572c	-	1	3.9	15.1	28.1	14.1	11.8	34.4	-1.900	-0.716	0.000	-0.796	-0.983	0.251	11.6	15.1	28.1	14.1	11.8	34.4	0.33	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1573	-	1	176.6	116.9	112.4	37.1	0.0	76.4	0.630	0.055	0.000	-1.479	-4.553	-0.529	176.6	116.9	112.4	37.1	0.0	76.4	1.00	1.00	1.00	1.00	0.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1574	-	2	62.3	58.6	79.7	72.4	61.0	76.6	-0.332	-0.414	0.000	-0.130	-0.361	-0.055	93.5	58.6	79.7	72.4	61.0	76.6	0.67	1.00	1.00	1.00	1.00	1.00	0.716732	1.000000	-
Rv1575	-	10	35.6	31.1	31.6	49.4	25.6	28.3	0.149	-0.021	0.000	0.571	-0.261	-0.137	66.7	44.4	63.2	74.1	56.8	47.1	0.53	0.70	0.50	0.67	0.45	0.60	0.638495	1.000000	-
Rv1576c	-	7	3.0	11.0	13.8	18.3	7.7	2.0	-1.243	-0.235	0.000	0.308	-0.565	-1.426	15.6	38.5	48.4	48.1	21.7	28.2	0.19	0.29	0.29	0.38	0.36	0.07	0.067691	0.585875	-
Rv1577c	-	7	9.0	30.5	25.5	21.3	35.2	19.3	-1.117	0.220	0.000	-0.215	0.399	-0.328	21.1	47.4	51.0	44.7	44.8	38.6	0.43	0.64	0.50	0.48	0.79	0.50	0.191940	1.000000	-
Rv1578c	-	4	81.5	88.1	50.2	76.0	96.3	57.2	0.649	0.755	0.000	0.553	0.877	0.172	81.5	88.1	66.9	76.0	128.5	65.4	1.00	1.00	0.75	1.00	0.75	0.88	0.054892	0.502336	-
Rv1579c	-	4	7.1	31.8	28.8	16.3	33.8	30.9	-1.480	0.124	0.000	-0.665	0.198	0.086	17.1	31.8	28.8	21.8	38.6	35.3	0.42	1.00	1.00	0.75	0.88	0.88	0.004338	0.069519	-
Rv1580c	-	4	105.0	166.7	111.8	120.9	144.6	145.7	-0.087	0.555	0.000	0.108	0.357	0.368	105.0	166.7	127.8	120.9	144.6	145.7	1.00	1.00	0.88	1.00	1.00	1.00	0.762548	1.000000	-
Rv1581c	-	6	79.8	75.7	51.0	44.6	76.5	57.4	0.597	0.526	0.000	-0.177	0.541	0.155	95.7	75.7	55.7	50.1	102.1	57.4	0.83	1.00	0.92	0.89	0.75	1.00	0.076512	0.632052	-
Rv1582c	-	29	30.9	28.1	35.8	31.6	30.9	45.6	-0.186	-0.302	0.000	-0.158	-0.185	0.312	55.9	47.9	62.9	48.2	46.0	63.0	0.55	0.59	0.57	0.66	0.67	0.72	0.597967	1.000000	-
Rv1583c	-	5	109.1	79.2	133.7	106.7	126.3	89.6	-0.282	-0.720	0.000	-0.312	-0.080	-0.552	109.1	79.2	133.7	106.7	126.3	89.6	1.00	1.00	1.00	1.00	1.00	1.00	0.532643	1.000000	-
Rv1584c	-	3	254.7	345.6	341.6	428.1	364.4	281.8	-0.416	0.016	0.000	0.321	0.092	-0.273	286.6	414.7	409.9	642.1	364.4	338.2	0.89	0.83	0.83	0.67	1.00	0.83	0.681638	1.000000	-
Rv1585c	-	8	66.3	52.2	51.7	61.3	57.9	45.8	0.332	0.014	0.000	0.226	0.150	-0.157	99.5	92.9	68.9	98.1	92.6	81.5	0.67	0.56	0.75	0.62	0.62	0.56	0.869197	1.000000	-
Rv1586c	-	20	101.2	100.9	121.4	126.3	101.4	92.1	-0.251	-0.256	0.000	0.055	-0.249	-0.380	123.9	109.1	138.8	133.0	115.9	108.4	0.82	0.93	0.88	0.95	0.88	0.85	0.682814	1.000000	-
Rv1587c	-	13	82.8	100.2	95.7	103.5	84.9	109.7	-0.198	0.063	0.000	0.108	-0.163	0.189	124.1	144.7	138.2	149.5	122.7	158.5	0.67	0.69	0.69	0.69	0.69	0.69	0.997485	1.000000	-
Rv1588c	-	8	236.1	184.3	227.0	212.2	216.8	224.7	0.055	-0.293	0.000	-0.095	-0.065	-0.015	236.1	226.9	227.0	242.5	247.8	256.8	1.00	0.81	1.00	0.88	0.88	0.88	0.304807	1.000000	-
Rv1589	bioB	9	213.0	162.2	147.4	198.8	204.9	201.3	0.516	0.133	0.000	0.419	0.461	0.437	213.0	182.5	176.9	198.8	230.5	241.6	1.00	0.89	0.83	1.00	0.89	0.83	0.096801	0.727377	-
Rv1590	-	3	330.7	247.8	341.4	363.5	310.4	263.5	-0.045	-0.454	0.000	0.089	-0.135	-0.368	330.7	247.8	341.4	363.5	310.4	263.5	1.00	1.00	1.00	1.00	1.00	1.00	0.954492	1.000000	-
Rv1591	-	8	299.3	249.4	203.2	210.9	235.3	240.6	0.547	0.289	0.000	0.053	0.207	0.238	342.0	285.0	250.1	241.1	289.6	296.1	0.88	0.88	0.81	0.88	0.81	0.81	0.979323	1.000000	-
Rv1592c	-	24	133.1	18.1	179.7	1.0	5.2	8.0	-0.420	-2.996	0.000	-4.956	-4.186	-3.825	140.9	28.1	200.6	17.1	19.0	16.8	0.94	0.65	0.90	0.06	0.27	0.48	0.000000	0.000000	-
Rv1593c	-	11	171.1	139.5	204.7	160.9	157.6	147.3	-0.252	-0.537	0.000	-0.337	-0.367	-0.462	171.1	139.5	214.4	166.0	157.6	162.0	1.00	1.00	0.95	0.97	1.00	0.91	0.479818	1.000000	-
Rv1594	nadA	10	0.0	0.5	1.3	0.0	0.0	0.0	-0.324	-0.187	0.000	-0.324	-0.324	-0.324	0.0	10.0	12.6	0.0	0.0	0.0	0.00	0.05	0.10	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1595	nadB	23	0.6	1.3	1.4	2.2	3.8	1.1	-0.192	-0.006	0.000	0.183	0.461	-0.059	13.2	20.6	15.7	38.5	34.7	17.1	0.04	0.07	0.09	0.06	0.11	0.07	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1596	nadC	12	1.2	3.8	0.5	7.8	18.5	1.4	0.174	0.674	0.000	1.208	2.089	0.201	14.8	18.3	12.6	28.0	34.2	10.8	0.08	0.21	0.04	0.28	0.54	0.12	0.000136	0.003424	-
Rv1597	-	12	219.7	227.4	203.3	170.8	192.8	197.1	0.109	0.158	0.000	-0.245	-0.075	-0.044	219.7	227.4	203.3	186.3	201.2	205.6	1.00	1.00	1.00	0.92	0.96	0.96	0.464653	1.000000	-
Rv1598c	-	8	122.1	156.1	128.0	127.8	144.6	150.6	-0.066	0.276	0.000	-0.002	0.169	0.227	139.5	178.4	146.3	139.5	165.2	172.2	0.88	0.88	0.88	0.92	0.88	0.88	0.969269	1.000000	-
Rv1599	hisD	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1600	hisC1	24	0.0	0.2	0.0	0.2	0.0	0.0	0.000	0.059	0.000	0.051	0.000	0.000	0.0	10.0	0.0	13.0	0.0	0.0	0.00	0.02	0.00	0.01	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1601	hisB	14	0.0	0.0	0.0	0.0	0.0	0.3	0.000	0.000	0.000	0.000	0.000	0.094	0.0	0.0	0.0	0.0	0.0	9.4	0.00	0.00	0.00	0.00	0.00	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1602	hisH	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1603	hisA	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1604	impA	11	30.8	38.4	33.6	56.9	41.7	63.0	-0.107	0.170	0.000	0.682	0.276	0.817	40.7	49.7	41.1	64.7	48.3	69.3	0.76	0.77	0.82	0.88	0.86	0.91	0.019961	0.234251	-
Rv1605	hisF	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1606	hisI	7	0.6	0.0	0.0	0.7	0.0	0.0	0.151	0.000	0.000	0.190	0.000	0.000	11.6	0.0	0.0	14.8	0.0	0.0	0.05	0.00	0.00	0.05	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1607	chaA	9	139.1	128.6	137.1	137.6	139.2	146.1	0.020	-0.089	0.000	0.005	0.021	0.088	139.1	128.6	145.2	137.6	139.2	146.1	1.00	1.00	0.94	1.00	1.00	1.00	0.943999	1.000000	-
Rv1608c	bcpB	6	50.2	59.6	52.7	62.6	82.7	83.4	-0.064	0.163	0.000	0.230	0.605	0.617	56.4	71.5	63.2	75.2	82.7	91.0	0.89	0.83	0.83	0.83	1.00	0.92	0.713993	1.000000	-
Rv1609	trpE	25	0.0	0.0	0.0	0.0	0.5	0.0	0.000	0.000	0.000	0.000	0.130	0.000	0.0	0.0	0.0	0.0	11.8	0.0	0.00	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1610	-	5	0.8	5.1	3.8	0.0	1.8	2.2	-0.605	0.206	0.000	-0.812	-0.369	-0.294	11.6	12.8	18.9	0.0	9.0	10.8	0.07	0.40	0.20	0.00	0.20	0.20	0.285441	1.000000	-
Rv1611	trpC	10	0.0	0.0	0.0	0.0	0.0	0.5	0.000	0.000	0.000	0.000	0.000	0.148	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1612	trpB	18	0.0	0.0	0.0	0.3	0.0	0.0	0.000	0.000	0.000	0.077	0.000	0.000	0.0	0.0	0.0	14.8	0.0	0.0	0.00	0.00	0.00	0.02	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1613	trpA	16	0.0	0.0	0.0	0.0	0.0	0.3	0.000	0.000	0.000	0.000	0.000	0.094	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1614	lgt	23	30.9	29.5	30.4	29.6	22.0	23.3	0.021	-0.037	0.000	-0.032	-0.392	-0.321	355.4	339.1	349.5	291.9	202.1	268.4	0.09	0.09	0.09	0.10	0.11	0.09	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1615	-	8	135.1	192.3	136.3	113.3	134.7	129.7	-0.013	0.481	0.000	-0.256	-0.017	-0.069	147.4	256.4	136.3	113.3	134.7	129.7	0.92	0.75	1.00	1.00	1.00	1.00	0.010817	0.146301	-
Rv1616	-	9	138.1	152.0	164.5	149.6	152.0	181.0	-0.245	-0.111	0.000	-0.133	-0.111	0.134	149.1	171.0	185.1	161.5	171.0	181.0	0.93	0.89	0.89	0.93	0.89	1.00	0.815781	1.000000	-
Rv1617	pykA	13	13.3	23.1	6.2	6.5	8.6	18.8	0.708	1.323	0.000	0.041	0.278	1.084	34.7	31.6	26.9	21.3	22.4	30.5	0.38	0.73	0.23	0.31	0.38	0.62	0.012623	0.165678	-
Rv1618	tesB1	15	164.0	167.5	186.8	196.8	182.1	146.3	-0.182	-0.153	0.000	0.073	-0.036	-0.342	180.0	173.3	207.6	210.9	195.1	156.8	0.91	0.97	0.90	0.93	0.93	0.93	0.984431	1.000000	-
Rv1619	-	23	88.5	66.7	83.2	78.0	103.2	57.3	0.085	-0.299	0.000	-0.087	0.296	-0.502	105.3	80.7	112.5	91.3	128.3	77.5	0.84	0.83	0.74	0.86	0.80	0.74	0.146047	0.930896	-
Rv1620c	cydC	18	133.3	90.2	110.6	124.7	115.5	104.5	0.258	-0.281	0.000	0.166	0.059	-0.079	144.0	98.4	137.4	134.7	138.6	104.5	0.93	0.92	0.81	0.93	0.83	1.00	0.066733	0.580095	-
Rv1621c	cydD	20	144.9	112.1	130.7	118.0	142.6	137.2	0.143	-0.212	0.000	-0.142	0.122	0.067	164.0	131.9	137.6	133.6	163.0	148.3	0.88	0.85	0.95	0.88	0.88	0.93	0.756838	1.000000	-
Rv1622c	cydB	20	131.4	143.7	162.6	164.0	145.2	145.9	-0.297	-0.172	0.000	0.012	-0.158	-0.151	151.6	169.1	185.8	182.2	152.8	162.1	0.87	0.85	0.88	0.90	0.95	0.90	0.933892	1.000000	-
Rv1623c	cydA	18	129.9	131.9	138.2	116.7	144.7	144.2	-0.086	-0.066	0.000	-0.235	0.064	0.059	152.5	148.4	171.6	134.0	162.8	152.7	0.85	0.89	0.81	0.87	0.89	0.94	0.942917	1.000000	-
Rv1624c	-	5	11.7	20.3	25.6	16.8	16.8	24.0	-0.870	-0.273	0.000	-0.486	-0.490	-0.075	22.0	29.0	42.6	25.2	21.0	30.0	0.53	0.70	0.60	0.67	0.80	0.80	0.326876	1.000000	-
Rv1625c	cya	29	243.7	240.0	236.6	248.7	239.1	222.5	0.042	0.020	0.000	0.071	0.015	-0.087	275.3	267.6	263.9	281.0	261.7	230.4	0.89	0.90	0.90	0.89	0.91	0.97	0.950457	1.000000	-
Rv1626	-	5	192.0	102.2	200.3	101.3	108.8	137.4	-0.059	-0.937	0.000	-0.949	-0.851	-0.527	192.0	102.2	200.3	101.3	108.8	137.4	1.00	1.00	1.00	1.00	1.00	1.00	0.001362	0.026384	-
Rv1627c	-	17	97.4	102.9	124.6	109.0	110.6	102.2	-0.340	-0.265	0.000	-0.185	-0.164	-0.273	130.7	120.6	184.1	142.5	139.3	139.1	0.75	0.85	0.68	0.76	0.79	0.74	0.745534	1.000000	-
Rv1628c	-	7	45.8	38.2	26.4	58.7	34.9	29.7	0.695	0.463	0.000	1.021	0.348	0.146	80.1	53.5	61.5	94.7	69.9	37.8	0.57	0.71	0.43	0.62	0.50	0.79	0.615565	1.000000	-
Rv1629	polA	38	18.7	21.9	23.9	20.0	25.9	21.9	-0.288	-0.106	0.000	-0.209	0.097	-0.105	62.7	55.4	62.7	61.7	58.0	59.4	0.30	0.39	0.38	0.32	0.45	0.37	0.960336	1.000000	-
Rv1630	rpsA	14	0.9	1.5	0.0	4.4	1.4	2.5	0.250	0.372	0.000	0.911	0.346	0.576	19.9	10.3	0.0	30.8	19.0	17.2	0.05	0.14	0.00	0.14	0.07	0.14	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1631	coaE	11	12.4	21.6	16.2	31.0	25.3	17.4	-0.278	0.332	0.000	0.766	0.519	0.080	68.5	59.5	118.5	92.9	92.9	63.7	0.18	0.36	0.14	0.33	0.27	0.27	0.784004	1.000000	-
Rv1632c	-	10	79.5	74.3	66.1	85.7	73.6	88.1	0.250	0.157	0.000	0.351	0.144	0.389	88.4	82.5	82.6	95.2	81.7	88.1	0.90	0.90	0.80	0.90	0.90	1.00	0.815270	1.000000	-
Rv1633	uvrB	38	197.2	189.8	204.3	201.7	206.7	201.9	-0.049	-0.104	0.000	-0.018	0.017	-0.017	212.1	212.1	218.7	207.2	224.5	207.3	0.93	0.89	0.93	0.97	0.92	0.97	0.523102	1.000000	-
Rv1634	-	27	321.9	289.1	300.1	327.5	317.7	263.7	0.099	-0.053	0.000	0.124	0.081	-0.184	326.0	289.1	300.1	327.5	323.7	268.6	0.99	1.00	1.00	1.00	0.98	0.98	0.783151	1.000000	-
Rv1635c	-	28	185.6	189.0	185.6	189.1	187.7	205.8	0.000	0.025	0.000	0.026	0.016	0.145	190.2	192.5	185.6	189.1	187.7	205.8	0.98	0.98	1.00	1.00	1.00	1.00	0.671134	1.000000	-
Rv1636	TB15.3	7	395.6	110.7	502.2	70.7	123.1	79.6	-0.341	-2.133	0.000	-2.745	-1.985	-2.584	461.5	129.1	540.9	123.7	143.6	101.3	0.86	0.86	0.93	0.57	0.86	0.79	0.000000	0.000000	-
Rv1637c	-	10	287.9	268.7	274.3	263.6	249.3	263.1	0.068	-0.029	0.000	-0.057	-0.135	-0.059	287.9	268.7	304.8	263.6	249.3	263.1	1.00	1.00	0.90	1.00	1.00	1.00	0.660099	1.000000	-
Rv1638	uvrA	37	127.3	115.9	142.0	125.0	128.9	124.3	-0.152	-0.282	0.000	-0.178	-0.135	-0.185	155.3	129.9	164.2	140.1	142.3	141.5	0.82	0.89	0.86	0.89	0.91	0.88	0.963841	1.000000	-
Rv1638A	-	5	17.5	31.4	17.5	25.0	22.9	28.8	-0.004	0.693	0.000	0.411	0.309	0.584	37.4	52.4	43.8	46.8	38.2	41.1	0.47	0.60	0.40	0.53	0.60	0.70	0.988396	1.000000	-
Rv1639c	-	13	139.4	131.6	120.2	105.2	120.8	127.0	0.207	0.126	0.000	-0.183	0.007	0.077	155.4	155.5	142.0	117.3	142.7	157.2	0.90	0.85	0.85	0.90	0.85	0.81	0.872270	1.000000	-
Rv1640c	lysS	59	83.2	106.2	84.2	125.0	124.0	95.8	-0.018	0.317	0.000	0.543	0.531	0.176	98.8	112.9	98.4	140.1	139.3	107.7	0.84	0.94	0.86	0.89	0.89	0.89	0.000042	0.001157	-
Rv1641	infC	11	0.0	0.0	0.0	0.0	1.2	0.0	0.000	0.000	0.000	0.000	0.317	0.000	0.0	0.0	0.0	0.0	27.0	0.0	0.00	0.00	0.00	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1642	rpmI	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1643	rplT	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1644	tsnR	10	208.4	168.4	183.7	201.4	186.4	171.4	0.177	-0.122	0.000	0.129	0.020	-0.097	208.4	168.4	193.4	208.3	186.4	171.4	1.00	1.00	0.95	0.97	1.00	1.00	0.887821	1.000000	-
Rv1645c	-	23	162.9	195.1	159.8	179.9	171.5	189.6	0.027	0.280	0.000	0.166	0.099	0.240	178.4	208.7	188.5	193.9	171.5	207.7	0.91	0.93	0.85	0.93	1.00	0.91	0.369244	1.000000	-
Rv1646	PE17	15	172.4	190.8	158.6	189.5	175.6	170.9	0.117	0.259	0.000	0.250	0.143	0.105	194.0	204.4	176.2	193.8	188.1	183.1	0.89	0.93	0.90	0.98	0.93	0.93	0.961830	1.000000	-
Rv1647	-	9	209.4	179.9	174.6	170.7	148.4	182.3	0.255	0.041	0.000	-0.032	-0.228	0.061	226.2	202.3	196.5	192.1	157.1	182.3	0.93	0.89	0.89	0.89	0.94	1.00	0.942193	1.000000	-
Rv1648	-	12	242.1	213.9	225.2	271.2	235.7	223.0	0.103	-0.072	0.000	0.263	0.065	-0.014	242.1	213.9	225.2	271.2	235.7	223.0	1.00	1.00	1.00	1.00	1.00	1.00	0.870458	1.000000	-
Rv1649	pheS	13	0.0	0.0	0.0	0.0	0.3	0.0	0.000	0.000	0.000	0.000	0.097	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1650	pheT	33	0.2	0.0	0.0	0.0	0.0	0.0	0.047	0.000	0.000	0.000	0.000	0.000	16.4	0.0	0.0	0.0	0.0	0.0	0.01	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1651c	PE_PGRS30	44	153.9	153.4	166.2	161.8	157.1	139.4	-0.107	-0.112	0.000	-0.037	-0.078	-0.246	183.0	170.9	195.0	189.0	168.6	149.5	0.84	0.90	0.85	0.86	0.93	0.93	0.683787	1.000000	-
Rv1652	argC	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1653	argJ	3	45.2	11.9	29.0	45.9	26.8	10.1	0.560	-1.013	0.000	0.581	-0.099	-1.171	67.8	17.8	58.1	68.9	53.6	20.2	0.67	0.67	0.50	0.67	0.50	0.50	0.302552	1.000000	-
Rv1654	argB	4	0.0	0.0	0.0	0.0	0.0	1.2	0.000	0.000	0.000	0.000	0.000	0.305	0.0	0.0	0.0	0.0	0.0	9.4	0.00	0.00	0.00	0.00	0.00	0.12	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1655	argD	10	1.1	2.0	0.0	2.9	3.4	2.0	0.296	0.494	0.000	0.657	0.753	0.475	17.1	10.2	0.0	17.3	34.3	9.8	0.07	0.20	0.00	0.17	0.10	0.20	0.236879	1.000000	-
Rv1656	argF	5	0.0	0.0	3.1	0.0	0.0	0.0	-0.696	-0.696	0.000	-0.696	-0.696	-0.696	0.0	0.0	31.0	0.0	0.0	0.0	0.00	0.00	0.10	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1657	argR	3	450.4	404.2	419.2	350.1	279.7	299.3	0.103	-0.052	0.000	-0.257	-0.575	-0.479	675.6	606.3	628.7	450.1	419.5	449.0	0.67	0.67	0.67	0.78	0.67	0.67	0.999478	1.000000	-
Rv1658	argG	16	0.0	0.3	0.0	0.0	0.0	0.0	0.000	0.087	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.03	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1659	argH	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1660	pks10	9	176.6	196.7	198.2	212.2	208.1	153.2	-0.162	-0.010	0.000	0.096	0.069	-0.361	176.6	196.7	198.2	212.2	208.1	153.2	1.00	1.00	1.00	1.00	1.00	1.00	0.599591	1.000000	-
Rv1661	pks7	73	41.7	33.5	45.0	49.2	41.4	36.1	-0.100	-0.378	0.000	0.114	-0.108	-0.284	82.3	64.3	92.6	84.1	81.7	66.7	0.51	0.52	0.49	0.58	0.51	0.54	0.387736	1.000000	-
Rv1662	pks8	62	21.3	26.1	27.4	21.2	25.9	18.6	-0.300	-0.059	0.000	-0.305	-0.067	-0.453	46.6	44.3	49.9	42.4	40.7	34.5	0.46	0.59	0.55	0.50	0.64	0.54	0.212183	1.000000	-
Rv1663	pks17	17	64.0	45.8	50.2	40.2	57.2	57.9	0.323	-0.118	0.000	-0.286	0.172	0.189	79.6	62.3	65.6	55.5	69.4	67.9	0.80	0.74	0.76	0.73	0.82	0.85	0.843421	1.000000	-
Rv1664	pks9	42	55.8	60.3	69.4	61.7	52.3	54.1	-0.291	-0.188	0.000	-0.157	-0.377	-0.333	80.8	76.7	91.1	77.0	67.6	74.5	0.69	0.79	0.76	0.80	0.77	0.73	0.759482	1.000000	-
Rv1665	pks11	10	140.4	160.7	133.2	134.8	155.7	139.4	0.073	0.262	0.000	0.017	0.218	0.064	156.0	160.7	140.2	139.4	163.9	139.4	0.90	1.00	0.95	0.97	0.95	1.00	0.794349	1.000000	-
Rv1666c	cyp139	18	210.5	199.7	192.1	211.1	240.9	210.9	0.129	0.055	0.000	0.132	0.319	0.131	214.5	217.9	209.6	211.1	255.1	230.0	0.98	0.92	0.92	1.00	0.94	0.92	0.208150	1.000000	-
Rv1667c	-	9	136.7	147.9	188.8	118.2	139.7	164.6	-0.452	-0.342	0.000	-0.654	-0.421	-0.192	142.0	156.6	212.4	127.7	139.7	174.3	0.96	0.94	0.89	0.93	1.00	0.94	0.510984	1.000000	-
Rv1668c	-	12	117.8	125.1	133.1	103.7	95.3	93.2	-0.170	-0.086	0.000	-0.346	-0.462	-0.492	136.8	150.2	152.2	128.7	127.0	117.8	0.86	0.83	0.88	0.81	0.75	0.79	0.947767	1.000000	-
Rv1669	-	8	37.4	34.4	41.2	35.7	41.4	39.5	-0.121	-0.228	0.000	-0.181	0.008	-0.052	59.9	45.9	59.9	53.6	55.2	57.5	0.62	0.75	0.69	0.67	0.75	0.69	0.999411	1.000000	-
Rv1670	-	10	47.0	56.1	51.6	52.7	63.4	67.1	-0.123	0.110	0.000	0.027	0.272	0.350	52.2	62.3	68.8	60.8	74.5	67.1	0.90	0.90	0.75	0.87	0.85	1.00	0.234675	1.000000	-
Rv1671	-	13	39.9	42.0	49.1	63.0	40.1	43.5	-0.267	-0.202	0.000	0.330	-0.261	-0.155	53.7	57.5	67.1	74.4	49.7	56.6	0.74	0.73	0.73	0.85	0.81	0.77	0.706468	1.000000	-
Rv1672c	-	20	130.0	114.8	148.9	152.2	128.4	138.9	-0.188	-0.362	0.000	0.031	-0.206	-0.097	162.6	139.1	170.2	179.0	138.8	150.1	0.80	0.82	0.88	0.85	0.93	0.93	0.810425	1.000000	-
Rv1673c	-	13	108.3	88.3	100.0	108.1	104.9	93.7	0.110	-0.169	0.000	0.108	0.066	-0.089	132.0	91.9	113.0	124.0	113.6	97.4	0.82	0.96	0.88	0.87	0.92	0.96	0.724503	1.000000	-
Rv1674c	-	9	213.3	128.2	139.5	173.2	175.6	141.1	0.595	-0.118	0.000	0.302	0.321	0.015	274.3	164.8	193.2	222.6	243.1	181.4	0.78	0.78	0.72	0.78	0.72	0.78	0.977750	1.000000	-
Rv1675c	-	10	171.4	213.1	218.4	191.2	235.6	167.1	-0.341	-0.034	0.000	-0.187	0.107	-0.376	171.4	213.1	242.6	191.2	235.6	208.9	1.00	1.00	0.90	1.00	1.00	0.80	0.017115	0.210263	-
Rv1676	-	8	29.0	31.8	34.0	57.0	42.5	41.7	-0.199	-0.085	0.000	0.670	0.286	0.260	40.9	50.8	41.8	65.2	48.6	47.6	0.71	0.62	0.81	0.88	0.88	0.88	0.303116	1.000000	-
Rv1677	dsbF	11	20.5	30.2	23.3	27.2	28.7	33.5	-0.148	0.314	0.000	0.184	0.252	0.442	32.3	36.9	34.2	42.7	42.1	36.8	0.64	0.82	0.68	0.64	0.68	0.91	0.425256	1.000000	-
Rv1678	-	10	76.4	79.3	100.0	70.6	84.4	90.3	-0.367	-0.317	0.000	-0.473	-0.232	-0.140	84.9	88.1	100.0	88.3	93.8	112.9	0.90	0.90	1.00	0.80	0.90	0.80	0.169173	0.997049	-
Rv1679	fadE16	8	17.6	26.8	24.7	27.3	28.3	15.7	-0.395	0.101	0.000	0.123	0.167	-0.520	35.1	39.0	32.9	43.7	41.2	31.4	0.50	0.69	0.75	0.62	0.69	0.50	0.708717	1.000000	-
Rv1680	-	14	69.2	86.5	72.3	75.2	79.8	68.1	-0.061	0.242	0.000	0.053	0.133	-0.081	103.7	100.9	112.5	98.7	101.6	82.9	0.67	0.86	0.64	0.76	0.79	0.82	0.918276	1.000000	-
Rv1681	moeX	12	187.5	153.3	177.0	179.6	155.9	135.5	0.081	-0.201	0.000	0.020	-0.178	-0.373	211.0	184.0	202.3	195.9	155.9	154.9	0.89	0.83	0.88	0.92	1.00	0.88	0.647685	1.000000	-
Rv1682	-	13	63.7	59.7	71.5	58.9	55.6	72.4	-0.155	-0.241	0.000	-0.260	-0.337	0.016	77.6	64.7	80.8	67.6	62.8	72.4	0.82	0.92	0.88	0.87	0.88	1.00	0.600856	1.000000	-
Rv1683	-	36	12.6	20.1	11.3	23.9	30.2	17.7	0.113	0.624	0.000	0.825	1.112	0.477	29.6	35.3	31.3	39.1	47.3	31.1	0.43	0.57	0.36	0.61	0.64	0.57	0.000187	0.004521	-
Rv1684	-	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1685c	-	7	35.5	42.1	53.0	55.4	53.8	53.7	-0.519	-0.300	0.000	0.058	0.020	0.018	43.8	49.1	61.8	58.2	62.8	53.7	0.81	0.86	0.86	0.95	0.86	1.00	0.397826	1.000000	-
Rv1686c	-	12	40.5	38.7	32.9	40.4	39.8	38.1	0.265	0.204	0.000	0.261	0.241	0.187	54.0	46.4	46.4	56.0	50.2	53.8	0.75	0.83	0.71	0.72	0.79	0.71	0.983530	1.000000	-
Rv1687c	-	10	106.6	124.4	109.1	102.0	119.4	124.6	-0.032	0.182	0.000	-0.093	0.125	0.184	133.2	138.2	121.2	127.5	132.6	138.4	0.80	0.90	0.90	0.80	0.90	0.90	0.978935	1.000000	-
Rv1688	mpg	8	202.1	149.9	165.1	173.6	139.7	121.2	0.284	-0.135	0.000	0.070	-0.234	-0.431	202.1	171.4	188.7	173.6	159.6	121.2	1.00	0.88	0.88	1.00	0.88	1.00	0.239045	1.000000	-
Rv1689	tyrS	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1690	lprJ	6	103.0	139.8	135.8	99.2	105.7	76.3	-0.383	0.040	0.000	-0.435	-0.348	-0.793	123.6	139.8	135.8	119.0	115.3	83.2	0.83	1.00	1.00	0.83	0.92	0.92	0.480990	1.000000	-
Rv1691	-	9	95.2	83.6	97.2	178.8	148.5	111.6	-0.030	-0.207	0.000	0.846	0.586	0.189	128.5	100.3	125.0	201.2	167.1	111.6	0.74	0.83	0.78	0.89	0.89	1.00	0.027703	0.305347	-
Rv1692	-	10	86.7	159.6	132.6	140.6	132.0	99.0	-0.585	0.259	0.000	0.082	-0.006	-0.404	96.3	187.8	147.3	150.6	165.0	123.7	0.90	0.85	0.90	0.93	0.80	0.80	0.084609	0.679353	-
Rv1693	-	1	100.0	126.7	90.6	73.9	94.7	60.8	0.134	0.461	0.000	-0.277	0.060	-0.540	100.0	126.7	90.6	73.9	94.7	60.8	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1694	tlyA	8	144.8	101.7	108.3	100.4	64.7	106.8	0.403	-0.087	0.000	-0.104	-0.701	-0.019	165.5	147.9	133.3	114.8	103.5	131.5	0.88	0.69	0.81	0.88	0.62	0.81	0.519564	1.000000	-
Rv1695	ppnK	7	1.1	0.0	0.0	0.0	1.0	0.0	0.281	0.000	0.000	0.000	0.272	0.000	22.6	0.0	0.0	0.0	14.5	0.0	0.05	0.00	0.00	0.00	0.07	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1696	recN	18	87.6	78.7	103.5	82.4	92.9	69.1	-0.229	-0.374	0.000	-0.311	-0.149	-0.551	105.1	101.2	116.4	90.9	104.5	80.2	0.83	0.78	0.89	0.91	0.89	0.86	0.737075	1.000000	-
Rv1697	-	15	0.0	0.3	0.0	0.0	0.8	0.0	0.000	0.093	0.000	0.000	0.210	0.000	0.0	10.0	0.0	0.0	11.8	0.0	0.00	0.03	0.00	0.00	0.07	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1698	-	12	64.9	46.7	55.6	58.2	62.2	50.4	0.205	-0.231	0.000	0.060	0.148	-0.131	93.4	93.3	78.5	87.3	99.5	75.5	0.69	0.50	0.71	0.67	0.62	0.67	0.850725	1.000000	-
Rv1699	pyrG	34	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1700	-	10	12.8	23.0	17.5	14.2	17.0	17.4	-0.338	0.319	0.000	-0.226	-0.034	-0.009	32.0	46.1	35.0	42.7	37.7	31.5	0.40	0.50	0.50	0.33	0.45	0.55	0.856704	1.000000	-
Rv1701	xerD	13	97.4	116.0	114.4	122.5	105.6	129.1	-0.222	0.019	0.000	0.094	-0.110	0.167	115.1	125.6	141.7	136.5	124.8	139.9	0.85	0.92	0.81	0.90	0.85	0.92	0.941743	1.000000	-
Rv1702c	-	20	78.9	73.1	73.6	81.8	74.4	81.8	0.094	-0.010	0.000	0.143	0.014	0.143	96.6	83.5	95.0	92.6	90.2	83.9	0.82	0.88	0.78	0.88	0.82	0.97	0.587128	1.000000	-
Rv1703c	-	11	119.6	133.8	117.1	105.9	121.4	122.8	0.029	0.185	0.000	-0.139	0.050	0.066	151.8	226.5	151.5	124.8	166.9	150.1	0.79	0.59	0.77	0.85	0.73	0.82	0.428309	1.000000	-
Rv1704c	cycA	18	111.2	117.1	114.7	112.5	111.0	130.2	-0.043	0.029	0.000	-0.026	-0.045	0.176	153.9	145.4	158.8	151.9	137.8	151.2	0.72	0.81	0.72	0.74	0.81	0.86	0.994426	1.000000	-
Rv1705c	PPE22	23	99.4	102.2	97.9	105.0	120.6	108.9	0.021	0.059	0.000	0.097	0.288	0.146	129.4	134.3	125.0	129.4	142.2	122.1	0.77	0.76	0.78	0.81	0.85	0.89	0.919275	1.000000	-
Rv1706c	PPE23	18	113.2	138.7	98.9	103.8	104.9	100.9	0.186	0.468	0.000	0.066	0.081	0.028	197.2	208.1	209.5	180.8	151.1	158.0	0.57	0.67	0.47	0.57	0.69	0.64	0.945682	1.000000	-
Rv1706A	-	1	0.0	10.2	21.8	0.0	19.0	14.8	-2.422	-0.818	0.000	-2.422	-0.162	-0.437	0.0	10.2	21.8	0.0	19.0	14.8	0.00	1.00	1.00	0.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1707	-	19	183.1	178.5	172.5	140.1	150.1	169.0	0.084	0.048	0.000	-0.291	-0.194	-0.028	189.8	193.8	177.2	150.7	158.5	169.0	0.96	0.92	0.97	0.93	0.95	1.00	0.616738	1.000000	-
Rv1708	-	16	7.3	12.7	11.0	0.8	3.7	8.6	-0.378	0.147	0.000	-1.449	-0.881	-0.227	23.3	18.4	27.0	20.4	23.5	15.4	0.31	0.69	0.41	0.04	0.16	0.56	0.000000	0.000000	-
Rv1709	-	11	120.1	131.8	106.9	98.5	102.6	127.3	0.160	0.290	0.000	-0.114	-0.057	0.241	123.8	131.8	112.0	101.5	102.6	127.3	0.97	1.00	0.95	0.97	1.00	1.00	0.851940	1.000000	-
Rv1710	-	13	106.5	95.8	109.7	67.4	90.6	78.0	-0.041	-0.187	0.000	-0.663	-0.262	-0.466	143.2	131.0	142.6	114.3	124.0	112.7	0.74	0.73	0.77	0.59	0.73	0.69	0.847986	1.000000	-
Rv1711	-	9	5.4	8.0	7.6	6.9	13.1	13.3	-0.279	0.041	0.000	-0.091	0.520	0.530	18.3	24.0	19.7	23.2	33.8	21.7	0.30	0.33	0.39	0.30	0.39	0.61	0.224158	1.000000	-
Rv1712	cmk	11	31.9	14.0	30.7	61.1	49.0	20.7	0.049	-0.914	0.000	0.888	0.596	-0.475	87.8	30.7	61.4	126.0	107.7	41.4	0.36	0.45	0.50	0.48	0.45	0.50	0.089213	0.696425	-
Rv1713	engA	11	0.4	0.5	0.0	0.0	0.0	0.4	0.098	0.126	0.000	0.000	0.000	0.118	11.6	10.0	0.0	0.0	0.0	9.4	0.03	0.05	0.00	0.00	0.00	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1714	-	6	45.4	60.2	54.2	50.1	62.7	80.6	-0.231	0.140	0.000	-0.104	0.193	0.531	74.4	72.3	72.3	60.1	68.4	87.9	0.61	0.83	0.75	0.83	0.92	0.92	0.719613	1.000000	-
Rv1715	fadB3	9	66.2	39.8	56.6	63.9	45.5	58.5	0.208	-0.460	0.000	0.161	-0.287	0.042	77.7	65.2	85.0	86.3	51.2	70.2	0.85	0.61	0.67	0.74	0.89	0.83	0.443974	1.000000	-
Rv1716	-	11	40.4	54.7	53.2	64.7	44.4	57.0	-0.359	0.037	0.000	0.258	-0.238	0.090	70.2	86.0	90.1	88.9	57.4	62.7	0.58	0.64	0.59	0.73	0.77	0.91	0.394401	1.000000	-
Rv1717	-	4	197.4	215.1	228.2	195.9	239.6	183.1	-0.204	-0.084	0.000	-0.215	0.069	-0.310	197.4	215.1	228.2	195.9	239.6	183.1	1.00	1.00	1.00	1.00	1.00	1.00	0.919349	1.000000	-
Rv1718	-	7	130.9	171.9	179.4	146.6	147.3	126.1	-0.440	-0.060	0.000	-0.282	-0.277	-0.492	152.7	171.9	179.4	154.0	147.3	126.1	0.86	1.00	1.00	0.95	1.00	1.00	0.576639	1.000000	-
Rv1719	-	6	124.4	133.2	143.1	103.0	116.3	134.4	-0.194	-0.099	0.000	-0.456	-0.287	-0.087	124.4	133.2	143.1	103.0	116.3	134.4	1.00	1.00	1.00	1.00	1.00	1.00	0.938850	1.000000	-
Rv1720c	-	9	21.4	20.9	20.1	19.7	22.2	27.7	0.073	0.044	0.000	-0.028	0.112	0.377	38.6	23.5	27.9	26.5	24.9	33.2	0.56	0.89	0.72	0.74	0.89	0.83	0.166625	0.995413	-
Rv1721c	-	2	176.7	134.8	186.4	203.7	144.4	241.2	-0.075	-0.453	0.000	0.125	-0.358	0.363	176.7	134.8	186.4	203.7	144.4	241.2	1.00	1.00	1.00	1.00	1.00	1.00	0.855738	1.000000	-
Rv1722	-	22	249.2	265.9	237.5	237.0	247.2	252.4	0.068	0.160	0.000	-0.003	0.056	0.086	257.0	278.6	261.3	252.3	247.2	264.4	0.97	0.95	0.91	0.94	1.00	0.95	0.695308	1.000000	-
Rv1723	-	16	264.3	225.9	218.0	246.4	238.5	226.9	0.272	0.050	0.000	0.173	0.127	0.056	281.9	241.0	225.0	281.6	238.5	259.3	0.94	0.94	0.97	0.88	1.00	0.88	0.375188	1.000000	-
Rv1724c	-	11	143.0	155.5	151.1	138.9	151.3	151.1	-0.077	0.041	0.000	-0.118	0.002	0.000	168.5	180.1	184.7	158.0	166.5	166.2	0.85	0.86	0.82	0.88	0.91	0.91	0.999240	1.000000	-
Rv1725c	-	9	140.6	137.8	139.7	148.6	143.6	163.0	0.008	-0.019	0.000	0.086	0.038	0.215	158.2	137.8	148.0	148.6	172.3	172.6	0.89	1.00	0.94	1.00	0.83	0.94	0.430462	1.000000	-
Rv1726	-	15	100.9	112.4	98.4	93.0	90.8	82.2	0.035	0.183	0.000	-0.078	-0.110	-0.246	141.9	134.9	134.2	130.8	113.5	102.8	0.71	0.83	0.73	0.71	0.80	0.80	0.984660	1.000000	-
Rv1727	-	4	262.5	239.6	196.1	189.6	180.7	256.2	0.411	0.282	0.000	-0.048	-0.115	0.377	350.0	319.5	261.5	252.8	180.7	256.2	0.75	0.75	0.75	0.75	1.00	1.00	0.739745	1.000000	-
Rv1728c	-	17	47.4	53.1	66.4	58.6	69.3	57.3	-0.445	-0.296	0.000	-0.167	0.059	-0.195	78.0	64.5	94.0	99.5	102.5	84.7	0.61	0.82	0.71	0.59	0.68	0.68	0.391232	1.000000	-
Rv1729c	-	21	65.4	52.5	55.2	65.5	75.6	66.9	0.227	-0.065	0.000	0.229	0.421	0.256	98.1	73.5	82.7	96.0	99.2	90.6	0.67	0.71	0.67	0.68	0.76	0.74	0.933198	1.000000	-
Rv1730c	-	29	25.9	18.9	37.8	20.7	23.2	26.3	-0.470	-0.838	0.000	-0.738	-0.602	-0.450	46.9	35.4	46.6	41.8	39.6	42.4	0.55	0.53	0.81	0.49	0.59	0.62	0.008704	0.124924	-
Rv1731	gabD2	23	114.6	89.8	99.6	80.5	95.8	70.6	0.193	-0.141	0.000	-0.290	-0.053	-0.469	129.6	98.4	111.7	91.1	102.5	77.3	0.88	0.91	0.89	0.88	0.93	0.91	0.360546	1.000000	-
Rv1732c	-	8	66.2	87.6	104.2	79.1	75.5	101.2	-0.617	-0.238	0.000	-0.376	-0.441	-0.041	66.2	87.6	104.2	79.1	75.5	101.2	1.00	1.00	1.00	1.00	1.00	1.00	0.243150	1.000000	-
Rv1733c	-	5	38.7	47.0	59.9	58.3	61.8	49.8	-0.569	-0.320	0.000	-0.036	0.043	-0.242	41.5	52.2	66.5	58.3	61.8	49.8	0.93	0.90	0.90	1.00	1.00	1.00	0.790074	1.000000	-
Rv1734c	-	2	143.1	308.8	229.4	151.3	195.6	94.8	-0.663	0.421	0.000	-0.585	-0.224	-1.232	143.1	308.8	229.4	151.3	195.6	94.8	1.00	1.00	1.00	1.00	1.00	1.00	0.252141	1.000000	-
Rv1735c	-	6	88.1	54.4	71.9	59.2	76.1	86.8	0.277	-0.372	0.000	-0.260	0.077	0.256	88.1	65.3	86.3	71.1	76.1	86.8	1.00	0.83	0.83	0.83	1.00	1.00	0.365117	1.000000	-
Rv1736c	narX	37	133.6	111.7	112.8	116.5	116.6	108.2	0.234	-0.015	0.000	0.044	0.045	-0.058	151.3	127.1	126.5	128.1	130.7	119.5	0.88	0.88	0.89	0.91	0.89	0.91	0.970581	1.000000	-
Rv1737c	narK2	13	157.2	153.5	159.5	145.0	143.3	134.5	-0.020	-0.053	0.000	-0.133	-0.149	-0.238	157.2	153.5	165.8	145.0	143.3	139.9	1.00	1.00	0.96	1.00	1.00	0.96	0.868087	1.000000	-
Rv1738	-	2	31.0	17.6	10.9	32.1	23.5	12.8	1.180	0.511	0.000	1.223	0.839	0.165	31.0	17.6	21.8	32.1	23.5	12.8	1.00	1.00	0.50	1.00	1.00	1.00	0.059675	0.535068	-
Rv1739c	-	36	120.4	94.2	104.9	119.7	96.3	96.4	0.191	-0.147	0.000	0.183	-0.118	-0.115	132.7	104.4	111.0	124.3	99.0	105.2	0.91	0.90	0.94	0.96	0.97	0.92	0.259890	1.000000	-
Rv1740	-	4	134.7	132.4	117.8	138.0	129.6	93.3	0.185	0.162	0.000	0.219	0.132	-0.322	134.7	132.4	117.8	138.0	129.6	106.6	1.00	1.00	1.00	1.00	1.00	0.88	0.901144	1.000000	-
Rv1741	-	6	146.4	192.9	160.9	172.6	196.0	152.3	-0.132	0.255	0.000	0.098	0.277	-0.077	146.4	192.9	160.9	172.6	196.0	152.3	1.00	1.00	1.00	1.00	1.00	1.00	0.890360	1.000000	-
Rv1742	-	13	211.2	213.0	196.6	211.2	226.4	166.2	0.101	0.112	0.000	0.101	0.199	-0.236	249.6	230.7	243.4	228.7	226.4	180.1	0.85	0.92	0.81	0.92	1.00	0.92	0.533589	1.000000	-
Rv1743	pknE	29	199.4	197.3	190.3	200.5	195.4	182.9	0.066	0.051	0.000	0.074	0.037	-0.055	225.2	228.8	212.2	210.2	222.2	196.5	0.89	0.86	0.90	0.95	0.88	0.93	0.757267	1.000000	-
Rv1744c	-	5	301.1	215.9	237.9	281.1	214.1	216.8	0.334	-0.137	0.000	0.236	-0.149	-0.131	376.4	215.9	339.8	281.1	237.9	216.8	0.80	1.00	0.70	1.00	0.90	1.00	0.338672	1.000000	-
Rv1745c	idi	11	29.5	18.5	31.5	29.7	29.1	32.1	-0.082	-0.637	0.000	-0.074	-0.099	0.021	65.0	31.3	49.6	54.5	40.1	44.1	0.45	0.59	0.64	0.55	0.73	0.73	0.341544	1.000000	-
Rv1746	pknF	13	68.0	120.6	87.5	101.3	88.2	92.0	-0.341	0.441	0.000	0.200	0.011	0.068	94.8	142.5	113.8	119.7	99.7	104.0	0.72	0.85	0.77	0.85	0.88	0.88	0.764079	1.000000	-
Rv1747	-	29	161.3	182.2	171.4	177.6	216.9	165.3	-0.085	0.085	0.000	0.050	0.331	-0.051	187.1	207.2	194.9	203.3	241.9	195.6	0.86	0.88	0.88	0.87	0.90	0.84	0.829220	1.000000	-
Rv1748	-	12	110.7	136.2	127.8	112.2	101.6	130.1	-0.198	0.089	0.000	-0.180	-0.316	0.025	110.7	148.6	153.3	134.6	122.0	142.0	1.00	0.92	0.83	0.83	0.83	0.92	0.085835	0.684368	-
Rv1749c	-	16	117.1	137.2	113.9	134.2	113.6	140.2	0.038	0.259	0.000	0.228	-0.004	0.288	137.1	146.4	121.5	143.2	117.2	140.2	0.85	0.94	0.94	0.94	0.97	1.00	0.504988	1.000000	-
Rv1750c	fadD1	36	105.1	102.6	104.0	101.3	88.0	111.5	0.015	-0.018	0.000	-0.035	-0.228	0.097	136.8	129.6	138.6	124.3	103.9	133.8	0.77	0.79	0.75	0.81	0.85	0.83	0.968443	1.000000	-
Rv1751	-	19	67.2	57.6	77.3	71.5	76.1	71.5	-0.190	-0.394	0.000	-0.105	-0.023	-0.106	85.1	62.6	89.1	76.9	85.0	82.3	0.79	0.92	0.87	0.93	0.89	0.87	0.535165	1.000000	-
Rv1752	-	4	98.7	52.2	70.8	76.4	77.6	51.9	0.452	-0.405	0.000	0.103	0.123	-0.413	118.4	52.2	80.9	83.4	77.6	51.9	0.83	1.00	0.88	0.92	1.00	1.00	0.181510	1.000000	-
Rv1753c	PPE24	61	27.1	27.9	30.7	23.2	23.8	26.4	-0.153	-0.120	0.000	-0.341	-0.309	-0.187	75.2	64.2	87.1	64.3	54.9	48.8	0.36	0.43	0.35	0.36	0.43	0.54	0.131273	0.870063	-
Rv1754c	-	33	122.1	107.5	117.1	111.1	111.2	116.6	0.057	-0.118	0.000	-0.074	-0.072	-0.006	143.9	124.5	133.3	120.8	128.7	126.2	0.85	0.86	0.88	0.92	0.86	0.92	0.892725	1.000000	-
Rv1755c	plcD	16	18.5	11.2	13.1	16.3	14.7	9.2	0.376	-0.160	0.000	0.236	0.124	-0.344	98.5	59.6	69.8	86.9	78.5	49.3	0.19	0.19	0.19	0.19	0.19	0.19	0.964292	1.000000	-
Rv1756c	-	21	297.2	292.5	316.6	306.7	274.8	290.2	-0.090	-0.113	0.000	-0.045	-0.201	-0.124	390.1	361.3	391.1	378.8	349.7	320.7	0.76	0.81	0.81	0.81	0.79	0.90	0.969687	1.000000	-
Rv1757c	-	4	240.4	251.9	228.8	254.2	246.0	177.9	0.070	0.136	0.000	0.149	0.102	-0.355	240.4	251.9	228.8	254.2	246.0	177.9	1.00	1.00	1.00	1.00	1.00	1.00	0.877969	1.000000	-
Rv1758	cut1	11	267.5	268.0	249.2	244.2	223.6	209.5	0.100	0.103	0.000	-0.029	-0.153	-0.245	275.9	280.8	249.2	260.0	223.6	219.5	0.97	0.95	1.00	0.94	1.00	0.95	0.999936	1.000000	-
Rv1759c	wag22	23	145.1	139.4	131.6	137.5	129.8	116.8	0.136	0.080	0.000	0.061	-0.019	-0.166	188.9	183.2	172.9	175.6	157.1	137.7	0.77	0.76	0.76	0.78	0.83	0.85	0.955293	1.000000	-
Rv1760	-	26	101.2	103.7	127.7	107.9	107.3	118.0	-0.321	-0.288	0.000	-0.234	-0.241	-0.109	116.1	117.2	150.9	116.9	118.8	127.9	0.87	0.88	0.85	0.92	0.90	0.92	0.915153	1.000000	-
Rv1761c	-	4	104.0	110.8	85.2	91.4	106.9	113.5	0.274	0.361	0.000	0.097	0.311	0.393	138.7	110.8	85.2	121.9	142.5	113.5	0.75	1.00	1.00	0.75	0.75	1.00	0.104482	0.756025	-
Rv1762c	-	9	179.6	153.6	183.1	161.6	184.3	188.5	-0.027	-0.246	0.000	-0.175	0.010	0.041	179.6	172.8	219.7	181.8	207.4	212.0	1.00	0.89	0.83	0.89	0.89	0.89	0.412769	1.000000	-
Rv1763	-	4	199.7	262.7	241.4	257.3	242.5	164.8	-0.267	0.119	0.000	0.090	0.006	-0.538	199.7	262.7	241.4	257.3	242.5	164.8	1.00	1.00	1.00	1.00	1.00	1.00	0.538152	1.000000	-
Rv1764	-	21	298.8	289.8	317.6	298.5	288.7	289.2	-0.086	-0.130	0.000	-0.088	-0.136	-0.133	384.2	338.1	416.8	376.2	356.6	347.0	0.78	0.86	0.76	0.79	0.81	0.83	0.999066	1.000000	-
Rv1765c	-	6	79.9	102.1	82.7	87.7	75.6	90.2	-0.046	0.288	0.000	0.080	-0.121	0.118	79.9	102.1	82.7	87.7	75.6	90.2	1.00	1.00	1.00	1.00	1.00	1.00	0.837939	1.000000	-
Rv1765A	-	3	64.4	84.7	81.3	69.6	62.6	74.1	-0.314	0.056	0.000	-0.209	-0.352	-0.126	96.6	101.6	121.9	89.5	93.9	111.1	0.67	0.83	0.67	0.78	0.67	0.67	0.997316	1.000000	-
Rv1766	-	3	123.0	133.3	132.5	119.8	113.4	122.9	-0.103	0.009	0.000	-0.140	-0.216	-0.104	184.5	200.0	198.7	134.8	170.1	147.5	0.67	0.67	0.67	0.89	0.67	0.83	0.969411	1.000000	-
Rv1767	-	7	210.7	194.0	143.6	193.3	174.1	149.4	0.537	0.421	0.000	0.416	0.269	0.056	232.8	194.0	143.6	225.6	174.1	174.4	0.90	1.00	1.00	0.86	1.00	0.86	0.338572	1.000000	-
Rv1768	PE_PGRS31	17	136.0	132.3	165.0	151.0	168.8	136.1	-0.269	-0.308	0.000	-0.124	0.032	-0.269	147.6	140.5	180.9	163.8	179.3	136.1	0.92	0.94	0.91	0.92	0.94	1.00	0.632368	1.000000	-
Rv1769	-	20	173.0	161.9	170.7	188.1	190.2	155.5	0.019	-0.074	0.000	0.136	0.152	-0.131	185.4	161.9	189.6	201.5	200.2	163.6	0.93	1.00	0.90	0.93	0.95	0.95	0.641579	1.000000	-
Rv1770	-	16	307.0	283.4	295.8	337.0	339.5	339.9	0.053	-0.061	0.000	0.186	0.196	0.198	368.4	377.9	350.5	414.8	417.9	388.5	0.83	0.75	0.84	0.81	0.81	0.88	0.878263	1.000000	-
Rv1771	-	22	179.1	188.6	173.2	178.0	181.2	182.4	0.046	0.119	0.000	0.038	0.063	0.073	184.6	197.6	177.3	186.5	181.2	191.1	0.97	0.95	0.98	0.95	1.00	0.95	0.804837	1.000000	-
Rv1772	-	4	16.4	27.0	15.6	17.4	31.4	24.3	0.054	0.635	0.000	0.118	0.820	0.508	32.8	72.1	41.7	34.8	62.8	97.3	0.50	0.38	0.38	0.50	0.50	0.25	0.560197	1.000000	-
Rv1773c	-	10	83.9	76.5	66.9	95.8	79.1	69.5	0.306	0.180	0.000	0.487	0.226	0.051	100.7	85.0	74.4	106.5	93.1	81.8	0.83	0.90	0.90	0.90	0.85	0.85	0.927488	1.000000	-
Rv1774	-	27	112.2	125.7	117.6	120.0	128.3	127.3	-0.065	0.093	0.000	0.029	0.121	0.110	121.1	144.5	127.0	129.6	135.8	132.2	0.93	0.87	0.93	0.93	0.94	0.96	0.777144	1.000000	-
Rv1775	-	12	87.3	92.8	128.8	127.1	104.5	100.8	-0.535	-0.452	0.000	-0.019	-0.290	-0.339	108.4	101.3	140.6	143.0	109.0	109.9	0.81	0.92	0.92	0.89	0.96	0.92	0.779294	1.000000	-
Rv1776c	-	11	82.1	76.0	96.7	87.3	82.7	76.9	-0.224	-0.328	0.000	-0.140	-0.213	-0.313	123.1	119.5	118.2	120.0	101.1	112.7	0.67	0.64	0.82	0.73	0.82	0.68	0.936959	1.000000	-
Rv1777	cyp144	23	93.4	93.4	108.1	97.7	89.3	75.9	-0.201	-0.201	0.000	-0.139	-0.263	-0.483	109.2	110.1	127.5	118.3	102.6	91.9	0.86	0.85	0.85	0.83	0.87	0.83	0.965296	1.000000	-
Rv1778c	-	5	38.0	30.6	52.7	35.2	42.2	62.8	-0.425	-0.696	0.000	-0.519	-0.289	0.232	47.5	30.6	58.5	37.8	46.9	62.8	0.80	1.00	0.90	0.93	0.90	1.00	0.148991	0.942781	-
Rv1779c	-	12	131.0	129.3	144.2	127.9	150.6	118.0	-0.133	-0.152	0.000	-0.166	0.061	-0.278	162.6	155.1	216.2	184.2	172.1	149.0	0.81	0.83	0.67	0.69	0.88	0.79	0.829000	1.000000	-
Rv1780	-	9	106.3	155.1	115.1	131.2	134.2	123.1	-0.109	0.415	0.000	0.182	0.214	0.093	119.6	155.1	129.4	147.6	151.0	130.3	0.89	1.00	0.89	0.89	0.89	0.94	0.710178	1.000000	-
Rv1781c	malQ	25	154.9	155.5	135.6	151.6	146.2	137.6	0.186	0.190	0.000	0.156	0.105	0.020	159.2	155.5	138.4	160.2	149.2	137.6	0.97	1.00	0.98	0.95	0.98	1.00	0.576531	1.000000	-
Rv1782	-	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1783	-	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1784	-	38	0.0	0.1	0.0	0.0	0.0	0.0	0.000	0.039	0.000	0.000	0.000	0.000	0.0	10.4	0.0	0.0	0.0	0.0	0.00	0.01	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1785c	cyp143	16	102.6	73.7	90.7	81.7	95.0	84.6	0.170	-0.282	0.000	-0.142	0.065	-0.095	126.3	87.3	116.0	106.0	98.1	100.2	0.81	0.84	0.78	0.77	0.97	0.84	0.573648	1.000000	-
Rv1786	-	1	117.3	95.8	106.7	126.2	133.6	124.9	0.131	-0.147	0.000	0.232	0.311	0.217	117.3	95.8	106.7	126.2	133.6	124.9	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1787	PPE25	15	420.5	410.5	399.9	386.0	351.9	353.5	0.072	0.037	0.000	-0.050	-0.182	-0.176	450.6	410.5	413.7	413.6	377.0	365.7	0.93	1.00	0.97	0.93	0.93	0.97	0.988393	1.000000	-
Rv1788	PE18	4	296.8	324.5	202.5	238.1	216.1	260.8	0.541	0.667	0.000	0.229	0.092	0.357	296.8	324.5	202.5	238.1	216.1	260.8	1.00	1.00	1.00	1.00	1.00	1.00	0.622816	1.000000	-
Rv1789	PPE26	18	156.6	134.0	131.5	134.9	122.8	124.9	0.243	0.025	0.000	0.035	-0.095	-0.072	176.2	166.3	169.1	151.8	130.0	140.5	0.89	0.81	0.78	0.89	0.94	0.89	0.779293	1.000000	-
Rv1790	PPE27	15	440.7	402.0	433.6	410.9	366.3	350.0	0.023	-0.108	0.000	-0.077	-0.240	-0.305	450.7	402.0	448.5	410.9	366.3	350.0	0.98	1.00	0.97	1.00	1.00	1.00	0.999865	1.000000	-
Rv1791	PE19	6	66.1	61.9	63.6	68.3	89.1	58.3	0.053	-0.037	0.000	0.096	0.456	-0.115	66.1	61.9	63.6	68.3	89.1	58.3	1.00	1.00	1.00	1.00	1.00	1.00	0.442668	1.000000	-
Rv1793	esxN	3	106.2	146.4	124.1	124.0	140.5	171.1	-0.215	0.230	0.000	-0.001	0.173	0.448	119.4	146.4	124.1	124.0	140.5	171.1	0.89	1.00	1.00	1.00	1.00	1.00	0.756331	1.000000	-
Rv1794	-	18	0.0	0.0	0.0	0.0	0.0	0.3	0.000	0.000	0.000	0.000	0.000	0.073	0.0	0.0	0.0	0.0	0.0	9.4	0.00	0.00	0.00	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1795	-	18	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1796	mycP5	29	0.0	0.0	0.0	0.2	0.0	0.2	0.000	0.000	0.000	0.048	0.000	0.053	0.0	0.0	0.0	14.8	0.0	10.8	0.00	0.00	0.00	0.01	0.00	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1797	-	15	0.5	0.0	0.0	0.0	0.0	0.0	0.138	0.000	0.000	0.000	0.000	0.000	22.6	0.0	0.0	0.0	0.0	0.0	0.02	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1798	-	30	18.3	18.3	19.9	9.4	4.8	12.9	-0.095	-0.096	0.000	-0.792	-1.339	-0.478	29.5	27.5	37.3	25.6	15.3	19.3	0.62	0.67	0.53	0.37	0.32	0.67	0.000000	0.000000	-
Rv1799	lppT	2	47.9	61.7	54.8	78.0	90.3	98.1	-0.176	0.159	0.000	0.473	0.672	0.786	57.5	61.7	54.8	78.0	90.3	98.1	0.83	1.00	1.00	1.00	1.00	1.00	0.746349	1.000000	-
Rv1800	PPE28	39	81.5	83.0	76.2	78.2	84.0	74.1	0.091	0.116	0.000	0.035	0.133	-0.038	138.2	137.8	135.1	138.6	133.8	131.4	0.59	0.60	0.56	0.56	0.63	0.56	0.996808	1.000000	-
Rv1801	PPE29	21	77.3	80.5	75.4	91.6	87.9	75.2	0.034	0.090	0.000	0.265	0.208	-0.003	85.4	89.0	87.9	99.5	90.0	78.9	0.90	0.90	0.86	0.92	0.98	0.95	0.798958	1.000000	-
Rv1802	PPE30	18	188.5	186.2	186.5	182.6	154.5	179.4	0.015	-0.002	0.000	-0.029	-0.264	-0.054	212.1	209.5	209.8	205.4	168.5	201.9	0.89	0.89	0.89	0.89	0.92	0.89	0.999131	1.000000	-
Rv1803c	PE_PGRS32	30	120.7	130.8	133.0	114.7	120.6	124.1	-0.135	-0.023	0.000	-0.205	-0.136	-0.097	155.1	160.2	159.6	145.4	144.8	148.9	0.78	0.82	0.83	0.79	0.83	0.83	0.998971	1.000000	-
Rv1804c	-	9	85.0	83.9	84.1	92.0	71.3	90.5	0.015	-0.003	0.000	0.123	-0.225	0.099	85.0	83.9	84.1	103.5	71.3	101.8	1.00	1.00	1.00	0.89	1.00	0.89	0.148230	0.941777	-
Rv1805c	-	5	19.9	12.2	16.8	26.1	19.7	11.3	0.191	-0.347	0.000	0.511	0.175	-0.419	29.9	20.3	33.7	35.6	24.6	16.2	0.67	0.60	0.50	0.73	0.80	0.70	0.266365	1.000000	-
Rv1806	PE20	5	36.5	33.0	61.8	48.8	32.3	22.7	-0.687	-0.814	0.000	-0.312	-0.841	-1.273	45.6	66.0	88.3	66.6	40.4	56.6	0.80	0.50	0.70	0.73	0.80	0.40	0.125497	0.843132	-
Rv1807	PPE31	17	63.5	87.2	74.9	105.1	102.2	71.6	-0.222	0.206	0.000	0.462	0.424	-0.061	72.0	98.8	84.9	114.1	115.8	90.2	0.88	0.88	0.88	0.92	0.88	0.79	0.072132	0.609759	-
Rv1808	PPE32	25	270.5	226.3	245.2	241.4	237.8	227.0	0.139	-0.113	0.000	-0.022	-0.043	-0.109	289.8	257.1	266.5	255.0	270.3	231.6	0.93	0.88	0.92	0.95	0.88	0.98	0.671277	1.000000	-
Rv1809	PPE33	20	103.2	86.7	91.4	97.1	107.6	86.1	0.166	-0.072	0.000	0.082	0.223	-0.083	126.3	108.4	126.1	132.4	130.4	118.7	0.82	0.80	0.72	0.73	0.82	0.72	0.916478	1.000000	-
Rv1810	-	11	137.0	121.2	138.5	129.2	133.0	116.7	-0.015	-0.185	0.000	-0.097	-0.056	-0.238	161.5	140.4	169.2	147.0	146.3	122.2	0.85	0.86	0.82	0.88	0.91	0.95	0.987457	1.000000	-
Rv1811	mgtC	15	259.0	288.4	282.4	289.6	266.9	287.7	-0.122	0.030	0.000	0.036	-0.080	0.026	259.0	288.4	282.4	289.6	266.9	287.7	1.00	1.00	1.00	1.00	1.00	1.00	0.990181	1.000000	-
Rv1812c	-	22	184.1	159.1	177.0	160.4	171.7	168.1	0.055	-0.150	0.000	-0.139	-0.043	-0.073	213.1	170.7	199.7	185.7	193.8	184.9	0.86	0.93	0.89	0.86	0.89	0.91	0.995803	1.000000	-
Rv1813c	-	9	105.5	135.5	139.8	121.3	122.3	152.3	-0.390	-0.043	0.000	-0.197	-0.186	0.120	113.9	135.5	139.8	121.3	122.3	152.3	0.93	1.00	1.00	1.00	1.00	1.00	0.353447	1.000000	-
Rv1814	erg3	21	110.1	99.1	98.4	96.0	100.2	118.9	0.155	0.011	0.000	-0.034	0.025	0.262	133.4	106.7	108.7	109.9	110.7	131.5	0.83	0.93	0.90	0.87	0.90	0.90	0.896291	1.000000	-
Rv1815	-	7	66.4	97.5	76.9	72.4	49.8	70.1	-0.198	0.324	0.000	-0.081	-0.581	-0.126	126.8	170.7	215.4	138.3	63.3	89.2	0.52	0.57	0.36	0.52	0.79	0.79	0.192186	1.000000	-
Rv1816	-	15	191.7	169.3	169.7	163.9	139.3	165.9	0.172	-0.003	0.000	-0.048	-0.276	-0.032	221.2	195.4	181.8	167.6	149.2	177.7	0.87	0.87	0.93	0.98	0.93	0.93	0.723368	1.000000	-
Rv1817	-	26	124.4	119.5	123.8	115.3	123.4	137.1	0.007	-0.050	0.000	-0.099	-0.005	0.142	134.8	132.2	140.0	119.9	125.8	137.1	0.92	0.90	0.88	0.96	0.98	1.00	0.293803	1.000000	-
Rv1818c	PE_PGRS33	11	268.8	226.2	253.7	237.8	212.5	239.0	0.082	-0.162	0.000	-0.091	-0.250	-0.085	328.5	248.8	293.7	290.7	246.1	262.8	0.82	0.91	0.86	0.82	0.86	0.91	0.994643	1.000000	-
Rv1819c	-	29	176.5	166.5	160.9	186.3	175.3	162.9	0.130	0.048	0.000	0.206	0.120	0.018	189.6	169.4	176.0	188.5	178.4	171.8	0.93	0.98	0.91	0.99	0.98	0.95	0.621355	1.000000	-
Rv1820	ilvG	16	230.9	213.1	227.3	216.3	206.4	223.3	0.022	-0.090	0.000	-0.070	-0.136	-0.025	240.9	235.2	250.8	216.3	220.2	230.5	0.96	0.91	0.91	1.00	0.94	0.97	0.668222	1.000000	-
Rv1821	secA2	36	51.5	122.5	75.4	150.5	157.5	67.5	-0.509	0.665	0.000	0.952	1.015	-0.149	65.4	139.9	92.0	156.3	166.8	72.6	0.79	0.88	0.82	0.96	0.94	0.93	0.000000	0.000000	-
Rv1822	pgsA2	17	3.9	4.5	5.1	2.7	4.9	6.1	-0.187	-0.097	0.000	-0.396	-0.036	0.134	66.2	75.9	87.1	45.9	83.0	103.9	0.06	0.06	0.06	0.06	0.06	0.06	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1823	-	14	92.1	128.3	94.5	104.5	110.3	101.9	-0.036	0.422	0.000	0.138	0.213	0.103	107.4	138.2	115.0	118.6	123.6	109.7	0.86	0.93	0.82	0.88	0.89	0.93	0.890172	1.000000	-
Rv1824	-	4	97.3	81.5	70.2	71.2	72.0	103.1	0.443	0.202	0.000	0.017	0.033	0.523	97.3	81.5	70.2	71.2	72.0	103.1	1.00	1.00	1.00	1.00	1.00	1.00	0.842027	1.000000	-
Rv1825	-	9	92.6	93.8	103.8	76.8	79.2	84.7	-0.157	-0.139	0.000	-0.412	-0.370	-0.279	100.0	93.8	116.8	76.8	79.2	84.7	0.93	1.00	0.89	1.00	1.00	1.00	0.433251	1.000000	-
Rv1826	gcvH	7	4.8	9.5	0.0	12.0	12.6	8.8	0.964	1.532	0.000	1.762	1.819	1.462	16.6	14.7	0.0	20.9	17.7	15.4	0.29	0.64	0.00	0.57	0.71	0.57	0.000661	0.013885	-
Rv1827	cfp17	6	0.6	0.0	0.0	1.6	0.0	0.0	0.175	0.000	0.000	0.405	0.000	0.000	11.6	0.0	0.0	14.6	0.0	0.0	0.06	0.00	0.00	0.11	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1828	-	13	8.2	0.4	7.7	0.0	0.0	0.0	0.056	-1.241	0.000	-1.347	-1.347	-1.347	24.7	10.0	28.7	0.0	0.0	0.0	0.33	0.04	0.27	0.00	0.00	0.00	0.000000	0.000000	-
Rv1829	-	9	68.3	106.7	112.4	110.8	126.3	100.1	-0.680	-0.072	0.000	-0.020	0.161	-0.160	80.2	106.7	119.0	110.8	142.0	112.6	0.85	1.00	0.94	1.00	0.89	0.89	0.046813	0.455165	-
Rv1830	-	10	3.4	5.1	10.3	15.6	8.4	3.2	-0.871	-0.605	0.000	0.424	-0.195	-0.906	25.3	50.7	103.2	155.7	83.9	31.8	0.13	0.10	0.10	0.10	0.10	0.10	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv1831	-	5	117.6	126.5	119.5	160.2	141.2	139.9	-0.023	0.079	0.000	0.408	0.231	0.219	117.6	126.5	119.5	160.2	141.2	139.9	1.00	1.00	1.00	1.00	1.00	1.00	0.923930	1.000000	-
Rv1832	gcvB	50	9.6	24.8	4.6	38.5	29.8	21.5	0.609	1.637	0.000	2.182	1.859	1.465	28.4	33.6	38.3	50.3	42.6	27.9	0.34	0.74	0.12	0.77	0.70	0.77	0.000000	0.000000	-
Rv1833c	-	13	89.1	94.1	114.9	87.3	70.2	76.8	-0.349	-0.275	0.000	-0.378	-0.673	-0.551	105.3	101.9	135.8	94.5	91.3	90.8	0.85	0.92	0.85	0.92	0.77	0.85	0.680909	1.000000	-
Rv1834	-	10	187.8	213.9	202.4	171.6	163.6	150.6	-0.105	0.078	0.000	-0.232	-0.299	-0.414	187.8	225.2	202.4	205.9	181.7	167.4	1.00	0.95	1.00	0.83	0.90	0.90	0.203442	1.000000	-
Rv1835c	-	34	297.1	249.7	286.6	255.9	257.6	258.6	0.051	-0.195	0.000	-0.160	-0.151	-0.145	309.2	257.2	299.8	271.9	261.4	270.6	0.96	0.97	0.96	0.94	0.99	0.96	0.972596	1.000000	-
Rv1836c	-	37	71.6	81.7	83.9	59.0	93.2	58.3	-0.215	-0.036	0.000	-0.473	0.144	-0.490	95.7	97.5	103.5	72.0	113.1	70.7	0.75	0.84	0.81	0.82	0.82	0.82	0.032778	0.348763	-
Rv1837c	glcB	22	29.8	31.9	36.0	50.1	37.0	28.7	-0.236	-0.153	0.000	0.427	0.035	-0.284	53.2	54.0	72.1	84.9	60.4	48.6	0.56	0.59	0.50	0.59	0.61	0.59	0.167011	0.995413	-
Rv1838c	-	10	424.8	432.9	400.0	399.3	407.0	399.9	0.086	0.113	0.000	-0.003	0.025	-0.000	424.8	432.9	421.1	399.3	407.0	399.9	1.00	1.00	0.95	1.00	1.00	1.00	0.969837	1.000000	-
Rv1839c	-	1	239.4	193.0	318.3	252.7	224.4	191.5	-0.404	-0.707	0.000	-0.327	-0.495	-0.718	239.4	193.0	318.3	252.7	224.4	191.5	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1840c	PE_PGRS34	15	85.9	87.8	88.9	83.3	61.6	70.2	-0.047	-0.017	0.000	-0.089	-0.494	-0.320	161.1	164.6	177.8	170.3	102.7	175.5	0.53	0.53	0.50	0.49	0.60	0.40	0.740076	1.000000	-
Rv1841c	-	13	213.7	171.7	192.0	175.6	200.1	186.6	0.151	-0.157	0.000	-0.125	0.058	-0.040	260.4	186.1	199.7	180.2	216.8	220.6	0.82	0.92	0.96	0.97	0.92	0.85	0.432292	1.000000	-
Rv1842c	-	15	174.2	180.7	157.7	166.6	150.0	147.5	0.139	0.191	0.000	0.077	-0.070	-0.093	201.0	180.7	175.2	192.3	160.7	170.2	0.87	1.00	0.90	0.87	0.93	0.87	0.586910	1.000000	-
Rv1843c	guaB1	20	294.7	239.4	266.2	251.6	254.4	271.4	0.144	-0.150	0.000	-0.080	-0.064	0.027	315.7	252.0	287.8	274.5	282.7	285.7	0.93	0.95	0.93	0.92	0.90	0.95	0.993941	1.000000	-
Rv1844c	gnd1	14	228.1	234.9	228.9	221.2	216.4	217.5	-0.005	0.036	0.000	-0.048	-0.080	-0.072	233.7	234.9	237.4	238.3	216.4	225.6	0.98	1.00	0.96	0.93	1.00	0.96	0.862391	1.000000	-
Rv1845c	-	13	484.1	350.2	261.2	5.0	6.6	348.9	0.878	0.416	0.000	-4.730	-4.522	0.411	484.1	350.2	282.9	21.8	21.4	348.9	1.00	1.00	0.92	0.23	0.31	1.00	0.000000	0.000000	-
Rv1846c	-	3	81.1	76.7	70.7	80.7	80.6	116.8	0.185	0.109	0.000	0.178	0.177	0.685	81.1	76.7	84.9	80.7	80.6	116.8	1.00	1.00	0.83	1.00	1.00	1.00	0.649477	1.000000	-
Rv1847	-	5	229.5	223.4	236.7	244.2	208.6	266.4	-0.044	-0.082	0.000	0.044	-0.178	0.167	229.5	223.4	295.9	244.2	208.6	266.4	1.00	1.00	0.80	1.00	1.00	1.00	0.690146	1.000000	-
Rv1848	ureA	2	186.9	211.4	158.3	142.8	158.2	178.4	0.232	0.406	0.000	-0.144	-0.001	0.167	186.9	211.4	158.3	142.8	158.2	178.4	1.00	1.00	1.00	1.00	1.00	1.00	0.933909	1.000000	-
Rv1849	ureB	6	64.2	71.4	80.9	69.2	67.2	58.3	-0.311	-0.169	0.000	-0.211	-0.250	-0.440	64.2	71.4	97.0	83.0	80.6	70.0	1.00	1.00	0.83	0.83	0.83	0.83	0.305928	1.000000	-
Rv1850	ureC	11	105.6	83.9	120.3	111.0	106.4	101.7	-0.179	-0.495	0.000	-0.111	-0.170	-0.231	116.2	97.2	120.3	122.1	117.0	111.9	0.91	0.86	1.00	0.91	0.91	0.91	0.751463	1.000000	-
Rv1851	ureF	2	355.4	284.9	496.3	369.0	469.7	382.2	-0.476	-0.790	0.000	-0.422	-0.079	-0.372	355.4	284.9	496.3	369.0	469.7	382.2	1.00	1.00	1.00	1.00	1.00	1.00	0.953312	1.000000	-
Rv1852	ureG	4	303.5	221.9	255.3	266.1	218.8	167.7	0.245	-0.198	0.000	0.058	-0.218	-0.592	404.7	253.6	255.3	290.2	218.8	223.5	0.75	0.88	1.00	0.92	1.00	0.75	0.591186	1.000000	-
Rv1853	ureD	5	45.4	27.6	28.1	50.7	50.0	44.7	0.606	-0.020	0.000	0.751	0.732	0.586	61.9	39.5	46.8	63.4	50.0	55.9	0.73	0.70	0.60	0.80	1.00	0.80	0.359626	1.000000	-
Rv1854c	ndh	17	107.1	100.8	101.3	63.0	71.9	99.5	0.077	-0.007	0.000	-0.645	-0.467	-0.025	118.8	107.1	118.8	73.0	81.5	105.7	0.90	0.94	0.85	0.86	0.88	0.94	0.268224	1.000000	-
Rv1855c	-	11	208.5	212.8	192.8	226.1	226.0	221.5	0.110	0.139	0.000	0.224	0.224	0.195	229.4	234.1	212.1	248.7	248.6	221.5	0.91	0.91	0.91	0.91	0.91	1.00	0.843982	1.000000	-
Rv1856c	-	4	407.4	403.9	239.6	455.7	393.1	363.9	0.754	0.742	0.000	0.914	0.703	0.593	407.4	403.9	239.6	455.7	393.1	363.9	1.00	1.00	1.00	1.00	1.00	1.00	0.648342	1.000000	-
Rv1857	modA	5	132.0	166.3	142.4	156.0	146.6	192.1	-0.105	0.217	0.000	0.128	0.041	0.419	132.0	166.3	142.4	156.0	146.6	192.1	1.00	1.00	1.00	1.00	1.00	1.00	0.860019	1.000000	-
Rv1858	modB	17	195.8	171.2	193.5	136.1	153.6	155.4	0.017	-0.172	0.000	-0.492	-0.324	-0.307	203.8	171.2	205.6	141.7	153.6	155.4	0.96	1.00	0.94	0.96	1.00	1.00	0.299010	1.000000	-
Rv1859	modC	16	244.7	211.8	217.6	195.3	224.0	220.9	0.166	-0.038	0.000	-0.152	0.041	0.021	249.9	211.8	224.6	195.3	224.0	220.9	0.98	1.00	0.97	1.00	1.00	1.00	0.884452	1.000000	-
Rv1860	apa	14	89.7	142.5	86.7	157.2	158.6	141.0	0.046	0.686	0.000	0.823	0.835	0.671	107.6	173.5	101.1	173.7	158.6	146.2	0.83	0.82	0.86	0.90	1.00	0.96	0.043358	0.432500	-
Rv1861	-	7	46.8	46.4	62.7	51.1	51.9	68.5	-0.387	-0.399	0.000	-0.272	-0.250	0.119	61.4	46.4	79.8	67.0	60.6	80.0	0.76	1.00	0.79	0.76	0.86	0.86	0.340062	1.000000	-
Rv1862	adhA	15	330.8	313.5	360.5	331.9	319.3	299.5	-0.122	-0.198	0.000	-0.117	-0.173	-0.263	372.1	313.5	386.3	364.3	342.1	320.9	0.89	1.00	0.93	0.91	0.93	0.93	0.828414	1.000000	-
Rv1863c	-	10	260.9	212.1	236.0	214.4	230.2	217.3	0.142	-0.151	0.000	-0.135	-0.035	-0.116	279.6	223.2	262.2	268.0	230.2	241.5	0.93	0.95	0.90	0.80	1.00	0.90	0.658008	1.000000	-
Rv1864c	-	9	327.8	340.1	324.6	299.7	280.3	235.6	0.014	0.066	0.000	-0.113	-0.208	-0.454	327.8	340.1	324.6	299.7	280.3	235.6	1.00	1.00	1.00	1.00	1.00	1.00	0.671271	1.000000	-
Rv1865c	-	12	105.6	97.8	103.7	114.8	112.4	115.4	0.025	-0.080	0.000	0.141	0.111	0.148	122.6	130.4	118.5	133.3	134.8	138.5	0.86	0.75	0.88	0.86	0.83	0.83	0.890507	1.000000	-
Rv1866	-	32	93.2	86.7	97.8	107.1	99.7	91.9	-0.066	-0.164	0.000	0.125	0.027	-0.086	117.7	97.4	125.2	122.4	112.0	110.9	0.79	0.89	0.78	0.88	0.89	0.83	0.740537	1.000000	-
Rv1867	-	18	121.5	116.6	145.2	134.7	143.1	142.3	-0.248	-0.305	0.000	-0.105	-0.021	-0.028	136.7	135.4	158.4	145.5	156.1	150.7	0.89	0.86	0.92	0.93	0.92	0.94	0.964228	1.000000	-
Rv1868	-	27	218.4	202.6	218.0	201.0	198.2	206.5	0.003	-0.103	0.000	-0.114	-0.134	-0.076	256.4	214.5	267.5	229.3	218.4	237.3	0.85	0.94	0.81	0.88	0.91	0.87	0.886929	1.000000	-
Rv1869c	-	23	149.6	141.8	135.7	144.1	126.7	132.7	0.135	0.061	0.000	0.083	-0.096	-0.032	184.3	151.7	152.3	165.7	138.7	148.9	0.81	0.93	0.89	0.87	0.91	0.89	0.776940	1.000000	-
Rv1870c	-	10	95.9	124.4	95.1	94.6	100.7	94.5	0.010	0.370	0.000	-0.008	0.078	-0.010	110.6	124.4	100.1	94.6	100.7	94.5	0.87	1.00	0.95	1.00	1.00	1.00	0.242017	1.000000	-
Rv1871c	-	8	194.3	184.2	181.3	182.8	184.4	209.0	0.097	0.022	0.000	0.011	0.024	0.200	194.3	184.2	181.3	190.7	184.4	222.9	1.00	1.00	1.00	0.96	1.00	0.94	0.876963	1.000000	-
Rv1872c	lldD2	13	256.1	201.8	238.7	214.6	183.6	269.5	0.099	-0.237	0.000	-0.150	-0.370	0.171	293.8	262.3	269.9	232.5	216.9	333.7	0.87	0.77	0.88	0.92	0.85	0.81	0.620820	1.000000	-
Rv1873	-	9	313.7	273.1	303.9	290.8	261.8	252.5	0.045	-0.151	0.000	-0.062	-0.211	-0.263	313.7	273.1	303.9	302.0	261.8	252.5	1.00	1.00	1.00	0.96	1.00	1.00	0.960831	1.000000	-
Rv1874	-	11	189.6	198.8	187.3	202.8	197.1	194.8	0.017	0.084	0.000	0.112	0.072	0.056	223.4	218.7	206.0	215.9	216.8	194.8	0.85	0.91	0.91	0.94	0.91	1.00	0.868574	1.000000	-
Rv1875	-	4	224.7	247.3	169.6	243.7	246.6	235.5	0.395	0.531	0.000	0.511	0.527	0.462	269.6	282.6	226.1	265.9	281.8	269.1	0.83	0.88	0.75	0.92	0.88	0.88	0.998908	1.000000	-
Rv1876	bfrA	10	138.7	152.1	139.1	158.0	150.7	169.6	-0.004	0.124	0.000	0.178	0.112	0.277	138.7	160.1	146.4	158.0	150.7	169.6	1.00	0.95	0.95	1.00	1.00	1.00	0.700616	1.000000	-
Rv1877	-	30	193.0	178.0	174.0	173.0	179.7	191.6	0.146	0.032	0.000	-0.008	0.045	0.136	199.7	190.8	180.0	185.3	185.9	201.7	0.97	0.93	0.97	0.93	0.97	0.95	0.934214	1.000000	-
Rv1878	glnA3	26	84.9	64.2	83.0	78.2	75.7	75.9	0.032	-0.346	0.000	-0.080	-0.124	-0.121	101.9	85.6	100.3	93.8	93.8	96.3	0.83	0.75	0.83	0.83	0.81	0.79	0.932615	1.000000	-
Rv1879	-	17	45.6	72.0	59.6	76.9	72.4	61.4	-0.352	0.254	0.000	0.342	0.260	0.040	55.4	79.0	75.0	80.0	79.4	67.3	0.82	0.91	0.79	0.96	0.91	0.91	0.187132	1.000000	-
Rv1880c	cyp140	15	109.7	102.6	121.1	107.6	111.9	94.7	-0.137	-0.229	0.000	-0.163	-0.109	-0.339	123.4	109.9	129.7	124.2	129.1	101.4	0.89	0.93	0.93	0.87	0.87	0.93	0.957560	1.000000	-
Rv1881c	lppE	8	57.8	66.7	49.7	64.5	56.6	72.2	0.199	0.391	0.000	0.345	0.172	0.497	77.1	88.9	66.3	81.4	64.7	77.0	0.75	0.75	0.75	0.79	0.88	0.94	0.898678	1.000000	-
Rv1882c	-	14	189.6	204.6	207.1	208.7	200.5	197.1	-0.124	-0.017	0.000	0.011	-0.046	-0.070	189.6	204.6	207.1	208.7	200.5	197.1	1.00	1.00	1.00	1.00	1.00	1.00	0.996554	1.000000	-
Rv1883c	-	6	182.1	193.9	184.7	202.0	172.1	198.0	-0.020	0.068	0.000	0.125	-0.099	0.098	182.1	193.9	184.7	202.0	172.1	198.0	1.00	1.00	1.00	1.00	1.00	1.00	0.992510	1.000000	-
Rv1884c	rpfC	5	44.8	50.9	32.6	49.1	49.8	82.0	0.406	0.573	0.000	0.526	0.544	1.211	51.7	63.6	54.3	56.7	62.3	82.0	0.87	0.80	0.60	0.87	0.80	1.00	0.353007	1.000000	-
Rv1885c	-	9	166.4	130.2	147.7	160.9	171.9	138.4	0.167	-0.175	0.000	0.120	0.213	-0.091	166.4	130.2	147.7	160.9	171.9	155.7	1.00	1.00	1.00	1.00	1.00	0.89	0.392302	1.000000	-
Rv1886c	fbpB	23	138.0	144.8	128.4	130.7	137.1	158.6	0.100	0.167	0.000	0.025	0.092	0.295	144.3	144.8	144.1	143.2	143.4	165.8	0.96	1.00	0.89	0.91	0.96	0.96	0.348191	1.000000	-
Rv1887	-	19	188.9	161.3	192.2	173.0	186.5	146.2	-0.024	-0.245	0.000	-0.147	-0.042	-0.383	215.3	204.3	243.4	201.3	214.8	168.3	0.88	0.79	0.79	0.86	0.87	0.87	0.945144	1.000000	-
Rv1888c	-	13	106.8	96.5	109.5	103.9	111.7	97.2	-0.035	-0.173	0.000	-0.072	0.028	-0.164	119.0	109.1	135.5	112.6	121.0	114.9	0.90	0.88	0.81	0.92	0.92	0.85	0.952938	1.000000	-
Rv1888A	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1889c	-	3	266.2	162.0	176.3	164.9	195.0	209.0	0.581	-0.118	0.000	-0.094	0.142	0.240	399.2	243.0	264.4	164.9	292.4	313.6	0.67	0.67	0.67	1.00	0.67	0.67	0.481978	1.000000	-
Rv1890c	-	8	98.6	91.6	88.9	92.3	113.2	82.8	0.141	0.041	0.000	0.052	0.332	-0.098	112.7	97.7	101.6	92.3	113.2	88.3	0.88	0.94	0.88	1.00	1.00	0.94	0.625706	1.000000	-
Rv1891	-	8	292.8	230.8	232.7	254.7	179.1	209.8	0.325	-0.012	0.000	0.128	-0.369	-0.146	292.8	230.8	248.3	254.7	179.1	209.8	1.00	1.00	0.94	1.00	1.00	1.00	0.714671	1.000000	-
Rv1892	-	7	307.8	254.2	284.1	272.0	298.2	247.9	0.114	-0.157	0.000	-0.062	0.069	-0.193	340.2	273.8	331.4	285.6	298.2	247.9	0.90	0.93	0.86	0.95	1.00	1.00	0.957221	1.000000	-
Rv1893	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv1894c	-	11	183.2	139.9	158.0	146.6	155.0	161.8	0.208	-0.170	0.000	-0.105	-0.027	0.033	252.0	162.0	217.3	179.2	179.5	187.4	0.73	0.86	0.73	0.82	0.86	0.86	0.964964	1.000000	-
Rv1895	-	17	109.4	77.4	102.5	94.9	97.6	94.1	0.090	-0.384	0.000	-0.105	-0.067	-0.118	111.6	90.7	116.2	105.3	114.5	110.3	0.98	0.85	0.88	0.90	0.85	0.85	0.274202	1.000000	-
Rv1896c	-	21	125.5	106.4	120.7	134.3	100.0	112.1	0.054	-0.175	0.000	0.148	-0.260	-0.103	143.7	127.7	140.8	151.1	110.5	134.5	0.87	0.83	0.86	0.89	0.90	0.83	0.952851	1.000000	-
Rv1897c	-	4	173.7	68.9	181.1	167.8	156.7	143.3	-0.058	-1.331	0.000	-0.107	-0.202	-0.327	231.6	110.3	241.4	223.8	209.0	191.1	0.75	0.62	0.75	0.75	0.75	0.75	0.585419	1.000000	-
Rv1898	-	3	243.6	226.9	231.1	245.7	224.1	206.5	0.074	-0.026	0.000	0.087	-0.044	-0.159	243.6	226.9	277.3	245.7	224.1	309.8	1.00	1.00	0.83	1.00	1.00	0.67	0.417712	1.000000	-
Rv1899c	lppD	10	242.3	253.2	268.7	241.0	263.8	244.9	-0.146	-0.084	0.000	-0.154	-0.026	-0.131	242.3	253.2	268.7	241.0	263.8	244.9	1.00	1.00	1.00	1.00	1.00	1.00	0.997932	1.000000	-
Rv1900c	lipJ	19	110.0	131.3	125.4	130.6	122.0	114.7	-0.182	0.064	0.000	0.056	-0.039	-0.124	125.4	142.6	158.9	148.9	132.4	117.8	0.88	0.92	0.79	0.88	0.92	0.97	0.573415	1.000000	-
Rv1901	cinA	17	111.6	137.7	137.8	134.3	134.9	135.1	-0.292	-0.000	0.000	-0.036	-0.029	-0.027	123.7	146.3	161.5	152.2	143.3	148.2	0.90	0.94	0.85	0.88	0.94	0.91	0.828655	1.000000	-
Rv1902c	nanT	30	108.1	110.8	103.1	96.6	103.2	96.9	0.064	0.099	0.000	-0.090	0.001	-0.086	121.6	114.7	112.5	102.3	110.5	100.2	0.89	0.97	0.92	0.94	0.93	0.97	0.847569	1.000000	-
Rv1903	-	5	72.9	62.1	88.2	73.1	85.6	94.7	-0.258	-0.473	0.000	-0.255	-0.041	0.098	91.2	77.7	98.0	91.4	107.0	118.4	0.80	0.80	0.90	0.80	0.80	0.80	0.994713	1.000000	-
Rv1904	-	10	338.0	307.5	372.4	310.8	325.8	300.6	-0.138	-0.272	0.000	-0.257	-0.190	-0.304	405.6	361.8	372.4	345.3	325.8	375.7	0.83	0.85	1.00	0.90	1.00	0.80	0.259513	1.000000	-
Rv1905c	aao	17	152.1	151.8	153.7	138.0	133.9	151.3	-0.015	-0.017	0.000	-0.150	-0.191	-0.021	161.6	156.4	163.3	140.8	146.9	155.9	0.94	0.97	0.94	0.98	0.91	0.97	0.958030	1.000000	-
Rv1906c	-	9	98.2	115.0	115.3	149.3	154.2	88.0	-0.221	-0.003	0.000	0.360	0.405	-0.371	126.3	147.9	148.2	161.2	173.5	105.6	0.78	0.78	0.78	0.93	0.89	0.83	0.727632	1.000000	-
Rv1907c	-	10	56.1	76.0	70.9	77.8	58.1	87.5	-0.312	0.094	0.000	0.126	-0.266	0.286	70.2	84.4	83.4	97.3	68.4	97.2	0.80	0.90	0.85	0.80	0.85	0.90	0.860360	1.000000	-
Rv1908c	katG	34	55.5	76.0	58.0	94.9	94.3	82.7	-0.059	0.362	0.000	0.664	0.656	0.476	68.2	84.7	75.9	104.0	98.7	87.9	0.81	0.90	0.76	0.91	0.96	0.94	0.000237	0.005570	-
Rv1909c	furA	9	74.1	94.1	95.3	104.4	116.2	105.3	-0.343	-0.017	0.000	0.125	0.273	0.138	100.0	105.9	122.5	122.5	130.7	145.8	0.74	0.89	0.78	0.85	0.89	0.72	0.859253	1.000000	-
Rv1910c	-	12	208.0	183.3	201.5	216.5	155.7	166.3	0.045	-0.134	0.000	0.101	-0.362	-0.269	214.0	191.2	210.3	236.2	155.7	166.3	0.97	0.96	0.96	0.92	1.00	1.00	0.517640	1.000000	-
Rv1911c	lppC	8	93.4	98.3	115.1	117.9	86.5	85.4	-0.287	-0.218	0.000	0.033	-0.392	-0.411	97.5	112.3	131.6	134.7	86.5	91.1	0.96	0.88	0.88	0.88	1.00	0.94	0.665720	1.000000	-
Rv1912c	fadB5	13	106.6	103.1	112.1	87.6	133.3	76.5	-0.070	-0.116	0.000	-0.339	0.239	-0.524	109.4	121.8	121.5	110.2	150.7	104.7	0.97	0.85	0.92	0.79	0.88	0.73	0.054464	0.501874	-
Rv1913	-	10	173.8	146.9	176.3	159.2	133.9	160.4	-0.020	-0.256	0.000	-0.143	-0.385	-0.133	193.1	163.2	195.9	176.9	148.8	178.2	0.90	0.90	0.90	0.90	0.90	0.90	0.999915	1.000000	-
Rv1914c	-	5	45.2	54.0	64.5	52.6	59.4	63.3	-0.468	-0.237	0.000	-0.270	-0.110	-0.024	56.5	60.0	80.6	65.8	74.2	79.2	0.80	0.90	0.80	0.80	0.80	0.80	0.912378	1.000000	-
Rv1915	aceAa	21	128.8	135.7	138.8	145.2	131.3	125.7	-0.104	-0.032	0.000	0.063	-0.077	-0.137	137.5	142.4	149.5	145.2	134.5	125.7	0.94	0.95	0.93	1.00	0.98	1.00	0.484877	1.000000	-
Rv1916	aceAb	16	76.2	90.3	110.0	87.7	84.2	112.3	-0.503	-0.271	0.000	-0.311	-0.367	0.028	87.0	90.3	113.5	100.2	89.8	115.9	0.88	1.00	0.97	0.88	0.94	0.97	0.112158	0.786486	-
Rv1917c	PPE34	114	32.0	29.4	30.8	30.9	28.1	30.6	0.047	-0.061	0.000	0.003	-0.116	-0.008	70.2	57.2	68.3	66.9	61.5	61.8	0.46	0.51	0.45	0.46	0.46	0.50	0.867402	1.000000	-
Rv1918c	PPE35	71	37.4	38.8	36.4	36.7	38.4	45.9	0.035	0.081	0.000	0.009	0.067	0.298	75.2	63.3	69.9	69.2	58.0	68.6	0.50	0.61	0.52	0.53	0.66	0.67	0.294128	1.000000	-
Rv1919c	-	7	182.8	206.4	213.6	210.8	204.6	214.6	-0.219	-0.048	0.000	-0.018	-0.061	0.007	239.9	222.3	249.2	210.8	204.6	250.4	0.76	0.93	0.86	1.00	1.00	0.86	0.366184	1.000000	-
Rv1920	-	11	166.4	151.6	176.8	164.5	157.7	166.3	-0.085	-0.215	0.000	-0.101	-0.160	-0.086	183.0	185.3	216.1	193.9	216.8	203.3	0.91	0.82	0.82	0.85	0.73	0.82	0.785944	1.000000	-
Rv1921c	lppF	20	132.9	111.5	125.0	122.7	128.9	125.4	0.084	-0.159	0.000	-0.027	0.042	0.004	156.3	120.5	147.1	136.3	139.3	147.5	0.85	0.93	0.85	0.90	0.93	0.85	0.966412	1.000000	-
Rv1922	-	19	81.5	75.1	83.3	86.6	83.7	84.1	-0.030	-0.140	0.000	0.053	0.006	0.013	105.6	81.6	105.5	100.8	90.9	88.8	0.77	0.92	0.79	0.86	0.92	0.95	0.568830	1.000000	-
Rv1923	lipD	28	148.9	167.0	136.0	160.7	159.0	197.4	0.126	0.286	0.000	0.232	0.218	0.521	158.3	173.1	141.1	164.6	161.9	204.7	0.94	0.96	0.96	0.98	0.98	0.96	0.375789	1.000000	-
Rv1924c	-	9	188.2	186.5	171.0	181.5	163.7	179.2	0.134	0.121	0.000	0.084	-0.061	0.065	188.2	197.4	171.0	204.2	184.1	179.2	1.00	0.94	1.00	0.89	0.89	1.00	0.381161	1.000000	-
Rv1925	fadD31	34	127.3	162.9	99.5	165.5	169.4	183.5	0.340	0.684	0.000	0.706	0.739	0.851	139.6	165.3	114.7	177.7	171.9	194.9	0.91	0.99	0.87	0.93	0.99	0.94	0.000439	0.009629	-
Rv1926c	mpt63	8	3.5	5.1	3.5	5.2	5.9	8.2	0.004	0.243	0.000	0.266	0.353	0.630	21.2	16.2	18.7	25.1	15.7	16.4	0.17	0.31	0.19	0.21	0.38	0.50	0.474480	1.000000	-
Rv1927	-	16	189.3	187.1	150.8	142.3	154.2	133.2	0.319	0.303	0.000	-0.081	0.031	-0.173	216.3	187.1	160.8	145.3	164.4	142.1	0.88	1.00	0.94	0.98	0.94	0.94	0.292766	1.000000	-
Rv1928c	-	17	72.5	84.9	72.3	82.5	71.1	90.3	0.004	0.217	0.000	0.178	-0.023	0.302	86.0	90.2	84.8	97.8	78.0	93.1	0.84	0.94	0.85	0.84	0.91	0.97	0.705700	1.000000	-
Rv1929c	-	9	50.5	69.0	51.7	64.0	69.7	54.1	-0.030	0.385	0.000	0.283	0.398	0.060	59.3	73.1	84.6	69.1	73.8	60.9	0.85	0.94	0.61	0.93	0.94	0.89	0.362551	1.000000	-
Rv1930c	-	4	34.8	38.3	33.6	30.6	38.8	47.2	0.045	0.169	0.000	-0.117	0.183	0.438	46.4	51.1	44.7	45.8	62.1	63.0	0.75	0.75	0.75	0.67	0.62	0.75	0.922502	1.000000	-
Rv1931c	-	2	226.6	193.5	198.1	211.9	186.7	131.2	0.189	-0.033	0.000	0.095	-0.083	-0.576	226.6	193.5	198.1	211.9	186.7	131.2	1.00	1.00	1.00	1.00	1.00	1.00	0.377971	1.000000	-
Rv1932	tpx	7	109.9	169.5	147.4	173.7	125.6	147.2	-0.408	0.196	0.000	0.230	-0.223	-0.002	109.9	182.6	147.4	202.7	125.6	147.2	1.00	0.93	1.00	0.86	1.00	1.00	0.018075	0.217884	-
Rv1933c	fadE18	9	163.6	178.9	134.8	147.3	184.8	145.0	0.270	0.396	0.000	0.123	0.441	0.102	184.1	178.9	142.8	159.1	184.8	163.2	0.89	1.00	0.94	0.93	1.00	0.89	0.666942	1.000000	-
Rv1934c	fadE17	11	139.2	146.2	134.3	162.0	144.0	140.4	0.049	0.118	0.000	0.261	0.097	0.062	148.1	146.2	134.3	178.2	158.4	140.4	0.94	1.00	1.00	0.91	0.91	1.00	0.356480	1.000000	-
Rv1935c	echA13	10	175.9	187.9	171.2	151.8	155.0	178.0	0.038	0.130	0.000	-0.169	-0.139	0.055	211.1	187.9	214.0	175.1	155.0	187.4	0.83	1.00	0.80	0.87	1.00	0.95	0.280422	1.000000	-
Rv1936	-	15	147.0	148.7	137.2	147.6	136.5	136.5	0.095	0.112	0.000	0.101	-0.007	-0.007	165.3	171.6	158.4	170.3	146.3	146.3	0.89	0.87	0.87	0.87	0.93	0.93	0.995051	1.000000	-
Rv1937	-	44	90.7	84.5	91.0	81.4	91.8	82.3	-0.005	-0.102	0.000	-0.152	0.012	-0.138	106.9	95.3	97.7	93.5	99.8	89.4	0.85	0.89	0.93	0.87	0.92	0.92	0.712795	1.000000	-
Rv1938	ephB	16	86.4	71.4	68.5	62.4	77.3	43.0	0.314	0.055	0.000	-0.126	0.162	-0.616	106.4	108.8	91.4	83.2	79.7	50.9	0.81	0.66	0.75	0.75	0.97	0.84	0.003788	0.062190	-
Rv1939	-	5	82.2	77.5	68.8	68.5	67.1	67.5	0.239	0.160	0.000	-0.005	-0.034	-0.026	102.7	110.7	86.0	85.7	83.9	84.4	0.80	0.70	0.80	0.80	0.80	0.80	0.986231	1.000000	-
Rv1940	ribA1	8	148.8	148.4	147.6	133.0	156.2	148.9	0.012	0.008	0.000	-0.145	0.079	0.012	148.8	148.4	147.6	133.0	156.2	148.9	1.00	1.00	1.00	1.00	1.00	1.00	0.993165	1.000000	-
Rv1941	-	3	164.3	126.1	98.1	137.7	116.1	96.2	0.716	0.347	0.000	0.469	0.232	-0.027	164.3	126.1	147.1	137.7	174.1	144.2	1.00	1.00	0.67	1.00	0.67	0.67	0.100026	0.743211	-
Rv1942c	-	2	124.1	163.7	195.9	147.8	128.1	54.1	-0.638	-0.251	0.000	-0.394	-0.593	-1.766	148.9	163.7	195.9	147.8	128.1	54.1	0.83	1.00	1.00	1.00	1.00	1.00	0.398460	1.000000	-
Rv1943c	-	10	56.4	89.2	85.4	79.1	77.9	86.0	-0.558	0.060	0.000	-0.103	-0.124	0.009	105.7	127.5	131.4	139.6	103.9	114.6	0.53	0.70	0.65	0.57	0.75	0.75	0.925113	1.000000	-
Rv1944c	-	7	59.5	51.8	85.6	61.2	53.4	57.6	-0.490	-0.674	0.000	-0.453	-0.635	-0.533	78.1	60.4	85.6	67.6	57.5	67.2	0.76	0.86	1.00	0.90	0.93	0.86	0.559731	1.000000	-
Rv1945	-	19	104.6	99.3	117.5	113.7	109.7	102.3	-0.161	-0.233	0.000	-0.046	-0.095	-0.191	124.2	110.9	135.4	117.9	119.1	129.6	0.84	0.89	0.87	0.96	0.92	0.79	0.411395	1.000000	-
Rv1946c	lppG	7	90.9	96.8	79.1	101.5	103.5	119.6	0.190	0.276	0.000	0.341	0.368	0.568	127.3	123.2	100.6	118.4	111.5	139.5	0.71	0.79	0.79	0.86	0.93	0.86	0.927537	1.000000	-
Rv1947	-	3	134.4	185.2	138.2	192.2	179.9	168.8	-0.039	0.410	0.000	0.462	0.369	0.279	134.4	185.2	138.2	192.2	179.9	168.8	1.00	1.00	1.00	1.00	1.00	1.00	0.847907	1.000000	-
Rv1948c	-	15	33.5	40.4	32.0	43.2	35.9	34.7	0.057	0.298	0.000	0.383	0.145	0.104	51.9	48.5	50.5	57.2	51.2	41.7	0.64	0.83	0.63	0.76	0.70	0.83	0.711732	1.000000	-
Rv1949c	-	17	39.7	42.7	44.7	38.3	50.6	43.9	-0.152	-0.058	0.000	-0.197	0.164	-0.023	96.4	103.7	94.9	102.9	101.3	87.7	0.41	0.41	0.47	0.37	0.50	0.50	0.991892	1.000000	-
Rv1950c	-	5	101.2	121.6	118.4	128.3	120.7	137.4	-0.217	0.037	0.000	0.111	0.027	0.206	108.4	121.6	118.4	128.3	120.7	137.4	0.93	1.00	1.00	1.00	1.00	1.00	0.901255	1.000000	-
Rv1951c	-	5	3.8	2.0	3.8	1.0	2.9	3.2	-0.001	-0.320	0.000	-0.561	-0.156	-0.093	28.4	10.2	37.9	14.4	28.9	10.8	0.13	0.20	0.10	0.07	0.10	0.30	0.114706	0.798738	-
Rv1952	-	2	139.1	104.6	125.3	89.9	95.7	135.0	0.145	-0.250	0.000	-0.459	-0.373	0.103	139.1	104.6	125.3	89.9	95.7	135.0	1.00	1.00	1.00	1.00	1.00	1.00	0.665175	1.000000	-
Rv1953	-	9	53.2	44.8	54.5	45.4	47.2	42.9	-0.032	-0.257	0.000	-0.241	-0.190	-0.312	95.8	89.6	89.2	72.1	106.2	70.3	0.56	0.50	0.61	0.63	0.44	0.61	0.926973	1.000000	-
Rv1954c	-	7	84.5	56.1	51.9	57.1	55.8	65.3	0.653	0.101	0.000	0.126	0.095	0.305	104.4	65.4	80.8	66.7	65.1	76.2	0.81	0.86	0.64	0.86	0.86	0.86	0.900613	1.000000	-
Rv1955	-	9	68.2	47.6	70.3	71.3	57.8	68.9	-0.041	-0.519	0.000	0.019	-0.263	-0.028	92.1	61.2	115.1	96.3	69.3	77.5	0.74	0.78	0.61	0.74	0.83	0.89	0.823935	1.000000	-
Rv1956	-	8	132.6	134.0	154.2	97.4	111.8	150.6	-0.211	-0.196	0.000	-0.637	-0.448	-0.033	187.2	178.6	205.7	137.5	149.0	200.9	0.71	0.75	0.75	0.71	0.75	0.75	0.979989	1.000000	-
Rv1957	-	13	188.4	166.1	164.0	96.8	85.3	170.1	0.195	0.018	0.000	-0.730	-0.903	0.052	204.1	179.9	185.4	102.1	88.8	184.3	0.92	0.92	0.88	0.95	0.96	0.92	0.031172	0.336157	-
Rv1958c	-	11	107.2	107.5	117.7	101.6	92.5	119.8	-0.128	-0.125	0.000	-0.203	-0.331	0.025	131.1	131.4	161.8	128.9	101.7	131.8	0.82	0.82	0.73	0.79	0.91	0.91	0.929718	1.000000	-
Rv1959c	-	5	157.1	162.5	207.4	188.5	181.8	166.8	-0.390	-0.342	0.000	-0.134	-0.185	-0.306	235.7	203.1	259.2	235.7	227.2	238.3	0.67	0.80	0.80	0.80	0.80	0.70	0.999498	1.000000	-
Rv1960c	-	3	144.6	166.4	157.5	146.9	111.6	120.2	-0.120	0.077	0.000	-0.098	-0.480	-0.377	144.6	166.4	157.5	220.4	167.4	180.2	1.00	1.00	1.00	0.67	0.67	0.67	0.075017	0.623916	-
Rv1961	-	8	230.3	237.7	217.5	220.4	239.2	286.0	0.081	0.125	0.000	0.019	0.134	0.387	240.3	237.7	217.5	220.4	239.2	286.0	0.96	1.00	1.00	1.00	1.00	1.00	0.854831	1.000000	-
Rv1962c	-	13	152.1	182.8	160.8	158.1	160.5	178.7	-0.078	0.180	0.000	-0.024	-0.003	0.148	164.8	198.0	174.2	171.2	173.9	178.7	0.92	0.92	0.92	0.92	0.92	1.00	0.860125	1.000000	-
Rv1963c	mce3R	16	48.8	75.7	68.4	56.4	58.3	70.1	-0.448	0.137	0.000	-0.255	-0.212	0.034	63.3	86.5	75.4	63.0	66.7	80.1	0.77	0.88	0.91	0.90	0.88	0.88	0.380522	1.000000	-
Rv1964	yrbE3A	6	185.2	193.5	202.7	184.4	206.2	210.4	-0.127	-0.066	0.000	-0.133	0.024	0.053	185.2	232.2	243.3	184.4	206.2	210.4	1.00	0.83	0.83	1.00	1.00	1.00	0.454384	1.000000	-
Rv1965	yrbE3B	13	216.7	242.7	239.8	224.6	222.2	223.4	-0.143	0.017	0.000	-0.092	-0.108	-0.100	222.4	242.7	259.8	243.3	240.7	223.4	0.97	1.00	0.92	0.92	0.92	1.00	0.682436	1.000000	-
Rv1966	mce3A	15	173.6	171.1	171.5	169.7	159.7	156.9	0.017	-0.003	0.000	-0.015	-0.100	-0.124	195.3	183.3	183.7	181.8	171.1	168.1	0.89	0.93	0.93	0.93	0.93	0.93	0.999958	1.000000	-
Rv1967	mce3B	12	225.7	257.5	194.9	256.1	197.7	225.8	0.207	0.393	0.000	0.385	0.020	0.207	232.2	257.5	203.4	279.3	197.7	225.8	0.97	1.00	0.96	0.92	1.00	1.00	0.282328	1.000000	-
Rv1968	mce3C	12	86.3	97.3	97.6	94.3	82.7	91.1	-0.169	-0.005	0.000	-0.047	-0.226	-0.095	119.4	155.6	137.8	125.8	94.6	121.5	0.72	0.62	0.71	0.75	0.88	0.75	0.738936	1.000000	-
Rv1969	mce3D	13	224.4	164.1	215.2	192.4	212.6	182.7	0.059	-0.381	0.000	-0.158	-0.018	-0.230	224.4	170.7	215.2	197.5	212.6	206.6	1.00	0.96	1.00	0.97	1.00	0.88	0.244577	1.000000	-
Rv1970	lprM	6	56.4	89.1	58.2	94.3	87.4	86.3	-0.041	0.574	0.000	0.651	0.548	0.531	67.7	89.1	69.8	106.0	95.3	86.3	0.83	1.00	0.83	0.89	0.92	1.00	0.434899	1.000000	-
Rv1971	mce3F	18	159.6	175.2	132.6	193.3	165.6	173.9	0.258	0.389	0.000	0.527	0.310	0.379	191.5	175.2	149.2	197.0	165.6	173.9	0.83	1.00	0.89	0.98	1.00	1.00	0.011136	0.149609	-
Rv1972	-	4	184.4	197.4	147.7	161.5	176.9	121.9	0.311	0.407	0.000	0.126	0.253	-0.267	184.4	197.4	147.7	161.5	176.9	162.5	1.00	1.00	1.00	1.00	1.00	0.75	0.431393	1.000000	-
Rv1973	-	4	329.8	239.9	253.5	362.4	222.3	222.6	0.373	-0.078	0.000	0.508	-0.185	-0.183	329.8	239.9	253.5	362.4	222.3	222.6	1.00	1.00	1.00	1.00	1.00	1.00	0.689444	1.000000	-
Rv1974	-	8	157.3	145.0	174.2	151.4	135.4	160.6	-0.142	-0.256	0.000	-0.196	-0.351	-0.114	157.3	145.0	174.2	151.4	135.4	160.6	1.00	1.00	1.00	1.00	1.00	1.00	0.918198	1.000000	-
Rv1975	-	12	208.3	181.8	173.4	202.8	202.1	210.3	0.258	0.066	0.000	0.220	0.215	0.272	214.3	198.3	189.1	221.2	202.1	229.4	0.97	0.92	0.92	0.92	1.00	0.92	0.770804	1.000000	-
Rv1976c	-	3	337.9	235.4	160.4	267.2	235.8	211.4	1.052	0.539	0.000	0.719	0.542	0.388	337.9	235.4	160.4	267.2	235.8	211.4	1.00	1.00	1.00	1.00	1.00	1.00	0.845534	1.000000	-
Rv1977	-	12	127.1	111.9	110.2	110.9	134.4	117.4	0.197	0.021	0.000	0.008	0.275	0.087	138.7	116.7	126.0	120.9	134.4	122.5	0.92	0.96	0.88	0.92	1.00	0.96	0.885129	1.000000	-
Rv1978	-	13	221.0	214.6	213.1	210.4	204.0	200.1	0.051	0.010	0.000	-0.018	-0.061	-0.089	269.4	242.6	251.8	248.6	241.1	208.1	0.82	0.88	0.85	0.85	0.85	0.96	0.974553	1.000000	-
Rv1979c	-	33	143.3	152.9	142.1	126.8	128.4	140.5	0.011	0.102	0.000	-0.159	-0.141	-0.016	159.4	162.7	153.8	130.8	134.6	142.7	0.90	0.94	0.92	0.97	0.95	0.98	0.546619	1.000000	-
Rv1980c	mpt64	19	133.8	135.8	134.6	138.4	127.4	165.8	-0.009	0.012	0.000	0.039	-0.076	0.291	162.2	161.2	165.0	157.8	134.5	203.2	0.82	0.84	0.82	0.88	0.95	0.82	0.431102	1.000000	-
Rv1981c	nrdF	22	165.7	166.3	136.5	150.6	144.6	146.4	0.270	0.276	0.000	0.137	0.081	0.098	191.8	178.5	154.0	162.9	159.1	161.0	0.86	0.93	0.89	0.92	0.91	0.91	0.983060	1.000000	-
Rv1982c	-	4	308.2	300.3	229.8	292.6	299.4	277.4	0.415	0.379	0.000	0.342	0.374	0.266	336.2	300.3	262.6	292.6	342.2	277.4	0.92	1.00	0.88	1.00	0.88	1.00	0.909943	1.000000	-
Rv1983	PE_PGRS35	29	156.3	152.0	138.0	150.9	153.1	148.3	0.174	0.135	0.000	0.125	0.145	0.101	191.5	169.6	163.3	168.3	164.4	148.3	0.82	0.90	0.84	0.90	0.93	1.00	0.086092	0.684368	-
Rv1984c	cfp21	13	127.2	142.9	122.7	138.7	138.0	163.5	0.050	0.212	0.000	0.170	0.163	0.401	165.4	185.8	167.9	180.3	163.0	202.5	0.77	0.77	0.73	0.77	0.85	0.81	0.971464	1.000000	-
Rv1985c	-	13	190.8	182.5	226.7	226.5	205.7	199.0	-0.242	-0.305	0.000	-0.001	-0.137	-0.183	190.8	182.5	235.7	232.5	205.7	199.0	1.00	1.00	0.96	0.97	1.00	1.00	0.813818	1.000000	-
Rv1986	-	8	199.8	290.0	224.2	248.7	215.2	158.7	-0.163	0.364	0.000	0.147	-0.058	-0.485	199.8	290.0	298.9	248.7	245.9	181.4	1.00	1.00	0.75	1.00	0.88	0.88	0.023554	0.267749	-
Rv1987	-	7	156.1	151.9	144.3	133.8	147.1	156.6	0.110	0.072	0.000	-0.105	0.027	0.115	182.1	177.3	168.3	156.1	171.6	182.7	0.86	0.86	0.86	0.86	0.86	0.86	0.999973	1.000000	-
Rv1988	-	6	193.5	132.9	133.9	146.5	134.7	171.1	0.515	-0.011	0.000	0.125	0.009	0.343	204.9	132.9	146.1	146.5	134.7	171.1	0.94	1.00	0.92	1.00	1.00	1.00	0.837848	1.000000	-
Rv1989c	-	10	208.6	219.9	205.4	220.0	190.4	228.8	0.022	0.096	0.000	0.097	-0.107	0.152	208.6	219.9	205.4	220.0	190.4	228.8	1.00	1.00	1.00	1.00	1.00	1.00	0.975263	1.000000	-
Rv1990c	-	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv1990A	-	4	156.3	188.3	210.3	192.3	247.2	193.9	-0.417	-0.155	0.000	-0.126	0.228	-0.114	156.3	188.3	240.4	256.4	247.2	221.6	1.00	1.00	0.88	0.75	1.00	0.88	0.376748	1.000000	-
Rv1991c	-	4	207.3	255.1	255.3	272.7	222.9	285.0	-0.294	-0.001	0.000	0.093	-0.192	0.156	207.3	255.1	255.3	272.7	222.9	285.0	1.00	1.00	1.00	1.00	1.00	1.00	0.886271	1.000000	-
Rv1992c	ctpG	31	221.5	203.7	209.2	197.5	218.0	209.6	0.080	-0.037	0.000	-0.081	0.058	0.003	239.5	210.5	235.8	213.6	229.1	216.6	0.92	0.97	0.89	0.92	0.95	0.97	0.927415	1.000000	-
Rv1993c	-	4	222.9	188.9	197.7	226.0	190.1	210.8	0.169	-0.064	0.000	0.188	-0.055	0.090	222.9	251.9	197.7	246.5	190.1	210.8	1.00	0.75	1.00	0.92	1.00	1.00	0.625969	1.000000	-
Rv1994c	-	6	162.7	144.6	212.5	124.8	150.7	131.0	-0.375	-0.540	0.000	-0.745	-0.482	-0.677	183.0	144.6	231.8	149.7	164.4	157.2	0.89	1.00	0.92	0.83	0.92	0.83	0.922253	1.000000	-
Rv1995	-	7	455.0	435.7	483.6	512.6	464.4	457.0	-0.087	-0.149	0.000	0.083	-0.058	-0.081	530.8	508.3	564.2	598.0	541.8	533.2	0.86	0.86	0.86	0.86	0.86	0.86	0.999952	1.000000	-
Rv1996	-	12	275.8	270.6	217.8	247.1	217.7	268.9	0.334	0.307	0.000	0.179	-0.000	0.298	320.2	295.2	248.9	287.0	217.7	268.9	0.86	0.92	0.88	0.86	1.00	1.00	0.294196	1.000000	-
Rv1997	ctpF	23	128.5	129.6	127.3	116.2	123.7	111.1	0.013	0.025	0.000	-0.126	-0.039	-0.189	167.3	141.9	146.4	131.5	138.8	118.8	0.77	0.91	0.87	0.88	0.89	0.93	0.618482	1.000000	-
Rv1998c	-	17	55.7	70.8	70.2	72.6	69.1	62.4	-0.308	0.011	0.000	0.046	-0.020	-0.158	88.8	100.2	103.7	97.4	81.1	75.7	0.63	0.71	0.68	0.75	0.85	0.82	0.746955	1.000000	-
Rv1999c	-	23	222.5	210.3	203.1	214.5	197.1	172.5	0.129	0.049	0.000	0.077	-0.042	-0.230	255.9	225.0	239.6	235.0	206.1	188.9	0.87	0.93	0.85	0.91	0.96	0.91	0.933421	1.000000	-
Rv2000	-	32	106.4	118.6	108.4	102.5	106.8	119.3	-0.025	0.124	0.000	-0.077	-0.021	0.132	114.8	122.4	113.7	106.9	112.0	123.1	0.93	0.97	0.95	0.96	0.95	0.97	0.883606	1.000000	-
Rv2001	-	13	103.6	103.7	95.7	112.2	103.8	85.4	0.108	0.110	0.000	0.219	0.112	-0.156	139.3	112.3	131.0	125.1	150.0	92.5	0.74	0.92	0.73	0.90	0.69	0.92	0.129564	0.863040	-
Rv2002	fabG3	9	60.6	55.7	59.3	78.7	87.2	71.2	0.027	-0.084	0.000	0.379	0.519	0.244	68.1	59.0	82.1	106.2	98.1	80.0	0.89	0.94	0.72	0.74	0.89	0.89	0.095980	0.725300	-
Rv2003c	-	12	46.1	71.0	55.5	44.9	55.1	46.7	-0.244	0.330	0.000	-0.278	-0.009	-0.227	66.4	94.7	78.3	70.3	69.6	65.9	0.69	0.75	0.71	0.64	0.79	0.71	0.920001	1.000000	-
Rv2004c	-	24	79.7	67.5	70.4	68.7	68.4	59.2	0.168	-0.057	0.000	-0.034	-0.040	-0.232	110.4	87.6	91.4	88.3	86.4	76.9	0.72	0.77	0.77	0.78	0.79	0.77	0.977505	1.000000	-
Rv2005c	-	10	47.5	46.6	49.7	32.3	50.0	56.5	-0.059	-0.084	0.000	-0.553	0.006	0.168	67.9	84.8	71.0	48.4	71.4	86.9	0.70	0.55	0.70	0.67	0.70	0.65	0.599714	1.000000	-
Rv2006	otsB1	78	66.3	46.3	59.0	53.6	51.9	51.8	0.156	-0.320	0.000	-0.128	-0.168	-0.171	90.7	65.0	84.4	75.0	74.3	72.8	0.73	0.71	0.70	0.71	0.70	0.71	0.370542	1.000000	-
Rv2007c	fdxA	6	52.1	31.4	34.3	36.5	47.2	22.4	0.538	-0.110	0.000	0.077	0.409	-0.523	55.1	31.4	51.5	36.5	47.2	29.8	0.94	1.00	0.67	1.00	1.00	0.75	0.007669	0.111669	-
Rv2008c	-	27	59.7	52.1	61.9	62.1	50.3	62.0	-0.048	-0.229	0.000	0.003	-0.275	0.003	87.9	74.0	77.8	79.8	67.9	79.8	0.68	0.70	0.80	0.78	0.74	0.78	0.868595	1.000000	-
Rv2009	-	2	163.5	155.0	161.1	180.7	175.6	124.3	0.020	-0.054	0.000	0.161	0.120	-0.362	245.3	155.0	161.1	180.7	175.6	165.7	0.67	1.00	1.00	1.00	1.00	0.75	0.734169	1.000000	-
Rv2010	-	6	193.8	194.3	198.1	174.7	165.4	173.2	-0.031	-0.028	0.000	-0.177	-0.254	-0.189	205.2	233.2	264.2	209.6	198.5	207.8	0.94	0.83	0.75	0.83	0.83	0.83	0.968535	1.000000	-
Rv2011c	-	6	217.6	133.9	178.2	181.0	176.3	152.6	0.281	-0.399	0.000	0.022	-0.015	-0.217	217.6	133.9	178.2	181.0	176.3	152.6	1.00	1.00	1.00	1.00	1.00	1.00	0.714047	1.000000	-
Rv2012	-	10	184.1	178.2	157.5	165.3	176.8	175.7	0.219	0.173	0.000	0.068	0.162	0.154	204.5	198.0	175.0	165.3	176.8	195.3	0.90	0.90	0.90	1.00	1.00	0.90	0.446752	1.000000	-
Rv2013	-	2	127.0	127.5	250.3	244.0	191.7	106.8	-0.952	-0.947	0.000	-0.036	-0.376	-1.192	190.5	127.5	333.8	244.0	191.7	213.5	0.67	1.00	0.75	1.00	1.00	0.50	0.431465	1.000000	-
Rv2014	-	4	246.0	192.5	280.8	279.2	306.7	226.4	-0.187	-0.533	0.000	-0.008	0.125	-0.304	246.0	220.0	280.8	279.2	306.7	226.4	1.00	0.88	1.00	1.00	1.00	1.00	0.921818	1.000000	-
Rv2015c	-	8	92.4	92.1	86.8	88.8	92.7	77.8	0.086	0.081	0.000	0.031	0.091	-0.148	96.4	105.2	86.8	88.8	98.9	88.9	0.96	0.88	1.00	1.00	0.94	0.88	0.485299	1.000000	-
Rv2016	-	7	74.4	76.5	70.1	56.6	67.4	71.8	0.080	0.118	0.000	-0.287	-0.054	0.031	142.1	107.1	140.2	132.0	94.3	91.3	0.52	0.71	0.50	0.43	0.71	0.79	0.746198	1.000000	-
Rv2017	-	12	0.0	0.4	0.0	0.0	0.0	0.0	0.000	0.115	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.04	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2018	-	14	17.5	21.4	18.1	26.6	30.6	25.7	-0.038	0.195	0.000	0.454	0.624	0.414	33.3	28.5	31.6	41.4	38.9	31.3	0.52	0.75	0.57	0.64	0.79	0.82	0.202198	1.000000	-
Rv2019	-	6	126.4	141.7	140.8	128.7	112.3	136.6	-0.150	0.009	0.000	-0.125	-0.313	-0.043	126.4	141.7	153.6	128.7	112.3	136.6	1.00	1.00	0.92	1.00	1.00	1.00	0.885139	1.000000	-
Rv2020c	-	4	202.4	182.0	190.8	223.3	203.5	174.5	0.083	-0.067	0.000	0.221	0.091	-0.125	220.8	242.6	190.8	223.3	203.5	199.5	0.92	0.75	1.00	1.00	1.00	0.88	0.668396	1.000000	-
Rv2021c	-	5	249.2	215.3	231.4	232.0	223.2	207.7	0.104	-0.102	0.000	0.004	-0.051	-0.152	373.8	269.2	257.2	316.4	223.2	346.2	0.67	0.80	0.90	0.73	1.00	0.60	0.413009	1.000000	-
Rv2022c	-	13	242.7	218.6	217.9	244.3	263.2	259.8	0.152	0.004	0.000	0.161	0.267	0.248	262.9	247.1	246.3	272.2	297.6	270.2	0.92	0.88	0.88	0.90	0.88	0.96	0.944271	1.000000	-
Rv2023c	-	2	55.3	58.9	63.9	62.7	68.6	77.3	-0.192	-0.109	0.000	-0.027	0.093	0.255	55.3	58.9	63.9	62.7	68.6	77.3	1.00	1.00	1.00	1.00	1.00	1.00	0.552239	1.000000	-
Rv2024c	-	12	167.0	167.2	144.7	167.7	152.5	169.2	0.201	0.202	0.000	0.207	0.073	0.219	182.2	182.4	157.8	182.9	166.3	176.6	0.92	0.92	0.92	0.92	0.92	0.96	0.998756	1.000000	-
Rv2025c	-	9	134.2	161.0	179.0	141.0	138.8	150.6	-0.403	-0.149	0.000	-0.334	-0.356	-0.242	164.6	170.4	189.6	146.5	138.8	169.4	0.81	0.94	0.94	0.96	1.00	0.89	0.725876	1.000000	-
Rv2026c	-	8	64.5	57.0	70.6	52.8	56.6	44.0	-0.121	-0.286	0.000	-0.387	-0.295	-0.626	91.1	65.2	86.9	63.4	82.4	58.7	0.71	0.88	0.81	0.83	0.69	0.75	0.703072	1.000000	-
Rv2027c	-	14	199.5	220.3	189.5	208.7	207.3	181.6	0.072	0.212	0.000	0.135	0.126	-0.060	220.6	220.3	189.5	213.7	207.3	188.3	0.90	1.00	1.00	0.98	1.00	0.96	0.483842	1.000000	-
Rv2028c	-	11	106.1	77.4	71.9	79.5	75.3	74.0	0.530	0.099	0.000	0.135	0.061	0.037	166.7	131.0	113.1	164.0	92.0	125.2	0.64	0.59	0.64	0.48	0.82	0.59	0.468398	1.000000	-
Rv2029c	pfkB	9	75.8	79.3	112.2	110.2	80.6	101.2	-0.537	-0.475	0.000	-0.024	-0.454	-0.142	85.3	84.0	126.2	129.4	90.7	101.2	0.89	0.94	0.89	0.85	0.89	1.00	0.165100	0.994969	-
Rv2030c	-	32	143.4	126.8	130.5	129.7	131.0	125.2	0.131	-0.041	0.000	-0.009	0.005	-0.058	162.0	147.5	149.2	151.9	155.3	145.7	0.89	0.86	0.88	0.85	0.84	0.86	0.985706	1.000000	-
Rv2031c	hspX	8	103.6	116.2	84.6	104.1	91.3	81.3	0.278	0.436	0.000	0.284	0.105	-0.055	113.1	132.8	104.1	118.9	97.4	86.7	0.92	0.88	0.81	0.88	0.94	0.94	0.979039	1.000000	-
Rv2032	acg	17	89.1	101.0	110.8	116.8	81.3	88.2	-0.301	-0.127	0.000	0.073	-0.424	-0.314	103.2	118.5	130.0	126.8	86.4	96.7	0.86	0.85	0.85	0.92	0.94	0.91	0.741414	1.000000	-
Rv2033c	-	10	227.1	187.2	196.7	187.5	179.3	205.7	0.202	-0.070	0.000	-0.068	-0.130	0.063	262.1	187.2	196.7	208.3	179.3	228.6	0.87	1.00	1.00	0.90	1.00	0.90	0.251670	1.000000	-
Rv2034	-	2	130.6	79.0	156.3	82.1	98.3	69.5	-0.251	-0.941	0.000	-0.889	-0.643	-1.114	130.6	79.0	156.3	82.1	98.3	69.5	1.00	1.00	1.00	1.00	1.00	1.00	0.650977	1.000000	-
Rv2035	-	12	107.4	109.6	86.0	90.4	98.1	102.2	0.305	0.332	0.000	0.068	0.180	0.237	117.1	109.6	93.8	92.9	107.0	102.2	0.92	1.00	0.92	0.97	0.92	1.00	0.605230	1.000000	-
Rv2036	-	7	79.3	82.2	74.9	75.3	79.4	70.6	0.079	0.126	0.000	0.007	0.080	-0.079	92.6	82.2	87.3	98.8	111.2	89.9	0.86	1.00	0.86	0.76	0.71	0.79	0.527768	1.000000	-
Rv2037c	-	15	73.6	69.5	84.6	73.7	58.9	59.9	-0.189	-0.267	0.000	-0.186	-0.488	-0.466	87.2	80.2	110.4	85.1	67.9	69.1	0.84	0.87	0.77	0.87	0.87	0.87	0.841990	1.000000	-
Rv2038c	-	16	50.5	43.0	38.1	32.0	29.7	35.6	0.366	0.157	0.000	-0.220	-0.311	-0.083	75.7	57.3	55.4	45.1	47.5	47.5	0.67	0.75	0.69	0.71	0.62	0.75	0.564137	1.000000	-
Rv2039c	-	14	34.3	36.7	48.8	32.3	36.5	30.7	-0.453	-0.366	0.000	-0.529	-0.373	-0.593	53.4	60.5	80.4	45.2	48.7	37.3	0.64	0.61	0.61	0.71	0.75	0.82	0.141593	0.918629	-
Rv2040c	-	16	21.8	25.2	23.4	19.6	25.3	27.7	-0.088	0.086	0.000	-0.208	0.092	0.201	45.4	36.7	39.5	34.9	36.8	42.2	0.48	0.69	0.59	0.56	0.69	0.66	0.849551	1.000000	-
Rv2041c	-	21	54.6	54.4	46.1	52.4	45.8	55.0	0.223	0.218	0.000	0.168	-0.009	0.231	68.8	69.3	66.8	62.3	49.3	64.1	0.79	0.79	0.69	0.84	0.93	0.86	0.363966	1.000000	-
Rv2042c	-	14	99.2	75.9	80.2	64.5	76.8	108.6	0.291	-0.074	0.000	-0.292	-0.058	0.415	104.2	96.6	97.6	84.7	102.4	138.2	0.95	0.79	0.82	0.76	0.75	0.79	0.062876	0.553806	-
Rv2043c	pncA	11	136.9	105.3	112.7	107.9	106.5	92.4	0.270	-0.093	0.000	-0.060	-0.078	-0.274	161.4	115.9	130.5	122.8	117.2	96.8	0.85	0.91	0.86	0.88	0.91	0.95	0.943871	1.000000	-
Rv2044c	-	7	72.9	106.9	103.6	68.1	75.6	82.2	-0.480	0.043	0.000	-0.571	-0.430	-0.317	72.9	106.9	111.6	68.1	75.6	82.2	1.00	1.00	0.93	1.00	1.00	1.00	0.193854	1.000000	-
Rv2045c	lipT	27	131.2	97.7	137.3	123.4	116.7	100.7	-0.064	-0.471	0.000	-0.148	-0.225	-0.429	138.0	109.9	145.4	131.5	123.6	111.0	0.95	0.89	0.94	0.94	0.94	0.91	0.807700	1.000000	-
Rv2046	lppI	10	313.7	262.6	271.9	216.3	208.3	286.2	0.203	-0.049	0.000	-0.323	-0.377	0.072	313.7	262.6	271.9	216.3	208.3	286.2	1.00	1.00	1.00	1.00	1.00	1.00	0.403634	1.000000	-
Rv2047c	-	30	0.3	0.5	27.3	92.0	85.8	1.0	-2.622	-2.553	0.000	1.586	1.490	-2.427	22.6	10.1	38.1	107.5	100.9	10.1	0.01	0.05	0.72	0.86	0.85	0.10	0.000000	0.000000	-
Rv2048c	pks12	130	3.1	12.9	17.8	51.8	50.7	6.5	-1.493	-0.356	0.000	1.314	1.284	-0.991	23.4	28.3	40.0	74.0	73.6	19.9	0.13	0.45	0.45	0.70	0.69	0.33	0.000000	0.000000	-
Rv2049c	-	1	382.3	77.0	115.8	284.2	111.9	394.2	1.680	-0.559	0.000	1.259	-0.048	1.724	382.3	77.0	115.8	284.2	111.9	394.2	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2050	-	5	0.8	2.0	2.5	0.0	4.7	2.2	-0.381	-0.095	0.000	-0.589	0.366	-0.069	11.6	10.2	25.2	0.0	23.5	21.7	0.07	0.20	0.10	0.00	0.20	0.10	0.737849	1.000000	-
Rv2051c	ppm1	32	99.6	95.0	106.5	73.2	117.1	84.3	-0.092	-0.157	0.000	-0.511	0.131	-0.320	227.6	202.6	206.5	159.7	220.4	158.7	0.44	0.47	0.52	0.46	0.53	0.53	0.733698	1.000000	-
Rv2052c	-	19	258.1	237.8	237.8	258.0	211.3	203.3	0.116	-0.000	0.000	0.115	-0.167	-0.221	267.4	265.7	237.8	272.3	223.0	214.6	0.96	0.89	1.00	0.95	0.95	0.95	0.528367	1.000000	-
Rv2053c	fxsA	3	102.0	95.0	87.8	76.2	85.7	173.6	0.206	0.109	0.000	-0.192	-0.032	0.945	153.0	114.0	131.6	114.3	128.6	208.3	0.67	0.83	0.67	0.67	0.67	0.83	0.934538	1.000000	-
Rv2054	-	15	163.0	152.8	186.7	173.0	192.3	187.8	-0.191	-0.281	0.000	-0.108	0.041	0.008	178.9	163.7	200.1	185.3	198.9	201.3	0.91	0.93	0.93	0.93	0.97	0.93	0.980848	1.000000	-
Rv2055c	rpsR	3	67.8	42.6	73.0	82.4	84.6	67.8	-0.100	-0.713	0.000	0.163	0.198	-0.101	76.3	51.1	73.0	92.7	84.6	81.3	0.89	0.83	1.00	0.89	1.00	0.83	0.831624	1.000000	-
Rv2056c	rpsN	3	103.8	93.2	117.7	99.7	97.8	121.1	-0.174	-0.322	0.000	-0.230	-0.257	0.039	103.8	93.2	141.3	112.1	97.8	121.1	1.00	1.00	0.83	0.89	1.00	1.00	0.847593	1.000000	-
Rv2057c	rpmG	4	342.0	340.3	344.2	365.2	327.8	307.7	-0.009	-0.016	0.000	0.084	-0.069	-0.159	342.0	340.3	344.2	365.2	327.8	307.7	1.00	1.00	1.00	1.00	1.00	1.00	0.998314	1.000000	-
Rv2058c	rpmB	5	159.1	159.1	132.1	126.6	143.4	142.7	0.258	0.259	0.000	-0.060	0.113	0.107	159.1	159.1	132.1	126.6	143.4	142.7	1.00	1.00	1.00	1.00	1.00	1.00	0.964977	1.000000	-
Rv2059	-	17	107.0	112.2	103.2	99.6	107.9	120.9	0.051	0.115	0.000	-0.048	0.061	0.219	121.3	115.6	113.1	108.1	107.9	128.5	0.88	0.97	0.91	0.92	1.00	0.94	0.663638	1.000000	-
Rv2060	-	3	123.3	99.9	108.2	102.0	147.7	133.1	0.181	-0.109	0.000	-0.081	0.432	0.286	123.3	99.9	108.2	102.0	147.7	133.1	1.00	1.00	1.00	1.00	1.00	1.00	0.836592	1.000000	-
Rv2061c	-	5	150.7	195.6	165.1	161.2	148.5	176.2	-0.127	0.238	0.000	-0.033	-0.148	0.091	150.7	195.6	165.1	161.2	148.5	176.2	1.00	1.00	1.00	1.00	1.00	1.00	0.946026	1.000000	-
Rv2062c	cobN	46	130.9	106.2	132.3	115.9	109.7	117.6	-0.014	-0.304	0.000	-0.184	-0.259	-0.163	155.8	139.6	160.2	137.8	131.1	140.6	0.84	0.76	0.83	0.84	0.84	0.84	0.822418	1.000000	-
Rv2063	-	2	25.2	25.3	15.8	16.3	54.6	52.3	0.540	0.543	0.000	0.034	1.520	1.463	30.2	25.3	63.1	32.5	54.6	52.3	0.83	1.00	0.25	0.50	1.00	1.00	0.007576	0.110723	-
Rv2064	cobG	8	41.6	35.6	41.3	41.4	43.1	29.7	0.010	-0.191	0.000	0.004	0.054	-0.417	90.8	63.2	66.1	76.5	68.9	118.7	0.46	0.56	0.62	0.54	0.62	0.25	0.406018	1.000000	-
Rv2065	cobH	5	116.9	141.3	126.7	166.5	159.4	112.9	-0.112	0.151	0.000	0.380	0.319	-0.161	146.1	201.8	181.1	249.7	159.4	125.4	0.80	0.70	0.70	0.67	1.00	0.90	0.359410	1.000000	-
Rv2066	cobI	20	302.4	282.5	279.5	288.3	248.9	264.5	0.112	0.015	0.000	0.044	-0.164	-0.078	329.9	289.7	302.1	303.4	269.1	293.9	0.92	0.97	0.93	0.95	0.93	0.90	0.979318	1.000000	-
Rv2067c	-	31	80.4	92.7	84.9	86.1	71.2	85.9	-0.073	0.121	0.000	0.020	-0.237	0.017	131.2	127.8	128.3	114.4	100.4	118.4	0.61	0.73	0.66	0.75	0.71	0.73	0.938727	1.000000	-
Rv2068c	blaC	13	225.4	217.6	237.5	246.0	212.1	214.4	-0.074	-0.123	0.000	0.050	-0.160	-0.144	258.5	217.6	294.0	259.3	212.1	214.4	0.87	1.00	0.81	0.95	1.00	1.00	0.270426	1.000000	-
Rv2069	sigC	8	206.4	187.2	170.6	181.8	206.4	177.0	0.268	0.130	0.000	0.090	0.268	0.052	225.1	213.9	195.0	198.4	206.4	202.3	0.92	0.88	0.88	0.92	1.00	0.88	0.940439	1.000000	-
Rv2070c	cobK	15	113.3	110.1	116.5	120.3	109.6	118.4	-0.039	-0.079	0.000	0.045	-0.085	0.022	164.4	157.2	174.7	169.2	173.0	154.4	0.69	0.70	0.67	0.71	0.63	0.77	0.997551	1.000000	-
Rv2071c	cobM	12	114.7	158.9	154.6	155.0	126.9	124.0	-0.415	0.038	0.000	0.004	-0.276	-0.307	147.5	173.3	168.7	169.1	160.3	148.8	0.78	0.92	0.92	0.92	0.79	0.83	0.750044	1.000000	-
Rv2072c	cobL	13	105.0	98.2	128.5	130.8	111.8	93.2	-0.279	-0.371	0.000	0.026	-0.192	-0.442	120.4	111.0	159.0	159.5	121.2	115.4	0.87	0.88	0.81	0.82	0.92	0.81	0.646316	1.000000	-
Rv2073c	-	8	193.3	167.7	178.8	168.9	202.5	134.6	0.110	-0.090	0.000	-0.079	0.175	-0.396	201.7	167.7	190.7	193.1	202.5	134.6	0.96	1.00	0.94	0.88	1.00	1.00	0.581295	1.000000	-
Rv2074	-	5	204.8	188.7	192.6	182.5	164.2	161.5	0.087	-0.029	0.000	-0.076	-0.223	-0.247	204.8	209.7	192.6	182.5	164.2	179.4	1.00	0.90	1.00	1.00	1.00	0.90	0.832085	1.000000	-
Rv2075c	-	23	288.7	261.9	291.9	255.0	243.1	270.2	-0.016	-0.154	0.000	-0.191	-0.259	-0.109	306.4	301.2	305.1	270.7	260.1	282.5	0.94	0.87	0.96	0.94	0.93	0.96	0.912779	1.000000	-
Rv2076c	-	5	47.2	48.8	51.3	52.3	58.8	54.0	-0.107	-0.064	0.000	0.025	0.182	0.069	78.7	69.7	73.3	65.3	65.4	60.0	0.60	0.70	0.70	0.80	0.90	0.90	0.928202	1.000000	-
Rv2077c	-	17	278.5	233.0	279.0	238.2	226.8	254.6	-0.003	-0.255	0.000	-0.224	-0.293	-0.130	315.6	264.1	296.5	248.0	241.0	262.3	0.88	0.88	0.94	0.96	0.94	0.97	0.851949	1.000000	-
Rv2077A	-	7	91.9	65.0	94.5	73.9	98.4	116.8	-0.038	-0.508	0.000	-0.335	0.056	0.292	113.5	91.0	120.2	86.2	114.8	148.6	0.81	0.71	0.79	0.86	0.86	0.79	0.754474	1.000000	-
Rv2078	-	3	99.3	67.8	81.2	62.5	80.9	83.1	0.274	-0.245	0.000	-0.354	-0.006	0.031	99.3	67.8	81.2	62.5	80.9	83.1	1.00	1.00	1.00	1.00	1.00	1.00	0.837986	1.000000	-
Rv2079	-	31	120.8	97.2	108.8	109.2	102.2	100.4	0.145	-0.155	0.000	0.005	-0.086	-0.110	178.3	162.8	164.5	145.1	144.0	129.7	0.68	0.60	0.66	0.75	0.71	0.77	0.722041	1.000000	-
Rv2080	lppJ	10	21.4	35.3	31.3	25.5	25.7	32.7	-0.460	0.150	0.000	-0.252	-0.241	0.056	40.1	50.4	44.7	42.5	39.6	46.8	0.53	0.70	0.70	0.60	0.65	0.70	0.970439	1.000000	-
Rv2081c	-	7	204.5	171.9	203.8	180.5	169.5	183.7	0.005	-0.239	0.000	-0.170	-0.259	-0.146	306.7	218.8	356.6	291.6	237.3	285.7	0.67	0.79	0.57	0.62	0.71	0.64	0.988322	1.000000	-
Rv2082	-	34	97.7	89.9	89.7	86.2	89.2	87.7	0.117	0.004	0.000	-0.054	-0.007	-0.030	136.5	117.6	138.6	129.3	126.4	106.5	0.72	0.76	0.65	0.67	0.71	0.82	0.745807	1.000000	-
Rv2083	-	4	128.7	123.3	129.7	143.0	152.5	136.1	-0.011	-0.070	0.000	0.135	0.225	0.066	128.7	141.0	129.7	143.0	152.5	155.5	1.00	0.88	1.00	1.00	1.00	0.88	0.719401	1.000000	-
Rv2084	-	25	192.5	191.2	192.1	210.5	213.4	193.6	0.003	-0.006	0.000	0.129	0.148	0.011	203.3	203.4	208.8	222.4	222.3	206.0	0.95	0.94	0.92	0.95	0.96	0.94	0.992434	1.000000	-
Rv2085	-	3	94.8	82.9	65.6	94.2	58.6	102.2	0.501	0.317	0.000	0.492	-0.150	0.603	106.7	124.3	78.7	106.0	58.6	102.2	0.89	0.67	0.83	0.89	1.00	1.00	0.244158	1.000000	-
Rv2086	-	10	122.3	107.0	163.4	100.8	111.3	169.6	-0.404	-0.588	0.000	-0.671	-0.534	0.052	122.3	107.0	172.0	100.8	117.2	169.6	1.00	1.00	0.95	1.00	0.95	1.00	0.129293	0.862675	-
Rv2087	-	4	9.0	13.9	1.6	7.2	12.2	8.9	1.091	1.526	0.000	0.886	1.385	1.084	21.6	22.3	12.6	14.3	24.4	23.8	0.42	0.62	0.12	0.50	0.50	0.38	0.427019	1.000000	-
Rv2088	pknJ	23	47.8	60.9	58.0	53.8	55.0	49.3	-0.253	0.066	0.000	-0.098	-0.069	-0.213	61.1	80.1	78.4	88.4	63.3	59.7	0.78	0.76	0.74	0.61	0.87	0.83	0.042178	0.422835	-
Rv2089c	pepE	19	47.2	45.0	49.0	37.1	47.6	44.6	-0.049	-0.113	0.000	-0.361	-0.041	-0.123	69.0	53.4	64.3	60.4	58.3	58.5	0.68	0.84	0.76	0.61	0.82	0.76	0.559553	1.000000	-
Rv2090	-	15	126.3	121.9	128.9	103.6	115.4	129.5	-0.028	-0.077	0.000	-0.302	-0.153	0.007	145.7	130.6	138.1	103.6	128.2	129.5	0.87	0.93	0.93	1.00	0.90	1.00	0.092922	0.710267	-
Rv2091c	-	18	81.1	78.6	80.5	97.1	95.8	89.2	0.010	-0.031	0.000	0.257	0.237	0.140	82.6	80.9	80.5	97.1	98.5	89.2	0.98	0.97	1.00	1.00	0.97	1.00	0.283798	1.000000	-
Rv2092c	helY	36	224.4	205.1	215.0	209.7	220.8	209.8	0.060	-0.067	0.000	-0.035	0.038	-0.035	235.3	214.0	231.0	219.9	230.4	215.8	0.95	0.96	0.93	0.95	0.96	0.97	0.999086	1.000000	-
Rv2093c	tatC	11	3.8	4.6	4.3	1.3	0.4	0.9	-0.070	0.049	0.000	-0.548	-0.778	-0.648	15.8	12.6	18.8	22.1	9.0	10.1	0.24	0.36	0.23	0.06	0.05	0.09	0.005476	0.086025	-
Rv2094c	tatA	2	1.9	2.5	3.1	0.0	0.0	2.4	-0.233	-0.120	0.000	-0.705	-0.705	-0.149	11.6	10.0	12.6	0.0	0.0	9.4	0.17	0.25	0.25	0.00	0.00	0.25	0.804157	1.000000	-
Rv2095c	-	14	243.2	251.9	242.0	239.0	225.1	232.1	0.007	0.056	0.000	-0.017	-0.103	-0.059	261.9	261.2	271.0	239.0	242.4	232.1	0.93	0.96	0.89	1.00	0.93	1.00	0.548485	1.000000	-
Rv2096c	-	13	121.7	136.1	126.6	154.4	138.2	153.3	-0.054	0.101	0.000	0.277	0.122	0.267	148.4	147.5	164.6	172.1	149.7	166.1	0.82	0.92	0.77	0.90	0.92	0.92	0.903478	1.000000	-
Rv2097c	-	20	42.6	76.8	45.1	61.5	67.9	59.0	-0.074	0.708	0.000	0.409	0.543	0.353	60.8	85.3	66.8	72.3	75.5	65.5	0.70	0.90	0.68	0.85	0.90	0.90	0.101912	0.747565	-
Rv2100	-	18	269.0	280.0	301.8	269.3	257.5	259.7	-0.163	-0.106	0.000	-0.162	-0.225	-0.213	269.0	305.5	301.8	309.4	272.7	275.0	1.00	0.92	1.00	0.87	0.94	0.94	0.092268	0.708520	-
Rv2101	helZ	27	232.9	221.4	216.4	221.0	224.2	213.4	0.104	0.032	0.000	0.029	0.050	-0.020	290.3	244.0	265.6	259.4	257.6	221.6	0.80	0.91	0.81	0.85	0.87	0.96	0.579194	1.000000	-
Rv2102	-	11	171.8	165.8	169.4	151.1	170.6	164.8	0.020	-0.030	0.000	-0.160	0.010	-0.039	210.0	182.3	196.1	166.2	187.7	181.2	0.82	0.91	0.86	0.91	0.91	0.91	0.996767	1.000000	-
Rv2103c	-	5	448.9	327.8	325.9	287.8	279.8	255.3	0.456	0.008	0.000	-0.176	-0.216	-0.346	561.1	409.7	407.3	359.7	279.8	319.2	0.80	0.80	0.80	0.80	1.00	0.80	0.676686	1.000000	-
Rv2104c	-	1	97.4	82.5	84.3	106.9	110.9	115.5	0.198	-0.029	0.000	0.325	0.376	0.432	97.4	82.5	84.3	106.9	110.9	115.5	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2105	-	4	196.2	237.2	210.0	237.3	235.3	182.9	-0.096	0.172	0.000	0.172	0.160	-0.194	214.0	237.2	210.0	237.3	235.3	182.9	0.92	1.00	1.00	1.00	1.00	1.00	0.923405	1.000000	-
Rv2106	-	21	287.2	295.3	331.3	310.8	277.6	296.5	-0.203	-0.163	0.000	-0.091	-0.251	-0.158	354.8	354.3	434.8	376.5	353.3	327.7	0.81	0.83	0.76	0.83	0.79	0.90	0.941349	1.000000	-
Rv2107	PE22	9	15.4	21.6	17.8	22.2	26.8	37.5	-0.157	0.223	0.000	0.256	0.480	0.900	29.8	29.9	32.0	27.3	30.1	42.2	0.52	0.72	0.56	0.81	0.89	0.89	0.028503	0.312440	-
Rv2108	PPE36	19	130.6	125.9	125.0	121.2	102.7	118.6	0.062	0.011	0.000	-0.043	-0.271	-0.072	155.1	140.7	158.3	138.1	108.4	118.6	0.84	0.89	0.79	0.88	0.95	1.00	0.151692	0.948666	-
Rv2109c	prcA	17	18.3	33.4	11.9	15.6	22.4	19.4	0.462	1.185	0.000	0.282	0.694	0.528	34.5	39.2	27.0	27.4	30.4	22.7	0.53	0.85	0.44	0.57	0.74	0.85	0.000551	0.011822	-
Rv2110c	prcB	16	6.6	17.8	8.2	5.9	14.2	12.7	-0.193	0.787	0.000	-0.277	0.537	0.422	28.6	27.1	29.2	18.9	19.7	20.3	0.23	0.66	0.28	0.31	0.72	0.62	0.000083	0.002172	-
Rv2111c	-	1	0.0	35.8	0.0	9.7	20.8	19.5	0.000	3.029	0.000	1.559	2.365	2.293	0.0	35.8	0.0	14.6	20.8	19.5	0.00	1.00	0.00	0.67	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2112c	-	29	41.0	69.6	50.1	53.3	66.3	60.3	-0.261	0.437	0.000	0.082	0.371	0.246	57.5	79.2	66.1	64.5	68.6	61.4	0.71	0.88	0.76	0.83	0.97	0.98	0.000089	0.002318	-
Rv2113	-	10	140.1	153.4	166.6	151.8	188.1	135.9	-0.242	-0.116	0.000	-0.131	0.170	-0.285	161.6	161.5	196.0	168.6	188.1	143.0	0.87	0.95	0.85	0.90	1.00	0.95	0.763482	1.000000	-
Rv2114	-	12	170.7	159.6	174.4	144.2	160.1	175.7	-0.030	-0.124	0.000	-0.266	-0.120	0.010	170.7	159.6	174.4	144.2	160.1	175.7	1.00	1.00	1.00	1.00	1.00	1.00	0.912841	1.000000	-
Rv2115c	-	23	32.3	49.1	27.4	51.9	52.3	46.7	0.207	0.741	0.000	0.814	0.824	0.677	42.9	52.5	37.0	55.1	55.9	48.9	0.75	0.93	0.74	0.94	0.93	0.96	0.000142	0.003543	-
Rv2116	lppK	5	106.3	117.8	89.7	136.9	142.8	107.7	0.234	0.375	0.000	0.583	0.643	0.251	122.7	117.8	112.1	136.9	158.7	119.6	0.87	1.00	0.80	1.00	0.90	0.90	0.756404	1.000000	-
Rv2117	-	2	121.8	61.1	134.5	123.6	125.4	135.7	-0.137	-1.078	0.000	-0.118	-0.097	0.013	121.8	81.4	134.5	123.6	125.4	135.7	1.00	0.75	1.00	1.00	1.00	1.00	0.541247	1.000000	-
Rv2118c	-	12	181.7	186.7	202.1	179.7	185.6	192.0	-0.150	-0.112	0.000	-0.166	-0.120	-0.073	186.9	194.8	210.9	179.7	185.6	192.0	0.97	0.96	0.96	1.00	1.00	1.00	0.896179	1.000000	-
Rv2119	-	18	182.1	188.2	173.7	183.4	169.8	164.6	0.066	0.113	0.000	0.076	-0.032	-0.076	204.9	199.3	195.4	206.4	179.8	174.2	0.89	0.94	0.89	0.89	0.94	0.94	0.992421	1.000000	-
Rv2120c	-	7	201.8	218.9	191.1	241.1	183.2	167.8	0.077	0.192	0.000	0.328	-0.059	-0.182	302.6	306.5	222.9	421.9	256.4	180.7	0.67	0.71	0.86	0.57	0.71	0.93	0.370904	1.000000	-
Rv2121c	hisG	9	0.4	0.0	0.0	0.5	0.8	0.0	0.119	0.000	0.000	0.150	0.216	0.000	11.6	0.0	0.0	14.8	14.5	0.0	0.04	0.00	0.00	0.04	0.06	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2122c	hisE	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2123	PPE37	21	133.6	142.3	154.1	3.1	3.9	148.6	-0.199	-0.111	0.000	-4.287	-4.158	-0.051	171.7	181.0	190.3	18.0	18.3	164.2	0.78	0.79	0.81	0.17	0.21	0.90	0.000000	0.000000	-
Rv2124c	metH	38	108.6	120.5	114.1	123.2	110.1	125.7	-0.068	0.075	0.000	0.106	-0.049	0.134	122.6	127.1	127.6	128.9	116.2	127.4	0.89	0.95	0.89	0.96	0.95	0.99	0.426391	1.000000	-
Rv2125	-	9	170.4	153.2	159.4	157.8	168.6	152.5	0.094	-0.055	0.000	-0.014	0.079	-0.062	177.0	162.3	168.8	157.8	178.5	152.5	0.96	0.94	0.94	1.00	0.94	1.00	0.993905	1.000000	-
Rv2126c	PE_PGRS37	5	367.6	347.2	407.0	272.2	289.4	256.1	-0.145	-0.226	0.000	-0.572	-0.485	-0.658	367.6	385.8	407.0	291.6	361.8	256.1	1.00	0.90	1.00	0.93	0.80	1.00	0.572569	1.000000	-
Rv2127	ansP1	24	133.6	112.0	125.5	73.2	79.2	103.5	0.088	-0.157	0.000	-0.739	-0.632	-0.266	157.7	122.2	162.8	83.6	90.5	112.9	0.85	0.92	0.77	0.88	0.88	0.92	0.066223	0.576920	-
Rv2128	-	6	33.2	31.3	23.4	24.5	21.5	37.0	0.427	0.353	0.000	0.051	-0.100	0.564	42.7	31.3	28.1	29.3	23.5	37.0	0.78	1.00	0.83	0.83	0.92	1.00	0.223027	1.000000	-
Rv2129c	-	11	254.4	247.7	277.9	228.3	196.3	183.9	-0.125	-0.163	0.000	-0.278	-0.491	-0.583	270.8	247.7	277.9	251.1	196.3	183.9	0.94	1.00	1.00	0.91	1.00	1.00	0.409208	1.000000	-
Rv2130c	cysS	22	30.0	26.3	34.5	11.2	26.9	19.2	-0.175	-0.336	0.000	-1.289	-0.305	-0.705	44.9	39.9	48.9	23.0	35.9	27.3	0.67	0.66	0.70	0.48	0.75	0.70	0.000053	0.001434	-
Rv2131c	cysQ	9	108.1	160.2	71.5	169.0	163.9	127.5	0.565	1.111	0.000	1.186	1.143	0.792	132.7	169.6	107.2	190.1	163.9	127.5	0.81	0.94	0.67	0.89	1.00	1.00	0.035968	0.374706	-
Rv2132	-	2	148.4	144.3	199.5	117.8	197.3	187.8	-0.416	-0.454	0.000	-0.736	-0.016	-0.085	148.4	144.3	199.5	117.8	197.3	187.8	1.00	1.00	1.00	1.00	1.00	1.00	0.368661	1.000000	-
Rv2133c	-	9	206.7	196.4	204.5	138.0	138.7	197.8	0.015	-0.057	0.000	-0.551	-0.545	-0.047	206.7	196.4	204.5	138.0	146.8	197.8	1.00	1.00	1.00	1.00	0.94	1.00	0.564920	1.000000	-
Rv2134c	-	7	128.9	156.9	142.5	125.9	125.8	179.7	-0.139	0.135	0.000	-0.172	-0.173	0.325	142.5	169.0	166.2	146.9	135.5	193.6	0.90	0.93	0.86	0.86	0.93	0.93	0.979467	1.000000	-
Rv2135c	-	4	100.4	88.0	72.5	98.3	160.6	121.8	0.443	0.262	0.000	0.414	1.095	0.709	100.4	88.0	72.5	98.3	160.6	121.8	1.00	1.00	1.00	1.00	1.00	1.00	0.055254	0.504496	-
Rv2136c	uppP	12	117.4	130.9	120.6	112.8	132.6	141.9	-0.037	0.113	0.000	-0.093	0.132	0.226	162.6	165.3	180.9	162.4	167.5	212.8	0.72	0.79	0.67	0.69	0.79	0.67	0.972655	1.000000	-
Rv2137c	-	6	131.3	102.8	121.4	132.1	104.7	112.1	0.109	-0.229	0.000	0.117	-0.205	-0.110	131.3	123.4	132.4	139.9	125.6	112.1	1.00	0.83	0.92	0.94	0.83	1.00	0.633222	1.000000	-
Rv2138	lppL	18	26.6	40.0	25.6	30.8	43.3	34.5	0.043	0.555	0.000	0.223	0.656	0.367	47.8	57.6	51.3	50.3	55.6	42.8	0.56	0.69	0.50	0.61	0.78	0.81	0.329223	1.000000	-
Rv2139	pyrD	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2140c	TB18.6	9	160.5	193.4	150.5	188.7	146.7	202.3	0.090	0.352	0.000	0.317	-0.035	0.415	180.5	193.4	193.5	212.3	165.1	202.3	0.89	1.00	0.78	0.89	0.89	1.00	0.563422	1.000000	-
Rv2141c	-	18	154.9	126.4	141.8	143.4	129.2	134.1	0.123	-0.160	0.000	0.015	-0.130	-0.078	178.0	142.2	154.7	161.3	150.0	146.3	0.87	0.89	0.92	0.89	0.86	0.92	0.997335	1.000000	-
Rv2142c	-	13	276.6	205.1	241.1	237.7	219.9	249.7	0.194	-0.229	0.000	-0.020	-0.130	0.049	337.1	222.2	272.6	257.6	228.7	270.5	0.82	0.92	0.88	0.92	0.96	0.92	0.889434	1.000000	-
Rv2143	-	13	275.1	256.5	281.4	264.9	256.6	258.7	-0.032	-0.131	0.000	-0.086	-0.131	-0.119	298.1	277.9	304.8	286.9	278.0	269.0	0.92	0.92	0.92	0.92	0.92	0.96	0.999995	1.000000	-
Rv2144c	-	4	101.0	141.3	121.2	122.8	179.1	136.1	-0.252	0.214	0.000	0.019	0.545	0.162	110.1	161.5	121.2	163.8	204.6	136.1	0.92	0.88	1.00	0.75	0.88	1.00	0.304638	1.000000	-
Rv2145c	wag31	10	0.0	1.0	1.5	0.0	0.5	1.6	-0.390	-0.128	0.000	-0.390	-0.265	0.001	0.0	19.9	31.0	0.0	9.0	15.6	0.00	0.05	0.05	0.00	0.05	0.10	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2146c	-	1	255.8	378.5	275.2	264.9	296.0	304.0	-0.104	0.453	0.000	-0.054	0.103	0.141	255.8	378.5	275.2	264.9	296.0	304.0	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2147c	-	15	2.1	2.0	3.1	0.6	3.5	2.0	-0.194	-0.212	0.000	-0.545	0.062	-0.212	31.7	30.4	47.0	25.9	35.0	30.4	0.07	0.07	0.07	0.02	0.10	0.07	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2148c	-	5	207.2	181.0	184.1	171.9	180.0	167.3	0.166	-0.024	0.000	-0.096	-0.031	-0.134	207.2	181.0	184.1	171.9	180.0	167.3	1.00	1.00	1.00	1.00	1.00	1.00	0.996463	1.000000	-
Rv2149c	yfiH	5	198.1	170.7	226.4	209.9	221.2	220.5	-0.188	-0.397	0.000	-0.107	-0.033	-0.037	247.7	213.4	226.4	262.4	276.6	275.7	0.80	0.80	1.00	0.80	0.80	0.80	0.525086	1.000000	-
Rv2150c	ftsZ	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2151c	ftsQ	6	34.7	52.7	66.3	40.7	42.4	50.3	-0.845	-0.306	0.000	-0.641	-0.589	-0.367	125.0	158.1	199.0	122.2	127.3	150.9	0.28	0.33	0.33	0.33	0.33	0.33	0.992505	1.000000	-
Rv2152c	murC	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2153c	murG	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2154c	ftsW	15	60.2	44.1	50.3	50.2	49.4	48.6	0.235	-0.173	0.000	-0.003	-0.025	-0.045	902.3	661.5	755.2	564.9	494.0	729.6	0.07	0.07	0.07	0.09	0.10	0.07	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2155c	murD	18	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2156c	mraY	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2157c	murF	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2158c	murE	10	1.5	0.5	0.0	0.0	0.0	0.0	0.380	0.143	0.000	0.000	0.000	0.000	22.6	10.4	0.0	0.0	0.0	0.0	0.07	0.05	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2159c	-	5	209.0	234.7	212.8	197.1	177.8	198.4	-0.026	0.138	0.000	-0.108	-0.253	-0.099	209.0	234.7	212.8	197.1	177.8	198.4	1.00	1.00	1.00	1.00	1.00	1.00	0.880597	1.000000	-
Rv2160A	-	4	111.0	119.8	132.0	98.1	150.2	137.1	-0.240	-0.135	0.000	-0.411	0.180	0.052	166.5	159.7	176.0	147.1	150.2	137.1	0.67	0.75	0.75	0.67	1.00	1.00	0.553711	1.000000	-
Rv2160c	-	2	100.0	117.3	137.3	83.6	123.6	151.6	-0.438	-0.219	0.000	-0.683	-0.146	0.138	200.1	234.5	274.6	167.2	123.6	151.6	0.50	0.50	0.50	0.50	1.00	1.00	0.298686	1.000000	-
Rv2161c	-	8	300.3	270.4	281.4	221.8	212.6	268.7	0.093	-0.057	0.000	-0.337	-0.396	-0.065	300.3	270.4	281.4	221.8	212.6	268.7	1.00	1.00	1.00	1.00	1.00	1.00	0.495620	1.000000	-
Rv2162c	PE_PGRS38	13	218.1	188.1	202.0	203.8	193.5	176.4	0.108	-0.100	0.000	0.012	-0.061	-0.190	229.8	203.8	228.3	220.7	209.6	191.1	0.95	0.92	0.88	0.92	0.92	0.92	0.999274	1.000000	-
Rv2163c	pbpB	29	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2164c	-	10	6.8	7.7	3.4	9.3	8.8	6.8	0.477	0.584	0.000	0.764	0.713	0.483	67.5	38.3	34.4	56.1	35.4	34.0	0.10	0.20	0.10	0.17	0.25	0.20	0.824134	1.000000	-
Rv2165c	mraW	18	23.4	34.5	32.7	30.7	35.5	22.2	-0.409	0.068	0.000	-0.075	0.104	-0.471	45.1	51.7	51.1	55.3	53.2	36.3	0.52	0.67	0.64	0.56	0.67	0.61	0.596704	1.000000	-
Rv2166c	-	7	6.7	19.6	15.1	13.5	14.3	16.0	-0.779	0.289	0.000	-0.123	-0.062	0.061	23.6	27.5	35.3	40.5	50.1	37.4	0.29	0.71	0.43	0.33	0.29	0.43	0.216075	1.000000	-
Rv2167c	-	24	266.9	276.4	303.7	280.6	280.4	285.6	-0.183	-0.134	0.000	-0.112	-0.114	-0.087	325.7	331.7	373.8	342.4	336.4	318.8	0.82	0.83	0.81	0.82	0.83	0.90	0.996538	1.000000	-
Rv2168c	-	4	193.6	230.7	214.3	261.8	213.0	147.2	-0.144	0.104	0.000	0.283	-0.009	-0.527	193.6	230.7	214.3	261.8	213.0	147.2	1.00	1.00	1.00	1.00	1.00	1.00	0.577732	1.000000	-
Rv2169c	-	5	7.5	25.2	12.5	41.4	64.4	23.4	-0.488	0.789	0.000	1.406	1.988	0.697	22.4	28.0	20.8	51.7	64.4	29.2	0.33	0.90	0.60	0.80	1.00	0.80	0.000295	0.006815	-
Rv2170	-	12	184.2	168.7	181.7	135.3	135.4	136.7	0.019	-0.105	0.000	-0.413	-0.412	-0.398	189.5	184.0	189.6	139.1	141.3	136.7	0.97	0.92	0.96	0.97	0.96	1.00	0.769210	1.000000	-
Rv2171	lppM	8	97.6	93.5	101.1	93.7	91.0	84.2	-0.049	-0.108	0.000	-0.105	-0.144	-0.250	156.2	149.5	134.8	132.3	132.4	96.3	0.62	0.62	0.75	0.71	0.69	0.88	0.865919	1.000000	-
Rv2172c	-	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2173	idsA2	17	47.1	26.8	41.9	40.4	41.4	32.1	0.153	-0.561	0.000	-0.046	-0.014	-0.338	63.3	41.4	57.0	54.2	56.3	39.0	0.75	0.65	0.74	0.75	0.74	0.82	0.536929	1.000000	-
Rv2174	-	22	1.1	0.0	0.3	0.0	0.0	0.2	0.211	-0.080	0.000	-0.080	-0.080	-0.011	24.6	0.0	12.6	0.0	0.0	10.8	0.05	0.00	0.02	0.00	0.00	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2175c	-	5	67.0	126.3	119.4	123.0	109.8	107.9	-0.788	0.078	0.000	0.041	-0.116	-0.140	77.4	126.3	132.7	123.0	109.8	107.9	0.87	1.00	0.90	1.00	1.00	1.00	0.430407	1.000000	-
Rv2176	pknL	21	97.2	80.0	78.2	88.1	91.1	96.9	0.297	0.031	0.000	0.163	0.207	0.292	107.4	90.8	96.6	97.4	106.3	119.7	0.90	0.88	0.81	0.90	0.86	0.81	0.628391	1.000000	-
Rv2177c	-	6	215.6	172.8	224.2	238.5	192.8	209.5	-0.055	-0.367	0.000	0.087	-0.213	-0.096	215.6	188.5	244.6	252.5	192.8	209.5	1.00	0.92	0.92	0.94	1.00	1.00	0.913508	1.000000	-
Rv2178c	aroG	15	0.0	0.3	0.0	0.3	0.0	0.0	0.000	0.093	0.000	0.092	0.000	0.000	0.0	10.0	0.0	14.8	0.0	0.0	0.00	0.03	0.00	0.02	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2179c	-	5	8.8	19.3	34.4	81.3	76.0	11.3	-1.513	-0.698	0.000	1.131	1.039	-1.270	33.1	21.4	38.2	81.3	76.0	16.2	0.27	0.90	0.90	1.00	1.00	0.70	0.000000	0.000000	-
Rv2180c	-	11	226.5	186.7	199.3	226.0	198.9	187.6	0.180	-0.092	0.000	0.177	-0.003	-0.085	249.2	195.6	230.8	226.0	198.9	187.6	0.91	0.95	0.86	1.00	1.00	1.00	0.808050	1.000000	-
Rv2181	-	18	170.4	152.2	177.3	192.5	182.3	139.0	-0.056	-0.214	0.000	0.115	0.039	-0.341	214.0	182.6	212.8	231.0	211.8	161.4	0.80	0.83	0.83	0.83	0.86	0.86	0.983108	1.000000	-
Rv2182c	-	18	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2183c	-	4	63.9	75.0	77.3	97.7	69.9	87.0	-0.255	-0.040	0.000	0.320	-0.135	0.161	85.3	85.7	103.0	130.3	79.9	87.0	0.75	0.88	0.75	0.75	0.88	1.00	0.821957	1.000000	-
Rv2184c	-	16	129.4	142.0	120.5	145.9	126.2	110.6	0.099	0.227	0.000	0.266	0.064	-0.119	144.5	156.6	124.4	166.8	130.3	122.0	0.90	0.91	0.97	0.88	0.97	0.91	0.561913	1.000000	-
Rv2185c	TB16.3	13	69.8	96.0	57.6	83.1	83.0	81.5	0.257	0.690	0.000	0.493	0.492	0.467	77.8	99.8	74.9	92.6	89.9	88.3	0.90	0.96	0.77	0.90	0.92	0.92	0.644142	1.000000	-
Rv2186c	-	8	0.7	0.6	0.8	0.6	0.9	1.3	-0.026	-0.041	0.000	-0.043	0.029	0.114	16.4	10.0	12.6	14.8	14.5	10.1	0.04	0.06	0.06	0.04	0.06	0.12	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2187	fadD15	31	149.3	127.6	132.5	133.2	125.2	142.9	0.167	-0.052	0.000	0.008	-0.078	0.105	159.6	129.7	149.3	139.2	131.6	150.1	0.94	0.98	0.89	0.96	0.95	0.95	0.761849	1.000000	-
Rv2188c	-	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2189c	-	10	104.6	114.4	116.1	69.5	96.0	82.9	-0.144	-0.020	0.000	-0.701	-0.261	-0.461	142.6	143.0	178.5	148.9	113.0	103.7	0.73	0.80	0.65	0.47	0.85	0.80	0.213491	1.000000	-
Rv2190c	-	16	96.1	121.9	85.2	99.7	98.1	89.8	0.164	0.492	0.000	0.215	0.192	0.071	115.3	134.5	109.1	111.3	112.1	95.7	0.83	0.91	0.78	0.90	0.88	0.94	0.778822	1.000000	-
Rv2191	-	25	251.3	256.4	260.6	244.0	215.5	213.4	-0.051	-0.023	0.000	-0.093	-0.268	-0.282	273.2	267.1	277.2	254.1	229.3	222.3	0.92	0.96	0.94	0.96	0.94	0.96	0.995469	1.000000	-
Rv2192c	trpD	7	0.0	0.7	0.9	0.0	0.0	0.0	-0.239	-0.046	0.000	-0.239	-0.239	-0.239	0.0	10.0	12.6	0.0	0.0	0.0	0.00	0.07	0.07	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2193	ctaE	14	5.4	4.7	5.4	1.4	1.3	3.7	-0.001	-0.092	0.000	-0.700	-0.722	-0.259	17.3	14.7	30.1	19.3	12.0	17.1	0.31	0.32	0.18	0.07	0.11	0.21	0.000678	0.014154	-
Rv2194	qcrC	11	3.4	6.5	4.3	1.7	0.8	3.8	-0.135	0.311	0.000	-0.473	-0.672	-0.073	18.9	15.9	18.8	18.5	9.0	21.0	0.18	0.41	0.23	0.09	0.09	0.18	0.111757	0.785054	-
Rv2195	qcrA	21	2.2	1.9	2.8	0.0	0.0	2.3	-0.129	-0.175	0.000	-0.649	-0.649	-0.112	15.2	10.2	17.0	0.0	0.0	11.8	0.14	0.19	0.17	0.00	0.00	0.19	0.000003	0.000111	-
Rv2196	qcrB	29	11.8	10.7	10.3	7.8	6.7	11.4	0.134	0.036	0.000	-0.254	-0.394	0.102	68.5	36.5	74.8	75.9	64.4	36.9	0.17	0.29	0.14	0.10	0.10	0.31	0.017390	0.211547	-
Rv2197c	-	10	189.4	159.2	203.7	150.6	176.9	134.3	-0.103	-0.346	0.000	-0.424	-0.198	-0.583	195.9	159.2	226.3	161.3	196.6	141.4	0.97	1.00	0.90	0.93	0.90	0.95	0.770142	1.000000	-
Rv2198c	mmpS3	14	13.9	29.9	27.2	37.8	58.7	12.7	-0.767	0.115	0.000	0.412	0.984	-0.866	25.4	32.2	40.1	40.7	60.9	16.1	0.55	0.93	0.68	0.93	0.96	0.79	0.000000	0.000000	-
Rv2199c	-	6	24.6	23.0	23.9	21.8	23.8	17.9	0.034	-0.044	0.000	-0.109	-0.006	-0.335	110.6	55.2	71.6	130.7	142.6	43.0	0.22	0.42	0.33	0.17	0.17	0.42	0.530534	1.000000	-
Rv2200c	ctaC	18	1.0	0.3	1.4	0.0	0.0	0.3	-0.085	-0.279	0.000	-0.357	-0.357	-0.273	18.7	10.0	25.2	0.0	0.0	10.8	0.06	0.03	0.06	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2201	asnB	27	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2202c	cbhK	17	9.2	19.2	12.5	28.2	50.1	13.5	-0.300	0.464	0.000	0.921	1.652	0.079	20.5	26.1	28.4	33.4	51.6	20.0	0.45	0.74	0.44	0.84	0.97	0.68	0.000000	0.000000	-
Rv2203	-	12	203.8	225.0	215.3	220.0	214.6	185.9	-0.078	0.062	0.000	0.030	-0.004	-0.207	203.8	225.0	215.3	220.0	223.9	185.9	1.00	1.00	1.00	1.00	0.96	1.00	0.927590	1.000000	-
Rv2204c	-	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2205c	-	9	122.6	110.5	120.7	130.8	128.5	117.9	0.021	-0.123	0.000	0.111	0.087	-0.033	127.3	110.5	120.7	141.3	144.6	117.9	0.96	1.00	1.00	0.93	0.89	1.00	0.604356	1.000000	-
Rv2206	-	9	128.4	93.6	87.6	105.6	90.6	103.0	0.528	0.091	0.000	0.257	0.046	0.223	144.5	93.6	92.7	105.6	90.6	103.0	0.89	1.00	0.94	1.00	1.00	1.00	0.175464	1.000000	-
Rv2207	cobT	8	157.5	146.7	154.3	102.0	96.3	107.5	0.029	-0.070	0.000	-0.574	-0.652	-0.501	157.5	156.5	164.5	116.6	110.1	107.5	1.00	0.94	0.94	0.88	0.88	1.00	0.150413	0.944164	-
Rv2208	cobS	9	96.4	78.0	107.3	75.4	99.9	103.0	-0.147	-0.436	0.000	-0.483	-0.099	-0.057	130.2	100.3	138.0	84.8	112.3	115.9	0.74	0.78	0.78	0.89	0.89	0.89	0.752714	1.000000	-
Rv2209	-	23	228.6	241.9	256.2	233.9	237.7	240.7	-0.161	-0.081	0.000	-0.129	-0.106	-0.088	250.4	241.9	287.4	237.3	248.5	251.6	0.91	1.00	0.89	0.99	0.96	0.96	0.327514	1.000000	-
Rv2210c	ilvE	21	14.2	12.9	10.7	6.8	1.4	21.3	0.288	0.193	0.000	-0.414	-1.291	0.744	25.5	21.8	28.1	18.6	11.9	28.9	0.56	0.60	0.38	0.37	0.12	0.74	0.000000	0.000000	-
Rv2211c	gcvT	17	12.6	24.9	8.3	35.7	33.1	22.5	0.412	1.172	0.000	1.618	1.522	1.054	26.9	29.2	35.1	45.5	40.2	29.5	0.47	0.85	0.24	0.78	0.82	0.76	0.000000	0.000002	-
Rv2212	-	9	230.3	186.6	188.0	224.2	246.8	184.9	0.286	-0.010	0.000	0.248	0.384	-0.023	282.7	197.6	225.6	242.1	246.8	256.1	0.81	0.94	0.83	0.93	1.00	0.72	0.325909	1.000000	-
Rv2213	pepB	12	152.5	150.1	211.1	188.6	185.3	161.2	-0.456	-0.478	0.000	-0.159	-0.183	-0.379	166.3	189.7	230.3	234.1	234.0	184.2	0.92	0.79	0.92	0.81	0.79	0.88	0.479499	1.000000	-
Rv2214c	ephD	26	105.5	91.1	120.3	100.6	110.1	78.1	-0.182	-0.383	0.000	-0.248	-0.122	-0.593	128.6	98.7	149.0	120.7	127.3	96.7	0.82	0.92	0.81	0.83	0.87	0.81	0.441688	1.000000	-
Rv2215	dlaT	13	4.5	4.3	1.9	0.3	0.6	2.3	0.449	0.425	0.000	-0.380	-0.321	0.079	21.8	18.7	25.2	13.0	14.5	10.1	0.21	0.23	0.08	0.03	0.04	0.23	0.005746	0.088856	-
Rv2216	-	11	376.7	299.2	318.2	311.3	295.6	326.3	0.240	-0.087	0.000	-0.031	-0.105	0.036	401.0	346.4	350.0	321.0	295.6	341.8	0.94	0.86	0.91	0.97	1.00	0.95	0.960849	1.000000	-
Rv2217	lipB	9	14.7	16.4	2.8	11.8	4.2	8.0	1.338	1.453	0.000	1.108	0.240	0.732	99.4	147.3	50.5	106.5	25.3	47.8	0.15	0.11	0.06	0.11	0.17	0.17	0.319336	1.000000	-
Rv2218	lipA	11	0.4	2.7	0.6	0.4	0.0	0.5	-0.058	0.474	0.000	-0.036	-0.156	-0.021	11.6	12.1	12.6	14.4	0.0	10.8	0.03	0.23	0.05	0.03	0.00	0.05	0.345530	1.000000	-
Rv2219	-	7	3.0	8.0	0.0	4.7	6.6	3.6	0.671	1.375	0.000	0.962	1.211	0.775	15.6	18.6	0.0	16.6	18.4	12.5	0.19	0.43	0.00	0.29	0.36	0.29	0.158711	0.974691	-
Rv2219A	-	2	124.6	82.1	87.7	65.1	38.8	61.5	0.483	-0.090	0.000	-0.404	-1.082	-0.479	124.6	82.1	87.7	65.1	38.8	61.5	1.00	1.00	1.00	1.00	1.00	1.00	0.000613	0.013010	-
Rv2220	glnA1	25	0.3	0.2	0.0	0.0	0.0	0.0	0.087	0.057	0.000	0.000	0.000	0.000	23.3	10.0	0.0	0.0	0.0	0.0	0.01	0.02	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2221c	glnE	35	5.7	7.8	8.7	1.3	1.2	4.8	-0.347	-0.088	0.000	-1.109	-1.131	-0.478	31.7	23.9	30.3	15.5	14.4	18.7	0.18	0.33	0.29	0.09	0.09	0.26	0.000004	0.000137	-
Rv2222c	glnA2	15	105.0	159.1	133.6	149.8	198.2	145.9	-0.333	0.244	0.000	0.159	0.552	0.123	109.9	164.6	143.1	156.7	198.2	156.3	0.96	0.97	0.93	0.96	1.00	0.93	0.099294	0.741066	-
Rv2223c	-	27	210.1	186.4	187.6	198.3	195.7	203.0	0.160	-0.008	0.000	0.078	0.060	0.111	233.1	201.4	225.1	236.2	211.4	219.2	0.90	0.93	0.83	0.84	0.93	0.93	0.848335	1.000000	-
Rv2224c	-	26	228.1	215.2	199.2	241.1	246.5	199.8	0.191	0.109	0.000	0.269	0.300	0.004	243.7	228.4	220.4	272.5	267.0	203.7	0.94	0.94	0.90	0.88	0.92	0.98	0.309326	1.000000	-
Rv2225	panB	11	121.4	134.7	132.6	113.6	121.1	150.7	-0.123	0.022	0.000	-0.215	-0.127	0.178	133.5	134.7	138.9	120.9	133.2	157.9	0.91	1.00	0.95	0.94	0.91	0.95	0.908212	1.000000	-
Rv2226	-	24	143.8	144.0	149.0	143.0	155.4	124.7	-0.049	-0.047	0.000	-0.057	0.059	-0.248	184.9	177.2	178.8	151.5	173.4	145.9	0.78	0.81	0.83	0.94	0.90	0.85	0.342092	1.000000	-
Rv2227	-	18	97.5	109.2	118.5	120.5	110.5	107.6	-0.269	-0.112	0.000	0.023	-0.097	-0.133	114.5	131.1	137.6	147.8	128.3	121.1	0.85	0.83	0.86	0.81	0.86	0.89	0.971967	1.000000	-
Rv2228c	-	16	11.9	17.6	11.9	9.2	12.9	14.0	-0.003	0.418	0.000	-0.248	0.084	0.170	33.5	46.9	29.3	24.6	34.4	37.4	0.35	0.38	0.41	0.38	0.38	0.38	0.353089	1.000000	-
Rv2229c	-	4	19.9	17.9	36.5	24.9	14.0	12.8	-0.742	-0.862	0.000	-0.474	-1.130	-1.221	34.0	23.8	73.1	29.9	18.7	20.5	0.58	0.75	0.50	0.83	0.75	0.62	0.058903	0.529332	-
Rv2230c	-	15	82.0	83.8	84.3	72.1	92.1	66.2	-0.036	-0.007	0.000	-0.211	0.122	-0.326	94.7	104.8	101.1	92.7	106.3	90.3	0.87	0.80	0.83	0.78	0.87	0.73	0.823987	1.000000	-
Rv2231c	cobC	15	95.5	67.0	70.8	80.0	74.7	74.2	0.407	-0.073	0.000	0.166	0.073	0.064	113.0	95.8	96.5	94.7	83.0	85.6	0.84	0.70	0.73	0.84	0.90	0.87	0.720408	1.000000	-
Rv2232	-	10	86.5	87.3	88.2	100.6	99.6	59.5	-0.027	-0.014	0.000	0.179	0.167	-0.530	117.9	109.1	110.3	137.1	117.2	91.6	0.73	0.80	0.80	0.73	0.85	0.65	0.853668	1.000000	-
Rv2234	ptpA	7	71.6	57.5	49.2	76.3	71.9	63.5	0.500	0.206	0.000	0.586	0.506	0.338	83.5	67.0	68.8	94.3	83.9	63.5	0.86	0.86	0.71	0.81	0.86	1.00	0.526768	1.000000	-
Rv2235	-	14	5.4	8.4	9.8	1.0	2.5	8.2	-0.502	-0.142	0.000	-1.310	-0.976	-0.165	28.6	15.7	30.4	13.5	11.8	17.6	0.19	0.54	0.32	0.07	0.21	0.46	0.000024	0.000695	-
Rv2236c	cobD	10	50.7	44.1	67.7	63.6	55.7	45.1	-0.384	-0.566	0.000	-0.084	-0.260	-0.538	76.1	63.0	79.7	100.4	92.9	64.4	0.67	0.70	0.85	0.63	0.60	0.70	0.359778	1.000000	-
Rv2237	-	17	118.3	103.1	120.7	105.7	106.5	125.3	-0.028	-0.218	0.000	-0.184	-0.173	0.052	125.7	125.2	136.8	122.5	116.8	133.1	0.94	0.82	0.88	0.86	0.91	0.94	0.837355	1.000000	-
Rv2238c	ahpE	4	17.3	9.1	31.3	23.8	26.2	12.8	-0.700	-1.365	0.000	-0.331	-0.219	-1.023	26.0	36.3	41.7	35.7	29.9	34.2	0.67	0.25	0.75	0.67	0.88	0.38	0.171337	1.000000	-
Rv2239c	-	4	45.2	88.7	61.8	125.4	178.4	37.5	-0.411	0.489	0.000	0.965	1.457	-0.651	49.3	88.7	70.6	125.4	178.4	42.9	0.92	1.00	0.88	1.00	1.00	0.88	0.045937	0.450337	-
Rv2240c	-	11	197.6	212.4	231.3	264.8	208.1	167.4	-0.223	-0.121	0.000	0.191	-0.149	-0.455	224.8	245.9	282.8	291.3	240.9	167.4	0.88	0.86	0.82	0.91	0.86	1.00	0.358284	1.000000	-
Rv2241	aceE	53	41.9	62.1	28.8	36.8	26.9	46.7	0.473	0.990	0.000	0.307	-0.085	0.614	60.6	68.6	49.2	46.1	38.5	52.1	0.69	0.91	0.58	0.80	0.70	0.90	0.000000	0.000000	-
Rv2242	-	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2243	fabD	5	0.0	0.0	1.3	0.0	0.0	0.0	-0.324	-0.324	0.000	-0.324	-0.324	-0.324	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.10	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2244	acpP	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2245	kasA	13	0.0	0.0	0.0	0.0	0.0	0.4	0.000	0.000	0.000	0.000	0.000	0.115	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2246	kasB	14	0.0	0.0	0.0	1.7	7.1	0.0	0.000	0.000	0.000	0.412	1.275	0.000	0.0	0.0	0.0	17.4	19.9	0.0	0.00	0.00	0.00	0.10	0.36	0.00	0.000001	0.000023	-
Rv2247	accD6	13	0.0	0.0	0.5	0.0	1.3	0.4	-0.133	-0.133	0.000	-0.133	0.188	-0.018	0.0	0.0	12.6	0.0	10.8	10.8	0.00	0.00	0.04	0.00	0.12	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2248	-	11	44.8	47.2	49.3	62.4	45.6	56.4	-0.124	-0.056	0.000	0.312	-0.102	0.177	70.4	57.7	60.2	71.0	52.8	72.9	0.64	0.82	0.82	0.88	0.86	0.77	0.541128	1.000000	-
Rv2249c	glpD1	18	104.2	73.6	87.0	68.6	69.6	87.4	0.247	-0.227	0.000	-0.322	-0.303	0.006	137.2	110.4	111.9	115.8	83.5	101.5	0.76	0.67	0.78	0.59	0.83	0.86	0.109423	0.783839	-
Rv2250c	-	8	178.7	141.4	137.5	148.4	140.0	150.6	0.366	0.039	0.000	0.106	0.025	0.127	178.7	174.0	169.2	148.4	140.0	150.6	1.00	0.81	0.81	1.00	1.00	1.00	0.094390	0.717365	-
Rv2250A	-	3	75.5	37.3	61.6	48.3	74.9	22.7	0.274	-0.653	0.000	-0.321	0.264	-1.266	75.5	44.8	61.6	72.4	74.9	27.2	1.00	0.83	1.00	0.67	1.00	0.83	0.075008	0.623916	-
Rv2251	-	8	129.5	79.0	128.4	100.8	101.6	89.6	0.012	-0.667	0.000	-0.334	-0.324	-0.496	135.1	105.3	146.7	110.0	116.1	102.4	0.96	0.75	0.88	0.92	0.88	0.88	0.761960	1.000000	-
Rv2252	-	17	27.2	30.4	38.0	23.4	33.6	24.6	-0.416	-0.278	0.000	-0.595	-0.153	-0.535	39.6	51.7	56.1	36.2	54.5	44.1	0.69	0.59	0.68	0.65	0.62	0.56	0.145275	0.930416	-
Rv2253	-	12	15.3	21.2	17.5	23.5	32.6	30.4	-0.145	0.222	0.000	0.342	0.743	0.655	46.0	42.5	52.5	56.4	71.2	56.2	0.33	0.50	0.33	0.42	0.46	0.54	0.815255	1.000000	-
Rv2254c	-	5	165.6	43.6	128.0	140.2	159.8	86.8	0.359	-1.452	0.000	0.127	0.310	-0.535	207.0	109.0	142.2	175.3	199.8	124.0	0.80	0.40	0.90	0.80	0.80	0.70	0.342862	1.000000	-
Rv2255c	-	1	68.2	77.3	108.9	122.8	46.0	30.4	-0.638	-0.469	0.000	0.166	-1.161	-1.689	68.2	77.3	108.9	122.8	46.0	30.4	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2256c	-	6	0.0	4.2	5.3	0.0	0.0	2.5	-1.037	-0.153	0.000	-1.037	-1.037	-0.458	0.0	12.7	31.5	0.0	0.0	9.9	0.00	0.33	0.17	0.00	0.00	0.25	0.009221	0.130939	-
Rv2257c	-	7	146.3	157.2	158.6	87.0	105.4	164.9	-0.113	-0.013	0.000	-0.830	-0.567	0.054	170.7	169.2	185.1	101.5	123.0	164.9	0.86	0.93	0.86	0.86	0.86	1.00	0.571786	1.000000	-
Rv2258c	-	13	237.9	226.1	224.6	190.2	186.6	214.3	0.082	0.009	0.000	-0.234	-0.261	-0.066	237.9	235.1	224.6	200.5	186.6	214.3	1.00	0.96	1.00	0.95	1.00	1.00	0.751937	1.000000	-
Rv2259	adhE2	13	51.4	49.7	62.9	52.5	48.7	58.2	-0.270	-0.313	0.000	-0.242	-0.339	-0.105	69.1	56.2	77.9	66.0	52.8	58.2	0.74	0.88	0.81	0.79	0.92	1.00	0.237551	1.000000	-
Rv2260	-	5	41.2	60.1	71.2	61.0	79.6	70.6	-0.721	-0.228	0.000	-0.207	0.151	-0.011	56.2	60.1	89.0	91.5	88.5	78.5	0.73	1.00	0.80	0.67	0.90	0.90	0.298147	1.000000	-
Rv2261c	-	4	173.7	216.1	236.7	244.5	268.1	239.6	-0.435	-0.129	0.000	0.046	0.176	0.017	173.7	216.1	236.7	244.5	268.1	239.6	1.00	1.00	1.00	1.00	1.00	1.00	0.676588	1.000000	-
Rv2262c	-	14	223.6	237.3	232.9	214.8	203.9	201.0	-0.057	0.027	0.000	-0.114	-0.188	-0.208	240.8	255.6	250.8	250.6	237.9	225.1	0.93	0.93	0.93	0.86	0.86	0.89	0.967386	1.000000	-
Rv2263	-	12	255.3	212.7	222.5	247.5	234.8	234.9	0.194	-0.064	0.000	0.151	0.076	0.076	255.3	212.7	242.7	270.0	234.8	256.2	1.00	1.00	0.92	0.92	1.00	0.92	0.269675	1.000000	-
Rv2264c	-	26	145.9	162.8	139.2	167.0	142.8	159.8	0.065	0.218	0.000	0.254	0.035	0.192	175.1	169.3	172.4	186.1	145.6	169.6	0.83	0.96	0.81	0.90	0.98	0.94	0.150735	0.944164	-
Rv2265	-	14	193.2	176.9	154.2	178.9	163.7	184.4	0.316	0.192	0.000	0.207	0.084	0.250	193.2	176.9	159.9	178.9	163.7	184.4	1.00	1.00	0.96	1.00	1.00	1.00	0.825694	1.000000	-
Rv2266	cyp124	16	132.8	114.7	125.5	128.7	116.1	139.5	0.079	-0.125	0.000	0.035	-0.107	0.147	148.3	122.3	133.9	137.3	119.9	144.0	0.90	0.94	0.94	0.94	0.97	0.97	0.965179	1.000000	-
Rv2267c	-	35	27.6	27.1	22.0	28.6	29.7	30.7	0.274	0.251	0.000	0.316	0.361	0.405	47.6	35.8	45.3	42.3	38.5	43.9	0.58	0.76	0.49	0.68	0.77	0.70	0.092139	0.708520	-
Rv2268c	cyp128	25	64.5	65.4	75.3	67.2	57.4	52.4	-0.208	-0.189	0.000	-0.153	-0.364	-0.486	84.9	93.5	96.6	77.6	79.8	68.9	0.76	0.70	0.78	0.87	0.72	0.76	0.326776	1.000000	-
Rv2269c	-	11	76.0	100.1	92.7	104.0	86.2	87.8	-0.271	0.106	0.000	0.158	-0.099	-0.074	125.4	146.9	127.5	149.3	135.5	128.8	0.61	0.68	0.73	0.70	0.64	0.68	0.995954	1.000000	-
Rv2270	lppN	10	90.6	99.9	100.2	84.6	92.7	94.2	-0.138	-0.004	0.000	-0.231	-0.106	-0.085	118.2	111.0	117.9	90.7	115.9	104.6	0.77	0.90	0.85	0.93	0.80	0.90	0.746470	1.000000	-
Rv2271	-	5	113.4	119.0	114.2	112.0	134.6	133.3	-0.010	0.056	0.000	-0.028	0.228	0.214	113.4	119.0	114.2	112.0	134.6	133.3	1.00	1.00	1.00	1.00	1.00	1.00	0.918053	1.000000	-
Rv2272	-	4	94.2	78.7	65.0	92.8	53.9	51.6	0.504	0.258	0.000	0.483	-0.249	-0.305	102.8	78.7	65.0	101.3	53.9	51.6	0.92	1.00	1.00	0.92	1.00	1.00	0.565031	1.000000	-
Rv2273	-	5	169.7	157.1	139.0	132.9	105.7	150.3	0.279	0.171	0.000	-0.063	-0.379	0.108	212.1	196.4	154.5	132.9	132.2	150.3	0.80	0.80	0.90	1.00	0.80	1.00	0.230694	1.000000	-
Rv2274c	-	7	28.0	46.6	44.6	36.1	31.9	49.9	-0.586	0.058	0.000	-0.269	-0.428	0.148	36.8	54.4	48.0	42.2	40.5	63.5	0.76	0.86	0.93	0.86	0.79	0.79	0.313683	1.000000	-
Rv2275	-	17	37.5	54.3	52.7	54.3	52.4	45.4	-0.442	0.039	0.000	0.040	-0.008	-0.195	59.7	65.9	64.0	67.6	71.2	57.2	0.63	0.82	0.82	0.80	0.74	0.79	0.622525	1.000000	-
Rv2276	cyp121	17	46.9	46.1	40.5	41.8	36.2	44.7	0.189	0.168	0.000	0.041	-0.144	0.129	64.6	60.3	57.4	49.6	45.5	54.3	0.73	0.76	0.71	0.84	0.79	0.82	0.891640	1.000000	-
Rv2277c	-	11	80.4	65.9	57.6	69.7	78.0	96.1	0.447	0.179	0.000	0.255	0.407	0.692	132.6	103.5	70.4	104.5	107.3	151.1	0.61	0.64	0.82	0.67	0.73	0.64	0.164127	0.993726	-
Rv2278	-	4	220.2	229.3	208.1	226.0	210.1	156.7	0.079	0.137	0.000	0.116	0.013	-0.398	220.2	229.3	208.1	226.0	210.1	156.7	1.00	1.00	1.00	1.00	1.00	1.00	0.883950	1.000000	-
Rv2279	-	21	289.1	290.7	324.8	306.5	291.0	303.2	-0.165	-0.158	0.000	-0.082	-0.156	-0.098	371.7	348.8	413.4	386.2	339.5	326.5	0.78	0.83	0.79	0.79	0.86	0.93	0.905993	1.000000	-
Rv2280	-	17	66.5	57.1	62.4	63.0	66.1	54.1	0.086	-0.119	0.000	0.012	0.076	-0.189	84.8	71.9	78.6	78.3	77.5	68.1	0.78	0.79	0.79	0.80	0.85	0.79	0.999758	1.000000	-
Rv2281	pitB	23	48.9	67.3	69.8	54.7	60.9	65.9	-0.473	-0.048	0.000	-0.325	-0.182	-0.078	71.8	110.6	103.6	78.6	84.9	81.9	0.68	0.61	0.67	0.70	0.72	0.80	0.296593	1.000000	-
Rv2282c	-	11	96.2	50.2	52.8	53.9	67.8	44.8	0.808	-0.067	0.000	0.027	0.333	-0.215	138.0	78.9	68.3	77.3	82.9	65.7	0.70	0.64	0.77	0.70	0.82	0.68	0.221955	1.000000	-
Rv2283	-	2	81.2	33.0	47.0	32.8	35.6	47.2	0.729	-0.454	0.000	-0.460	-0.358	0.006	81.2	33.0	62.7	39.4	35.6	47.2	1.00	1.00	0.75	0.83	1.00	1.00	0.302781	1.000000	-
Rv2284	lipM	26	96.1	95.5	92.5	98.0	99.0	89.4	0.053	0.043	0.000	0.078	0.093	-0.046	117.2	107.9	111.9	107.6	109.6	105.7	0.82	0.88	0.83	0.91	0.90	0.85	0.970379	1.000000	-
Rv2285	-	20	130.6	133.8	120.2	131.9	137.2	130.3	0.115	0.148	0.000	0.129	0.183	0.112	135.1	152.9	133.6	138.9	144.4	137.1	0.97	0.88	0.90	0.95	0.95	0.95	0.697059	1.000000	-
Rv2286c	-	9	182.2	133.1	167.3	167.1	156.1	164.9	0.120	-0.320	0.000	-0.002	-0.097	-0.020	246.0	171.1	200.8	214.9	165.3	164.9	0.74	0.78	0.83	0.78	0.94	1.00	0.334290	1.000000	-
Rv2287	yjcE	17	166.1	138.1	159.3	149.1	145.4	135.8	0.059	-0.200	0.000	-0.093	-0.128	-0.222	192.5	156.5	186.7	172.8	159.4	144.3	0.86	0.88	0.85	0.86	0.91	0.94	0.991256	1.000000	-
Rv2288	-	4	92.4	114.6	102.9	89.4	103.5	93.1	-0.148	0.148	0.000	-0.194	0.007	-0.138	92.4	114.6	102.9	89.4	103.5	93.1	1.00	1.00	1.00	1.00	1.00	1.00	0.954327	1.000000	-
Rv2289	cdh	21	105.0	117.0	109.3	129.6	119.4	121.3	-0.055	0.095	0.000	0.236	0.122	0.145	140.7	129.4	139.1	160.0	128.5	159.2	0.75	0.90	0.79	0.81	0.93	0.76	0.415216	1.000000	-
Rv2290	lppO	11	89.4	93.0	97.9	82.0	81.2	93.4	-0.125	-0.070	0.000	-0.242	-0.256	-0.064	147.4	113.7	143.6	108.3	89.3	108.2	0.61	0.82	0.68	0.76	0.91	0.86	0.538413	1.000000	-
Rv2291	sseB	16	105.0	90.7	108.3	128.7	120.9	95.1	-0.043	-0.245	0.000	0.239	0.152	-0.179	117.2	111.6	128.4	137.3	120.9	108.7	0.90	0.81	0.84	0.94	1.00	0.88	0.217397	1.000000	-
Rv2292c	-	2	90.0	56.3	122.1	74.7	61.3	73.9	-0.421	-1.052	0.000	-0.674	-0.939	-0.689	90.0	56.3	162.9	74.7	61.3	73.9	1.00	1.00	0.75	1.00	1.00	1.00	0.524925	1.000000	-
Rv2293c	-	11	52.9	66.1	63.8	65.0	72.9	93.9	-0.249	0.047	0.000	0.025	0.179	0.523	56.3	66.1	66.9	69.2	72.9	93.9	0.94	1.00	0.95	0.94	1.00	1.00	0.173451	1.000000	-
Rv2294	-	18	153.0	155.6	141.5	141.2	144.5	172.8	0.109	0.132	0.000	-0.004	0.029	0.279	162.0	164.7	145.6	149.5	153.0	177.7	0.94	0.94	0.97	0.94	0.94	0.97	0.974524	1.000000	-
Rv2295	-	10	26.7	28.6	25.3	35.4	30.7	43.5	0.065	0.146	0.000	0.413	0.234	0.676	34.9	30.1	36.2	44.3	30.7	43.5	0.77	0.95	0.70	0.80	1.00	1.00	0.015393	0.192534	-
Rv2296	-	15	151.0	154.9	124.1	155.6	136.5	153.7	0.274	0.309	0.000	0.315	0.132	0.299	194.2	185.8	132.9	184.2	151.6	192.2	0.78	0.83	0.93	0.84	0.90	0.80	0.393599	1.000000	-
Rv2297	-	8	74.0	88.0	81.6	89.0	85.1	87.3	-0.134	0.103	0.000	0.117	0.056	0.091	104.4	117.4	118.8	101.7	90.7	99.7	0.71	0.75	0.69	0.88	0.94	0.88	0.842938	1.000000	-
Rv2298	-	16	222.3	188.1	207.2	198.0	215.4	187.2	0.099	-0.136	0.000	-0.064	0.054	-0.143	237.1	207.6	221.0	211.2	215.4	199.7	0.94	0.91	0.94	0.94	1.00	0.94	0.904675	1.000000	-
Rv2299c	htpG	24	121.5	146.5	138.8	132.3	129.6	145.5	-0.184	0.076	0.000	-0.066	-0.095	0.066	136.7	159.8	148.0	140.1	132.4	148.6	0.89	0.92	0.94	0.94	0.98	0.98	0.701771	1.000000	-
Rv2300c	-	14	36.0	40.8	28.9	35.0	37.2	39.3	0.276	0.435	0.000	0.240	0.318	0.388	60.5	57.1	53.9	58.8	49.7	68.9	0.60	0.71	0.54	0.60	0.75	0.57	0.877230	1.000000	-
Rv2301	cut2	9	223.2	207.7	229.4	205.8	224.7	246.9	-0.039	-0.141	0.000	-0.153	-0.030	0.104	223.2	207.7	242.9	205.8	224.7	246.9	1.00	1.00	0.94	1.00	1.00	1.00	0.885666	1.000000	-
Rv2302	-	4	399.9	373.8	369.2	264.5	324.8	341.7	0.114	0.018	0.000	-0.474	-0.182	-0.110	399.9	373.8	369.2	264.5	324.8	341.7	1.00	1.00	1.00	1.00	1.00	1.00	0.723772	1.000000	-
Rv2303c	-	16	113.8	106.5	92.6	96.1	90.3	117.4	0.284	0.192	0.000	0.051	-0.035	0.327	133.2	121.7	118.5	109.8	99.6	144.6	0.85	0.88	0.78	0.88	0.91	0.81	0.886285	1.000000	-
Rv2304c	-	1	102.0	181.9	160.0	122.3	160.6	116.9	-0.625	0.180	0.000	-0.374	0.005	-0.437	102.0	181.9	160.0	122.3	160.6	116.9	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2305	-	8	201.9	215.2	172.8	170.1	206.6	215.0	0.219	0.309	0.000	-0.022	0.251	0.308	201.9	215.2	172.8	170.1	206.6	215.0	1.00	1.00	1.00	1.00	1.00	1.00	0.802337	1.000000	-
Rv2306A	-	7	378.1	350.4	362.4	387.4	358.8	347.2	0.060	-0.048	0.000	0.095	-0.014	-0.061	417.9	350.4	422.8	387.4	386.4	347.2	0.90	1.00	0.86	1.00	0.93	1.00	0.727763	1.000000	-
Rv2306B	-	5	158.2	158.1	144.7	114.7	121.6	129.3	0.124	0.124	0.000	-0.323	-0.243	-0.157	215.8	158.1	206.8	143.4	135.1	161.6	0.73	1.00	0.70	0.80	0.90	0.80	0.650180	1.000000	-
Rv2307c	-	18	156.0	163.9	163.5	176.7	173.7	178.5	-0.066	0.004	0.000	0.109	0.085	0.123	162.0	173.6	168.2	176.7	173.7	178.5	0.96	0.94	0.97	1.00	1.00	1.00	0.447810	1.000000	-
Rv2307A	-	3	306.3	323.5	286.3	216.4	377.8	300.9	0.096	0.173	0.000	-0.396	0.394	0.070	306.3	485.3	343.6	324.6	377.8	451.3	1.00	0.67	0.83	0.67	1.00	0.67	0.292364	1.000000	-
Rv2307B	-	20	37.2	28.6	50.7	44.2	40.4	51.0	-0.402	-0.731	0.000	-0.178	-0.297	0.008	61.9	44.0	69.9	59.0	53.8	68.0	0.60	0.65	0.72	0.75	0.75	0.75	0.369258	1.000000	-
Rv2307D	-	5	113.4	115.6	113.2	106.1	125.3	149.0	0.002	0.029	0.000	-0.090	0.140	0.382	141.7	115.6	113.2	106.1	156.6	149.0	0.80	1.00	1.00	1.00	0.80	1.00	0.128936	0.861736	-
Rv2308	-	16	34.2	38.5	32.3	31.8	35.3	40.0	0.072	0.224	0.000	-0.016	0.113	0.273	60.8	58.7	60.7	52.7	53.8	55.7	0.56	0.66	0.53	0.60	0.66	0.72	0.996634	1.000000	-
Rv2309c	-	7	83.1	94.6	87.6	105.1	127.5	100.0	-0.071	0.106	0.000	0.251	0.518	0.182	134.3	132.5	136.2	138.0	198.4	127.3	0.62	0.71	0.64	0.76	0.64	0.79	0.969643	1.000000	-
Rv2309A	-	12	137.9	150.3	128.9	143.5	153.7	159.4	0.095	0.215	0.000	0.150	0.245	0.296	146.1	164.0	140.6	156.5	167.6	173.9	0.94	0.92	0.92	0.92	0.92	0.92	0.983208	1.000000	-
Rv2310	-	3	119.3	86.6	100.0	130.4	96.8	61.6	0.244	-0.196	0.000	0.368	-0.044	-0.656	119.3	86.6	100.0	130.4	96.8	61.6	1.00	1.00	1.00	1.00	1.00	1.00	0.213941	1.000000	-
Rv2311	-	7	388.8	331.8	335.1	318.9	337.0	310.7	0.212	-0.014	0.000	-0.070	0.008	-0.107	388.8	331.8	335.1	318.9	337.0	310.7	1.00	1.00	1.00	1.00	1.00	1.00	0.675955	1.000000	-
Rv2312	-	3	255.2	251.1	228.4	242.0	184.4	213.5	0.157	0.134	0.000	0.081	-0.302	-0.095	255.2	251.1	228.4	242.0	184.4	213.5	1.00	1.00	1.00	1.00	1.00	1.00	0.973502	1.000000	-
Rv2313c	-	9	295.7	291.3	274.8	317.8	308.7	297.2	0.104	0.083	0.000	0.206	0.165	0.111	362.9	327.8	309.1	357.5	396.9	314.7	0.81	0.89	0.89	0.89	0.78	0.94	0.947664	1.000000	-
Rv2314c	-	13	169.6	185.6	223.3	201.0	177.0	195.7	-0.387	-0.260	0.000	-0.148	-0.327	-0.186	183.7	241.3	241.9	270.4	219.1	221.2	0.92	0.77	0.92	0.74	0.81	0.88	0.254010	1.000000	-
Rv2315c	-	31	74.5	62.8	71.9	68.0	64.4	68.3	0.047	-0.183	0.000	-0.076	-0.148	-0.070	93.6	90.5	92.9	87.8	78.3	79.9	0.80	0.69	0.77	0.77	0.82	0.85	0.826403	1.000000	-
Rv2316	uspA	10	128.4	111.6	130.1	106.8	119.7	131.4	-0.019	-0.213	0.000	-0.273	-0.115	0.013	160.5	131.3	173.5	118.7	159.7	138.3	0.80	0.85	0.75	0.90	0.75	0.95	0.659193	1.000000	-
Rv2317	uspB	12	43.6	38.2	69.5	50.1	45.5	41.9	-0.617	-0.786	0.000	-0.435	-0.561	-0.667	68.2	57.3	79.4	69.4	57.4	62.9	0.64	0.67	0.88	0.72	0.79	0.67	0.587687	1.000000	-
Rv2318	uspC	30	44.5	52.4	51.8	44.4	41.1	48.5	-0.198	0.014	0.000	-0.202	-0.302	-0.088	61.7	68.3	69.1	62.4	60.1	63.2	0.72	0.77	0.75	0.71	0.68	0.77	0.944343	1.000000	-
Rv2319c	-	14	103.1	87.2	94.6	92.0	87.3	80.0	0.118	-0.111	0.000	-0.038	-0.110	-0.230	135.4	122.1	120.4	124.7	101.8	117.8	0.76	0.71	0.79	0.74	0.86	0.68	0.913945	1.000000	-
Rv2320c	rocE	27	71.3	72.7	66.8	64.2	79.4	79.6	0.089	0.115	0.000	-0.054	0.233	0.236	86.3	77.0	83.9	77.6	85.7	87.7	0.83	0.94	0.80	0.83	0.93	0.91	0.524473	1.000000	-
Rv2321c	rocD2	8	59.2	52.4	51.2	70.8	60.5	55.5	0.192	0.032	0.000	0.433	0.220	0.108	71.0	52.4	81.9	100.0	64.5	63.5	0.83	1.00	0.62	0.71	0.94	0.88	0.082916	0.670997	-
Rv2322c	rocD1	8	64.6	51.2	46.5	61.9	50.4	67.6	0.437	0.126	0.000	0.379	0.106	0.497	86.2	68.2	61.9	82.6	73.3	108.2	0.75	0.75	0.75	0.75	0.69	0.62	0.680524	1.000000	-
Rv2323c	-	20	132.4	150.8	144.0	129.3	133.0	133.7	-0.117	0.064	0.000	-0.151	-0.111	-0.103	172.8	208.0	180.1	172.3	152.0	162.1	0.77	0.72	0.80	0.75	0.88	0.82	0.866244	1.000000	-
Rv2324	-	2	617.1	495.1	648.3	337.5	299.9	323.2	-0.071	-0.386	0.000	-0.931	-1.099	-0.993	617.1	495.1	648.3	337.5	299.9	323.2	1.00	1.00	1.00	1.00	1.00	1.00	0.275243	1.000000	-
Rv2325c	-	7	83.8	107.5	77.7	79.3	95.7	73.2	0.101	0.444	0.000	0.027	0.284	-0.081	103.5	115.8	90.7	111.1	111.7	102.5	0.81	0.93	0.86	0.71	0.86	0.71	0.848183	1.000000	-
Rv2326c	-	22	126.4	119.0	116.6	135.5	139.8	142.2	0.112	0.029	0.000	0.209	0.253	0.276	151.7	127.7	131.5	146.6	150.1	156.4	0.83	0.93	0.89	0.92	0.93	0.91	0.814156	1.000000	-
Rv2327	-	5	59.5	56.0	78.8	48.3	41.9	52.7	-0.378	-0.459	0.000	-0.654	-0.839	-0.539	99.2	70.0	131.3	72.4	69.8	87.8	0.60	0.80	0.60	0.67	0.60	0.60	0.743208	1.000000	-
Rv2328	PE23	12	86.0	76.0	54.7	70.6	81.8	69.1	0.608	0.442	0.000	0.340	0.541	0.313	114.6	101.4	82.0	97.7	103.3	79.0	0.75	0.75	0.67	0.72	0.79	0.88	0.918718	1.000000	-
Rv2329c	narK1	27	92.3	96.7	93.3	97.6	101.3	92.6	-0.015	0.049	0.000	0.063	0.113	-0.010	108.4	104.4	117.1	109.8	105.2	102.0	0.85	0.93	0.80	0.89	0.96	0.91	0.689672	1.000000	-
Rv2330c	lppP	6	33.3	31.4	32.9	37.3	36.0	52.4	0.014	-0.057	0.000	0.157	0.113	0.599	37.4	34.3	43.9	39.4	36.0	52.4	0.89	0.92	0.75	0.94	1.00	1.00	0.280550	1.000000	-
Rv2331	-	5	130.9	124.9	117.1	124.3	109.4	182.8	0.154	0.089	0.000	0.083	-0.094	0.621	130.9	124.9	117.1	124.3	109.4	182.8	1.00	1.00	1.00	1.00	1.00	1.00	0.510054	1.000000	-
Rv2331A	-	4	108.2	98.0	92.0	74.6	80.7	87.1	0.223	0.086	0.000	-0.285	-0.179	-0.075	129.9	130.7	105.2	81.4	107.7	116.2	0.83	0.75	0.88	0.92	0.75	0.75	0.869320	1.000000	-
Rv2332	mez	26	147.6	135.7	123.9	129.9	116.1	129.6	0.243	0.126	0.000	0.065	-0.090	0.062	169.3	156.9	161.1	140.7	128.4	137.6	0.87	0.87	0.77	0.92	0.90	0.94	0.552671	1.000000	-
Rv2333c	-	17	248.0	274.0	291.2	241.7	286.9	255.3	-0.228	-0.086	0.000	-0.264	-0.021	-0.186	248.0	274.0	300.0	246.6	286.9	255.3	1.00	1.00	0.97	0.98	1.00	1.00	0.724383	1.000000	-
Rv2334	cysK1	13	91.2	58.1	113.0	68.3	80.1	73.3	-0.294	-0.903	0.000	-0.687	-0.472	-0.592	111.2	75.5	139.9	88.7	90.5	86.6	0.82	0.77	0.81	0.77	0.88	0.85	0.460789	1.000000	-
Rv2335	cysE	5	174.4	73.0	187.4	118.7	142.6	110.5	-0.101	-1.302	0.000	-0.637	-0.383	-0.736	201.2	81.1	208.3	118.7	178.3	122.8	0.87	0.90	0.90	1.00	0.80	0.90	0.397684	1.000000	-
Rv2336	-	28	25.1	35.2	30.1	36.7	30.8	37.7	-0.220	0.197	0.000	0.247	0.028	0.281	43.1	51.9	51.1	45.3	45.4	52.7	0.58	0.68	0.59	0.81	0.68	0.71	0.165075	0.994969	-
Rv2337c	-	6	197.4	251.1	224.4	208.5	200.3	181.6	-0.181	0.159	0.000	-0.104	-0.161	-0.298	236.8	251.1	269.3	208.5	240.3	181.6	0.83	1.00	0.83	1.00	0.83	1.00	0.390786	1.000000	-
Rv2338c	moeW	34	19.1	25.0	24.8	24.6	28.8	26.6	-0.307	0.009	0.000	-0.010	0.179	0.082	34.2	41.5	42.2	39.3	38.4	43.0	0.56	0.60	0.59	0.63	0.75	0.62	0.404010	1.000000	-
Rv2339	mmpL9	79	48.1	56.7	61.7	59.4	62.0	66.1	-0.329	-0.113	0.000	-0.051	0.007	0.092	78.7	83.7	106.0	82.3	88.3	92.4	0.61	0.68	0.58	0.72	0.70	0.72	0.183946	1.000000	-
Rv2340c	PE_PGRS39	13	240.4	251.5	234.2	245.0	251.3	240.0	0.037	0.101	0.000	0.064	0.099	0.034	267.8	272.4	243.6	251.5	251.3	260.0	0.90	0.92	0.96	0.97	1.00	0.92	0.837810	1.000000	-
Rv2341	lppQ	3	201.0	171.1	189.6	199.6	124.2	147.8	0.082	-0.145	0.000	0.072	-0.591	-0.350	201.0	205.3	189.6	256.6	149.1	147.8	1.00	0.83	1.00	0.78	0.83	1.00	0.882952	1.000000	-
Rv2342	-	3	195.2	184.8	242.6	195.3	179.9	153.2	-0.306	-0.383	0.000	-0.306	-0.421	-0.646	195.2	184.8	242.6	195.3	179.9	153.2	1.00	1.00	1.00	1.00	1.00	1.00	0.867986	1.000000	-
Rv2343c	dnaG	20	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2344c	dgt	22	142.1	189.1	147.8	153.5	161.6	169.5	-0.055	0.345	0.000	0.053	0.125	0.191	164.6	198.1	175.8	166.1	177.8	169.5	0.86	0.95	0.84	0.92	0.91	1.00	0.259652	1.000000	-
Rv2345	-	28	371.2	373.8	346.5	364.4	332.7	347.4	0.098	0.108	0.000	0.072	-0.057	0.004	380.2	373.8	359.3	368.8	338.8	360.3	0.98	1.00	0.96	0.99	0.98	0.96	0.940569	1.000000	-
Rv2346c	esxO	2	240.3	287.4	284.4	235.3	276.0	340.0	-0.239	0.015	0.000	-0.269	-0.043	0.253	240.3	287.4	284.4	235.3	276.0	340.0	1.00	1.00	1.00	1.00	1.00	1.00	0.611521	1.000000	-
Rv2347c	esxP	3	178.8	161.3	148.9	145.0	152.2	153.5	0.257	0.112	0.000	-0.037	0.031	0.043	178.8	161.3	148.9	145.0	152.2	153.5	1.00	1.00	1.00	1.00	1.00	1.00	0.981721	1.000000	-
Rv2348c	-	2	129.2	117.3	132.5	88.5	88.8	131.4	-0.035	-0.169	0.000	-0.556	-0.551	-0.012	129.2	117.3	132.5	88.5	88.8	131.4	1.00	1.00	1.00	1.00	1.00	1.00	0.322086	1.000000	-
Rv2349c	plcC	25	179.4	197.1	152.0	159.0	168.5	191.6	0.231	0.364	0.000	0.063	0.144	0.324	197.8	205.3	165.3	168.0	171.9	191.6	0.91	0.96	0.92	0.95	0.98	1.00	0.450173	1.000000	-
Rv2350c	plcB	21	147.2	150.1	123.5	136.5	156.0	153.0	0.244	0.272	0.000	0.138	0.325	0.298	154.6	150.1	129.7	143.3	156.0	153.0	0.95	1.00	0.95	0.95	1.00	1.00	0.435858	1.000000	-
Rv2351c	plcA	23	265.6	265.5	274.1	263.6	260.0	241.5	-0.045	-0.045	0.000	-0.056	-0.075	-0.180	286.3	284.0	280.2	279.8	278.2	264.5	0.93	0.93	0.98	0.94	0.93	0.91	0.982747	1.000000	-
Rv2352c	PPE38	15	357.1	322.5	348.0	372.9	368.3	332.0	0.037	-0.108	0.000	0.098	0.081	-0.067	357.1	322.5	372.8	372.9	368.3	332.0	1.00	1.00	0.93	1.00	1.00	1.00	0.746268	1.000000	-
Rv2353c	PPE39	22	12.1	12.7	14.2	12.0	13.2	14.2	-0.169	-0.115	0.000	-0.175	-0.080	-0.002	27.5	28.0	39.1	28.3	27.6	26.0	0.44	0.45	0.36	0.42	0.48	0.55	0.856681	1.000000	-
Rv2354	-	4	186.0	243.0	199.9	255.2	209.0	160.8	-0.101	0.276	0.000	0.345	0.063	-0.305	186.0	243.0	199.9	255.2	209.0	160.8	1.00	1.00	1.00	1.00	1.00	1.00	0.804071	1.000000	-
Rv2355	-	21	291.8	280.9	323.7	311.3	284.3	294.4	-0.147	-0.201	0.000	-0.056	-0.184	-0.135	367.7	337.1	424.9	377.1	331.7	334.2	0.79	0.83	0.76	0.83	0.86	0.88	0.993573	1.000000	-
Rv2356c	PPE40	26	123.3	107.6	121.0	103.8	99.7	116.4	0.026	-0.162	0.000	-0.213	-0.268	-0.054	240.5	215.2	233.1	202.3	199.3	201.7	0.51	0.50	0.52	0.51	0.50	0.58	0.999231	1.000000	-
Rv2357c	glyS	28	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2358	-	4	57.7	70.5	56.9	2.3	2.9	64.1	0.019	0.286	0.000	-3.081	-2.963	0.158	57.7	70.5	56.9	13.9	11.8	64.1	1.00	1.00	1.00	0.17	0.25	1.00	0.000000	0.000000	-
Rv2359	furB	5	83.6	88.7	59.4	1.0	0.0	81.7	0.460	0.540	0.000	-3.434	-3.688	0.429	89.6	88.7	66.0	14.4	0.0	81.7	0.93	1.00	0.90	0.07	0.00	1.00	0.000000	0.000000	-
Rv2360c	-	5	334.0	323.1	380.1	300.8	304.5	282.8	-0.184	-0.231	0.000	-0.332	-0.315	-0.420	334.0	323.1	380.1	300.8	304.5	282.8	1.00	1.00	1.00	1.00	1.00	1.00	0.966737	1.000000	-
Rv2361c	-	15	0.0	0.0	0.0	0.6	0.0	0.0	0.000	0.000	0.000	0.176	0.000	0.000	0.0	0.0	0.0	14.6	0.0	0.0	0.00	0.00	0.00	0.04	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2362c	recO	8	193.2	176.8	183.0	195.1	210.6	164.1	0.076	-0.048	0.000	0.090	0.198	-0.153	193.2	176.8	183.0	195.1	224.7	175.1	1.00	1.00	1.00	1.00	0.94	0.94	0.666594	1.000000	-
Rv2363	amiA2	17	95.2	149.2	102.2	147.2	145.3	112.9	-0.097	0.524	0.000	0.506	0.488	0.137	107.9	149.2	119.8	150.2	159.4	116.3	0.88	1.00	0.85	0.98	0.91	0.97	0.054041	0.500286	-
Rv2364c	era	15	0.0	3.0	0.8	0.9	0.3	1.0	-0.224	0.461	0.000	0.024	-0.140	0.047	0.0	11.4	12.6	14.1	9.0	10.3	0.00	0.27	0.07	0.07	0.03	0.10	0.029410	0.319001	-
Rv2365c	-	2	295.9	315.1	239.1	271.9	141.6	209.7	0.302	0.391	0.000	0.182	-0.736	-0.185	295.9	315.1	239.1	271.9	141.6	209.7	1.00	1.00	1.00	1.00	1.00	1.00	0.000005	0.000173	-
Rv2366c	-	19	120.5	132.7	103.2	120.6	119.6	108.2	0.215	0.347	0.000	0.215	0.203	0.065	137.4	140.0	112.0	132.2	133.7	120.9	0.88	0.95	0.92	0.91	0.89	0.89	0.951312	1.000000	-
Rv2367c	-	7	2.6	8.0	3.6	5.5	7.1	5.3	-0.171	0.592	0.000	0.282	0.493	0.261	18.5	18.6	16.8	19.1	16.6	14.9	0.14	0.43	0.21	0.29	0.43	0.36	0.909604	1.000000	-
Rv2368c	phoH1	17	155.1	148.1	159.9	136.0	146.9	164.7	-0.043	-0.107	0.000	-0.226	-0.119	0.041	164.8	148.1	164.7	136.0	146.9	174.9	0.94	1.00	0.97	1.00	1.00	0.94	0.340780	1.000000	-
Rv2369c	-	3	137.0	147.8	147.2	186.6	120.3	187.2	-0.101	0.005	0.000	0.332	-0.281	0.336	137.0	147.8	147.2	186.6	120.3	187.2	1.00	1.00	1.00	1.00	1.00	1.00	0.846038	1.000000	-
Rv2370c	-	17	150.6	145.3	139.5	147.2	155.1	160.7	0.107	0.057	0.000	0.075	0.148	0.197	163.4	159.4	158.1	156.4	164.8	160.7	0.92	0.91	0.88	0.94	0.94	1.00	0.836834	1.000000	-
Rv2371	PE_PGRS40	1	18.7	0.0	6.3	0.0	26.2	0.0	1.069	-1.176	0.000	-1.176	1.465	-1.176	28.1	0.0	12.6	0.0	26.2	0.0	0.67	0.00	0.50	0.00	1.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2372c	-	4	421.9	288.7	340.8	351.2	303.1	313.8	0.304	-0.235	0.000	0.043	-0.167	-0.117	460.3	288.7	340.8	351.2	303.1	313.8	0.92	1.00	1.00	1.00	1.00	1.00	0.972905	1.000000	-
Rv2373c	dnaJ2	8	11.3	16.6	11.0	6.4	3.5	15.2	0.028	0.433	0.000	-0.484	-0.910	0.337	24.6	33.1	35.1	19.3	14.0	24.3	0.46	0.50	0.31	0.33	0.25	0.62	0.062490	0.551630	-
Rv2374c	hrcA	21	49.8	50.1	49.1	47.9	31.8	42.4	0.019	0.026	0.000	-0.034	-0.555	-0.190	65.4	54.0	66.6	56.9	39.3	45.7	0.76	0.93	0.74	0.84	0.81	0.93	0.107819	0.775134	-
Rv2375	-	8	135.3	157.3	142.1	139.3	170.3	169.6	-0.068	0.142	0.000	-0.027	0.253	0.247	147.6	157.3	151.6	139.3	170.3	169.6	0.92	1.00	0.94	1.00	1.00	1.00	0.778573	1.000000	-
Rv2376c	cfp2	2	681.4	679.3	794.2	579.9	494.5	572.3	-0.219	-0.224	0.000	-0.450	-0.678	-0.469	681.4	679.3	794.2	579.9	494.5	572.3	1.00	1.00	1.00	1.00	1.00	1.00	0.003762	0.062190	-
Rv2377c	mbtH	2	322.9	213.5	270.1	244.1	176.0	180.2	0.254	-0.332	0.000	-0.143	-0.604	-0.570	322.9	213.5	270.1	244.1	351.9	360.5	1.00	1.00	1.00	1.00	0.50	0.50	0.239674	1.000000	-
Rv2378c	mbtG	8	248.5	196.1	206.7	210.5	213.0	223.2	0.260	-0.074	0.000	0.025	0.042	0.108	331.4	241.4	300.7	210.5	227.1	238.1	0.75	0.81	0.69	1.00	0.94	0.94	0.158784	0.974691	-
Rv2379c	mbtF	59	153.1	139.5	147.5	137.1	148.0	126.2	0.051	-0.078	0.000	-0.102	0.004	-0.218	193.5	177.0	179.5	156.6	166.3	146.0	0.79	0.79	0.82	0.88	0.89	0.86	0.346437	1.000000	-
Rv2380c	mbtE	72	134.9	128.9	133.8	132.8	121.0	126.4	0.012	-0.052	0.000	-0.010	-0.140	-0.079	155.9	142.8	161.9	153.4	133.0	135.8	0.87	0.90	0.83	0.87	0.91	0.93	0.683060	1.000000	-
Rv2381c	mbtD	40	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2382c	mbtC	16	149.2	156.3	140.1	174.4	161.6	174.3	0.088	0.153	0.000	0.306	0.200	0.306	152.4	166.7	149.4	178.1	161.6	174.3	0.98	0.94	0.94	0.98	1.00	1.00	0.354454	1.000000	-
Rv2383c	mbtB	47	168.5	189.8	177.3	194.3	182.6	176.7	-0.071	0.096	0.000	0.128	0.041	-0.005	198.0	207.5	193.8	207.5	197.3	190.9	0.85	0.91	0.91	0.94	0.93	0.93	0.745405	1.000000	-
Rv2384	mbtA	20	188.3	214.6	169.8	196.6	196.6	190.6	0.145	0.330	0.000	0.206	0.206	0.162	191.4	214.6	183.5	206.9	196.6	190.6	0.98	1.00	0.93	0.95	1.00	1.00	0.340245	1.000000	-
Rv2385	mbtJ	17	104.0	132.4	120.2	153.9	157.3	130.7	-0.201	0.134	0.000	0.343	0.374	0.116	110.5	140.7	123.9	167.0	167.1	138.9	0.94	0.94	0.97	0.92	0.94	0.94	0.225609	1.000000	-
Rv2386c	mbtI	16	33.5	46.1	34.6	44.6	53.3	58.7	-0.042	0.369	0.000	0.325	0.559	0.685	51.8	70.3	73.8	62.9	65.6	72.2	0.65	0.66	0.47	0.71	0.81	0.81	0.214388	1.000000	-
Rv2387	-	23	190.3	192.3	173.9	194.6	191.9	186.0	0.126	0.141	0.000	0.158	0.138	0.095	196.0	196.6	181.8	197.5	191.9	186.0	0.97	0.98	0.96	0.99	1.00	1.00	0.935973	1.000000	-
Rv2388c	hemN	19	210.1	222.1	215.3	228.5	203.4	244.0	-0.034	0.044	0.000	0.084	-0.080	0.176	254.8	272.3	272.7	250.5	227.3	272.7	0.82	0.82	0.79	0.91	0.89	0.89	0.916772	1.000000	-
Rv2389c	rpfD	7	118.4	120.4	124.3	128.2	136.1	142.4	-0.068	-0.045	0.000	0.042	0.125	0.188	138.1	120.4	145.1	149.5	136.1	166.1	0.86	1.00	0.86	0.86	1.00	0.86	0.643049	1.000000	-
Rv2390c	-	5	68.2	51.0	54.4	47.0	72.0	75.0	0.303	-0.083	0.000	-0.192	0.376	0.429	127.9	72.9	77.7	78.3	90.0	75.0	0.53	0.70	0.70	0.60	0.80	1.00	0.491340	1.000000	-
Rv2391	nirA	19	58.6	49.1	65.8	52.0	58.6	28.9	-0.155	-0.389	0.000	-0.312	-0.156	-1.062	72.6	58.3	83.4	61.8	69.5	42.3	0.81	0.84	0.79	0.84	0.84	0.68	0.196157	1.000000	-
Rv2392	cysH	12	41.1	15.7	40.7	41.5	36.2	13.0	0.012	-1.145	0.000	0.026	-0.147	-1.340	67.2	26.8	61.0	62.3	51.2	19.6	0.61	0.58	0.67	0.67	0.71	0.67	0.004367	0.069695	-
Rv2393	-	6	57.2	89.1	63.6	74.0	50.3	58.7	-0.142	0.457	0.000	0.204	-0.310	-0.107	85.7	133.6	76.3	74.0	54.9	58.7	0.67	0.67	0.83	1.00	0.92	1.00	0.037095	0.383443	-
Rv2394	ggtB	30	147.4	136.9	158.5	136.3	149.6	140.8	-0.101	-0.204	0.000	-0.210	-0.081	-0.165	158.0	149.4	179.4	155.3	157.4	145.7	0.93	0.92	0.88	0.88	0.95	0.97	0.791996	1.000000	-
Rv2395	-	33	178.2	152.0	179.2	149.4	160.5	182.2	-0.008	-0.230	0.000	-0.254	-0.155	0.023	212.6	159.3	200.5	155.7	170.8	185.0	0.84	0.95	0.89	0.96	0.94	0.98	0.052232	0.486928	-
Rv2396	PE_PGRS41	12	237.1	231.3	241.2	206.4	220.5	201.3	-0.025	-0.060	0.000	-0.220	-0.127	-0.255	328.2	396.4	304.7	256.2	294.0	241.6	0.72	0.58	0.79	0.81	0.75	0.83	0.652261	1.000000	-
Rv2397c	cysA1	12	75.5	49.1	88.6	121.3	94.7	36.7	-0.218	-0.791	0.000	0.433	0.091	-1.166	79.9	53.5	111.9	121.3	108.2	44.1	0.94	0.92	0.79	1.00	0.88	0.83	0.000036	0.001006	-
Rv2398c	cysW	16	40.9	26.9	58.8	59.6	46.3	24.6	-0.477	-1.000	0.000	0.018	-0.315	-1.106	67.6	34.4	78.4	98.7	70.6	39.4	0.60	0.78	0.75	0.60	0.66	0.62	0.000650	0.013721	-
Rv2399c	cysT	10	65.0	40.7	55.6	81.5	82.5	41.5	0.208	-0.409	0.000	0.513	0.529	-0.383	102.7	62.5	92.7	122.3	103.1	51.9	0.63	0.65	0.60	0.67	0.80	0.80	0.294198	1.000000	-
Rv2400c	subI	17	68.0	50.2	66.8	105.8	95.4	39.9	0.023	-0.380	0.000	0.625	0.484	-0.679	86.7	63.2	81.2	122.6	111.9	52.1	0.78	0.79	0.82	0.86	0.85	0.76	0.003149	0.054153	-
Rv2401	-	3	171.1	156.4	140.5	196.1	205.9	182.8	0.276	0.150	0.000	0.467	0.536	0.368	171.1	156.4	140.5	294.1	247.1	182.8	1.00	1.00	1.00	0.67	0.83	1.00	0.227104	1.000000	-
Rv2401A	-	1	5.5	0.0	0.0	0.0	9.0	0.0	1.066	0.000	0.000	0.000	1.485	0.000	16.4	0.0	0.0	0.0	18.0	0.0	0.33	0.00	0.00	0.00	0.50	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2402	-	26	177.5	170.5	182.1	190.8	185.4	168.3	-0.035	-0.092	0.000	0.065	0.025	-0.111	182.2	170.5	185.6	198.4	185.4	175.0	0.97	1.00	0.98	0.96	1.00	0.96	0.666694	1.000000	-
Rv2403c	lppR	7	20.5	37.1	33.4	38.1	35.5	30.5	-0.592	0.132	0.000	0.167	0.075	-0.115	39.1	51.9	52.0	47.1	49.6	35.6	0.52	0.71	0.64	0.81	0.71	0.86	0.608360	1.000000	-
Rv2404c	lepA	27	235.8	179.1	208.5	162.9	144.4	192.4	0.174	-0.214	0.000	-0.347	-0.515	-0.113	261.7	189.6	216.5	175.9	159.2	207.8	0.90	0.94	0.96	0.93	0.91	0.93	0.463617	1.000000	-
Rv2405	-	8	177.3	183.3	138.2	155.4	139.8	123.7	0.348	0.395	0.000	0.163	0.016	-0.154	177.3	183.3	138.2	155.4	139.8	123.7	1.00	1.00	1.00	1.00	1.00	1.00	0.626321	1.000000	-
Rv2406c	-	7	189.6	192.3	183.9	198.7	175.4	162.6	0.043	0.063	0.000	0.109	-0.067	-0.172	189.6	192.3	198.1	198.7	175.4	162.6	1.00	1.00	0.93	1.00	1.00	1.00	0.929096	1.000000	-
Rv2407	-	9	212.4	181.5	189.7	187.4	203.8	185.4	0.159	-0.062	0.000	-0.017	0.100	-0.032	318.5	233.4	262.7	266.4	282.1	208.6	0.67	0.78	0.72	0.70	0.72	0.89	0.964867	1.000000	-
Rv2408	PE24	12	103.3	125.1	95.6	115.0	121.6	115.0	0.107	0.372	0.000	0.255	0.331	0.254	103.3	125.1	99.7	118.3	121.6	125.4	1.00	1.00	0.96	0.97	1.00	0.92	0.244793	1.000000	-
Rv2409c	-	18	105.6	110.3	106.9	144.7	116.1	123.1	-0.017	0.043	0.000	0.420	0.113	0.195	105.6	120.4	106.9	144.7	119.4	126.6	1.00	0.92	1.00	1.00	0.97	0.97	0.019490	0.230754	-
Rv2410c	-	9	121.6	123.2	105.7	161.3	122.5	105.8	0.194	0.212	0.000	0.588	0.204	0.002	172.8	158.4	135.8	197.9	157.5	136.1	0.70	0.78	0.78	0.81	0.78	0.78	0.971074	1.000000	-
Rv2411c	-	22	187.1	170.0	161.0	192.4	213.1	174.3	0.210	0.076	0.000	0.250	0.394	0.111	202.4	170.0	177.1	192.4	218.1	174.3	0.92	1.00	0.91	1.00	0.98	1.00	0.081003	0.662300	-
Rv2412	rpsT	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2413c	-	13	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2414c	-	9	115.2	78.8	107.6	133.2	77.7	89.1	0.095	-0.425	0.000	0.296	-0.445	-0.259	141.4	88.7	113.9	149.9	82.2	100.2	0.81	0.89	0.94	0.89	0.94	0.89	0.543206	1.000000	-
Rv2415c	-	14	111.2	105.2	127.2	129.1	122.9	95.7	-0.187	-0.262	0.000	0.021	-0.048	-0.393	119.7	113.3	154.9	139.1	132.3	103.0	0.93	0.93	0.82	0.93	0.93	0.93	0.783883	1.000000	-
Rv2416c	eis	26	94.4	86.7	105.5	99.2	88.8	80.3	-0.153	-0.269	0.000	-0.085	-0.237	-0.374	129.2	140.9	144.4	133.4	124.8	116.0	0.73	0.62	0.73	0.74	0.71	0.69	0.763254	1.000000	-
Rv2417c	-	10	144.7	120.1	145.3	155.3	112.7	123.0	-0.006	-0.265	0.000	0.093	-0.352	-0.232	149.7	120.1	171.0	155.3	150.3	123.0	0.97	1.00	0.85	1.00	0.75	1.00	0.032411	0.345775	-
Rv2418c	-	20	8.7	24.9	8.5	26.4	25.1	12.3	0.025	1.150	0.000	1.224	1.162	0.364	32.6	43.3	26.0	42.9	41.9	29.0	0.27	0.57	0.33	0.62	0.60	0.42	0.001527	0.028745	-
Rv2419c	-	7	89.7	110.5	121.1	163.7	136.3	121.2	-0.413	-0.126	0.000	0.420	0.165	0.001	104.7	154.8	130.4	191.0	159.1	141.4	0.86	0.71	0.93	0.86	0.86	0.86	0.429287	1.000000	-
Rv2420c	-	4	14.0	16.6	14.8	20.0	17.6	21.2	-0.055	0.128	0.000	0.339	0.194	0.409	28.1	22.1	29.5	34.3	35.2	24.3	0.50	0.75	0.50	0.58	0.50	0.88	0.662259	1.000000	-
Rv2421c	nadD	12	0.0	0.0	0.0	0.0	0.4	0.0	0.000	0.000	0.000	0.000	0.104	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2422	-	4	79.6	130.0	112.5	105.0	96.7	131.6	-0.475	0.200	0.000	-0.096	-0.208	0.217	79.6	130.0	112.5	105.0	96.7	131.6	1.00	1.00	1.00	1.00	1.00	1.00	0.450182	1.000000	-
Rv2423	-	17	229.9	248.1	218.6	212.7	223.4	243.1	0.071	0.179	0.000	-0.038	0.031	0.150	234.5	263.6	239.7	226.0	223.4	258.3	0.98	0.94	0.91	0.94	1.00	0.94	0.697505	1.000000	-
Rv2424c	-	7	209.5	174.4	203.1	212.0	185.2	182.4	0.044	-0.214	0.000	0.060	-0.130	-0.151	258.8	203.5	258.5	261.9	216.1	212.8	0.81	0.86	0.79	0.81	0.86	0.86	0.999824	1.000000	-
Rv2425c	-	16	152.6	137.2	128.8	140.3	142.1	122.2	0.235	0.088	0.000	0.118	0.137	-0.073	159.2	137.2	137.4	153.0	146.7	126.2	0.96	1.00	0.94	0.92	0.97	0.97	0.843126	1.000000	-
Rv2426c	-	10	208.3	216.7	182.0	162.8	151.1	158.3	0.190	0.246	0.000	-0.156	-0.260	-0.196	231.4	240.8	202.2	187.9	167.9	158.3	0.90	0.90	0.90	0.87	0.90	1.00	0.686034	1.000000	-
Rv2427c	proA	15	266.1	239.8	238.5	220.9	165.3	201.9	0.155	0.008	0.000	-0.108	-0.516	-0.235	323.7	266.5	265.0	276.1	198.3	242.3	0.82	0.90	0.90	0.80	0.83	0.83	0.885001	1.000000	-
Rv2428	ahpC	8	52.3	80.7	47.9	64.8	49.5	50.4	0.113	0.695	0.000	0.399	0.042	0.067	89.6	117.4	76.7	81.8	60.9	67.3	0.58	0.69	0.62	0.79	0.81	0.75	0.795103	1.000000	-
Rv2429	ahpD	10	81.8	111.9	62.5	96.1	85.3	109.5	0.364	0.793	0.000	0.584	0.421	0.764	94.4	111.9	69.4	99.4	85.3	109.5	0.87	1.00	0.90	0.97	1.00	1.00	0.075058	0.623916	-
Rv2430c	PPE41	8	124.4	116.1	101.1	176.9	155.6	153.8	0.287	0.191	0.000	0.778	0.598	0.582	135.8	116.1	101.1	176.9	155.6	153.8	0.92	1.00	1.00	1.00	1.00	1.00	0.161706	0.985656	-
Rv2431c	PE25	5	91.4	88.8	94.3	100.1	89.8	84.8	-0.043	-0.081	0.000	0.082	-0.066	-0.144	91.4	88.8	94.3	100.1	89.8	84.8	1.00	1.00	1.00	1.00	1.00	1.00	0.995970	1.000000	-
Rv2432c	-	7	93.5	90.2	132.1	130.1	139.7	119.0	-0.478	-0.526	0.000	-0.022	0.078	-0.145	98.1	126.3	154.2	130.1	150.5	138.8	0.95	0.71	0.86	1.00	0.93	0.86	0.130868	0.868824	-
Rv2433c	-	6	184.2	132.3	147.9	137.2	124.9	129.2	0.307	-0.156	0.000	-0.105	-0.236	-0.189	221.0	176.4	177.5	176.4	149.9	140.9	0.83	0.75	0.83	0.78	0.83	0.92	0.989344	1.000000	-
Rv2434c	-	23	47.9	56.2	53.7	59.2	45.3	56.5	-0.149	0.060	0.000	0.130	-0.223	0.068	75.1	86.1	77.1	99.6	71.8	74.2	0.64	0.65	0.70	0.59	0.63	0.76	0.481983	1.000000	-
Rv2435c	-	50	39.9	47.3	53.3	54.1	49.8	55.2	-0.377	-0.157	0.000	0.021	-0.088	0.048	63.0	62.2	74.0	76.6	70.2	73.7	0.63	0.76	0.72	0.71	0.71	0.75	0.382136	1.000000	-
Rv2436	rbsK	11	129.6	126.1	108.6	107.4	118.4	98.1	0.245	0.206	0.000	-0.015	0.119	-0.140	164.6	173.3	170.7	197.0	153.2	119.9	0.79	0.73	0.64	0.55	0.77	0.82	0.469634	1.000000	-
Rv2437	-	9	41.9	42.6	52.1	36.9	42.1	39.7	-0.285	-0.263	0.000	-0.446	-0.278	-0.354	56.5	51.1	72.2	45.3	58.3	44.6	0.74	0.83	0.72	0.81	0.72	0.89	0.798918	1.000000	-
Rv2438c	nadE	35	0.0	0.0	0.0	0.0	0.2	0.0	0.000	0.000	0.000	0.000	0.059	0.000	0.0	0.0	0.0	0.0	14.5	0.0	0.00	0.00	0.00	0.00	0.01	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2438A	-	5	26.7	62.8	50.1	55.6	27.4	36.0	-0.799	0.298	0.000	0.135	-0.765	-0.429	66.7	156.9	125.3	138.9	68.6	89.9	0.40	0.40	0.40	0.40	0.40	0.40	0.111120	0.784724	-
Rv2439c	proB	11	1.6	2.3	0.6	1.7	0.0	7.4	0.234	0.388	0.000	0.257	-0.156	1.153	17.1	10.1	12.6	13.7	0.0	18.1	0.09	0.23	0.05	0.12	0.00	0.41	0.008548	0.123127	-
Rv2440c	obgE	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2441c	rpmA	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2442c	rplU	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2443	dctA	19	206.8	215.1	191.1	213.7	211.9	219.0	0.111	0.166	0.000	0.157	0.145	0.192	214.3	227.0	191.1	213.7	211.9	219.0	0.96	0.95	1.00	1.00	1.00	1.00	0.477518	1.000000	-
Rv2444c	rne	28	2.0	4.7	1.9	5.7	4.5	2.3	0.022	0.491	0.000	0.633	0.457	0.072	24.1	29.3	21.3	43.6	25.1	21.1	0.08	0.16	0.09	0.13	0.18	0.11	0.339454	1.000000	-
Rv2445c	ndk	3	2.6	3.4	14.5	1.6	2.4	1.6	-1.363	-1.216	0.000	-1.554	-1.396	-1.571	23.3	10.2	43.5	14.8	14.5	9.4	0.11	0.33	0.33	0.11	0.17	0.17	0.076416	0.632052	-
Rv2446c	-	6	118.2	116.3	103.0	141.7	145.8	120.5	0.189	0.167	0.000	0.441	0.481	0.216	118.2	116.3	112.4	141.7	145.8	120.5	1.00	1.00	0.92	1.00	1.00	1.00	0.752273	1.000000	-
Rv2447c	folC	13	0.0	0.4	0.5	0.0	0.0	0.0	-0.133	-0.027	0.000	-0.133	-0.133	-0.133	0.0	10.0	12.6	0.0	0.0	0.0	0.00	0.04	0.04	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2448c	valS	24	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2449c	-	23	242.5	242.5	239.1	238.7	218.3	237.7	0.020	0.020	0.000	-0.003	-0.128	-0.008	246.0	253.5	249.9	249.5	228.2	237.7	0.99	0.96	0.96	0.96	0.96	1.00	0.872527	1.000000	-
Rv2450c	rpfE	7	141.5	119.6	151.1	117.5	117.3	136.3	-0.091	-0.326	0.000	-0.350	-0.352	-0.144	198.2	167.4	192.4	164.5	149.3	159.1	0.71	0.71	0.79	0.71	0.79	0.86	0.998683	1.000000	-
Rv2451	-	8	76.3	105.2	85.5	110.3	116.8	97.2	-0.156	0.283	0.000	0.349	0.428	0.175	114.4	153.0	105.3	126.0	133.5	111.1	0.67	0.69	0.81	0.88	0.88	0.88	0.687518	1.000000	-
Rv2452c	-	7	75.7	73.4	79.5	63.2	73.5	57.3	-0.068	-0.109	0.000	-0.310	-0.108	-0.441	132.4	102.7	139.2	88.5	102.8	72.9	0.57	0.71	0.57	0.71	0.71	0.79	0.841654	1.000000	-
Rv2453c	mobA	5	301.5	336.1	308.4	293.4	307.4	281.9	-0.032	0.123	0.000	-0.070	-0.005	-0.127	301.5	336.1	308.4	293.4	307.4	281.9	1.00	1.00	1.00	1.00	1.00	1.00	0.992071	1.000000	-
Rv2454c	-	15	9.1	23.0	4.4	37.8	67.4	16.3	0.585	1.577	0.000	2.188	2.945	1.184	25.6	38.4	22.0	50.1	80.8	28.8	0.36	0.60	0.20	0.76	0.83	0.57	0.000000	0.000000	-
Rv2455c	-	37	11.7	17.0	6.4	39.3	60.1	13.9	0.559	0.954	0.000	1.965	2.520	0.739	25.0	25.7	21.4	48.5	67.4	22.9	0.47	0.66	0.30	0.81	0.89	0.61	0.000000	0.000000	-
Rv2456c	-	20	240.2	248.7	215.3	242.2	238.5	198.2	0.154	0.203	0.000	0.166	0.144	-0.116	257.4	268.8	239.3	254.9	251.0	220.3	0.93	0.93	0.90	0.95	0.95	0.90	0.983576	1.000000	-
Rv2457c	clpX	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2458	mmuM	16	411.3	429.6	424.8	409.7	400.2	418.9	-0.046	0.016	0.000	-0.052	-0.085	-0.020	411.3	458.2	453.2	437.0	426.8	446.8	1.00	0.94	0.94	0.94	0.94	0.94	0.606687	1.000000	-
Rv2459	-	20	175.6	190.3	181.5	152.5	171.4	206.3	-0.046	0.067	0.000	-0.243	-0.080	0.180	188.2	200.3	201.6	160.6	185.3	217.1	0.93	0.95	0.90	0.95	0.93	0.95	0.878621	1.000000	-
Rv2460c	clpP2	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2461c	clpP	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2462c	tig	18	211.2	196.4	195.4	232.1	228.3	214.9	0.110	0.008	0.000	0.243	0.220	0.134	211.2	202.0	206.9	245.7	234.9	214.9	1.00	0.97	0.94	0.94	0.97	1.00	0.600493	1.000000	-
Rv2463	lipP	17	96.0	99.3	104.3	90.2	99.3	113.7	-0.114	-0.067	0.000	-0.199	-0.067	0.119	106.4	105.5	110.8	102.2	112.6	120.8	0.90	0.94	0.94	0.88	0.88	0.94	0.940698	1.000000	-
Rv2464c	-	10	221.6	191.8	196.2	192.5	237.5	249.9	0.172	-0.032	0.000	-0.027	0.269	0.341	246.2	201.9	196.2	199.1	237.5	249.9	0.90	0.95	1.00	0.97	1.00	1.00	0.606615	1.000000	-
Rv2465c	-	6	0.0	0.8	0.0	0.0	0.0	0.0	0.000	0.222	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.08	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2466c	-	9	70.0	80.1	64.9	82.7	54.3	80.7	0.102	0.284	0.000	0.329	-0.237	0.296	85.9	90.1	73.0	85.9	65.1	90.8	0.81	0.89	0.89	0.96	0.83	0.89	0.852275	1.000000	-
Rv2467	pepN	35	161.3	174.2	162.5	173.3	183.3	147.4	-0.011	0.098	0.000	0.090	0.169	-0.136	167.6	179.4	167.3	180.1	186.0	147.4	0.96	0.97	0.97	0.96	0.99	1.00	0.513322	1.000000	-
Rv2468c	-	5	196.4	162.0	234.2	174.5	185.1	199.8	-0.248	-0.518	0.000	-0.414	-0.331	-0.224	196.4	180.0	234.2	174.5	185.1	199.8	1.00	0.90	1.00	1.00	1.00	1.00	0.856131	1.000000	-
Rv2469c	-	8	244.1	186.3	214.5	163.2	157.4	174.3	0.183	-0.198	0.000	-0.384	-0.435	-0.292	244.1	186.3	214.5	170.3	157.4	174.3	1.00	1.00	1.00	0.96	1.00	1.00	0.726444	1.000000	-
Rv2470	glbO	8	75.3	36.2	100.1	161.7	174.4	39.9	-0.388	-1.350	0.000	0.665	0.771	-1.227	78.6	36.2	106.8	161.7	174.4	39.9	0.96	1.00	0.94	1.00	1.00	1.00	0.000000	0.000000	-
Rv2471	aglA	16	147.3	155.3	154.0	168.3	159.7	176.3	-0.063	0.011	0.000	0.124	0.051	0.189	164.4	171.3	170.0	192.4	170.4	188.1	0.90	0.91	0.91	0.88	0.94	0.94	0.974083	1.000000	-
Rv2472	-	7	56.3	64.2	46.4	37.6	42.8	52.5	0.255	0.429	0.000	-0.269	-0.104	0.162	69.5	74.9	64.9	52.7	49.9	66.8	0.81	0.86	0.71	0.71	0.86	0.79	0.888418	1.000000	-
Rv2473	-	15	168.9	186.7	166.2	167.4	168.7	149.9	0.023	0.163	0.000	0.010	0.021	-0.144	194.9	215.5	191.8	193.1	187.4	173.0	0.87	0.87	0.87	0.87	0.90	0.87	0.995860	1.000000	-
Rv2474c	-	13	69.1	75.3	79.9	90.6	71.0	65.0	-0.196	-0.080	0.000	0.172	-0.160	-0.278	99.8	93.3	109.3	117.8	87.9	65.0	0.69	0.81	0.73	0.77	0.81	1.00	0.043764	0.434629	-
Rv2475c	-	8	19.7	20.5	18.3	20.1	29.7	27.7	0.083	0.130	0.000	0.102	0.571	0.485	29.6	29.9	26.7	34.4	43.2	31.6	0.67	0.69	0.69	0.58	0.69	0.88	0.484206	1.000000	-
Rv2476c	gdh	56	19.0	45.1	14.8	43.5	61.0	34.3	0.281	1.342	0.000	1.296	1.738	0.990	39.0	53.8	39.4	59.5	73.4	43.1	0.49	0.84	0.38	0.73	0.83	0.79	0.000000	0.000000	-
Rv2477c	-	23	0.7	2.4	0.3	2.3	1.9	2.9	0.121	0.494	0.000	0.462	0.393	0.589	16.9	12.4	12.6	14.2	12.6	12.3	0.04	0.20	0.02	0.16	0.15	0.24	0.047224	0.456227	-
Rv2478c	-	5	388.9	346.1	336.0	330.1	304.7	346.8	0.208	0.042	0.000	-0.025	-0.139	0.045	388.9	346.1	336.0	330.1	304.7	346.8	1.00	1.00	1.00	1.00	1.00	1.00	0.992914	1.000000	-
Rv2479c	-	24	261.9	276.6	299.1	291.6	263.8	288.1	-0.188	-0.111	0.000	-0.036	-0.178	-0.053	325.2	316.1	368.2	355.8	316.5	321.6	0.81	0.88	0.81	0.82	0.83	0.90	0.990003	1.000000	-
Rv2480c	-	4	199.3	231.8	243.3	247.7	224.1	177.5	-0.281	-0.068	0.000	0.026	-0.116	-0.444	199.3	231.8	243.3	247.7	224.1	177.5	1.00	1.00	1.00	1.00	1.00	1.00	0.930955	1.000000	-
Rv2481c	-	2	138.1	100.3	146.8	123.7	136.7	83.4	-0.085	-0.528	0.000	-0.238	-0.100	-0.780	138.1	100.3	146.8	123.7	136.7	83.4	1.00	1.00	1.00	1.00	1.00	1.00	0.395738	1.000000	-
Rv2482c	plsB2	38	120.8	104.2	118.9	120.5	107.3	104.4	0.023	-0.182	0.000	0.019	-0.141	-0.179	151.4	118.2	139.0	157.9	127.5	115.0	0.80	0.88	0.86	0.76	0.84	0.91	0.210680	1.000000	-
Rv2483c	plsC	23	41.0	48.0	53.7	30.8	55.0	44.3	-0.354	-0.148	0.000	-0.714	0.032	-0.254	54.4	52.6	70.6	39.4	58.9	48.5	0.75	0.91	0.76	0.78	0.93	0.91	0.007129	0.105354	-
Rv2484c	-	20	87.7	103.3	90.5	109.7	106.9	105.8	-0.043	0.182	0.000	0.265	0.228	0.215	107.4	111.7	100.5	119.7	118.7	105.8	0.82	0.93	0.90	0.92	0.90	1.00	0.242133	1.000000	-
Rv2485c	lipQ	19	194.5	204.8	228.4	201.7	212.3	201.4	-0.226	-0.154	0.000	-0.176	-0.103	-0.177	201.6	204.8	241.1	205.3	212.3	201.4	0.96	1.00	0.95	0.98	1.00	1.00	0.737642	1.000000	-
Rv2486	echA14	9	460.1	508.1	510.4	506.4	469.6	449.8	-0.148	-0.007	0.000	-0.011	-0.119	-0.180	460.1	508.1	510.4	525.9	469.6	449.8	1.00	1.00	1.00	0.96	1.00	1.00	0.910591	1.000000	-
Rv2487c	PE_PGRS42	21	131.5	130.0	140.1	144.8	124.8	111.0	-0.088	-0.104	0.000	0.046	-0.160	-0.323	156.3	151.6	154.8	168.9	163.9	137.1	0.84	0.86	0.90	0.86	0.76	0.81	0.730744	1.000000	-
Rv2488c	-	38	231.2	201.1	218.2	210.5	194.6	199.0	0.081	-0.115	0.000	-0.051	-0.162	-0.130	263.5	218.4	247.6	237.6	224.1	229.2	0.88	0.92	0.88	0.89	0.87	0.87	0.986053	1.000000	-
Rv2489c	-	4	162.8	142.5	116.7	138.8	155.4	193.0	0.463	0.277	0.000	0.240	0.398	0.702	162.8	142.5	133.4	138.8	155.4	193.0	1.00	1.00	0.88	1.00	1.00	1.00	0.935840	1.000000	-
Rv2490c	PE_PGRS43	45	193.5	164.8	189.4	171.7	153.3	138.5	0.030	-0.195	0.000	-0.137	-0.297	-0.437	241.9	192.6	227.3	216.7	179.1	166.3	0.80	0.86	0.83	0.79	0.86	0.83	0.726901	1.000000	-
Rv2491	-	14	53.6	42.7	30.4	46.9	30.2	29.9	0.729	0.432	0.000	0.553	-0.005	-0.019	97.9	70.3	56.7	67.9	56.4	44.0	0.55	0.61	0.54	0.69	0.54	0.68	0.261075	1.000000	-
Rv2492	-	26	22.2	29.5	28.9	35.2	29.5	28.9	-0.315	0.028	0.000	0.249	0.026	0.002	44.4	49.5	53.6	62.5	47.9	55.7	0.50	0.60	0.54	0.56	0.62	0.52	0.848890	1.000000	-
Rv2493	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2494	-	5	136.2	152.5	212.6	186.4	170.2	162.5	-0.624	-0.466	0.000	-0.186	-0.313	-0.378	170.3	190.6	212.6	186.4	189.1	203.1	0.80	0.80	1.00	1.00	0.90	0.80	0.492305	1.000000	-
Rv2495c	pdhC	14	74.7	52.2	65.9	78.2	51.3	45.0	0.169	-0.309	0.000	0.231	-0.333	-0.505	87.2	77.0	83.9	88.8	65.3	57.2	0.86	0.68	0.79	0.88	0.79	0.79	0.324129	1.000000	-
Rv2496c	pdhB	22	34.0	34.6	31.5	37.7	41.6	27.9	0.092	0.117	0.000	0.223	0.351	-0.152	62.3	54.4	57.8	69.0	52.3	37.2	0.55	0.64	0.55	0.55	0.80	0.75	0.050018	0.471800	-
Rv2497c	pdhA	22	87.4	81.7	76.4	95.0	84.0	71.0	0.183	0.092	0.000	0.298	0.129	-0.098	110.9	105.8	98.8	112.0	102.7	89.3	0.79	0.77	0.77	0.85	0.82	0.80	0.981130	1.000000	-
Rv2498c	citE	9	126.9	129.6	163.7	144.6	132.6	95.9	-0.354	-0.325	0.000	-0.173	-0.293	-0.741	149.0	137.3	196.4	150.1	132.6	95.9	0.85	0.94	0.83	0.96	1.00	1.00	0.282826	1.000000	-
Rv2499c	-	5	19.9	36.8	33.1	44.9	38.8	61.9	-0.616	0.130	0.000	0.387	0.200	0.810	33.1	45.9	55.2	56.1	38.8	88.4	0.60	0.80	0.60	0.80	1.00	0.70	0.006037	0.092283	-
Rv2500c	fadE19	23	71.5	53.9	50.8	57.5	64.1	65.6	0.454	0.078	0.000	0.163	0.307	0.338	98.7	77.5	86.6	82.7	89.3	94.3	0.72	0.70	0.59	0.70	0.72	0.70	0.945405	1.000000	-
Rv2501c	accA1	21	116.0	109.1	135.0	107.8	118.9	98.3	-0.210	-0.295	0.000	-0.311	-0.176	-0.437	137.9	130.9	161.9	135.8	131.4	129.1	0.84	0.83	0.83	0.79	0.90	0.76	0.876574	1.000000	-
Rv2502c	accD1	25	117.2	100.6	120.8	121.1	118.1	88.2	-0.042	-0.252	0.000	0.004	-0.031	-0.432	144.1	119.8	147.3	128.0	131.3	100.3	0.81	0.84	0.82	0.95	0.90	0.88	0.377421	1.000000	-
Rv2503c	scoB	7	63.1	75.5	84.2	106.7	86.1	77.2	-0.390	-0.148	0.000	0.324	0.030	-0.118	77.9	88.1	117.9	124.5	100.4	90.0	0.81	0.86	0.71	0.86	0.86	0.86	0.824232	1.000000	-
Rv2504c	scoA	12	59.8	53.5	56.9	62.0	62.3	62.5	0.066	-0.080	0.000	0.115	0.121	0.125	107.6	80.3	105.0	101.4	99.7	83.3	0.56	0.67	0.54	0.61	0.62	0.75	0.987411	1.000000	-
Rv2505c	fadD35	32	130.2	129.3	121.0	123.3	131.5	119.3	0.101	0.093	0.000	0.026	0.116	-0.020	140.4	140.3	133.5	128.7	133.6	131.6	0.93	0.92	0.91	0.96	0.98	0.91	0.751500	1.000000	-
Rv2506	-	7	307.0	235.8	338.2	210.0	120.0	205.7	-0.137	-0.511	0.000	-0.675	-1.457	-0.704	307.0	235.8	338.2	210.0	120.0	205.7	1.00	1.00	1.00	1.00	1.00	1.00	0.016456	0.203277	-
Rv2507	-	18	5.2	23.2	4.5	28.0	46.0	10.2	0.098	1.564	0.000	1.793	2.420	0.678	23.4	34.7	27.1	35.2	66.2	21.7	0.22	0.67	0.17	0.80	0.69	0.47	0.000000	0.000000	-
Rv2508c	-	15	97.5	131.5	139.6	125.8	120.0	92.4	-0.497	-0.084	0.000	-0.145	-0.210	-0.570	104.4	136.0	139.6	125.8	128.6	92.4	0.93	0.97	1.00	1.00	0.93	1.00	0.089819	0.697233	-
Rv2509	-	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2510c	-	15	137.9	100.5	132.8	132.0	143.9	100.4	0.052	-0.385	0.000	-0.009	0.111	-0.387	182.5	150.8	181.2	165.0	179.8	136.9	0.76	0.67	0.73	0.80	0.80	0.73	0.957788	1.000000	-
Rv2511	orn	8	13.0	26.6	11.3	29.4	37.5	25.3	0.139	0.953	0.000	1.077	1.379	0.893	34.6	28.4	30.2	35.3	42.8	27.0	0.38	0.94	0.38	0.83	0.88	0.94	0.000039	0.001076	-
Rv2512c	-	15	247.1	254.4	271.1	272.2	263.3	253.1	-0.131	-0.090	0.000	0.006	-0.041	-0.097	252.7	272.6	290.4	272.2	263.3	253.1	0.98	0.93	0.93	1.00	1.00	1.00	0.612998	1.000000	-
Rv2513	-	8	48.7	50.2	53.9	59.5	58.9	56.3	-0.135	-0.093	0.000	0.132	0.117	0.057	58.4	57.4	66.4	71.5	67.3	64.3	0.83	0.88	0.81	0.83	0.88	0.88	0.974303	1.000000	-
Rv2514c	-	5	73.2	79.6	70.8	85.2	84.1	91.7	0.046	0.159	0.000	0.251	0.233	0.352	91.5	113.7	88.5	141.9	120.1	114.6	0.80	0.70	0.80	0.60	0.70	0.80	0.522678	1.000000	-
Rv2515c	-	20	63.1	65.8	66.7	65.2	63.6	65.4	-0.074	-0.017	0.000	-0.029	-0.063	-0.026	78.9	90.8	92.0	85.1	79.5	77.0	0.80	0.72	0.72	0.77	0.80	0.85	0.936483	1.000000	-
Rv2516c	-	13	18.2	23.2	20.2	19.3	22.8	15.6	-0.118	0.160	0.000	-0.056	0.143	-0.292	71.1	100.4	87.6	83.4	84.8	67.5	0.26	0.23	0.23	0.23	0.27	0.23	0.995711	1.000000	-
Rv2517c	-	7	159.2	162.6	151.3	211.3	217.2	159.5	0.071	0.100	0.000	0.468	0.507	0.074	159.2	162.6	162.9	211.3	217.2	159.5	1.00	1.00	0.93	1.00	1.00	1.00	0.562408	1.000000	-
Rv2518c	lppS	18	40.6	52.7	38.8	46.6	67.1	46.5	0.056	0.395	0.000	0.236	0.717	0.232	52.2	55.8	60.8	56.0	71.0	49.2	0.78	0.94	0.64	0.83	0.94	0.94	0.012412	0.163445	-
Rv2519	PE26	30	98.7	88.0	82.8	93.0	85.3	87.4	0.241	0.083	0.000	0.160	0.041	0.075	125.2	110.0	115.5	119.6	104.4	100.9	0.79	0.80	0.72	0.78	0.82	0.87	0.968219	1.000000	-
Rv2520c	-	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2521	bcp	9	76.5	65.0	63.0	60.5	72.8	73.9	0.262	0.044	0.000	-0.052	0.195	0.215	137.7	117.1	141.6	116.8	100.8	110.8	0.56	0.56	0.44	0.52	0.72	0.67	0.975979	1.000000	-
Rv2522c	-	17	81.4	72.6	87.1	83.3	82.9	79.6	-0.093	-0.248	0.000	-0.061	-0.067	-0.123	106.4	85.1	102.1	101.1	100.7	90.2	0.76	0.85	0.85	0.82	0.82	0.88	0.987873	1.000000	-
Rv2523c	acpS	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2524c	fas	61	0.0	0.0	0.0	0.0	0.0	0.1	0.000	0.000	0.000	0.000	0.000	0.025	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.01	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2525c	-	12	198.6	230.6	224.9	214.3	194.8	207.1	-0.176	0.035	0.000	-0.069	-0.203	-0.116	198.6	230.6	224.9	214.3	194.8	207.1	1.00	1.00	1.00	1.00	1.00	1.00	0.939351	1.000000	-
Rv2526	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2527	-	9	155.3	122.0	147.6	138.1	159.2	150.1	0.071	-0.264	0.000	-0.092	0.106	0.023	161.3	137.3	166.0	155.4	179.1	168.8	0.96	0.89	0.89	0.89	0.89	0.89	0.933083	1.000000	-
Rv2528c	mrr	9	91.6	113.0	127.8	91.4	141.5	143.5	-0.460	-0.171	0.000	-0.463	0.141	0.161	123.6	169.4	153.4	112.1	181.9	215.2	0.74	0.67	0.83	0.81	0.78	0.67	0.267208	1.000000	-
Rv2529	-	16	104.7	81.3	102.5	82.1	89.5	85.8	0.030	-0.316	0.000	-0.304	-0.185	-0.243	139.7	96.4	126.1	89.5	89.5	98.0	0.75	0.84	0.81	0.92	1.00	0.88	0.022940	0.263498	-
Rv2530c	-	3	31.3	34.1	44.9	41.3	41.8	52.5	-0.461	-0.354	0.000	-0.110	-0.093	0.203	93.8	68.1	134.8	123.8	125.4	157.4	0.33	0.50	0.33	0.33	0.33	0.33	0.365680	1.000000	-
Rv2530A	-	4	53.2	80.9	89.0	82.7	95.7	105.5	-0.693	-0.130	0.000	-0.101	0.099	0.233	58.0	92.5	101.8	82.7	95.7	105.5	0.92	0.88	0.88	1.00	1.00	1.00	0.541424	1.000000	-
Rv2531c	-	47	90.7	101.7	108.3	101.2	107.3	113.7	-0.243	-0.086	0.000	-0.093	-0.013	0.068	114.2	118.1	133.9	118.0	126.1	135.3	0.79	0.86	0.81	0.86	0.85	0.84	0.772577	1.000000	-
Rv2532c	-	5	141.6	153.7	180.4	121.7	136.6	122.2	-0.339	-0.224	0.000	-0.549	-0.389	-0.543	141.6	153.7	180.4	121.7	136.6	152.8	1.00	1.00	1.00	1.00	1.00	0.80	0.334742	1.000000	-
Rv2533c	nusB	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2534c	efp	9	0.9	0.0	0.0	0.0	0.0	0.6	0.229	0.000	0.000	0.000	0.000	0.164	11.6	0.0	0.0	0.0	0.0	10.8	0.07	0.00	0.00	0.00	0.00	0.06	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2535c	pepQ	19	114.2	143.1	92.3	169.9	150.1	137.7	0.293	0.606	0.000	0.846	0.672	0.552	127.6	159.9	106.3	176.1	162.9	149.5	0.89	0.89	0.87	0.96	0.92	0.92	0.141199	0.917561	-
Rv2536	-	8	102.8	131.2	128.9	175.0	140.5	166.7	-0.313	0.025	0.000	0.427	0.120	0.359	117.5	139.9	137.5	182.6	160.6	166.7	0.88	0.94	0.94	0.96	0.88	1.00	0.728816	1.000000	-
Rv2537c	aroD	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2538c	aroB	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2539c	aroK	5	0.0	0.0	0.0	0.0	0.0	5.3	0.000	0.000	0.000	0.000	0.000	1.038	0.0	0.0	0.0	0.0	0.0	17.6	0.00	0.00	0.00	0.00	0.00	0.30	0.043087	0.430867	-
Rv2540c	aroF	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2541	-	2	169.3	131.5	171.7	190.5	221.0	119.2	-0.020	-0.373	0.000	0.146	0.354	-0.509	169.3	131.5	171.7	190.5	221.0	119.2	1.00	1.00	1.00	1.00	1.00	1.00	0.718288	1.000000	-
Rv2542	-	11	163.8	198.1	219.3	177.3	177.4	170.1	-0.410	-0.143	0.000	-0.299	-0.298	-0.357	200.2	217.9	229.8	201.8	205.5	187.1	0.82	0.91	0.95	0.88	0.86	0.91	0.965658	1.000000	-
Rv2543	lppA	14	149.4	139.8	140.5	125.0	130.4	137.9	0.086	-0.007	0.000	-0.162	-0.104	-0.026	174.3	206.0	178.8	187.5	166.0	167.9	0.86	0.68	0.79	0.67	0.79	0.82	0.639071	1.000000	-
Rv2544	lppB	15	35.7	28.4	33.1	27.8	29.8	23.5	0.095	-0.190	0.000	-0.218	-0.131	-0.421	123.7	94.8	99.4	83.4	81.4	58.7	0.29	0.30	0.33	0.33	0.37	0.40	0.993069	1.000000	-
Rv2545	-	10	229.9	206.4	252.7	193.1	250.9	229.7	-0.134	-0.286	0.000	-0.380	-0.010	-0.135	229.9	217.3	252.7	214.5	250.9	229.7	1.00	0.95	1.00	0.90	1.00	1.00	0.375069	1.000000	-
Rv2546	-	9	249.2	327.8	245.6	256.2	249.7	259.4	0.021	0.409	0.000	0.060	0.024	0.078	258.8	368.7	260.0	288.2	281.0	274.7	0.96	0.89	0.94	0.89	0.89	0.94	0.837326	1.000000	-
Rv2547	-	2	215.0	237.6	223.6	268.7	262.5	283.0	-0.056	0.086	0.000	0.260	0.227	0.333	215.0	237.6	223.6	268.7	262.5	283.0	1.00	1.00	1.00	1.00	1.00	1.00	0.592966	1.000000	-
Rv2548	-	4	106.8	109.3	150.5	84.4	120.0	82.9	-0.476	-0.444	0.000	-0.799	-0.315	-0.824	160.2	218.7	200.7	144.7	160.0	82.9	0.67	0.50	0.75	0.58	0.75	1.00	0.274445	1.000000	-
Rv2549c	-	4	269.5	285.0	257.5	248.5	252.9	287.9	0.065	0.144	0.000	-0.050	-0.026	0.158	269.5	285.0	257.5	248.5	252.9	287.9	1.00	1.00	1.00	1.00	1.00	1.00	0.971917	1.000000	-
Rv2550c	-	5	71.3	75.6	72.5	79.8	74.2	78.6	-0.022	0.058	0.000	0.131	0.031	0.109	152.8	126.1	145.0	99.8	82.4	98.2	0.47	0.60	0.50	0.80	0.90	0.80	0.520743	1.000000	-
Rv2551c	-	2	258.0	373.9	339.2	292.5	290.6	174.8	-0.388	0.139	0.000	-0.210	-0.220	-0.937	387.0	373.9	339.2	585.0	581.2	349.6	0.67	1.00	1.00	0.50	0.50	0.50	0.449867	1.000000	-
Rv2552c	aroE	5	1.5	2.1	0.0	17.2	0.0	0.0	0.380	0.502	0.000	2.151	0.000	0.000	22.6	10.4	0.0	86.0	0.0	0.0	0.07	0.20	0.00	0.20	0.00	0.00	0.102301	0.747565	-
Rv2553c	-	16	63.9	95.3	64.7	63.4	101.3	68.5	-0.015	0.526	0.000	-0.026	0.609	0.077	71.4	113.0	76.6	72.5	111.8	75.6	0.90	0.84	0.84	0.88	0.91	0.91	0.006502	0.097905	-
Rv2554c	-	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2555c	alaS	39	0.0	0.0	0.0	0.1	0.0	0.0	0.000	0.000	0.000	0.035	0.000	0.000	0.0	0.0	0.0	14.4	0.0	0.0	0.00	0.00	0.00	0.01	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2556c	-	5	92.7	136.4	105.1	97.8	137.6	67.9	-0.171	0.361	0.000	-0.099	0.374	-0.595	139.1	151.6	131.3	133.4	152.9	84.9	0.67	0.90	0.80	0.73	0.90	0.80	0.913283	1.000000	-
Rv2557	-	9	185.8	186.6	185.9	163.3	168.9	146.5	-0.001	0.005	0.000	-0.182	-0.135	-0.334	185.8	186.6	185.9	163.3	168.9	146.5	1.00	1.00	1.00	1.00	1.00	1.00	0.818381	1.000000	-
Rv2558	-	4	352.6	364.7	337.8	336.1	296.1	373.4	0.061	0.109	0.000	-0.007	-0.187	0.143	352.6	364.7	337.8	336.1	296.1	373.4	1.00	1.00	1.00	1.00	1.00	1.00	0.992938	1.000000	-
Rv2559c	-	14	185.4	157.6	148.9	182.6	167.9	155.6	0.306	0.079	0.000	0.286	0.167	0.061	204.9	176.5	154.5	196.7	188.0	155.6	0.90	0.89	0.96	0.93	0.89	1.00	0.608299	1.000000	-
Rv2560	-	24	115.9	129.8	118.2	105.3	93.6	119.9	-0.027	0.130	0.000	-0.160	-0.321	0.020	141.5	138.5	141.8	122.3	104.5	130.8	0.82	0.94	0.83	0.86	0.90	0.92	0.784996	1.000000	-
Rv2561	-	3	232.4	384.8	302.0	298.9	250.8	321.8	-0.371	0.344	0.000	-0.015	-0.264	0.090	232.4	384.8	302.0	298.9	250.8	321.8	1.00	1.00	1.00	1.00	1.00	1.00	0.669550	1.000000	-
Rv2562	-	8	179.6	159.6	150.6	186.8	191.5	186.6	0.247	0.081	0.000	0.301	0.337	0.300	179.6	159.6	150.6	186.8	191.5	186.6	1.00	1.00	1.00	1.00	1.00	1.00	0.930814	1.000000	-
Rv2563	-	8	144.0	125.0	155.5	147.9	165.5	188.1	-0.107	-0.304	0.000	-0.070	0.087	0.267	164.5	125.0	155.5	169.0	165.5	188.1	0.88	1.00	1.00	0.88	1.00	1.00	0.245511	1.000000	-
Rv2564	glnQ	12	153.4	137.9	163.1	147.3	143.8	136.2	-0.086	-0.234	0.000	-0.142	-0.176	-0.251	162.4	150.4	163.1	147.3	143.8	148.6	0.94	0.92	1.00	1.00	1.00	0.92	0.556602	1.000000	-
Rv2565	-	22	94.2	75.3	95.7	82.2	78.8	81.0	-0.022	-0.326	0.000	-0.207	-0.266	-0.227	121.9	92.1	113.8	104.4	88.9	101.9	0.77	0.82	0.84	0.79	0.89	0.80	0.885123	1.000000	-
Rv2566	-	42	201.4	189.8	204.2	206.3	194.2	181.9	-0.020	-0.103	0.000	0.014	-0.071	-0.163	222.6	199.3	225.7	222.1	209.2	198.4	0.90	0.95	0.90	0.93	0.93	0.92	0.995659	1.000000	-
Rv2567	-	34	74.2	82.9	85.2	79.8	77.5	69.8	-0.189	-0.038	0.000	-0.090	-0.130	-0.270	90.0	110.5	96.6	104.3	94.0	76.6	0.82	0.75	0.88	0.76	0.82	0.91	0.045093	0.443940	-
Rv2568c	-	17	33.5	29.0	25.2	28.8	32.5	31.7	0.348	0.167	0.000	0.161	0.312	0.280	51.8	46.9	42.9	45.9	46.1	43.2	0.65	0.62	0.59	0.63	0.71	0.74	0.995405	1.000000	-
Rv2569c	-	22	34.3	48.3	47.2	38.1	47.9	44.4	-0.410	0.030	0.000	-0.277	0.018	-0.079	45.3	59.1	67.0	48.4	57.0	52.8	0.76	0.82	0.70	0.79	0.84	0.84	0.630636	1.000000	-
Rv2570	-	3	86.4	93.7	61.6	76.4	58.0	86.6	0.458	0.568	0.000	0.291	-0.079	0.461	86.4	112.4	73.9	86.0	87.1	86.6	1.00	0.83	0.83	0.89	0.67	1.00	0.657404	1.000000	-
Rv2571c	-	6	227.9	204.9	189.3	240.8	238.0	215.0	0.261	0.111	0.000	0.339	0.323	0.179	273.5	245.9	227.2	270.9	285.6	215.0	0.83	0.83	0.83	0.89	0.83	1.00	0.871417	1.000000	-
Rv2572c	aspS	19	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2573	-	3	430.0	346.1	362.8	337.2	415.2	260.8	0.242	-0.067	0.000	-0.104	0.192	-0.468	430.0	346.1	362.8	337.2	415.2	260.8	1.00	1.00	1.00	1.00	1.00	1.00	0.708754	1.000000	-
Rv2574	-	6	193.6	211.9	151.5	156.8	172.8	130.6	0.344	0.471	0.000	0.048	0.184	-0.206	205.0	211.9	151.5	156.8	172.8	130.6	0.94	1.00	1.00	1.00	1.00	1.00	0.892605	1.000000	-
Rv2575	-	17	98.3	97.3	99.3	81.4	96.8	79.7	-0.013	-0.028	0.000	-0.271	-0.035	-0.300	135.5	127.2	140.6	115.3	137.1	96.8	0.73	0.76	0.71	0.71	0.71	0.82	0.964842	1.000000	-
Rv2576c	-	10	177.0	172.8	143.2	169.2	177.7	158.5	0.297	0.263	0.000	0.233	0.302	0.142	177.0	192.0	150.7	175.0	177.7	176.1	1.00	0.90	0.95	0.97	1.00	0.90	0.643210	1.000000	-
Rv2577	-	36	89.7	97.9	91.7	90.3	89.4	77.6	-0.031	0.089	0.000	-0.022	-0.036	-0.228	106.4	119.5	112.0	102.7	107.3	96.3	0.84	0.82	0.82	0.88	0.83	0.81	0.780981	1.000000	-
Rv2578c	-	16	131.6	127.9	118.9	107.8	126.1	125.4	0.140	0.101	0.000	-0.136	0.081	0.073	146.9	136.4	140.9	117.6	134.5	138.4	0.90	0.94	0.84	0.92	0.94	0.91	0.971372	1.000000	-
Rv2579	dhaA	11	211.1	216.0	205.0	215.2	175.5	192.0	0.041	0.073	0.000	0.068	-0.219	-0.092	290.3	237.5	250.6	273.2	214.5	248.5	0.73	0.91	0.82	0.79	0.82	0.77	0.971484	1.000000	-
Rv2580c	hisS	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2581c	-	7	21.3	20.3	25.0	32.6	43.3	25.4	-0.190	-0.244	0.000	0.325	0.688	0.021	55.9	47.4	87.4	76.0	86.6	50.8	0.38	0.43	0.29	0.43	0.50	0.50	0.964523	1.000000	-
Rv2582	ppiB	17	1.2	3.0	0.0	3.8	7.4	2.1	0.315	0.678	0.000	0.821	1.309	0.498	15.6	17.0	0.0	39.1	25.1	23.4	0.08	0.18	0.00	0.10	0.29	0.09	0.017179	0.210263	-
Rv2583c	relA	33	23.6	42.7	21.5	19.5	16.6	32.8	0.113	0.851	0.000	-0.108	-0.292	0.515	42.5	65.6	42.9	43.0	33.2	54.1	0.56	0.65	0.50	0.45	0.50	0.61	0.001070	0.021389	-
Rv2584c	apt	10	165.2	171.0	186.5	174.7	158.6	163.4	-0.171	-0.122	0.000	-0.092	-0.227	-0.186	183.5	190.0	207.3	218.3	176.2	163.4	0.90	0.90	0.90	0.80	0.90	1.00	0.681694	1.000000	-
Rv2585c	-	24	148.5	149.9	136.1	163.4	166.8	149.0	0.121	0.134	0.000	0.255	0.284	0.126	164.5	167.3	155.6	178.3	174.1	166.4	0.90	0.90	0.88	0.92	0.96	0.90	0.958836	1.000000	-
Rv2586c	secF	17	48.3	68.6	53.2	100.3	96.0	59.3	-0.125	0.338	0.000	0.855	0.796	0.144	68.5	77.7	82.2	118.9	105.3	69.5	0.71	0.88	0.65	0.84	0.91	0.85	0.042146	0.422835	-
Rv2587c	secD	21	25.7	37.6	20.5	53.7	65.2	34.4	0.265	0.739	0.000	1.200	1.458	0.625	46.2	46.5	37.5	60.4	72.0	42.5	0.56	0.81	0.55	0.89	0.90	0.81	0.000000	0.000015	-
Rv2588c	yajC	2	94.4	168.8	107.8	104.0	124.6	199.6	-0.183	0.624	0.000	-0.050	0.200	0.859	94.4	168.8	107.8	104.0	124.6	199.6	1.00	1.00	1.00	1.00	1.00	1.00	0.286146	1.000000	-
Rv2589	gabT	22	226.4	212.8	213.9	222.3	209.1	227.4	0.081	-0.007	0.000	0.055	-0.032	0.086	249.1	222.9	229.5	244.6	219.1	244.0	0.91	0.95	0.93	0.91	0.95	0.93	0.996445	1.000000	-
Rv2590	fadD9	55	151.8	178.3	170.8	183.2	178.2	183.9	-0.165	0.060	0.000	0.098	0.059	0.103	164.8	185.0	186.1	196.3	188.5	202.3	0.92	0.96	0.92	0.93	0.95	0.91	0.169901	0.998408	-
Rv2591	PE_PGRS44	12	218.4	219.3	234.7	202.9	262.5	238.6	-0.102	-0.096	0.000	-0.205	0.158	0.023	224.6	239.2	234.7	221.4	286.3	272.7	0.97	0.92	1.00	0.92	0.92	0.88	0.297123	1.000000	-
Rv2592c	ruvB	8	47.3	64.1	58.0	56.8	73.3	53.8	-0.268	0.133	0.000	-0.027	0.314	-0.099	75.7	93.2	84.4	85.3	97.7	66.2	0.62	0.69	0.69	0.67	0.75	0.81	0.988445	1.000000	-
Rv2593c	ruvA	6	70.2	67.8	67.2	50.9	68.7	99.7	0.060	0.013	0.000	-0.369	0.030	0.537	97.3	81.4	89.6	83.3	68.7	133.0	0.72	0.83	0.75	0.61	1.00	0.75	0.315773	1.000000	-
Rv2594c	ruvC	4	24.1	29.1	18.8	18.9	16.9	17.9	0.290	0.522	0.000	0.005	-0.118	-0.055	57.8	38.8	50.1	37.7	22.6	35.8	0.42	0.75	0.38	0.50	0.75	0.50	0.350370	1.000000	-
Rv2595	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2596	-	8	246.6	260.2	217.5	241.3	249.7	271.6	0.178	0.254	0.000	0.147	0.195	0.314	246.6	260.2	217.5	241.3	249.7	271.6	1.00	1.00	1.00	1.00	1.00	1.00	0.964851	1.000000	-
Rv2597	-	6	405.0	341.1	399.9	327.2	347.2	341.9	0.018	-0.226	0.000	-0.285	-0.201	-0.223	405.0	341.1	399.9	327.2	347.2	341.9	1.00	1.00	1.00	1.00	1.00	1.00	0.738607	1.000000	-
Rv2598	-	4	233.7	177.9	204.9	152.7	236.2	196.2	0.186	-0.198	0.000	-0.412	0.200	-0.061	233.7	177.9	273.2	183.2	236.2	196.2	1.00	1.00	0.75	0.83	1.00	1.00	0.459846	1.000000	-
Rv2599	-	12	155.0	133.5	140.9	146.6	183.3	138.5	0.133	-0.075	0.000	0.055	0.369	-0.024	155.0	133.5	161.0	146.6	183.3	151.1	1.00	1.00	0.88	1.00	1.00	0.92	0.231642	1.000000	-
Rv2600	-	8	170.5	140.5	181.3	146.6	166.4	158.5	-0.086	-0.357	0.000	-0.297	-0.120	-0.188	194.9	172.9	181.3	167.6	190.1	181.2	0.88	0.81	1.00	0.88	0.88	0.88	0.852132	1.000000	-
Rv2601	speE	24	253.3	220.3	245.7	218.4	232.9	225.9	0.043	-0.154	0.000	-0.167	-0.076	-0.119	253.3	225.0	251.0	221.4	232.9	230.7	1.00	0.98	0.98	0.99	1.00	0.98	0.905746	1.000000	-
Rv2601A	-	2	13.1	2.6	6.3	18.9	0.0	5.1	0.681	-0.572	0.000	1.081	-1.176	-0.169	26.2	10.4	25.2	22.7	0.0	10.1	0.50	0.25	0.25	0.83	0.00	0.50	0.184786	1.000000	-
Rv2602	-	7	266.9	275.8	260.0	285.3	282.3	308.8	0.037	0.084	0.000	0.132	0.117	0.244	266.9	275.8	260.0	285.3	282.3	308.8	1.00	1.00	1.00	1.00	1.00	1.00	0.986674	1.000000	-
Rv2603c	-	7	20.9	18.9	12.0	19.9	17.4	25.2	0.605	0.488	0.000	0.545	0.395	0.824	27.5	24.1	24.1	29.8	24.4	29.4	0.76	0.79	0.50	0.67	0.71	0.86	0.626231	1.000000	-
Rv2604c	-	4	65.6	57.4	81.1	70.0	66.1	55.5	-0.288	-0.465	0.000	-0.200	-0.276	-0.510	65.6	76.5	92.7	93.3	88.2	74.0	1.00	0.75	0.88	0.75	0.75	0.75	0.374385	1.000000	-
Rv2605c	tesB2	9	137.3	126.8	125.4	78.9	100.9	129.1	0.126	0.016	0.000	-0.636	-0.301	0.040	142.6	134.3	125.4	81.9	100.9	129.1	0.96	0.94	1.00	0.96	1.00	1.00	0.273729	1.000000	-
Rv2606c	-	10	115.6	112.6	160.5	87.6	109.7	117.8	-0.457	-0.493	0.000	-0.838	-0.529	-0.431	144.5	125.1	160.5	90.6	121.9	130.9	0.80	0.90	1.00	0.97	0.90	0.90	0.142802	0.923467	-
Rv2607	pdxH	12	135.4	131.2	151.0	155.6	146.1	147.3	-0.151	-0.195	0.000	0.043	-0.046	-0.035	147.7	143.1	172.5	180.8	152.4	176.7	0.92	0.92	0.88	0.86	0.96	0.83	0.863874	1.000000	-
Rv2608	PPE42	30	96.9	109.1	99.3	105.5	103.6	112.2	-0.034	0.130	0.000	0.084	0.059	0.168	122.8	125.9	126.8	121.8	124.4	120.2	0.79	0.87	0.78	0.87	0.83	0.93	0.796785	1.000000	-
Rv2609c	-	13	67.0	94.3	111.9	87.6	118.2	86.3	-0.699	-0.235	0.000	-0.336	0.076	-0.357	130.6	175.1	207.7	162.7	219.5	160.2	0.51	0.54	0.54	0.54	0.54	0.54	0.877205	1.000000	-
Rv2610c	pimA	14	0.0	0.0	0.0	0.0	0.0	0.4	0.000	0.000	0.000	0.000	0.000	0.107	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.04	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2611c	-	13	1.6	1.5	3.8	0.7	3.3	0.0	-0.417	-0.432	0.000	-0.629	-0.096	-0.821	21.0	13.4	33.2	13.9	14.2	0.0	0.08	0.12	0.12	0.05	0.23	0.00	0.144917	0.930416	-
Rv2612c	pgsA1	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2613c	-	9	26.2	36.2	26.7	33.9	34.7	25.0	-0.022	0.379	0.000	0.296	0.324	-0.079	44.2	65.2	43.7	76.3	44.6	37.5	0.59	0.56	0.61	0.44	0.78	0.67	0.070026	0.599576	-
Rv2614c	thrS	27	0.3	0.0	0.0	0.0	0.3	0.0	0.078	0.000	0.000	0.000	0.075	0.000	22.6	0.0	0.0	0.0	14.5	0.0	0.01	0.00	0.00	0.00	0.02	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2614A	-	6	51.3	55.0	37.7	44.5	38.5	40.4	0.401	0.492	0.000	0.215	0.028	0.089	77.0	66.0	64.6	53.4	57.8	48.5	0.67	0.83	0.58	0.83	0.67	0.83	0.886686	1.000000	-
Rv2615c	PE_PGRS45	16	203.6	228.3	214.5	183.9	176.2	179.6	-0.074	0.088	0.000	-0.217	-0.277	-0.250	296.1	332.1	381.4	259.7	194.4	221.1	0.69	0.69	0.56	0.71	0.91	0.81	0.235907	1.000000	-
Rv2616	-	4	256.4	275.6	257.6	253.2	227.1	236.4	-0.007	0.095	0.000	-0.025	-0.178	-0.121	256.4	275.6	257.6	337.5	227.1	315.2	1.00	1.00	1.00	0.75	1.00	0.75	0.224496	1.000000	-
Rv2617c	-	8	419.3	348.9	368.3	361.2	352.1	335.7	0.185	-0.077	0.000	-0.027	-0.064	-0.132	419.3	348.9	368.3	361.2	352.1	335.7	1.00	1.00	1.00	1.00	1.00	1.00	0.937346	1.000000	-
Rv2618	-	9	191.7	148.3	197.8	148.0	163.8	172.5	-0.044	-0.404	0.000	-0.407	-0.264	-0.192	207.0	166.8	222.5	166.5	173.5	172.5	0.93	0.89	0.89	0.89	0.94	1.00	0.877725	1.000000	-
Rv2619c	-	2	212.6	156.6	162.6	166.7	156.0	109.7	0.377	-0.052	0.000	0.035	-0.058	-0.547	212.6	156.6	162.6	166.7	156.0	109.7	1.00	1.00	1.00	1.00	1.00	1.00	0.777162	1.000000	-
Rv2620c	-	4	123.5	151.7	84.3	133.4	145.3	175.2	0.525	0.811	0.000	0.632	0.751	1.013	123.5	151.7	84.3	133.4	145.3	175.2	1.00	1.00	1.00	1.00	1.00	1.00	0.090016	0.697405	-
Rv2621c	-	4	44.4	62.5	64.8	60.2	37.9	72.9	-0.498	-0.048	0.000	-0.100	-0.702	0.158	88.9	100.1	86.4	80.2	60.6	97.2	0.50	0.62	0.75	0.75	0.62	0.75	0.945101	1.000000	-
Rv2622	-	8	131.2	129.6	115.8	135.2	116.9	141.4	0.173	0.157	0.000	0.215	0.013	0.278	157.4	148.1	168.4	147.5	143.8	161.6	0.83	0.88	0.69	0.92	0.81	0.88	0.959304	1.000000	-
Rv2623	TB31.7	7	64.3	63.0	83.1	69.8	70.2	71.1	-0.346	-0.374	0.000	-0.236	-0.227	-0.210	96.5	110.2	105.7	77.1	81.9	71.1	0.67	0.57	0.79	0.90	0.86	1.00	0.127798	0.855563	-
Rv2624c	-	11	61.7	77.8	64.0	61.1	53.4	50.3	-0.048	0.263	0.000	-0.062	-0.240	-0.320	75.4	90.1	88.0	91.6	69.1	58.2	0.82	0.86	0.73	0.67	0.77	0.86	0.575236	1.000000	-
Rv2625c	-	18	126.7	88.2	110.0	98.3	111.5	74.9	0.196	-0.303	0.000	-0.155	0.019	-0.526	148.8	105.8	123.7	120.6	121.7	99.8	0.85	0.83	0.89	0.81	0.92	0.75	0.601175	1.000000	-
Rv2626c	-	6	66.2	74.3	68.5	44.4	41.2	48.2	-0.046	0.110	0.000	-0.573	-0.671	-0.467	91.6	111.5	91.3	57.1	49.4	72.3	0.72	0.67	0.75	0.78	0.83	0.67	0.839133	1.000000	-
Rv2627c	-	21	55.2	40.2	50.3	34.4	38.7	41.4	0.123	-0.291	0.000	-0.489	-0.338	-0.253	64.4	46.9	60.4	42.5	45.2	54.3	0.86	0.86	0.83	0.81	0.86	0.76	0.289416	1.000000	-
Rv2628	-	8	129.3	76.6	112.8	106.3	110.7	69.8	0.190	-0.528	0.000	-0.081	-0.026	-0.655	172.4	94.3	128.9	141.7	118.1	85.9	0.75	0.81	0.88	0.75	0.94	0.81	0.704045	1.000000	-
Rv2629	-	21	81.1	66.1	85.6	82.8	77.4	69.8	-0.072	-0.349	0.000	-0.044	-0.135	-0.276	100.2	77.1	105.7	111.0	87.9	97.7	0.81	0.86	0.81	0.75	0.88	0.71	0.413459	1.000000	-
Rv2630	-	9	76.1	73.3	88.9	114.6	112.8	86.9	-0.212	-0.262	0.000	0.349	0.327	-0.031	93.3	82.4	106.7	119.0	119.4	104.3	0.81	0.89	0.83	0.96	0.94	0.83	0.613803	1.000000	-
Rv2631	-	20	112.5	129.6	118.8	136.4	111.1	123.0	-0.076	0.120	0.000	0.192	-0.093	0.048	129.8	144.0	144.0	151.6	123.5	140.6	0.87	0.90	0.82	0.90	0.90	0.88	0.989939	1.000000	-
Rv2632c	-	3	58.3	68.0	31.3	58.8	64.1	66.4	0.801	1.006	0.000	0.811	0.926	0.973	87.5	102.0	47.0	88.2	64.1	99.5	0.67	0.67	0.67	0.67	1.00	0.67	0.662047	1.000000	-
Rv2633c	-	10	120.8	132.2	108.9	135.6	96.3	148.4	0.144	0.269	0.000	0.304	-0.169	0.431	129.4	155.6	108.9	140.2	96.3	156.3	0.93	0.85	1.00	0.97	1.00	0.95	0.167807	0.995413	-
Rv2634c	PE_PGRS46	32	133.1	131.9	131.1	142.2	130.4	126.3	0.022	0.008	0.000	0.113	-0.008	-0.052	199.7	205.9	215.1	203.7	170.3	165.0	0.67	0.64	0.61	0.70	0.77	0.77	0.875786	1.000000	-
Rv2635	-	6	63.7	79.8	59.2	66.7	61.2	57.1	0.097	0.401	0.000	0.159	0.042	-0.050	114.7	79.8	59.2	70.7	61.2	68.5	0.56	1.00	1.00	0.94	1.00	0.83	0.001086	0.021553	-
Rv2636	-	14	158.4	163.2	160.3	158.5	156.2	162.8	-0.016	0.025	0.000	-0.016	-0.036	0.022	179.8	175.7	166.2	158.5	168.2	175.3	0.88	0.93	0.96	1.00	0.93	0.93	0.524103	1.000000	-
Rv2637	dedA	9	147.5	143.6	125.0	190.3	156.9	144.6	0.231	0.193	0.000	0.587	0.317	0.203	147.5	143.6	140.6	190.3	156.9	144.6	1.00	1.00	0.89	1.00	1.00	1.00	0.572983	1.000000	-
Rv2638	-	4	136.9	152.4	106.2	122.3	109.6	104.6	0.352	0.501	0.000	0.194	0.043	-0.022	136.9	152.4	106.2	122.3	109.6	104.6	1.00	1.00	1.00	1.00	1.00	1.00	0.888764	1.000000	-
Rv2639c	-	6	125.6	91.1	87.6	103.6	158.4	105.5	0.496	0.054	0.000	0.230	0.820	0.255	133.0	109.4	87.6	103.6	158.4	105.5	0.94	0.83	1.00	1.00	1.00	1.00	0.190572	1.000000	-
Rv2640c	-	4	185.4	199.0	151.7	106.2	78.3	170.9	0.281	0.381	0.000	-0.495	-0.912	0.167	185.4	199.0	151.7	106.2	78.3	170.9	1.00	1.00	1.00	1.00	1.00	1.00	0.057970	0.524487	-
Rv2641	cadI	6	63.7	73.8	62.2	61.0	57.1	57.7	0.031	0.229	0.000	-0.027	-0.114	-0.100	95.5	98.4	83.0	78.4	76.2	69.3	0.67	0.75	0.75	0.78	0.75	0.83	0.999083	1.000000	-
Rv2642	-	4	209.1	200.3	196.1	174.3	190.1	198.4	0.090	0.030	0.000	-0.165	-0.044	0.016	209.1	200.3	196.1	174.3	190.1	198.4	1.00	1.00	1.00	1.00	1.00	1.00	0.992802	1.000000	-
Rv2643	arsC	30	144.1	146.9	128.3	154.0	144.0	150.8	0.162	0.189	0.000	0.254	0.161	0.225	147.4	152.0	132.7	159.3	144.0	158.7	0.98	0.97	0.97	0.97	1.00	0.95	0.540658	1.000000	-
Rv2644c	-	6	52.1	55.9	54.9	83.8	71.1	84.5	-0.069	0.026	0.000	0.569	0.347	0.580	66.9	67.1	82.3	94.3	85.4	101.4	0.78	0.83	0.67	0.89	0.83	0.83	0.598051	1.000000	-
Rv2645	-	4	102.5	73.0	57.8	77.3	92.4	76.4	0.776	0.314	0.000	0.390	0.634	0.375	111.8	73.0	66.0	77.3	92.4	76.4	0.92	1.00	0.88	1.00	1.00	1.00	0.710115	1.000000	-
Rv2646	-	19	212.3	202.1	184.0	196.6	182.6	183.3	0.202	0.132	0.000	0.094	-0.010	-0.005	212.3	207.5	188.9	196.6	182.6	193.4	1.00	0.97	0.97	1.00	1.00	0.95	0.647485	1.000000	-
Rv2647	-	5	35.0	45.9	37.5	43.7	39.0	32.4	-0.088	0.260	0.000	0.194	0.048	-0.184	52.5	91.9	46.9	72.8	65.0	54.0	0.67	0.50	0.80	0.60	0.60	0.60	0.711316	1.000000	-
Rv2648	-	4	185.0	228.2	206.6	239.8	235.6	156.0	-0.155	0.140	0.000	0.210	0.185	-0.394	222.0	228.2	206.6	239.8	235.6	156.0	0.83	1.00	1.00	1.00	1.00	1.00	0.652492	1.000000	-
Rv2649	-	22	277.1	280.5	315.5	295.6	276.3	294.6	-0.184	-0.167	0.000	-0.092	-0.188	-0.097	345.0	333.6	385.6	368.1	328.6	332.3	0.80	0.84	0.82	0.80	0.84	0.89	0.998502	1.000000	-
Rv2650c	-	8	38.2	8.4	19.6	30.1	13.5	20.6	0.814	-0.880	0.000	0.513	-0.408	0.058	61.1	22.3	39.2	60.1	27.1	36.6	0.62	0.38	0.50	0.50	0.50	0.56	0.049043	0.463773	-
Rv2651c	-	5	4.6	26.3	33.3	7.6	23.1	11.1	-2.001	-0.290	0.000	-1.605	-0.445	-1.252	17.1	43.8	66.5	37.9	46.2	36.9	0.27	0.60	0.50	0.20	0.50	0.30	0.063574	0.556273	-
Rv2652c	-	7	40.9	42.1	17.0	21.0	21.8	38.9	1.059	1.096	0.000	0.240	0.281	0.994	71.6	45.4	34.1	34.0	33.9	45.4	0.57	0.93	0.50	0.62	0.64	0.86	0.124930	0.842014	-
Rv2653c	-	4	24.8	44.5	76.0	33.8	57.7	45.9	-1.442	-0.710	0.000	-1.064	-0.369	-0.669	49.6	59.4	152.0	40.5	65.9	91.9	0.50	0.75	0.50	0.83	0.88	0.50	0.060206	0.537411	-
Rv2654c	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2655c	-	19	154.4	165.8	184.9	164.9	155.0	179.9	-0.253	-0.153	0.000	-0.160	-0.247	-0.038	160.0	165.8	195.1	164.9	159.2	179.9	0.96	1.00	0.95	1.00	0.97	1.00	0.518524	1.000000	-
Rv2656c	-	4	129.4	191.9	190.1	249.2	176.9	161.4	-0.538	0.013	0.000	0.382	-0.101	-0.229	141.2	191.9	190.1	249.2	176.9	161.4	0.92	1.00	1.00	1.00	1.00	1.00	0.889451	1.000000	-
Rv2657c	-	5	80.8	131.2	83.7	95.3	107.7	104.6	-0.049	0.618	0.000	0.176	0.346	0.305	93.2	164.0	83.7	95.3	107.7	104.6	0.87	0.80	1.00	1.00	1.00	1.00	0.041977	0.422835	-
Rv2658c	-	10	190.3	180.3	190.6	212.6	193.2	207.6	-0.002	-0.078	0.000	0.154	0.019	0.120	219.6	200.3	211.7	219.9	214.6	207.6	0.87	0.90	0.90	0.97	0.90	1.00	0.868954	1.000000	-
Rv2659c	-	20	151.2	168.9	128.7	172.2	148.3	180.3	0.225	0.379	0.000	0.406	0.197	0.471	156.5	168.9	132.0	181.2	156.1	180.3	0.97	1.00	0.97	0.95	0.95	1.00	0.271843	1.000000	-
Rv2660c	-	3	92.4	122.3	90.8	130.0	133.6	166.1	0.024	0.410	0.000	0.495	0.533	0.837	166.3	146.7	272.4	195.1	200.4	249.2	0.56	0.83	0.33	0.67	0.67	0.67	0.953415	1.000000	-
Rv2661c	-	2	177.4	196.3	158.3	185.7	177.3	186.2	0.160	0.302	0.000	0.224	0.159	0.227	177.4	196.3	158.3	185.7	177.3	186.2	1.00	1.00	1.00	1.00	1.00	1.00	0.938120	1.000000	-
Rv2662	-	4	116.2	113.3	108.5	94.9	118.5	89.6	0.094	0.059	0.000	-0.185	0.121	-0.264	139.4	151.1	124.0	103.5	158.0	119.4	0.83	0.75	0.88	0.92	0.75	0.75	0.932283	1.000000	-
Rv2663	-	9	151.2	149.2	128.6	175.4	135.4	158.5	0.225	0.207	0.000	0.433	0.072	0.291	151.2	149.2	144.7	175.4	135.4	158.5	1.00	1.00	0.89	1.00	1.00	1.00	0.472376	1.000000	-
Rv2664	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2665	-	5	85.6	72.3	71.8	46.3	67.0	63.6	0.238	0.010	0.000	-0.582	-0.094	-0.163	98.7	72.3	79.8	53.4	67.0	63.6	0.87	1.00	0.90	0.87	1.00	1.00	0.536378	1.000000	-
Rv2666	-	9	295.5	276.5	306.1	289.4	246.6	288.8	-0.050	-0.144	0.000	-0.080	-0.306	-0.082	332.4	311.0	324.1	289.4	246.6	288.8	0.89	0.89	0.94	1.00	1.00	1.00	0.513403	1.000000	-
Rv2667	clpC2	5	133.4	203.9	124.2	148.9	167.7	171.2	0.099	0.693	0.000	0.252	0.419	0.448	166.7	254.8	155.2	186.1	209.7	214.1	0.80	0.80	0.80	0.80	0.80	0.80	0.652448	1.000000	-
Rv2668	-	9	125.5	152.0	164.6	241.6	240.0	158.9	-0.379	-0.111	0.000	0.540	0.531	-0.050	135.5	152.0	164.6	271.8	240.0	158.9	0.93	1.00	1.00	0.89	1.00	1.00	0.001511	0.028578	-
Rv2669	-	6	53.8	54.3	48.8	57.5	49.5	39.0	0.127	0.140	0.000	0.214	0.016	-0.291	74.5	81.5	97.7	94.0	84.8	66.9	0.72	0.67	0.50	0.61	0.58	0.58	0.969393	1.000000	-
Rv2670c	-	16	96.1	106.8	97.8	87.0	99.5	92.1	-0.023	0.121	0.000	-0.160	0.024	-0.081	107.3	122.0	130.4	99.4	113.7	113.4	0.90	0.88	0.75	0.88	0.88	0.81	0.800507	1.000000	-
Rv2671	ribD	10	67.7	97.6	68.8	103.8	80.6	113.7	-0.021	0.476	0.000	0.561	0.215	0.687	88.3	114.8	76.4	111.2	94.8	133.8	0.77	0.85	0.90	0.93	0.85	0.85	0.406225	1.000000	-
Rv2672	-	16	136.1	135.0	128.8	162.2	162.9	132.7	0.076	0.065	0.000	0.321	0.327	0.040	159.4	160.0	133.0	185.4	168.1	151.6	0.85	0.84	0.97	0.88	0.97	0.88	0.304873	1.000000	-
Rv2673	-	26	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2674	-	6	265.8	237.2	268.3	237.6	290.8	242.5	-0.013	-0.174	0.000	-0.172	0.114	-0.143	265.8	237.2	268.3	237.6	290.8	264.5	1.00	1.00	1.00	1.00	1.00	0.92	0.824637	1.000000	-
Rv2675c	-	14	251.0	223.0	235.1	231.3	241.0	261.3	0.093	-0.074	0.000	-0.023	0.035	0.150	285.0	249.8	253.2	249.1	259.5	271.0	0.88	0.89	0.93	0.93	0.93	0.96	0.994029	1.000000	-
Rv2676c	-	12	1.6	0.8	1.8	193.4	207.7	22.8	-0.048	-0.226	0.000	4.863	4.963	2.030	14.4	19.9	21.8	193.4	207.7	28.9	0.11	0.04	0.08	1.00	1.00	0.79	0.000000	0.000000	-
Rv2677c	hemY	11	3.3	0.5	1.1	276.4	211.7	25.5	0.426	-0.172	0.000	5.517	5.140	2.310	17.9	10.0	12.6	276.4	211.7	31.1	0.18	0.05	0.09	1.00	1.00	0.82	0.000000	0.000000	-
Rv2678c	hemE	13	1.7	0.0	1.2	123.0	127.1	0.4	0.118	-0.309	0.000	4.369	4.415	-0.208	16.8	0.0	31.0	145.4	150.2	9.4	0.10	0.00	0.04	0.85	0.85	0.04	0.000000	0.000000	-
Rv2679	echA15	4	160.4	222.9	207.9	153.7	164.9	222.3	-0.364	0.098	0.000	-0.424	-0.326	0.094	160.4	222.9	207.9	153.7	164.9	222.3	1.00	1.00	1.00	1.00	1.00	1.00	0.143638	0.925875	-
Rv2680	-	10	89.1	103.6	79.0	80.1	82.7	84.4	0.164	0.371	0.000	0.019	0.063	0.090	92.2	103.6	79.0	80.1	82.7	84.4	0.97	1.00	1.00	1.00	1.00	1.00	0.863440	1.000000	-
Rv2681	-	19	135.6	132.4	147.8	130.2	135.2	141.6	-0.120	-0.154	0.000	-0.177	-0.125	-0.060	164.5	167.7	156.0	168.6	160.5	163.0	0.82	0.79	0.95	0.77	0.84	0.87	0.556172	1.000000	-
Rv2682c	dxs1	22	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2683	-	10	245.6	195.5	220.6	165.4	166.6	164.5	0.151	-0.170	0.000	-0.405	-0.395	-0.412	254.0	195.5	232.2	183.8	185.1	182.8	0.97	1.00	0.95	0.90	0.90	0.90	0.550073	1.000000	-
Rv2684	arsA	17	206.2	133.9	206.7	86.4	99.0	115.0	-0.003	-0.608	0.000	-1.211	-1.026	-0.819	206.2	133.9	206.7	88.2	99.0	115.0	1.00	1.00	1.00	0.98	1.00	1.00	0.000000	0.000006	-
Rv2685	arsB1	9	143.1	122.0	152.2	126.1	146.0	116.4	-0.086	-0.308	0.000	-0.261	-0.058	-0.373	143.1	122.0	161.1	141.9	146.0	116.4	1.00	1.00	0.94	0.89	1.00	1.00	0.354752	1.000000	-
Rv2686c	-	12	122.6	100.1	116.6	113.5	128.8	89.0	0.070	-0.209	0.000	-0.037	0.138	-0.371	129.8	114.4	147.2	131.8	128.8	106.8	0.94	0.88	0.79	0.86	1.00	0.83	0.328090	1.000000	-
Rv2687c	-	11	98.9	109.7	91.6	92.1	89.7	97.9	0.106	0.248	0.000	0.008	-0.027	0.091	112.5	109.7	106.0	101.3	98.7	119.6	0.88	1.00	0.86	0.91	0.91	0.82	0.698735	1.000000	-
Rv2688c	-	11	101.6	89.7	95.6	90.9	93.2	115.4	0.084	-0.086	0.000	-0.068	-0.035	0.260	119.7	94.0	105.1	100.0	102.5	126.9	0.85	0.95	0.91	0.91	0.91	0.91	0.936722	1.000000	-
Rv2689c	-	21	283.3	218.9	282.7	280.3	263.1	239.0	0.003	-0.362	0.000	-0.012	-0.102	-0.238	313.1	235.7	339.3	315.4	298.6	286.7	0.90	0.93	0.83	0.89	0.88	0.83	0.772795	1.000000	-
Rv2690c	-	31	19.1	21.5	14.9	22.0	30.5	20.2	0.273	0.409	0.000	0.441	0.834	0.338	31.1	27.2	33.1	33.6	37.9	27.8	0.61	0.79	0.45	0.66	0.81	0.73	0.000362	0.008169	-
Rv2691	ceoB	14	90.8	136.8	122.5	107.7	112.1	134.2	-0.413	0.153	0.000	-0.178	-0.122	0.127	105.9	159.6	137.2	119.0	120.8	139.2	0.86	0.86	0.89	0.90	0.93	0.96	0.552121	1.000000	-
Rv2692	ceoC	2	57.2	91.4	112.7	79.3	73.2	85.0	-0.921	-0.288	0.000	-0.481	-0.591	-0.387	57.2	91.4	112.7	79.3	73.2	85.0	1.00	1.00	1.00	1.00	1.00	1.00	0.796537	1.000000	-
Rv2693c	-	10	307.3	283.2	307.3	234.3	289.0	304.8	0.000	-0.116	0.000	-0.384	-0.087	-0.011	307.3	283.2	323.5	260.3	289.0	304.8	1.00	1.00	0.95	0.90	1.00	1.00	0.497169	1.000000	-
Rv2694c	-	6	209.7	256.4	188.1	192.7	226.4	241.6	0.153	0.437	0.000	0.034	0.261	0.353	251.7	307.7	225.7	231.2	246.9	289.9	0.83	0.83	0.83	0.83	0.92	0.83	0.979731	1.000000	-
Rv2695	-	10	299.3	311.7	308.4	332.2	317.1	304.9	-0.042	0.015	0.000	0.106	0.039	-0.016	299.3	311.7	324.6	343.7	317.1	304.9	1.00	1.00	0.95	0.97	1.00	1.00	0.915388	1.000000	-
Rv2696c	-	9	210.5	228.1	159.5	187.0	212.9	208.6	0.390	0.503	0.000	0.223	0.405	0.377	270.6	373.3	205.1	265.8	239.5	313.0	0.78	0.61	0.78	0.70	0.89	0.67	0.371812	1.000000	-
Rv2697c	dut	5	3.7	2.0	15.6	0.0	0.0	2.2	-1.238	-1.549	0.000	-2.043	-2.043	-1.523	14.0	10.2	22.3	0.0	0.0	21.7	0.27	0.20	0.70	0.00	0.00	0.10	0.000489	0.010612	-
Rv2698	-	12	4.7	10.9	5.4	1.2	2.3	6.4	-0.106	0.607	0.000	-0.760	-0.512	0.119	17.0	21.8	21.8	14.1	18.6	15.2	0.28	0.50	0.25	0.08	0.12	0.42	0.010437	0.143109	-
Rv2699c	-	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2700	-	7	29.7	70.2	60.6	71.5	94.8	50.1	-0.920	0.198	0.000	0.221	0.605	-0.252	44.5	122.9	84.9	100.1	147.5	63.7	0.67	0.57	0.71	0.71	0.64	0.79	0.003300	0.056276	-
Rv2701c	suhB	9	310.3	215.5	245.3	244.4	199.9	219.9	0.333	-0.182	0.000	-0.005	-0.289	-0.154	322.2	215.5	259.7	244.4	224.9	247.4	0.96	1.00	0.94	1.00	0.89	0.89	0.602468	1.000000	-
Rv2702	ppgK	13	12.7	17.9	18.5	28.1	30.6	18.4	-0.413	-0.037	0.000	0.490	0.598	-0.009	30.9	27.4	34.4	43.8	36.2	31.9	0.41	0.65	0.54	0.64	0.85	0.58	0.102423	0.747565	-
Rv2703	sigA	18	0.2	0.0	0.0	0.0	0.0	0.0	0.061	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.02	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2704	-	10	483.1	385.1	399.3	426.1	392.8	326.2	0.272	-0.052	0.000	0.092	-0.023	-0.288	517.6	385.1	420.3	426.1	413.5	343.4	0.93	1.00	0.95	1.00	0.95	0.95	0.875856	1.000000	-
Rv2705c	-	9	145.1	146.9	132.9	145.4	163.2	187.4	0.122	0.140	0.000	0.125	0.286	0.481	145.1	146.9	132.9	145.4	163.2	187.4	1.00	1.00	1.00	1.00	1.00	1.00	0.801388	1.000000	-
Rv2706c	-	2	212.0	183.4	195.0	186.9	153.0	241.0	0.118	-0.086	0.000	-0.060	-0.340	0.299	212.0	183.4	195.0	186.9	153.0	241.0	1.00	1.00	1.00	1.00	1.00	1.00	0.970144	1.000000	-
Rv2707	-	27	181.6	175.0	190.1	109.3	131.4	162.2	-0.064	-0.116	0.000	-0.772	-0.516	-0.223	191.0	175.0	197.4	116.4	139.1	162.2	0.95	1.00	0.96	0.94	0.94	1.00	0.001707	0.031683	-
Rv2708c	-	6	139.8	138.2	126.2	156.6	165.1	183.5	0.143	0.126	0.000	0.300	0.375	0.523	193.6	184.2	189.3	156.6	165.1	220.2	0.72	0.75	0.67	1.00	1.00	0.83	0.136245	0.899231	-
Rv2709	-	9	217.7	207.1	186.3	207.5	190.3	205.0	0.219	0.149	0.000	0.152	0.030	0.135	226.1	232.9	209.6	233.4	201.5	230.6	0.96	0.89	0.89	0.89	0.94	0.89	0.987934	1.000000	-
Rv2710	sigB	11	126.0	122.6	127.6	55.7	67.7	114.3	-0.018	-0.056	0.000	-1.128	-0.868	-0.153	126.0	122.6	133.7	57.4	67.7	114.3	1.00	1.00	0.95	0.97	1.00	1.00	0.000050	0.001379	-
Rv2711	ideR	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2712c	-	13	275.6	260.0	234.2	282.9	216.9	205.7	0.231	0.148	0.000	0.267	-0.108	-0.183	325.7	307.3	264.7	344.7	235.0	222.8	0.85	0.85	0.88	0.82	0.92	0.92	0.820343	1.000000	-
Rv2713	sthA	21	105.7	104.7	110.1	99.4	96.3	116.4	-0.056	-0.069	0.000	-0.140	-0.185	0.078	123.3	109.9	125.0	104.4	106.4	122.3	0.86	0.95	0.88	0.95	0.90	0.95	0.786855	1.000000	-
Rv2714	-	15	96.4	102.0	98.9	82.3	91.6	109.8	-0.036	0.041	0.000	-0.252	-0.106	0.143	114.1	109.2	114.2	88.2	98.1	117.6	0.84	0.93	0.87	0.93	0.93	0.93	0.919781	1.000000	-
Rv2715	-	16	65.9	65.2	79.0	66.4	71.8	69.4	-0.244	-0.258	0.000	-0.233	-0.128	-0.175	83.3	72.0	81.5	81.8	82.1	74.0	0.79	0.91	0.97	0.81	0.88	0.94	0.486575	1.000000	-
Rv2716	-	10	130.3	119.0	132.1	136.4	136.8	136.9	-0.018	-0.144	0.000	0.045	0.049	0.050	177.7	148.8	188.7	170.5	161.0	195.6	0.73	0.80	0.70	0.80	0.85	0.70	0.985205	1.000000	-
Rv2717c	-	10	89.9	94.6	82.5	86.4	91.2	93.4	0.118	0.186	0.000	0.063	0.136	0.170	96.4	94.6	103.1	89.4	91.2	93.4	0.93	1.00	0.80	0.97	1.00	1.00	0.373439	1.000000	-
Rv2718c	-	7	198.0	192.8	210.0	193.3	212.7	223.0	-0.083	-0.121	0.000	-0.117	0.018	0.085	231.0	224.9	245.0	202.9	248.2	260.2	0.86	0.86	0.86	0.95	0.86	0.86	0.989294	1.000000	-
Rv2719c	-	4	197.6	102.0	159.4	119.6	118.2	101.5	0.301	-0.620	0.000	-0.400	-0.416	-0.627	215.6	102.0	159.4	119.6	118.2	101.5	0.92	1.00	1.00	1.00	1.00	1.00	0.823829	1.000000	-
Rv2720	lexA	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2721c	-	23	75.6	85.7	83.4	86.5	87.1	107.9	-0.132	0.038	0.000	0.049	0.059	0.353	96.7	93.9	93.6	94.7	97.7	115.5	0.78	0.91	0.89	0.91	0.89	0.93	0.462318	1.000000	-
Rv2722	-	6	6.3	10.3	8.3	8.4	7.1	11.8	-0.240	0.201	0.000	0.008	-0.141	0.337	22.6	20.6	20.0	25.2	21.2	23.6	0.28	0.50	0.42	0.33	0.33	0.50	0.976376	1.000000	-
Rv2723	-	27	83.1	89.3	100.1	110.5	100.9	102.8	-0.254	-0.157	0.000	0.137	0.011	0.037	108.6	109.6	138.6	129.8	123.9	106.8	0.77	0.81	0.72	0.85	0.81	0.96	0.113781	0.795442	-
Rv2724c	fadE20	23	128.7	123.3	133.2	126.8	127.9	149.4	-0.048	-0.106	0.000	-0.068	-0.056	0.160	132.5	132.0	145.8	138.9	130.8	149.4	0.97	0.93	0.91	0.91	0.98	1.00	0.364780	1.000000	-
Rv2725c	hflX	17	194.0	186.8	204.6	184.6	180.4	188.3	-0.075	-0.128	0.000	-0.144	-0.177	-0.116	194.0	211.7	217.4	188.3	191.7	213.4	1.00	0.88	0.94	0.98	0.94	0.88	0.125724	0.843132	-
Rv2726c	dapF	10	0.0	0.0	0.0	0.0	0.7	0.9	0.000	0.000	0.000	0.000	0.195	0.249	0.0	0.0	0.0	0.0	14.5	18.8	0.00	0.00	0.00	0.00	0.05	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2727c	miaA	12	18.9	25.2	21.3	8.2	9.1	27.3	-0.137	0.197	0.000	-0.993	-0.901	0.297	31.0	31.8	36.5	18.5	19.8	32.8	0.61	0.79	0.58	0.44	0.46	0.83	0.001038	0.020916	-
Rv2728c	-	10	142.2	145.7	176.8	162.1	154.1	153.6	-0.305	-0.271	0.000	-0.122	-0.193	-0.197	152.4	145.7	208.1	167.7	171.2	153.6	0.93	1.00	0.85	0.97	0.90	1.00	0.551469	1.000000	-
Rv2729c	-	11	222.4	285.8	264.8	251.9	247.5	278.1	-0.247	0.108	0.000	-0.071	-0.095	0.069	244.7	314.4	306.6	277.1	272.3	291.3	0.91	0.91	0.86	0.91	0.91	0.95	0.981703	1.000000	-
Rv2730	-	11	139.7	187.5	177.6	177.6	160.7	212.8	-0.336	0.076	0.000	-0.000	-0.140	0.254	148.7	187.5	177.6	177.6	160.7	212.8	0.94	1.00	1.00	1.00	1.00	1.00	0.314087	1.000000	-
Rv2731	-	8	133.5	94.6	138.5	130.8	117.9	143.3	-0.051	-0.526	0.000	-0.080	-0.224	0.047	133.5	94.6	138.5	130.8	117.9	143.3	1.00	1.00	1.00	1.00	1.00	1.00	0.627510	1.000000	-
Rv2732c	-	6	156.4	183.8	155.4	145.6	168.8	188.3	0.009	0.235	0.000	-0.092	0.116	0.269	201.1	275.6	186.5	218.3	168.8	282.5	0.78	0.67	0.83	0.67	1.00	0.67	0.262110	1.000000	-
Rv2733c	-	16	261.3	248.9	194.4	190.0	176.3	220.4	0.417	0.349	0.000	-0.032	-0.137	0.177	285.0	265.5	214.5	194.0	188.1	235.1	0.92	0.94	0.91	0.98	0.94	0.94	0.646795	1.000000	-
Rv2734	-	21	33.6	38.1	30.2	37.4	46.3	34.0	0.131	0.291	0.000	0.266	0.541	0.146	58.8	55.2	48.8	60.4	67.0	44.6	0.57	0.69	0.62	0.62	0.69	0.76	0.640963	1.000000	-
Rv2735c	-	28	99.3	107.6	113.0	103.3	111.4	110.4	-0.179	-0.068	0.000	-0.123	-0.020	-0.032	126.3	120.5	129.1	129.5	127.3	118.9	0.79	0.89	0.88	0.80	0.88	0.93	0.708116	1.000000	-
Rv2736c	recX	6	96.9	80.7	103.3	136.0	98.6	73.5	-0.087	-0.337	0.000	0.381	-0.064	-0.465	109.1	107.6	112.7	136.0	98.6	97.9	0.89	0.75	0.92	1.00	1.00	0.75	0.192448	1.000000	-
Rv2737c	recA	28	192.4	218.0	199.4	198.0	195.2	204.9	-0.050	0.126	0.000	-0.010	-0.030	0.038	204.6	226.1	214.7	205.3	202.4	208.6	0.94	0.96	0.93	0.96	0.96	0.98	0.982247	1.000000	-
Rv2737A	-	3	26.6	35.6	39.8	51.7	67.4	52.5	-0.502	-0.140	0.000	0.341	0.694	0.360	34.2	53.5	59.7	51.7	67.4	78.7	0.78	0.67	0.67	1.00	1.00	0.67	0.102324	0.747565	-
Rv2738c	-	3	188.2	179.0	223.6	221.4	254.8	165.7	-0.243	-0.314	0.000	-0.014	0.184	-0.421	188.2	179.0	223.6	221.4	382.1	331.5	1.00	1.00	1.00	1.00	0.67	0.50	0.054738	0.502336	-
Rv2739c	-	5	79.0	77.2	106.1	72.4	81.6	104.8	-0.402	-0.434	0.000	-0.521	-0.360	-0.017	91.2	85.8	132.6	98.8	90.6	149.7	0.87	0.90	0.80	0.73	0.90	0.70	0.845470	1.000000	-
Rv2740	-	5	260.3	236.3	260.6	272.3	229.5	314.8	-0.001	-0.138	0.000	0.062	-0.179	0.268	260.3	236.3	260.6	272.3	229.5	314.8	1.00	1.00	1.00	1.00	1.00	1.00	0.913178	1.000000	-
Rv2741	PE_PGRS47	22	210.2	184.9	225.1	202.2	200.0	188.9	-0.096	-0.277	0.000	-0.151	-0.167	-0.247	247.8	203.4	247.6	234.2	231.6	207.8	0.85	0.91	0.91	0.86	0.86	0.91	0.990454	1.000000	-
Rv2742c	-	15	255.6	238.1	224.0	230.4	230.3	202.8	0.187	0.086	0.000	0.040	0.039	-0.140	255.6	238.1	224.0	230.4	230.3	202.8	1.00	1.00	1.00	1.00	1.00	1.00	0.833778	1.000000	-
Rv2743c	-	12	288.7	267.9	222.6	278.6	277.8	219.5	0.367	0.262	0.000	0.317	0.313	-0.020	305.6	292.2	232.3	313.5	303.0	263.4	0.94	0.92	0.96	0.89	0.92	0.83	0.798074	1.000000	-
Rv2744c	35kd_ag	5	127.4	125.5	138.0	123.4	163.8	128.1	-0.111	-0.132	0.000	-0.155	0.239	-0.103	147.0	139.4	172.5	185.1	182.0	160.1	0.87	0.90	0.80	0.67	0.90	0.80	0.944378	1.000000	-
Rv2745c	-	2	341.5	280.7	326.0	411.1	397.4	392.9	0.066	-0.212	0.000	0.330	0.282	0.266	341.5	280.7	326.0	411.1	397.4	392.9	1.00	1.00	1.00	1.00	1.00	1.00	0.960622	1.000000	-
Rv2746c	pgsA3	13	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2747	-	7	20.7	36.3	15.2	57.5	49.0	36.2	0.348	1.036	0.000	1.632	1.421	1.031	31.0	46.2	35.4	67.0	49.0	42.2	0.67	0.79	0.43	0.86	1.00	0.86	0.003773	0.062190	-
Rv2748c	ftsK	27	4.0	4.3	3.5	4.7	5.2	5.6	0.096	0.142	0.000	0.199	0.272	0.321	32.8	39.1	37.4	42.4	35.2	43.0	0.12	0.11	0.09	0.11	0.15	0.13	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2749	-	3	234.0	182.1	241.8	210.6	220.1	180.3	-0.046	-0.399	0.000	-0.195	-0.133	-0.413	234.0	182.1	241.8	210.6	220.1	180.3	1.00	1.00	1.00	1.00	1.00	1.00	0.978495	1.000000	-
Rv2750	-	12	51.3	40.3	59.7	53.2	55.5	62.7	-0.201	-0.515	0.000	-0.152	-0.096	0.067	73.8	56.8	79.6	73.7	74.0	79.3	0.69	0.71	0.75	0.72	0.75	0.79	0.991193	1.000000	-
Rv2751	-	21	49.2	42.3	53.6	52.4	47.1	44.7	-0.112	-0.310	0.000	-0.031	-0.169	-0.239	72.1	46.7	70.4	62.3	58.2	50.7	0.68	0.90	0.76	0.84	0.81	0.88	0.164996	0.994969	-
Rv2752c	-	17	50.8	33.0	39.9	36.3	33.4	42.7	0.313	-0.242	0.000	-0.120	-0.227	0.086	72.0	48.7	56.5	50.1	54.0	63.1	0.71	0.68	0.71	0.73	0.62	0.68	0.520499	1.000000	-
Rv2753c	dapA	9	0.0	0.0	0.0	0.0	0.0	0.6	0.000	0.000	0.000	0.000	0.000	0.164	0.0	0.0	0.0	0.0	0.0	10.8	0.00	0.00	0.00	0.00	0.00	0.06	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2754c	thyX	9	44.4	39.7	66.0	103.4	128.9	44.0	-0.521	-0.666	0.000	0.612	0.916	-0.535	52.2	42.1	66.0	103.4	136.5	46.6	0.85	0.94	1.00	1.00	0.94	0.94	0.000000	0.000002	-
Rv2755c	hsdS.1	7	9.6	11.7	8.9	9.2	11.7	14.1	0.072	0.259	0.000	0.026	0.266	0.458	22.5	16.3	20.8	16.1	18.3	15.2	0.43	0.71	0.43	0.57	0.64	0.93	0.158031	0.973064	-
Rv2756c	hsdM	36	86.3	72.6	82.0	68.4	56.7	72.0	0.070	-0.165	0.000	-0.246	-0.496	-0.177	108.4	81.7	101.8	83.0	72.9	81.0	0.80	0.89	0.81	0.82	0.78	0.89	0.335218	1.000000	-
Rv2757c	-	7	54.9	72.9	94.4	32.4	28.4	22.7	-0.732	-0.352	0.000	-1.412	-1.576	-1.842	72.0	113.4	110.2	45.3	44.1	39.8	0.76	0.64	0.86	0.71	0.64	0.57	0.006838	0.101420	-
Rv2758c	-	4	31.5	52.2	39.1	52.7	49.0	34.1	-0.275	0.375	0.000	0.385	0.289	-0.176	37.8	69.7	52.2	52.7	49.0	38.9	0.83	0.75	0.75	1.00	1.00	0.88	0.330895	1.000000	-
Rv2759c	-	7	147.2	120.7	113.5	115.8	134.6	138.1	0.361	0.085	0.000	0.028	0.237	0.273	162.7	120.7	122.2	115.8	134.6	138.1	0.90	1.00	0.93	1.00	1.00	1.00	0.766753	1.000000	-
Rv2760c	-	1	417.6	349.9	297.0	418.4	459.1	370.2	0.485	0.233	0.000	0.487	0.620	0.313	417.6	349.9	297.0	418.4	459.1	370.2	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2761c	hsdS	21	102.0	93.0	119.9	112.9	101.1	104.7	-0.223	-0.350	0.000	-0.083	-0.234	-0.186	128.5	111.6	132.5	134.2	114.8	122.2	0.79	0.83	0.90	0.84	0.88	0.86	0.954420	1.000000	-
Rv2762c	-	4	174.9	153.1	154.5	173.2	138.8	175.9	0.174	-0.013	0.000	0.159	-0.150	0.182	174.9	153.1	154.5	173.2	138.8	175.9	1.00	1.00	1.00	1.00	1.00	1.00	0.886633	1.000000	-
Rv2763c	dfrA	7	0.0	1.4	0.0	0.0	0.0	0.0	0.000	0.361	0.000	0.000	0.000	0.000	0.0	19.9	0.0	0.0	0.0	0.0	0.00	0.07	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2764c	thyA	19	1.1	2.7	0.0	0.0	0.0	1.3	0.282	0.619	0.000	0.000	0.000	0.344	20.5	11.3	0.0	0.0	0.0	10.2	0.05	0.24	0.00	0.00	0.00	0.13	0.000011	0.000351	-
Rv2765	-	13	99.1	95.9	79.3	83.8	89.0	112.5	0.304	0.259	0.000	0.076	0.157	0.478	107.4	108.4	85.9	102.2	89.0	121.8	0.92	0.88	0.92	0.82	1.00	0.92	0.271774	1.000000	-
Rv2766c	fabG	5	344.9	354.9	299.9	396.5	373.5	302.8	0.199	0.239	0.000	0.397	0.312	0.014	344.9	354.9	299.9	396.5	373.5	302.8	1.00	1.00	1.00	1.00	1.00	1.00	0.824700	1.000000	-
Rv2767c	-	9	30.3	29.9	43.3	40.8	37.6	40.1	-0.452	-0.470	0.000	-0.077	-0.183	-0.099	45.5	35.9	60.0	50.1	45.1	51.6	0.67	0.83	0.72	0.81	0.83	0.78	0.890019	1.000000	-
Rv2768c	PPE43	14	58.9	58.9	55.3	67.6	55.6	78.0	0.084	0.083	0.000	0.267	0.005	0.460	75.0	71.7	70.4	83.5	67.6	91.0	0.79	0.82	0.79	0.81	0.82	0.86	0.991933	1.000000	-
Rv2769c	PE27	15	122.6	124.6	130.3	114.5	124.1	137.3	-0.084	-0.062	0.000	-0.179	-0.068	0.073	131.4	143.8	139.6	132.1	133.0	152.6	0.93	0.87	0.93	0.87	0.93	0.90	0.937251	1.000000	-
Rv2770c	PPE44	12	257.7	233.0	254.2	257.2	238.5	240.5	0.019	-0.124	0.000	0.017	-0.090	-0.079	299.3	233.0	277.3	308.7	260.2	288.6	0.86	1.00	0.92	0.83	0.92	0.83	0.478000	1.000000	-
Rv2771c	-	8	198.6	176.7	213.1	199.2	189.7	214.8	-0.100	-0.264	0.000	-0.095	-0.163	0.011	216.6	235.6	243.6	227.6	202.4	214.8	0.92	0.75	0.88	0.88	0.94	1.00	0.721889	1.000000	-
Rv2772c	-	9	216.0	251.0	212.9	238.9	254.1	194.9	0.021	0.233	0.000	0.163	0.250	-0.124	216.0	251.0	212.9	238.9	269.1	194.9	1.00	1.00	1.00	1.00	0.94	1.00	0.665991	1.000000	-
Rv2773c	dapB	9	9.4	12.4	7.6	13.7	11.5	13.2	0.187	0.459	0.000	0.567	0.386	0.525	23.1	22.3	27.5	30.9	20.8	19.8	0.41	0.56	0.28	0.44	0.56	0.67	0.606626	1.000000	-
Rv2774c	-	3	98.1	86.9	82.2	73.3	66.8	84.1	0.242	0.076	0.000	-0.156	-0.281	0.031	98.1	86.9	98.6	73.3	66.8	84.1	1.00	1.00	0.83	1.00	1.00	1.00	0.926377	1.000000	-
Rv2775	-	10	51.0	54.8	45.9	53.9	54.5	65.2	0.139	0.233	0.000	0.210	0.227	0.464	69.6	60.9	61.2	70.3	64.2	76.7	0.73	0.90	0.75	0.77	0.85	0.85	0.963768	1.000000	-
Rv2776c	-	13	107.9	110.1	89.5	96.3	115.4	105.1	0.257	0.284	0.000	0.101	0.350	0.220	123.8	119.2	105.8	110.5	125.0	124.2	0.87	0.92	0.85	0.87	0.92	0.85	0.972447	1.000000	-
Rv2777c	-	20	118.5	115.6	110.1	120.2	123.9	142.8	0.101	0.067	0.000	0.121	0.164	0.361	124.7	128.4	125.8	126.5	137.7	154.4	0.95	0.90	0.88	0.95	0.90	0.93	0.423161	1.000000	-
Rv2778c	-	9	120.1	162.1	109.9	158.8	127.3	167.6	0.122	0.540	0.000	0.512	0.203	0.587	124.7	182.3	123.7	204.2	163.7	188.6	0.96	0.89	0.89	0.78	0.78	0.89	0.040143	0.408330	-
Rv2779c	-	6	61.5	70.5	76.0	70.0	64.1	65.7	-0.285	-0.102	0.000	-0.110	-0.230	-0.195	110.7	140.9	182.4	140.1	128.1	131.5	0.56	0.50	0.42	0.50	0.50	0.50	0.960241	1.000000	-
Rv2780	ald	24	95.7	97.7	100.1	89.2	79.1	107.5	-0.061	-0.034	0.000	-0.158	-0.322	0.098	109.4	106.5	111.7	100.3	92.6	120.0	0.88	0.92	0.90	0.89	0.85	0.90	0.936605	1.000000	-
Rv2781c	-	18	159.4	175.2	228.2	196.7	176.5	219.6	-0.504	-0.372	0.000	-0.209	-0.361	-0.054	200.2	225.2	256.7	212.4	186.9	225.8	0.80	0.78	0.89	0.93	0.94	0.97	0.181116	1.000000	-
Rv2782c	pepR	12	117.9	120.0	104.2	104.0	113.3	112.6	0.170	0.195	0.000	-0.003	0.115	0.106	157.2	130.9	119.1	117.0	129.5	128.7	0.75	0.92	0.88	0.89	0.88	0.88	0.891959	1.000000	-
Rv2783c	gpsI	18	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2784c	lppU	6	73.9	90.2	90.7	81.6	82.1	101.7	-0.278	-0.007	0.000	-0.144	-0.136	0.158	78.3	90.2	98.9	86.4	89.6	111.0	0.94	1.00	0.92	0.94	0.92	0.92	0.979702	1.000000	-
Rv2785c	rpsO	4	48.1	21.7	13.3	31.8	21.9	25.3	1.534	0.541	0.000	1.005	0.553	0.726	115.4	43.4	35.6	63.6	43.8	50.7	0.42	0.50	0.38	0.50	0.50	0.50	0.651994	1.000000	-
Rv2786c	ribF	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2787	-	21	134.5	137.1	140.0	139.2	143.2	150.1	-0.056	-0.029	0.000	-0.008	0.032	0.097	148.7	151.5	154.7	153.8	154.3	150.1	0.90	0.90	0.90	0.90	0.93	1.00	0.716434	1.000000	-
Rv2788	sirR	6	77.6	89.3	92.5	112.8	71.2	95.9	-0.240	-0.048	0.000	0.273	-0.356	0.049	82.1	89.3	111.0	119.4	77.7	95.9	0.94	1.00	0.83	0.94	0.92	1.00	0.436337	1.000000	-
Rv2789c	fadE21	14	31.2	38.1	31.0	25.8	35.4	31.7	0.009	0.260	0.000	-0.227	0.165	0.026	54.7	50.8	51.1	40.1	45.0	42.2	0.57	0.75	0.61	0.64	0.79	0.75	0.868428	1.000000	-
Rv2790c	ltp1	20	63.8	63.8	86.9	80.4	71.9	69.0	-0.418	-0.417	0.000	-0.107	-0.256	-0.313	109.3	79.8	102.2	96.4	95.9	83.6	0.58	0.80	0.85	0.83	0.75	0.82	0.161455	0.985656	-
Rv2791c	-	17	95.1	83.8	128.3	99.5	101.2	83.7	-0.413	-0.586	0.000	-0.351	-0.327	-0.588	134.7	105.5	167.7	133.5	132.3	94.8	0.71	0.79	0.76	0.75	0.76	0.88	0.676869	1.000000	-
Rv2792c	-	6	100.6	99.8	90.0	77.2	133.0	118.5	0.152	0.141	0.000	-0.210	0.538	0.378	100.6	108.9	98.2	86.8	145.1	129.3	1.00	0.92	0.92	0.89	0.92	0.92	0.356346	1.000000	-
Rv2793c	truB	8	96.7	89.8	134.0	112.3	61.2	84.5	-0.450	-0.552	0.000	-0.244	-1.070	-0.635	136.5	159.6	194.9	245.1	97.9	112.7	0.71	0.56	0.69	0.46	0.62	0.75	0.363765	1.000000	-
Rv2794c	-	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2795c	-	16	33.3	27.6	32.2	31.8	37.0	37.6	0.041	-0.187	0.000	-0.016	0.175	0.196	51.5	49.2	54.2	46.2	53.8	60.2	0.65	0.56	0.59	0.69	0.69	0.62	0.910279	1.000000	-
Rv2796c	lppV	5	51.7	30.5	56.6	50.6	53.5	42.4	-0.121	-0.795	0.000	-0.148	-0.077	-0.379	59.6	38.2	70.8	63.3	59.4	47.1	0.87	0.80	0.80	0.80	0.90	0.90	0.861420	1.000000	-
Rv2797c	-	22	300.9	273.1	262.2	269.1	258.6	260.2	0.195	0.058	0.000	0.037	-0.020	-0.011	315.2	273.1	274.7	286.4	258.6	266.2	0.95	1.00	0.95	0.94	1.00	0.98	0.702067	1.000000	-
Rv2798c	-	3	167.2	193.6	243.9	208.5	143.4	183.3	-0.532	-0.326	0.000	-0.221	-0.746	-0.402	167.2	290.4	243.9	234.6	215.1	183.3	1.00	0.67	1.00	0.89	0.67	1.00	0.223204	1.000000	-
Rv2799	-	10	199.9	282.9	198.6	419.5	397.6	238.5	0.009	0.500	0.000	1.060	0.984	0.259	214.2	282.9	198.6	419.5	397.6	251.1	0.93	1.00	1.00	1.00	1.00	0.95	0.017688	0.213861	-
Rv2800	-	17	167.7	214.9	212.3	186.8	174.0	191.6	-0.332	0.017	0.000	-0.180	-0.280	-0.145	182.0	221.4	212.3	198.5	184.9	197.4	0.92	0.97	1.00	0.94	0.94	0.97	0.734822	1.000000	-
Rv2801c	-	4	149.3	164.4	212.2	173.0	160.4	199.5	-0.494	-0.358	0.000	-0.288	-0.393	-0.087	149.3	164.4	212.2	173.0	160.4	199.5	1.00	1.00	1.00	1.00	1.00	1.00	0.817739	1.000000	-
Rv2802c	-	8	289.6	357.3	238.9	286.4	264.6	297.9	0.272	0.571	0.000	0.256	0.144	0.312	289.6	357.3	238.9	286.4	264.6	297.9	1.00	1.00	1.00	1.00	1.00	1.00	0.749641	1.000000	-
Rv2803	-	6	429.8	383.1	450.1	357.8	366.3	430.7	-0.066	-0.230	0.000	-0.327	-0.294	-0.063	429.8	383.1	450.1	357.8	366.3	430.7	1.00	1.00	1.00	1.00	1.00	1.00	0.399379	1.000000	-
Rv2804c	-	6	120.2	129.9	160.0	166.5	127.4	125.1	-0.398	-0.290	0.000	0.056	-0.318	-0.343	120.2	129.9	160.0	166.5	127.4	125.1	1.00	1.00	1.00	1.00	1.00	1.00	0.893619	1.000000	-
Rv2805	-	3	162.3	205.1	221.2	236.8	218.4	236.4	-0.435	-0.107	0.000	0.097	-0.018	0.094	162.3	205.1	221.2	236.8	218.4	236.4	1.00	1.00	1.00	1.00	1.00	1.00	0.828862	1.000000	-
Rv2806	-	7	266.4	187.2	191.0	190.4	197.4	215.6	0.470	-0.028	0.000	-0.005	0.046	0.170	310.9	218.4	222.9	266.5	230.3	251.5	0.86	0.86	0.86	0.71	0.86	0.86	0.955212	1.000000	-
Rv2807	-	11	86.0	93.3	90.8	94.5	91.2	91.0	-0.075	0.037	0.000	0.054	0.006	0.003	101.3	97.7	111.0	103.9	95.5	91.0	0.85	0.95	0.82	0.91	0.95	1.00	0.714833	1.000000	-
Rv2808	-	7	63.1	47.2	42.4	50.2	54.8	47.4	0.521	0.138	0.000	0.219	0.334	0.143	77.9	47.2	49.5	50.2	54.8	51.0	0.81	1.00	0.86	1.00	1.00	0.93	0.082228	0.666852	-
Rv2809	-	7	57.1	66.5	55.4	43.4	37.0	72.6	0.041	0.244	0.000	-0.318	-0.524	0.362	92.3	93.1	96.9	60.8	57.5	101.6	0.62	0.71	0.57	0.71	0.64	0.71	0.788874	1.000000	-
Rv2810c	-	12	123.8	123.6	127.0	141.4	131.1	123.5	-0.035	-0.038	0.000	0.149	0.044	-0.039	135.1	134.8	132.5	175.5	143.0	141.2	0.92	0.92	0.96	0.81	0.92	0.88	0.711835	1.000000	-
Rv2811	-	2	101.1	53.7	54.5	34.2	37.9	35.1	0.835	-0.019	0.000	-0.601	-0.473	-0.569	101.1	107.4	108.9	68.4	75.7	70.2	1.00	0.50	0.50	0.50	0.50	0.50	0.480638	1.000000	-
Rv2812	-	18	75.6	77.9	87.3	58.4	42.6	55.4	-0.196	-0.156	0.000	-0.542	-0.954	-0.612	90.7	116.8	108.4	90.1	61.4	73.9	0.83	0.67	0.81	0.65	0.69	0.75	0.096314	0.726450	-
Rv2813	-	9	36.9	45.4	63.2	57.3	56.0	55.5	-0.702	-0.438	0.000	-0.131	-0.161	-0.174	62.3	68.1	103.5	103.1	77.6	83.2	0.59	0.67	0.61	0.56	0.72	0.67	0.730576	1.000000	-
Rv2814c	-	21	288.9	291.6	331.4	315.5	285.0	290.4	-0.195	-0.182	0.000	-0.070	-0.214	-0.187	356.8	360.2	421.7	397.6	362.7	321.0	0.81	0.81	0.79	0.79	0.79	0.90	0.925009	1.000000	-
Rv2815c	-	4	201.0	247.0	230.4	235.4	205.9	169.3	-0.193	0.098	0.000	0.030	-0.158	-0.433	201.0	247.0	230.4	235.4	205.9	169.3	1.00	1.00	1.00	1.00	1.00	1.00	0.897585	1.000000	-
Rv2816c	-	14	18.4	17.8	19.1	13.0	13.9	15.0	-0.041	-0.080	0.000	-0.425	-0.351	-0.270	40.8	35.6	35.7	25.9	27.8	23.3	0.45	0.50	0.54	0.50	0.50	0.64	0.527194	1.000000	-
Rv2817c	-	18	24.2	26.2	26.3	24.8	25.3	24.5	-0.099	-0.001	0.000	-0.070	-0.046	-0.085	40.8	42.9	49.7	38.2	41.3	44.0	0.59	0.61	0.53	0.65	0.61	0.56	0.933509	1.000000	-
Rv2818c	-	22	73.1	71.3	87.0	89.2	67.8	44.0	-0.235	-0.271	0.000	0.035	-0.338	-0.910	86.2	82.5	98.1	98.1	78.5	52.3	0.85	0.86	0.89	0.91	0.86	0.84	0.091303	0.704642	-
Rv2819c	-	20	36.2	35.3	37.3	29.0	34.5	41.9	-0.035	-0.069	0.000	-0.314	-0.099	0.152	55.8	45.5	67.7	49.7	40.5	47.9	0.65	0.78	0.55	0.58	0.85	0.88	0.018564	0.222439	-
Rv2820c	-	16	101.6	77.5	70.5	89.7	80.6	85.3	0.498	0.127	0.000	0.328	0.180	0.258	108.4	77.5	86.8	97.9	92.1	97.5	0.94	1.00	0.81	0.92	0.88	0.88	0.245056	1.000000	-
Rv2821c	-	9	65.8	65.6	63.5	79.8	72.9	112.6	0.048	0.044	0.000	0.309	0.187	0.780	74.0	73.8	87.9	93.7	87.5	119.2	0.89	0.89	0.72	0.85	0.83	0.94	0.469418	1.000000	-
Rv2822c	-	13	59.0	64.7	61.6	56.5	66.0	82.0	-0.057	0.064	0.000	-0.116	0.092	0.386	69.8	73.1	76.3	66.8	74.6	97.0	0.85	0.88	0.81	0.85	0.88	0.85	0.759356	1.000000	-
Rv2823c	-	41	87.6	82.9	88.7	80.8	69.8	81.3	-0.017	-0.092	0.000	-0.126	-0.325	-0.118	101.6	89.4	102.4	97.5	81.8	86.6	0.86	0.93	0.87	0.83	0.85	0.94	0.519639	1.000000	-
Rv2824c	-	16	116.9	120.7	122.3	143.9	133.7	143.7	-0.063	-0.019	0.000	0.226	0.124	0.224	127.6	137.9	126.3	150.2	133.7	143.7	0.92	0.88	0.97	0.96	1.00	1.00	0.168054	0.995413	-
Rv2825c	-	5	103.3	87.1	106.9	129.8	96.4	93.6	-0.047	-0.280	0.000	0.269	-0.143	-0.183	129.1	145.2	133.6	162.3	137.7	117.0	0.80	0.60	0.80	0.80	0.70	0.80	0.952509	1.000000	-
Rv2826c	-	11	110.3	120.6	108.9	119.5	114.8	119.2	0.017	0.141	0.000	0.128	0.072	0.125	129.9	139.7	133.1	157.7	126.2	138.0	0.85	0.86	0.82	0.76	0.91	0.86	0.961675	1.000000	-
Rv2827c	-	13	4.9	3.5	3.8	6.1	8.2	9.5	0.161	-0.052	0.000	0.331	0.578	0.711	31.7	15.2	33.2	34.1	42.6	49.2	0.15	0.23	0.12	0.18	0.19	0.19	0.606592	1.000000	-
Rv2828c	-	5	104.5	83.7	112.0	126.6	121.2	99.9	-0.095	-0.400	0.000	0.170	0.110	-0.156	130.6	119.5	139.9	158.2	151.6	124.9	0.80	0.70	0.80	0.80	0.80	0.80	0.992259	1.000000	-
Rv2829c	-	4	67.3	117.7	85.9	118.9	80.9	112.3	-0.331	0.433	0.000	0.447	-0.081	0.369	73.4	134.5	85.9	129.7	80.9	112.3	0.92	0.88	1.00	0.92	1.00	1.00	0.576004	1.000000	-
Rv2830c	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2831	echA16	6	132.3	95.3	110.4	83.6	83.4	74.3	0.250	-0.201	0.000	-0.381	-0.384	-0.542	148.8	127.1	120.4	115.8	91.0	111.4	0.89	0.75	0.92	0.72	0.92	0.67	0.505892	1.000000	-
Rv2832c	ugpC	7	65.2	45.7	50.5	58.3	57.1	82.2	0.340	-0.128	0.000	0.190	0.164	0.652	91.3	64.0	64.2	76.5	80.0	95.9	0.71	0.71	0.79	0.76	0.71	0.86	0.786807	1.000000	-
Rv2833c	ugpB	19	40.0	33.2	42.8	37.1	31.2	37.1	-0.086	-0.325	0.000	-0.185	-0.401	-0.182	61.7	52.5	60.3	50.3	51.6	54.3	0.65	0.63	0.71	0.74	0.61	0.68	0.906263	1.000000	-
Rv2834c	ugpE	6	90.0	77.6	67.7	56.6	85.8	62.3	0.386	0.185	0.000	-0.238	0.322	-0.110	95.3	77.6	81.2	84.9	85.8	62.3	0.94	1.00	0.83	0.67	1.00	1.00	0.062246	0.550688	-
Rv2835c	ugpA	14	73.7	62.2	70.0	58.4	54.1	63.3	0.069	-0.158	0.000	-0.243	-0.345	-0.136	106.8	83.0	81.7	81.8	72.1	77.0	0.69	0.75	0.86	0.71	0.75	0.82	0.781124	1.000000	-
Rv2836c	dinF	21	125.7	108.7	147.7	120.4	119.5	111.9	-0.224	-0.426	0.000	-0.284	-0.295	-0.386	165.0	147.3	200.2	154.8	147.6	146.8	0.76	0.74	0.74	0.78	0.81	0.76	0.997045	1.000000	-
Rv2837c	-	13	18.4	39.9	19.2	23.7	34.5	24.5	-0.048	0.890	0.000	0.244	0.705	0.284	37.8	61.0	62.5	44.0	52.8	33.5	0.49	0.65	0.31	0.54	0.65	0.73	0.051555	0.481747	-
Rv2838c	rbfA	7	56.2	71.3	42.5	59.2	65.1	38.8	0.366	0.685	0.000	0.436	0.563	-0.117	78.6	71.3	54.0	62.2	65.1	45.2	0.71	1.00	0.79	0.95	1.00	0.86	0.048816	0.463773	-
Rv2839c	infB	24	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2840c	-	5	99.3	38.6	61.1	45.8	61.3	46.0	0.658	-0.601	0.000	-0.380	0.005	-0.376	124.1	48.2	76.4	57.3	76.7	57.4	0.80	0.80	0.80	0.80	0.80	0.80	0.423144	1.000000	-
Rv2841c	nusA	12	0.3	0.0	0.0	0.0	0.0	0.0	0.090	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.03	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2842c	-	6	58.7	34.7	53.6	21.0	18.7	22.2	0.119	-0.561	0.000	-1.171	-1.309	-1.108	75.4	37.9	71.5	27.1	37.3	29.6	0.78	0.92	0.75	0.78	0.50	0.75	0.000906	0.018440	-
Rv2843	-	6	38.2	105.5	56.7	87.1	89.9	56.1	-0.514	0.841	0.000	0.578	0.622	-0.012	43.0	126.6	68.0	92.2	107.9	67.4	0.89	0.83	0.83	0.94	0.83	0.83	0.001072	0.021389	-
Rv2844	-	4	88.5	122.2	70.4	126.4	122.6	87.1	0.311	0.754	0.000	0.801	0.759	0.289	88.5	122.2	93.9	126.4	122.6	87.1	1.00	1.00	0.75	1.00	1.00	1.00	0.313448	1.000000	-
Rv2845c	proS	29	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2846c	efpA	28	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2847c	cysG	14	34.7	35.2	32.9	50.2	42.9	27.5	0.068	0.088	0.000	0.544	0.340	-0.222	56.0	47.0	57.5	72.7	54.6	42.7	0.62	0.75	0.57	0.69	0.79	0.64	0.679945	1.000000	-
Rv2848c	cobB	22	181.9	173.1	178.1	171.2	163.6	160.2	0.030	-0.040	0.000	-0.055	-0.119	-0.148	230.8	190.4	200.9	179.4	175.5	176.2	0.79	0.91	0.89	0.95	0.93	0.91	0.407102	1.000000	-
Rv2849c	cobO	6	123.7	101.3	86.6	87.4	88.8	82.7	0.491	0.214	0.000	0.012	0.035	-0.063	159.0	110.5	115.5	104.9	96.9	82.7	0.78	0.92	0.75	0.83	0.92	1.00	0.681273	1.000000	-
Rv2850c	-	14	102.4	79.2	66.8	89.0	97.5	82.7	0.581	0.231	0.000	0.389	0.514	0.289	113.1	92.5	77.9	101.0	97.5	89.1	0.90	0.86	0.86	0.88	1.00	0.93	0.459959	1.000000	-
Rv2851c	-	8	151.0	108.4	118.5	131.6	134.9	128.3	0.336	-0.123	0.000	0.145	0.179	0.109	190.7	123.9	135.5	150.4	134.9	128.3	0.79	0.88	0.88	0.88	1.00	1.00	0.453626	1.000000	-
Rv2852c	mqo	19	142.9	128.8	104.0	120.2	128.3	108.0	0.440	0.295	0.000	0.200	0.290	0.051	166.2	148.3	127.5	134.4	147.7	128.2	0.86	0.87	0.82	0.89	0.87	0.84	0.969691	1.000000	-
Rv2853	PE_PGRS48	31	153.3	181.2	167.0	167.8	176.1	165.5	-0.119	0.114	0.000	0.007	0.075	-0.012	167.7	193.7	195.3	181.5	185.1	176.9	0.91	0.94	0.85	0.92	0.95	0.94	0.824618	1.000000	-
Rv2854	-	16	91.9	92.8	96.6	82.7	92.4	94.9	-0.068	-0.054	0.000	-0.212	-0.061	-0.024	116.1	118.8	134.4	104.4	109.5	116.8	0.79	0.78	0.72	0.79	0.84	0.81	0.995246	1.000000	-
Rv2855	mtr	27	43.6	36.7	41.3	38.5	41.9	29.6	0.071	-0.151	0.000	-0.089	0.019	-0.418	65.4	55.0	58.7	57.7	50.3	51.6	0.67	0.67	0.70	0.67	0.83	0.57	0.337904	1.000000	-
Rv2856	nicT	14	66.9	52.7	48.9	51.4	59.0	71.0	0.417	0.098	0.000	0.067	0.249	0.496	74.0	70.2	65.2	63.5	63.6	90.3	0.90	0.75	0.75	0.81	0.93	0.79	0.333927	1.000000	-
Rv2857c	-	11	59.1	52.8	48.9	46.5	40.7	41.4	0.251	0.101	0.000	-0.067	-0.239	-0.216	88.7	64.5	67.2	61.3	52.6	50.6	0.67	0.82	0.73	0.76	0.77	0.82	0.868764	1.000000	-
Rv2858c	aldC	12	48.5	47.4	71.3	65.1	64.9	41.6	-0.512	-0.543	0.000	-0.122	-0.127	-0.712	76.0	71.1	85.6	80.9	97.4	55.5	0.64	0.67	0.83	0.81	0.67	0.75	0.429133	1.000000	-
Rv2859c	-	15	85.7	104.0	126.5	111.9	107.9	96.8	-0.536	-0.271	0.000	-0.170	-0.220	-0.369	98.9	120.0	146.0	136.1	115.6	100.2	0.87	0.87	0.87	0.82	0.93	0.97	0.354281	1.000000	-
Rv2860c	glnA4	30	65.1	69.6	83.4	64.6	75.4	77.1	-0.334	-0.245	0.000	-0.344	-0.137	-0.107	87.4	81.8	94.4	76.5	87.0	94.4	0.74	0.85	0.88	0.84	0.87	0.82	0.467556	1.000000	-
Rv2861c	mapB	11	7.9	13.4	2.3	13.9	25.8	13.2	0.818	1.333	0.000	1.376	2.076	1.318	21.6	29.4	12.6	23.0	33.3	18.1	0.36	0.45	0.18	0.61	0.77	0.73	0.000121	0.003086	-
Rv2862c	-	5	361.7	348.7	314.7	248.1	231.5	257.5	0.198	0.146	0.000	-0.337	-0.435	-0.284	361.7	348.7	314.7	286.2	289.4	257.5	1.00	1.00	1.00	0.87	0.80	1.00	0.390585	1.000000	-
Rv2863	-	3	308.0	326.2	301.3	383.6	299.2	291.9	0.031	0.113	0.000	0.344	-0.010	-0.045	308.0	326.2	301.3	383.6	299.2	291.9	1.00	1.00	1.00	1.00	1.00	1.00	0.506978	1.000000	-
Rv2864c	-	18	158.8	178.5	192.5	198.6	185.9	210.7	-0.270	-0.106	0.000	0.044	-0.049	0.128	209.2	200.8	231.0	238.3	202.8	229.9	0.76	0.89	0.83	0.83	0.92	0.92	0.851349	1.000000	-
Rv2865	-	2	191.0	236.6	182.9	199.8	180.1	217.4	0.061	0.362	0.000	0.124	-0.022	0.243	191.0	236.6	182.9	199.8	180.1	217.4	1.00	1.00	1.00	1.00	1.00	1.00	0.932987	1.000000	-
Rv2866	-	3	423.7	393.4	436.2	395.8	360.9	334.2	-0.041	-0.147	0.000	-0.138	-0.270	-0.379	423.7	393.4	436.2	395.8	360.9	334.2	1.00	1.00	1.00	1.00	1.00	1.00	0.580695	1.000000	-
Rv2867c	-	11	121.1	164.2	123.8	104.8	100.2	149.1	-0.031	0.393	0.000	-0.230	-0.292	0.259	142.7	200.7	151.3	128.1	122.5	193.0	0.85	0.82	0.82	0.82	0.82	0.77	0.672584	1.000000	-
Rv2868c	ispG	11	0.7	0.0	0.0	0.0	0.0	0.0	0.185	0.000	0.000	0.000	0.000	0.000	22.6	0.0	0.0	0.0	0.0	0.0	0.03	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2869c	-	18	86.6	84.2	97.9	35.1	69.7	88.2	-0.169	-0.207	0.000	-1.360	-0.463	-0.144	103.9	91.9	117.5	52.7	73.8	93.4	0.83	0.92	0.83	0.67	0.94	0.94	0.000374	0.008379	-
Rv2870c	dxr	14	11.2	20.7	15.2	16.4	15.3	20.0	-0.321	0.350	0.000	0.081	0.006	0.308	93.8	145.2	106.4	114.6	107.0	140.1	0.12	0.14	0.14	0.14	0.14	0.14	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2871	-	7	27.7	23.3	29.1	24.0	24.8	28.7	-0.060	-0.269	0.000	-0.233	-0.192	-0.015	72.7	54.3	81.4	72.0	69.6	100.6	0.38	0.43	0.36	0.33	0.36	0.29	0.986947	1.000000	-
Rv2872	-	10	131.4	149.6	116.4	120.9	111.7	127.1	0.167	0.349	0.000	0.052	-0.057	0.122	146.0	149.6	122.5	125.1	117.6	133.8	0.90	1.00	0.95	0.97	0.95	0.95	0.939799	1.000000	-
Rv2873	mpt83	12	134.1	129.6	106.1	126.1	106.1	106.9	0.324	0.277	0.000	0.238	0.000	0.010	150.9	141.4	121.3	126.1	115.8	116.6	0.89	0.92	0.88	1.00	0.92	0.92	0.714794	1.000000	-
Rv2874	dipZ	42	58.0	48.1	49.8	52.2	63.4	57.1	0.202	-0.045	0.000	0.063	0.319	0.179	73.1	58.6	60.6	65.2	69.1	62.3	0.79	0.82	0.82	0.80	0.92	0.92	0.196937	1.000000	-
Rv2875	mpt70	10	77.3	74.1	76.2	69.0	59.5	67.2	0.019	-0.037	0.000	-0.134	-0.332	-0.168	96.6	82.3	89.6	86.2	70.0	84.0	0.80	0.90	0.85	0.80	0.85	0.80	0.992545	1.000000	-
Rv2876	-	1	7.5	10.2	0.0	9.3	26.2	9.4	1.326	1.604	0.000	1.513	2.642	1.526	22.6	10.2	0.0	13.9	26.2	18.8	0.33	1.00	0.00	0.67	1.00	0.50	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2877c	-	19	185.5	168.6	172.0	192.7	165.5	160.3	0.106	-0.028	0.000	0.159	-0.054	-0.098	199.5	183.1	198.1	203.4	190.6	174.1	0.93	0.92	0.87	0.95	0.87	0.92	0.963297	1.000000	-
Rv2878c	mpt53	7	163.2	142.6	156.9	168.3	168.2	146.6	0.055	-0.134	0.000	0.098	0.098	-0.095	171.4	142.6	156.9	168.3	168.2	146.6	0.95	1.00	1.00	1.00	1.00	1.00	0.957621	1.000000	-
Rv2879c	-	9	314.1	293.4	279.7	288.3	238.9	272.5	0.165	0.068	0.000	0.043	-0.223	-0.037	314.1	293.4	279.7	288.3	238.9	272.5	1.00	1.00	1.00	1.00	1.00	1.00	0.841707	1.000000	-
Rv2880c	-	12	264.3	266.2	230.1	251.7	213.2	227.5	0.196	0.206	0.000	0.126	-0.108	-0.016	271.8	290.4	251.1	266.5	232.6	248.2	0.97	0.92	0.92	0.94	0.92	0.92	0.984913	1.000000	-
Rv2881c	cdsA	10	18.0	22.9	20.9	19.8	22.3	16.6	-0.168	0.111	0.000	-0.061	0.077	-0.259	108.2	229.3	208.7	198.0	222.8	166.1	0.17	0.10	0.10	0.10	0.10	0.10	0.700077	1.000000	-
Rv2882c	frr	16	3.5	3.5	2.2	2.6	3.6	1.9	0.250	0.246	0.000	0.088	0.259	-0.053	56.1	37.2	34.4	41.7	38.0	20.2	0.06	0.09	0.06	0.06	0.09	0.09	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2883c	pyrH	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2884	-	12	216.4	219.3	204.0	241.6	206.2	195.2	0.084	0.102	0.000	0.239	0.015	-0.062	243.5	228.8	244.8	263.5	215.2	195.2	0.89	0.96	0.83	0.92	0.96	1.00	0.728358	1.000000	-
Rv2885c	-	16	118.5	130.3	114.3	116.5	106.9	118.3	0.050	0.181	0.000	0.026	-0.093	0.047	123.7	130.3	122.0	116.5	110.3	130.5	0.96	1.00	0.94	1.00	0.97	0.91	0.434386	1.000000	-
Rv2886c	-	18	118.6	112.8	88.5	114.9	118.7	119.0	0.403	0.333	0.000	0.359	0.404	0.408	142.4	116.0	102.8	126.7	118.7	133.9	0.83	0.97	0.86	0.91	1.00	0.89	0.166385	0.995413	-
Rv2887	-	7	106.2	109.1	90.2	95.2	95.8	93.9	0.224	0.262	0.000	0.074	0.082	0.055	111.5	127.3	114.8	111.1	111.8	109.5	0.95	0.86	0.79	0.86	0.86	0.86	0.970738	1.000000	-
Rv2888c	amiC	29	183.6	196.0	190.7	173.6	176.7	193.3	-0.053	0.039	0.000	-0.132	-0.107	0.019	197.3	210.6	208.7	184.2	176.7	203.9	0.93	0.93	0.91	0.94	1.00	0.95	0.569571	1.000000	-
Rv2889c	tsf	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2890c	rpsB	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2891	-	12	153.0	184.3	180.6	172.0	197.6	189.1	-0.232	0.029	0.000	-0.068	0.127	0.065	162.0	192.3	206.3	193.6	197.6	189.1	0.94	0.96	0.88	0.89	1.00	1.00	0.381953	1.000000	-
Rv2892c	PPE45	18	171.4	162.2	163.4	169.7	154.9	186.4	0.067	-0.010	0.000	0.053	-0.075	0.184	188.9	182.5	178.3	176.2	154.9	209.6	0.91	0.89	0.92	0.96	1.00	0.89	0.595447	1.000000	-
Rv2893	-	7	255.4	248.2	274.3	267.9	236.1	252.8	-0.101	-0.141	0.000	-0.033	-0.212	-0.115	298.0	289.6	295.4	267.9	275.5	295.0	0.86	0.86	0.93	1.00	0.86	0.86	0.801061	1.000000	-
Rv2894c	xerC	11	98.6	112.7	115.7	139.4	114.7	131.3	-0.220	-0.036	0.000	0.259	-0.011	0.176	125.1	137.8	141.4	158.6	140.2	144.5	0.79	0.82	0.82	0.88	0.82	0.91	0.959528	1.000000	-
Rv2895c	viuB	11	197.8	193.3	184.5	188.5	183.6	213.2	0.097	0.065	0.000	0.030	-0.007	0.203	217.6	202.5	225.5	200.7	202.0	234.5	0.91	0.95	0.82	0.94	0.91	0.91	0.980784	1.000000	-
Rv2896c	-	17	191.8	157.3	168.1	181.9	191.9	167.5	0.185	-0.093	0.000	0.111	0.186	-0.005	212.6	184.4	190.5	206.1	210.4	189.8	0.90	0.85	0.88	0.88	0.91	0.88	0.995938	1.000000	-
Rv2897c	-	11	74.0	88.8	81.4	95.2	82.2	83.3	-0.129	0.118	0.000	0.213	0.014	0.030	90.5	102.8	94.3	104.7	100.5	114.5	0.82	0.86	0.86	0.91	0.82	0.73	0.765331	1.000000	-
Rv2898c	-	4	23.4	20.6	45.1	24.4	26.9	29.7	-0.819	-0.972	0.000	-0.770	-0.655	-0.532	40.2	32.9	45.1	32.5	30.7	33.9	0.58	0.62	1.00	0.75	0.88	0.88	0.479466	1.000000	-
Rv2899c	fdhD	11	72.6	71.7	117.4	80.2	71.5	92.6	-0.658	-0.674	0.000	-0.523	-0.678	-0.326	126.1	98.6	152.0	120.3	143.0	113.2	0.58	0.73	0.77	0.67	0.50	0.82	0.387182	1.000000	-
Rv2900c	fdhF	27	130.4	104.1	118.7	117.4	108.3	119.6	0.130	-0.182	0.000	-0.015	-0.126	0.010	160.0	127.7	152.6	137.8	130.0	143.5	0.81	0.81	0.78	0.85	0.83	0.83	0.995314	1.000000	-
Rv2901c	-	9	34.3	23.7	29.6	25.3	33.1	39.5	0.181	-0.272	0.000	-0.193	0.137	0.363	42.1	30.4	53.3	29.7	37.2	41.9	0.81	0.78	0.56	0.85	0.89	0.94	0.103131	0.749765	-
Rv2902c	rnhB	10	142.1	142.5	131.2	133.0	149.8	128.4	0.111	0.115	0.000	0.019	0.184	-0.031	147.0	158.4	131.2	147.8	157.7	135.1	0.97	0.90	1.00	0.90	0.95	0.95	0.836066	1.000000	-
Rv2903c	lepB	12	0.3	0.0	0.0	0.0	0.4	0.0	0.090	0.000	0.000	0.000	0.104	0.000	11.6	0.0	0.0	0.0	9.0	0.0	0.03	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2904c	rplS	4	17.3	11.4	6.3	11.7	17.4	5.1	0.981	0.540	0.000	0.558	0.983	-0.169	34.7	22.9	25.2	28.0	34.7	13.5	0.50	0.50	0.25	0.42	0.50	0.38	0.583680	1.000000	-
Rv2905	lppW	16	123.9	106.6	106.6	124.8	124.5	113.7	0.208	-0.000	0.000	0.218	0.214	0.089	132.1	110.0	126.3	136.2	137.3	145.5	0.94	0.97	0.84	0.92	0.91	0.78	0.405318	1.000000	-
Rv2906c	trmD	9	0.4	0.6	0.0	0.0	0.8	0.0	0.119	0.152	0.000	0.000	0.216	0.000	11.6	10.0	0.0	0.0	14.5	0.0	0.04	0.06	0.00	0.00	0.06	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2907c	rimM	6	5.0	13.6	2.1	15.8	3.2	15.3	0.497	1.393	0.000	1.547	0.202	1.515	22.6	20.5	12.6	23.6	12.7	20.4	0.22	0.67	0.17	0.67	0.25	0.75	0.009515	0.134111	-
Rv2908c	-	6	23.1	23.0	17.7	33.7	22.9	15.9	0.310	0.304	0.000	0.769	0.296	-0.122	52.0	39.4	42.4	55.1	39.2	38.0	0.44	0.58	0.42	0.61	0.58	0.42	0.944755	1.000000	-
Rv2909c	rpsP	7	4.8	6.5	6.7	10.9	15.2	12.2	-0.260	-0.023	0.000	0.436	0.787	0.549	50.3	45.7	47.0	76.0	106.6	85.1	0.10	0.14	0.14	0.14	0.14	0.14	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2910c	-	10	92.2	141.4	96.6	114.8	105.1	135.4	-0.063	0.528	0.000	0.239	0.116	0.467	98.8	141.4	120.7	127.6	116.7	142.5	0.93	1.00	0.80	0.90	0.90	0.95	0.344864	1.000000	-
Rv2911	dacB2	10	143.2	121.8	129.5	136.8	146.5	121.9	0.140	-0.085	0.000	0.077	0.172	-0.083	153.4	143.3	136.3	171.0	209.3	152.4	0.93	0.85	0.95	0.80	0.70	0.80	0.231977	1.000000	-
Rv2912c	-	8	108.7	145.8	125.6	121.3	109.6	147.8	-0.200	0.208	0.000	-0.048	-0.188	0.227	118.6	166.7	133.9	121.3	109.6	157.7	0.92	0.88	0.94	1.00	1.00	0.94	0.282809	1.000000	-
Rv2913c	-	25	71.8	76.0	79.4	74.3	82.5	80.5	-0.136	-0.059	0.000	-0.090	0.053	0.020	82.8	84.5	90.2	85.7	93.8	89.5	0.87	0.90	0.88	0.87	0.88	0.90	0.987804	1.000000	-
Rv2914c	pknI	23	106.9	101.9	114.4	118.7	115.9	117.3	-0.093	-0.159	0.000	0.051	0.019	0.035	131.8	130.3	142.2	141.2	130.1	128.5	0.81	0.78	0.80	0.84	0.89	0.91	0.948529	1.000000	-
Rv2915c	-	12	197.1	175.0	201.7	236.5	152.2	161.1	-0.032	-0.200	0.000	0.224	-0.395	-0.316	215.1	190.9	201.7	257.9	152.2	161.1	0.92	0.92	1.00	0.92	1.00	1.00	0.110108	0.784724	-
Rv2916c	ffh	9	5.0	4.5	1.7	4.2	8.5	3.9	0.576	0.503	0.000	0.451	1.008	0.404	33.9	27.2	31.0	22.6	38.3	17.5	0.15	0.17	0.06	0.19	0.22	0.22	0.700051	1.000000	-
Rv2917	-	23	192.2	203.5	198.2	180.9	176.2	188.3	-0.043	0.037	0.000	-0.128	-0.166	-0.072	221.0	217.7	212.0	189.1	192.9	206.3	0.87	0.93	0.93	0.96	0.91	0.91	0.933405	1.000000	-
Rv2918c	glnD	25	109.8	99.2	117.5	105.9	106.8	96.5	-0.094	-0.234	0.000	-0.144	-0.132	-0.272	137.3	120.9	143.3	128.1	130.3	117.7	0.80	0.82	0.82	0.83	0.82	0.82	0.999832	1.000000	-
Rv2919c	glnB	5	13.9	14.3	14.4	17.5	9.8	25.3	-0.040	-0.012	0.000	0.213	-0.398	0.638	23.2	20.4	24.1	26.3	16.3	50.5	0.60	0.70	0.60	0.67	0.60	0.50	0.138238	0.907189	-
Rv2920c	amt	17	61.6	70.9	59.2	64.8	56.7	69.5	0.054	0.242	0.000	0.120	-0.056	0.215	80.6	80.4	83.9	70.3	68.9	76.2	0.76	0.88	0.71	0.92	0.82	0.91	0.462740	1.000000	-
Rv2921c	ftsY	13	0.3	0.0	0.0	0.3	0.0	0.0	0.083	0.000	0.000	0.093	0.000	0.000	11.6	0.0	0.0	13.0	0.0	0.0	0.03	0.00	0.00	0.03	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2922c	smc	35	111.6	123.5	111.6	105.1	110.0	110.0	-0.000	0.141	0.000	-0.083	-0.020	-0.020	130.2	135.1	132.4	119.9	128.3	140.0	0.86	0.91	0.84	0.88	0.86	0.79	0.574446	1.000000	-
Rv2922A	acyP	1	50.9	0.0	37.8	56.4	0.0	71.7	0.383	-3.099	0.000	0.519	-3.099	0.839	50.9	0.0	75.7	56.4	0.0	71.7	1.00	0.00	0.50	1.00	0.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2923c	-	5	133.1	134.2	182.4	162.6	155.3	157.7	-0.440	-0.429	0.000	-0.160	-0.226	-0.204	153.6	134.2	182.4	162.6	155.3	157.7	0.87	1.00	1.00	1.00	1.00	1.00	0.722786	1.000000	-
Rv2924c	fpg	13	334.8	309.0	268.7	300.7	307.4	314.7	0.312	0.198	0.000	0.160	0.191	0.224	343.7	309.0	268.7	300.7	307.4	314.7	0.97	1.00	1.00	1.00	1.00	1.00	0.903855	1.000000	-
Rv2925c	rnc	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2926c	-	4	53.7	57.6	68.8	60.1	54.8	63.3	-0.331	-0.239	0.000	-0.182	-0.303	-0.112	214.7	115.1	137.6	180.2	109.7	168.9	0.25	0.50	0.50	0.33	0.50	0.38	0.969478	1.000000	-
Rv2927c	-	10	0.0	0.0	0.0	0.0	0.7	0.0	0.000	0.000	0.000	0.000	0.195	0.000	0.0	0.0	0.0	0.0	14.5	0.0	0.00	0.00	0.00	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2928	tesA	24	15.0	8.1	9.5	5.7	7.1	19.1	0.463	-0.150	0.000	-0.444	-0.261	0.730	40.0	17.6	35.1	18.5	18.0	33.9	0.38	0.46	0.27	0.31	0.40	0.56	0.000004	0.000129	-
Rv2929	-	4	8.0	9.0	0.0	2.4	7.4	2.5	1.376	1.488	0.000	0.572	1.315	0.590	16.0	18.0	0.0	14.6	19.8	10.1	0.50	0.50	0.00	0.17	0.38	0.25	0.177501	1.000000	-
Rv2930	fadD26	33	321.0	173.8	258.3	127.5	105.8	216.9	0.308	-0.558	0.000	-0.991	-1.249	-0.247	429.4	244.1	378.9	200.4	136.9	275.2	0.75	0.71	0.68	0.64	0.77	0.79	0.006189	0.094254	-
Rv2931	ppsA	69	222.4	114.4	208.2	84.6	69.0	157.6	0.093	-0.837	0.000	-1.251	-1.526	-0.391	277.3	153.2	249.9	108.8	89.0	190.8	0.80	0.75	0.83	0.78	0.78	0.83	0.000000	0.000000	-
Rv2932	ppsB	64	205.4	113.3	193.5	65.8	58.1	138.5	0.084	-0.747	0.000	-1.487	-1.653	-0.468	245.0	139.5	238.2	86.6	78.3	167.2	0.84	0.81	0.81	0.76	0.74	0.83	0.000000	0.000000	-
Rv2933	ppsC	79	217.3	118.7	216.9	83.8	72.2	155.2	0.003	-0.844	0.000	-1.321	-1.523	-0.470	248.8	138.9	248.3	103.4	89.1	176.4	0.87	0.85	0.87	0.81	0.81	0.88	0.000000	0.000000	-
Rv2934	ppsD	56	273.0	145.0	239.5	105.0	86.3	186.3	0.186	-0.705	0.000	-1.152	-1.422	-0.354	334.8	180.4	291.5	135.7	102.8	226.8	0.82	0.80	0.82	0.77	0.84	0.82	0.000000	0.000000	-
Rv2935	ppsE	63	415.5	223.0	364.2	151.9	124.7	249.6	0.188	-0.695	0.000	-1.235	-1.510	-0.536	438.7	246.5	395.6	159.5	139.0	271.2	0.95	0.90	0.92	0.95	0.90	0.92	0.000000	0.000000	-
Rv2936	drrA	17	304.3	302.1	252.8	263.0	284.5	339.7	0.263	0.253	0.000	0.056	0.167	0.419	304.3	302.1	260.4	263.0	284.5	339.7	1.00	1.00	0.97	1.00	1.00	1.00	0.703110	1.000000	-
Rv2937	drrB	21	113.2	110.4	113.1	94.7	98.4	122.5	0.001	-0.034	0.000	-0.245	-0.193	0.110	173.9	159.9	176.0	142.0	133.3	151.3	0.65	0.69	0.64	0.67	0.74	0.81	0.964560	1.000000	-
Rv2938	drrC	24	127.7	142.1	123.2	116.0	123.5	161.3	0.050	0.199	0.000	-0.083	0.004	0.376	139.3	148.2	134.3	124.6	134.7	168.4	0.92	0.96	0.92	0.93	0.92	0.96	0.673755	1.000000	-
Rv2939	papA5	26	141.2	93.9	122.3	60.3	57.9	113.2	0.200	-0.363	0.000	-0.962	-1.017	-0.107	157.3	106.2	155.1	85.5	70.0	125.2	0.90	0.88	0.79	0.71	0.83	0.90	0.000378	0.008425	-
Rv2940c	mas	72	401.1	215.8	388.8	169.4	138.9	276.4	0.044	-0.835	0.000	-1.175	-1.453	-0.485	426.8	237.2	411.7	187.7	150.3	288.4	0.94	0.91	0.94	0.90	0.92	0.96	0.000000	0.000000	-
Rv2941	fadD28	42	152.0	102.9	139.1	57.9	60.2	134.1	0.123	-0.417	0.000	-1.196	-1.144	-0.051	172.5	115.3	160.1	73.0	73.3	148.2	0.88	0.89	0.87	0.79	0.82	0.90	0.000000	0.000000	-
Rv2942	mmpL7	38	247.8	268.3	216.1	208.4	205.7	253.8	0.193	0.306	0.000	-0.051	-0.070	0.227	266.5	291.3	238.0	228.4	223.3	260.7	0.93	0.92	0.91	0.91	0.92	0.97	0.577147	1.000000	-
Rv2943	-	10	222.4	197.6	211.0	249.0	245.6	197.3	0.074	-0.092	0.000	0.233	0.214	-0.095	247.1	197.6	263.8	249.0	258.5	197.3	0.90	1.00	0.80	1.00	0.95	1.00	0.196445	1.000000	-
Rv2943A	-	6	100.1	91.6	77.6	110.4	75.8	76.1	0.347	0.226	0.000	0.483	-0.032	-0.027	163.8	109.9	93.1	124.2	91.0	91.3	0.61	0.83	0.83	0.89	0.83	0.83	0.796972	1.000000	-
Rv2944	-	10	62.8	58.5	49.7	69.6	47.9	51.5	0.310	0.215	0.000	0.447	-0.048	0.047	117.8	73.1	76.5	87.0	68.4	68.7	0.53	0.80	0.65	0.80	0.70	0.75	0.699065	1.000000	-
Rv2945c	lppX	10	93.8	95.0	99.3	87.2	86.5	132.7	-0.079	-0.061	0.000	-0.179	-0.190	0.400	97.0	95.0	104.6	87.2	86.5	132.7	0.97	1.00	0.95	1.00	1.00	1.00	0.718143	1.000000	-
Rv2946c	pks1	44	186.1	165.6	173.1	175.5	166.7	179.0	0.101	-0.062	0.000	0.019	-0.053	0.047	215.4	177.7	195.3	198.0	193.0	199.4	0.86	0.93	0.89	0.89	0.86	0.90	0.929743	1.000000	-
Rv2947c	pks15	18	90.6	97.7	91.0	101.6	98.8	107.5	-0.006	0.097	0.000	0.151	0.113	0.228	116.5	106.6	131.1	127.6	111.2	113.8	0.78	0.92	0.69	0.80	0.89	0.94	0.358760	1.000000	-
Rv2948c	fadD22	44	119.3	113.9	119.3	110.6	115.2	121.4	0.000	-0.064	0.000	-0.104	-0.048	0.025	135.8	125.3	138.1	119.7	128.3	130.3	0.88	0.91	0.86	0.92	0.90	0.93	0.965094	1.000000	-
Rv2949c	-	20	4.7	8.6	7.1	7.6	6.0	6.6	-0.309	0.175	0.000	0.062	-0.131	-0.059	18.9	28.7	21.7	23.9	21.8	15.5	0.25	0.30	0.33	0.32	0.28	0.42	0.304749	1.000000	-
Rv2950c	fadD29	36	133.8	141.7	123.3	134.1	140.3	144.3	0.113	0.193	0.000	0.116	0.179	0.219	182.9	167.2	167.5	174.4	165.6	185.6	0.73	0.85	0.74	0.77	0.85	0.78	0.913140	1.000000	-
Rv2951c	-	23	179.9	193.4	186.8	180.5	183.9	188.4	-0.053	0.048	0.000	-0.048	-0.022	0.012	182.5	193.4	204.6	185.9	183.9	188.4	0.99	1.00	0.91	0.97	1.00	1.00	0.332561	1.000000	-
Rv2952	-	14	55.2	68.0	59.8	53.5	60.9	81.9	-0.105	0.173	0.000	-0.146	0.024	0.423	68.2	76.2	76.1	59.2	63.1	88.2	0.81	0.89	0.79	0.90	0.96	0.93	0.287970	1.000000	-
Rv2953	-	23	126.1	128.7	143.3	125.2	115.7	150.5	-0.177	-0.149	0.000	-0.187	-0.297	0.069	145.0	155.8	160.7	141.7	129.8	157.4	0.87	0.83	0.89	0.88	0.89	0.96	0.840174	1.000000	-
Rv2954c	-	13	336.5	279.2	346.3	331.3	313.0	303.5	-0.041	-0.306	0.000	-0.063	-0.144	-0.187	354.7	302.4	346.3	331.3	325.5	328.8	0.95	0.92	1.00	1.00	0.96	0.92	0.656470	1.000000	-
Rv2955c	-	16	169.2	167.9	160.4	157.5	151.0	177.9	0.075	0.064	0.000	-0.025	-0.084	0.145	169.2	167.9	160.4	157.5	151.0	177.9	1.00	1.00	1.00	1.00	1.00	1.00	0.972823	1.000000	-
Rv2956	-	17	21.2	22.8	18.8	22.3	19.5	24.8	0.140	0.222	0.000	0.200	0.042	0.324	51.5	70.3	42.6	43.8	41.4	40.1	0.41	0.32	0.44	0.51	0.47	0.62	0.515949	1.000000	-
Rv2957	-	15	224.7	216.5	218.9	213.9	227.2	247.3	0.037	-0.016	0.000	-0.033	0.053	0.172	273.3	231.9	252.6	234.8	243.4	247.3	0.82	0.93	0.87	0.91	0.93	1.00	0.577752	1.000000	-
Rv2958c	-	24	108.7	120.4	112.4	131.5	125.2	114.8	-0.047	0.095	0.000	0.217	0.149	0.029	134.9	141.0	158.7	163.2	139.7	122.5	0.81	0.85	0.71	0.81	0.90	0.94	0.378665	1.000000	-
Rv2959c	-	28	20.7	19.4	11.2	14.0	20.5	21.3	0.668	0.595	0.000	0.230	0.655	0.700	44.6	32.0	31.3	28.0	28.7	33.1	0.46	0.61	0.36	0.50	0.71	0.64	0.032881	0.348925	-
Rv2960c	-	7	187.9	167.9	171.1	170.6	212.6	179.2	0.132	-0.026	0.000	-0.004	0.306	0.065	187.9	167.9	184.2	170.6	212.6	179.2	1.00	1.00	0.93	1.00	1.00	1.00	0.909817	1.000000	-
Rv2961	-	7	281.3	241.1	239.3	281.0	232.6	245.0	0.229	0.011	0.000	0.227	-0.040	0.033	311.0	281.3	239.3	327.8	271.4	245.0	0.90	0.86	1.00	0.86	0.86	1.00	0.544816	1.000000	-
Rv2962c	-	18	130.3	131.8	108.8	135.6	113.1	128.1	0.250	0.266	0.000	0.305	0.054	0.226	153.0	153.1	139.8	174.3	127.2	148.8	0.85	0.86	0.78	0.78	0.89	0.86	0.920680	1.000000	-
Rv2963	-	24	79.5	81.3	84.9	82.0	94.0	94.3	-0.089	-0.059	0.000	-0.047	0.139	0.143	93.8	97.5	94.7	89.5	102.5	102.8	0.85	0.83	0.90	0.92	0.92	0.92	0.817097	1.000000	-
Rv2964	purU	17	119.4	117.4	130.9	103.3	106.0	119.4	-0.127	-0.151	0.000	-0.327	-0.292	-0.128	141.6	117.4	134.8	122.5	116.2	150.3	0.84	1.00	0.97	0.84	0.91	0.79	0.053317	0.494731	-
Rv2965c	coaD	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2966c	-	7	170.4	190.1	173.4	190.4	182.2	144.5	-0.025	0.129	0.000	0.131	0.069	-0.255	178.9	190.1	186.8	190.4	182.2	144.5	0.95	1.00	0.93	1.00	1.00	1.00	0.916621	1.000000	-
Rv2967c	pca	59	104.3	107.6	105.7	106.1	84.6	108.5	-0.019	0.025	0.000	0.006	-0.305	0.037	117.5	127.0	127.3	122.0	104.0	123.1	0.89	0.85	0.83	0.87	0.81	0.88	0.399950	1.000000	-
Rv2968c	-	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2969c	-	10	0.0	0.0	0.0	0.5	0.0	0.0	0.000	0.000	0.000	0.136	0.000	0.000	0.0	0.0	0.0	14.8	0.0	0.0	0.00	0.00	0.00	0.03	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2970c	lipN	16	186.6	210.6	206.3	187.6	197.4	180.9	-0.142	0.029	0.000	-0.134	-0.062	-0.185	203.5	210.6	206.3	191.6	210.6	180.9	0.92	1.00	1.00	0.98	0.94	1.00	0.392679	1.000000	-
Rv2970A	-	3	14.6	25.6	20.8	20.5	18.1	39.8	-0.399	0.244	0.000	-0.022	-0.165	0.793	21.9	25.6	31.3	23.0	18.1	47.7	0.67	1.00	0.67	0.89	1.00	0.83	0.010565	0.143877	-
Rv2971	-	13	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2972c	-	10	247.9	217.0	223.4	206.4	218.6	232.9	0.147	-0.041	0.000	-0.112	-0.031	0.059	247.9	217.0	223.4	206.4	218.6	232.9	1.00	1.00	1.00	1.00	1.00	1.00	0.979542	1.000000	-
Rv2973c	recG	24	87.8	103.3	93.5	98.5	84.6	110.6	-0.085	0.138	0.000	0.073	-0.136	0.231	119.3	121.0	121.2	118.3	123.0	136.1	0.74	0.85	0.77	0.83	0.69	0.81	0.660330	1.000000	-
Rv2974c	-	19	227.8	209.7	202.3	200.7	213.0	218.1	0.168	0.051	0.000	-0.011	0.073	0.106	265.0	227.7	219.6	211.8	213.0	230.2	0.86	0.92	0.92	0.95	1.00	0.95	0.518489	1.000000	-
Rv2975c	-	2	84.5	162.7	81.4	73.6	97.5	127.2	0.051	0.957	0.000	-0.136	0.246	0.614	169.0	325.4	162.8	147.3	195.0	254.5	0.50	0.50	0.50	0.50	0.50	0.50	0.272020	1.000000	-
Rv2976c	ung	8	116.1	134.7	129.5	113.4	99.8	80.4	-0.152	0.054	0.000	-0.185	-0.361	-0.655	139.4	153.9	148.1	151.2	114.1	107.2	0.83	0.88	0.88	0.75	0.88	0.75	0.891787	1.000000	-
Rv2977c	thiL	6	0.0	1.7	0.0	0.0	0.0	0.9	0.000	0.422	0.000	0.000	0.000	0.239	0.0	10.2	0.0	0.0	0.0	10.8	0.00	0.17	0.00	0.00	0.00	0.08	0.287024	1.000000	-
Rv2978c	-	12	123.7	112.0	127.5	116.1	114.9	121.8	-0.042	-0.180	0.000	-0.131	-0.145	-0.064	171.3	141.5	180.1	154.7	162.2	162.4	0.72	0.79	0.71	0.75	0.71	0.75	0.999652	1.000000	-
Rv2979c	-	7	151.7	142.7	197.3	139.7	129.4	157.4	-0.368	-0.453	0.000	-0.483	-0.589	-0.316	151.7	142.7	197.3	139.7	129.4	157.4	1.00	1.00	1.00	1.00	1.00	1.00	0.641479	1.000000	-
Rv2980	-	5	130.7	113.4	87.4	91.3	77.6	119.6	0.555	0.358	0.000	0.060	-0.162	0.431	150.9	141.8	145.7	91.3	77.6	149.5	0.87	0.80	0.60	1.00	1.00	0.80	0.050217	0.472558	-
Rv2981c	ddl	13	0.0	0.0	0.0	0.0	0.6	0.0	0.000	0.000	0.000	0.000	0.153	0.000	0.0	0.0	0.0	0.0	14.5	0.0	0.00	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2982c	gpsA	11	323.8	333.9	316.6	298.1	265.3	236.4	0.032	0.076	0.000	-0.086	-0.251	-0.414	323.8	333.9	348.3	298.1	291.8	273.7	1.00	1.00	0.91	1.00	0.91	0.86	0.165579	0.994969	-
Rv2983	-	5	90.2	90.8	66.3	70.3	92.0	67.2	0.417	0.425	0.000	0.078	0.444	0.018	96.7	100.9	66.3	87.8	115.0	67.2	0.93	0.90	1.00	0.80	0.80	1.00	0.178831	1.000000	-
Rv2984	ppk	30	0.5	0.3	0.4	0.6	0.6	0.7	0.025	-0.021	0.000	0.049	0.055	0.066	11.6	10.2	12.6	27.4	19.0	20.3	0.04	0.03	0.03	0.02	0.03	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv2985	mutT1	15	47.0	54.3	68.4	57.0	55.9	45.0	-0.497	-0.308	0.000	-0.243	-0.269	-0.553	57.1	62.6	78.9	67.5	67.0	61.4	0.82	0.87	0.87	0.84	0.83	0.73	0.666332	1.000000	-
Rv2986c	hupB	8	7.1	10.7	4.7	6.1	7.9	7.7	0.318	0.694	0.000	0.192	0.406	0.381	28.5	28.6	18.9	24.5	15.8	13.6	0.25	0.38	0.25	0.25	0.50	0.56	0.103479	0.750690	-
Rv2987c	leuD	7	6.6	7.2	0.9	5.4	1.0	3.7	0.980	1.050	0.000	0.814	0.033	0.554	23.2	16.8	12.6	22.6	14.5	17.1	0.29	0.43	0.07	0.24	0.07	0.21	0.448062	1.000000	-
Rv2988c	leuC	12	48.4	36.5	31.1	14.0	6.2	33.8	0.565	0.204	0.000	-0.923	-1.693	0.106	69.7	48.7	57.4	29.7	16.4	47.7	0.69	0.75	0.54	0.47	0.38	0.71	0.000024	0.000695	-
Rv2989	-	6	111.7	128.4	126.4	120.5	89.3	149.8	-0.171	0.021	0.000	-0.067	-0.479	0.236	143.7	154.1	168.6	135.5	119.1	199.7	0.78	0.83	0.75	0.89	0.75	0.75	0.973262	1.000000	-
Rv2990c	-	17	122.4	125.8	126.5	106.6	136.7	164.2	-0.046	-0.008	0.000	-0.237	0.107	0.364	135.7	142.6	148.3	115.7	149.9	169.2	0.90	0.88	0.85	0.92	0.91	0.97	0.380188	1.000000	-
Rv2991	-	5	236.7	200.9	249.4	176.6	179.9	251.8	-0.074	-0.305	0.000	-0.486	-0.460	0.014	236.7	251.1	249.4	189.2	179.9	314.8	1.00	0.80	1.00	0.93	1.00	0.80	0.183583	1.000000	-
Rv2992c	gltX	19	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv2993c	-	8	7.1	15.8	7.5	3.5	5.3	5.0	-0.041	0.742	0.000	-0.548	-0.273	-0.322	28.4	42.2	19.9	14.1	14.2	13.2	0.25	0.38	0.38	0.25	0.38	0.38	0.028717	0.313062	-
Rv2994	-	19	64.6	73.0	75.5	85.4	79.4	79.9	-0.210	-0.046	0.000	0.168	0.068	0.077	89.8	89.5	89.6	97.4	86.2	92.0	0.72	0.82	0.84	0.88	0.92	0.87	0.715115	1.000000	-
Rv2995c	leuB	9	40.3	41.2	29.5	13.4	3.6	26.2	0.393	0.421	0.000	-0.911	-2.003	-0.147	51.8	49.4	48.3	27.7	16.3	36.2	0.78	0.83	0.61	0.48	0.22	0.72	0.000156	0.003823	-
Rv2996c	serA1	10	16.5	16.8	14.3	29.8	41.2	13.4	0.156	0.174	0.000	0.848	1.257	-0.075	38.2	24.0	31.8	40.6	51.5	24.3	0.43	0.70	0.45	0.73	0.80	0.55	0.004689	0.074249	-
Rv2997	-	16	125.6	135.0	145.0	124.2	141.1	96.7	-0.200	-0.100	0.000	-0.216	-0.038	-0.561	158.6	166.1	193.4	170.3	196.3	128.9	0.79	0.81	0.75	0.73	0.72	0.75	0.865357	1.000000	-
Rv2998	-	5	86.5	110.0	141.3	100.3	93.7	131.7	-0.677	-0.347	0.000	-0.474	-0.568	-0.098	108.1	122.2	157.0	100.3	93.7	131.7	0.80	0.90	0.90	1.00	1.00	1.00	0.367783	1.000000	-
Rv2998A	-	1	0.0	26.0	0.0	0.0	0.0	0.0	0.000	2.635	0.000	0.000	0.000	0.000	0.0	52.1	0.0	0.0	0.0	0.0	0.00	0.50	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv2999	lppY	11	108.4	72.4	115.5	98.1	74.8	80.9	-0.087	-0.639	0.000	-0.225	-0.595	-0.488	149.1	93.6	181.5	161.9	137.1	118.6	0.73	0.77	0.64	0.61	0.55	0.68	0.617919	1.000000	-
Rv3000	-	8	79.4	96.6	118.8	104.0	75.8	85.9	-0.553	-0.284	0.000	-0.183	-0.616	-0.446	119.1	154.6	172.8	124.8	101.0	124.9	0.67	0.62	0.69	0.83	0.75	0.69	0.782742	1.000000	-
Rv3001c	ilvC	12	2.9	0.4	2.6	2.3	0.0	2.4	0.067	-0.481	0.000	-0.051	-0.601	-0.034	17.7	10.4	31.0	27.8	0.0	11.6	0.17	0.04	0.08	0.08	0.00	0.21	0.103163	0.749765	-
Rv3002c	ilvH	4	16.9	15.3	16.5	11.7	12.9	27.9	0.030	-0.082	0.000	-0.361	-0.267	0.613	50.8	24.5	33.0	23.5	34.3	37.2	0.33	0.62	0.50	0.50	0.38	0.75	0.529765	1.000000	-
Rv3003c	ilvB1	15	8.7	9.9	8.3	23.6	10.6	11.2	0.046	0.169	0.000	1.104	0.234	0.283	26.2	24.9	27.6	36.6	26.6	27.9	0.33	0.40	0.30	0.64	0.40	0.40	0.048857	0.463773	-
Rv3004	cfp6	3	105.7	56.1	94.6	95.4	55.6	56.9	0.153	-0.705	0.000	0.011	-0.716	-0.685	105.7	84.2	113.5	95.4	66.7	85.4	1.00	0.67	0.83	1.00	0.83	0.67	0.473013	1.000000	-
Rv3005c	-	19	110.1	109.6	129.4	125.6	126.0	103.7	-0.223	-0.230	0.000	-0.041	-0.037	-0.306	123.1	112.5	144.6	132.6	140.8	103.7	0.89	0.97	0.89	0.95	0.89	1.00	0.342813	1.000000	-
Rv3006	lppZ	16	1.0	1.9	1.2	0.0	2.5	1.6	-0.053	0.152	0.000	-0.306	0.288	0.095	23.0	15.0	12.6	0.0	13.6	17.1	0.04	0.12	0.09	0.00	0.19	0.09	0.107350	0.773151	-
Rv3007c	-	8	93.2	111.4	109.6	117.3	128.5	141.3	-0.223	0.023	0.000	0.094	0.220	0.352	111.8	127.3	125.3	140.8	146.9	141.3	0.83	0.88	0.88	0.83	0.88	1.00	0.658786	1.000000	-
Rv3008	-	15	157.4	187.8	172.9	166.0	169.6	184.6	-0.132	0.116	0.000	-0.056	-0.026	0.093	177.0	201.2	199.4	169.8	169.6	191.0	0.89	0.93	0.87	0.98	1.00	0.97	0.502920	1.000000	-
Rv3009c	gatB	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3010c	pfkA	8	78.0	128.7	136.1	114.6	105.7	145.8	-0.764	-0.077	0.000	-0.238	-0.349	0.097	98.6	128.7	181.4	125.1	105.7	145.8	0.79	1.00	0.75	0.92	1.00	1.00	0.099780	0.742766	-
Rv3011c	gatA	20	0.0	0.0	0.0	0.2	0.0	0.2	0.000	0.000	0.000	0.068	0.000	0.066	0.0	0.0	0.0	14.4	0.0	9.4	0.00	0.00	0.00	0.02	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3012c	gatC	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3013	-	3	149.8	142.8	178.9	131.4	168.4	110.8	-0.249	-0.315	0.000	-0.431	-0.085	-0.668	168.5	142.8	214.7	131.4	168.4	110.8	0.89	1.00	0.83	1.00	1.00	1.00	0.564562	1.000000	-
Rv3014c	ligA	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3015c	-	9	204.6	200.3	164.4	187.9	197.6	194.8	0.307	0.277	0.000	0.187	0.258	0.238	240.2	257.5	185.0	187.9	222.3	206.3	0.85	0.78	0.89	1.00	0.89	0.94	0.403737	1.000000	-
Rv3016	lpqA	10	69.8	64.5	66.6	69.4	75.1	89.0	0.062	-0.044	0.000	0.054	0.160	0.391	80.5	64.5	70.2	74.4	83.4	93.6	0.87	1.00	0.95	0.93	0.90	0.95	0.815214	1.000000	-
Rv3017c	esxQ	8	186.7	184.2	205.8	145.9	169.6	206.5	-0.137	-0.156	0.000	-0.483	-0.272	0.005	213.3	210.5	235.2	194.5	193.8	236.0	0.88	0.88	0.88	0.75	0.88	0.88	0.977540	1.000000	-
Rv3018c	PPE46	27	134.2	110.0	123.2	133.3	131.7	121.2	0.118	-0.157	0.000	0.109	0.093	-0.023	301.9	228.5	277.3	263.3	296.4	233.8	0.44	0.48	0.44	0.51	0.44	0.52	0.996448	1.000000	-
Rv3018A	PE27A	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3019c	esxR	8	19.8	30.6	28.5	32.1	31.9	46.1	-0.436	0.087	0.000	0.145	0.138	0.608	29.7	40.8	38.0	45.3	39.3	49.2	0.67	0.75	0.75	0.71	0.81	0.94	0.382590	1.000000	-
Rv3020c	esxS	7	72.5	71.4	79.2	54.2	59.7	90.4	-0.120	-0.142	0.000	-0.509	-0.381	0.179	108.7	124.9	100.8	71.1	83.6	90.4	0.67	0.57	0.79	0.76	0.71	1.00	0.249335	1.000000	-
Rv3021c	PPE47	21	87.7	65.8	82.5	72.1	88.4	68.5	0.083	-0.305	0.000	-0.184	0.093	-0.252	276.3	172.8	216.6	174.6	185.6	191.8	0.32	0.38	0.38	0.41	0.48	0.36	0.952715	1.000000	-
Rv3022c	PPE48	5	196.3	159.2	174.3	179.7	205.7	208.4	0.167	-0.127	0.000	0.042	0.233	0.251	210.3	159.2	174.3	179.7	205.7	208.4	0.93	1.00	1.00	1.00	1.00	1.00	0.955352	1.000000	-
Rv3022A	PE29	6	200.2	217.3	219.6	183.6	200.9	185.9	-0.130	-0.015	0.000	-0.252	-0.126	-0.235	200.2	217.3	219.6	183.6	200.9	185.9	1.00	1.00	1.00	1.00	1.00	1.00	0.994250	1.000000	-
Rv3023c	-	15	259.9	256.4	278.0	258.5	251.2	245.4	-0.095	-0.114	0.000	-0.103	-0.144	-0.176	278.5	284.9	278.0	258.5	251.2	253.9	0.93	0.90	1.00	1.00	1.00	0.97	0.345828	1.000000	-
Rv3024c	trmU	13	61.6	36.3	67.0	48.9	73.1	25.7	-0.112	-0.800	0.000	-0.416	0.117	-1.228	85.8	52.5	102.4	70.7	95.0	37.1	0.72	0.69	0.65	0.69	0.77	0.69	0.014577	0.185647	-
Rv3025c	iscS	15	17.3	14.6	26.7	10.1	13.3	10.3	-0.509	-0.696	0.000	-1.068	-0.792	-1.049	35.3	31.2	61.6	21.7	24.9	20.6	0.49	0.47	0.43	0.47	0.53	0.50	0.000454	0.009897	-
Rv3026c	-	10	209.3	184.1	200.8	200.8	192.8	190.7	0.058	-0.123	0.000	0.000	-0.057	-0.073	216.5	204.5	236.3	223.1	214.2	211.9	0.97	0.90	0.85	0.90	0.90	0.90	0.984360	1.000000	-
Rv3027c	-	17	205.2	203.4	213.4	222.9	207.2	222.7	-0.055	-0.068	0.000	0.061	-0.042	0.060	209.3	223.1	219.9	222.9	213.5	236.6	0.98	0.91	0.97	1.00	0.97	0.94	0.540523	1.000000	-
Rv3028c	fixB	9	10.1	1.7	9.1	0.0	0.5	0.6	0.097	-1.072	0.000	-1.496	-1.359	-1.333	22.7	10.3	27.3	0.0	9.0	10.8	0.44	0.17	0.33	0.00	0.06	0.06	0.000011	0.000340	-
Rv3029c	fixA	6	11.0	0.0	11.0	0.0	0.0	0.0	0.003	-1.677	0.000	-1.677	-1.677	-1.677	33.1	0.0	26.4	0.0	0.0	0.0	0.33	0.00	0.42	0.00	0.00	0.00	0.000038	0.001076	-
Rv3030	-	10	12.4	10.7	1.9	3.3	8.7	5.5	1.336	1.186	0.000	0.266	0.996	0.602	53.1	35.6	12.6	32.9	35.0	27.3	0.23	0.30	0.15	0.10	0.25	0.20	0.304215	1.000000	-
Rv3031	-	20	3.6	0.8	3.5	0.2	0.4	0.8	0.021	-0.553	0.000	-0.699	-0.659	-0.551	18.0	15.4	17.3	13.0	14.5	15.6	0.20	0.05	0.20	0.02	0.03	0.05	0.003693	0.061393	-
Rv3032	-	9	16.6	5.6	20.9	9.8	17.3	2.2	-0.260	-1.283	0.000	-0.812	-0.213	-1.854	37.4	16.9	53.7	37.6	28.4	13.0	0.44	0.33	0.39	0.26	0.61	0.17	0.009210	0.130939	-
Rv3033	-	3	86.5	84.9	66.9	88.2	72.2	92.8	0.348	0.322	0.000	0.374	0.102	0.443	129.8	84.9	80.3	99.3	108.3	92.8	0.67	1.00	0.83	0.89	0.67	1.00	0.733440	1.000000	-
Rv3034c	-	12	119.4	115.2	106.1	115.3	119.7	101.9	0.164	0.113	0.000	0.115	0.166	-0.056	477.7	460.7	424.4	461.4	478.6	407.5	0.25	0.25	0.25	0.25	0.25	0.25	0.999987	1.000000	-
Rv3035	-	15	1.4	0.3	1.3	0.0	5.8	0.4	0.031	-0.231	0.000	-0.324	0.784	-0.224	15.7	10.0	18.9	0.0	15.8	10.8	0.09	0.03	0.07	0.00	0.37	0.03	0.000599	0.012791	-
Rv3036c	TB22.2	14	278.4	230.6	230.9	250.9	219.5	253.4	0.265	-0.002	0.000	0.118	-0.071	0.132	285.2	230.6	230.9	257.0	219.5	253.4	0.98	1.00	1.00	0.98	1.00	1.00	0.920611	1.000000	-
Rv3037c	-	14	262.6	203.7	270.5	231.9	236.3	207.2	-0.042	-0.401	0.000	-0.218	-0.191	-0.377	306.4	228.1	291.3	263.3	264.6	241.7	0.86	0.89	0.93	0.88	0.89	0.86	0.988934	1.000000	-
Rv3038c	-	10	5.5	0.5	3.1	11.2	29.8	0.0	0.362	-0.562	0.000	0.991	2.096	-0.705	20.5	10.4	15.7	21.0	39.8	0.0	0.27	0.05	0.20	0.53	0.75	0.00	0.000000	0.000000	-
Rv3039c	echA17	10	61.2	73.8	90.4	85.6	80.9	73.9	-0.526	-0.276	0.000	-0.074	-0.152	-0.273	108.1	122.9	139.0	107.0	89.9	113.7	0.57	0.60	0.65	0.80	0.90	0.65	0.458986	1.000000	-
Rv3040c	-	9	118.2	152.4	158.4	139.7	163.8	152.3	-0.406	-0.053	0.000	-0.175	0.047	-0.055	118.2	152.4	158.4	139.7	163.8	152.3	1.00	1.00	1.00	1.00	1.00	1.00	0.848330	1.000000	-
Rv3041c	-	8	225.8	244.8	217.0	225.8	261.4	243.4	0.056	0.170	0.000	0.056	0.263	0.162	258.1	244.8	217.0	225.8	261.4	243.4	0.88	1.00	1.00	1.00	1.00	1.00	0.563076	1.000000	-
Rv3042c	serB2	11	28.2	33.1	24.4	46.9	46.2	28.1	0.175	0.375	0.000	0.821	0.801	0.172	51.7	42.9	38.3	53.4	53.5	32.6	0.55	0.77	0.64	0.88	0.86	0.86	0.082043	0.666702	-
Rv3043c	ctaD	22	0.7	0.5	1.6	0.2	0.0	0.2	-0.210	-0.262	0.000	-0.337	-0.393	-0.323	14.8	10.4	17.2	13.0	0.0	10.8	0.05	0.05	0.09	0.02	0.00	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3044	fecB	15	8.2	11.8	2.1	5.2	19.4	2.0	0.892	1.245	0.000	0.517	1.783	-0.016	24.5	27.3	15.7	23.2	38.9	15.2	0.33	0.43	0.13	0.22	0.50	0.13	0.000216	0.005097	-
Rv3045	adhC	18	149.6	180.6	162.4	143.0	156.5	145.1	-0.115	0.150	0.000	-0.177	-0.051	-0.157	158.4	185.8	182.6	151.4	156.5	153.7	0.94	0.97	0.89	0.94	1.00	0.94	0.614156	1.000000	-
Rv3046c	-	2	68.9	38.2	57.9	48.5	73.1	57.7	0.232	-0.544	0.000	-0.236	0.311	-0.005	68.9	50.9	57.9	58.1	73.1	57.7	1.00	0.75	1.00	0.83	1.00	1.00	0.803102	1.000000	-
Rv3047c	-	5	135.0	169.8	108.9	165.0	144.2	130.0	0.299	0.619	0.000	0.579	0.390	0.246	135.0	169.8	108.9	165.0	144.2	130.0	1.00	1.00	1.00	1.00	1.00	1.00	0.530334	1.000000	-
Rv3048c	nrdF	21	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3049c	-	29	179.1	158.2	182.3	128.4	127.7	151.8	-0.025	-0.199	0.000	-0.490	-0.497	-0.256	187.7	163.8	199.5	137.9	132.3	154.5	0.95	0.97	0.91	0.93	0.97	0.98	0.337192	1.000000	-
Rv3050c	-	7	61.8	76.3	54.4	74.8	74.5	63.4	0.170	0.453	0.000	0.426	0.421	0.203	76.4	97.1	76.1	82.7	86.9	73.9	0.81	0.79	0.71	0.90	0.86	0.86	0.959368	1.000000	-
Rv3051c	nrdE	50	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3052c	nrdI	13	18.7	24.6	32.3	0.0	0.0	32.0	-0.653	-0.333	0.000	-2.899	-2.899	-0.012	38.4	33.7	52.5	0.0	0.0	41.6	0.49	0.73	0.62	0.00	0.00	0.77	0.000000	0.000000	-
Rv3053c	nrdH	8	0.0	1.3	0.0	0.0	0.0	0.0	0.000	0.335	0.000	0.000	0.000	0.000	0.0	20.9	0.0	0.0	0.0	0.0	0.00	0.06	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3054c	-	5	226.8	242.2	282.4	241.5	238.0	282.7	-0.310	-0.217	0.000	-0.221	-0.242	0.002	243.0	242.2	313.7	258.7	264.5	282.7	0.93	1.00	0.90	0.93	0.90	1.00	0.978547	1.000000	-
Rv3055	-	7	125.3	168.6	156.9	177.7	171.9	121.2	-0.313	0.101	0.000	0.174	0.128	-0.360	125.3	168.6	156.9	177.7	171.9	141.3	1.00	1.00	1.00	1.00	1.00	0.86	0.243763	1.000000	-
Rv3056	dinP	18	194.8	216.3	215.3	215.8	206.3	193.7	-0.141	0.007	0.000	0.004	-0.060	-0.149	223.8	243.4	234.9	248.0	239.6	232.4	0.87	0.89	0.92	0.87	0.86	0.83	0.966738	1.000000	-
Rv3057c	-	16	110.1	169.8	147.8	231.7	251.9	140.6	-0.409	0.194	0.000	0.631	0.750	-0.070	117.4	175.3	152.6	236.6	251.9	140.6	0.94	0.97	0.97	0.98	1.00	1.00	0.000054	0.001450	-
Rv3058c	-	9	143.0	163.2	138.6	135.8	119.2	150.8	0.043	0.228	0.000	-0.029	-0.209	0.117	160.8	163.2	155.9	141.0	119.2	159.6	0.89	1.00	0.89	0.96	1.00	0.94	0.811239	1.000000	-
Rv3059	cyp136	21	201.7	176.5	179.0	172.9	173.6	199.8	0.168	-0.019	0.000	-0.049	-0.043	0.155	244.3	200.4	208.8	201.7	197.1	215.2	0.83	0.88	0.86	0.86	0.88	0.93	0.989651	1.000000	-
Rv3060c	-	24	139.9	142.2	140.2	146.8	151.3	149.8	-0.003	0.020	0.000	0.064	0.106	0.093	165.1	155.1	156.5	162.6	165.1	175.4	0.85	0.92	0.90	0.90	0.92	0.85	0.954278	1.000000	-
Rv3061c	fadE22	21	150.8	152.5	171.4	167.0	161.8	151.4	-0.179	-0.164	0.000	-0.036	-0.081	-0.174	161.0	177.9	184.6	175.4	174.3	167.3	0.94	0.86	0.93	0.95	0.93	0.90	0.838130	1.000000	-
Rv3062	ligB	18	159.1	152.5	174.7	141.7	113.6	145.2	-0.131	-0.190	0.000	-0.292	-0.599	-0.258	199.7	177.1	202.8	182.2	136.3	163.4	0.80	0.86	0.86	0.78	0.83	0.89	0.904809	1.000000	-
Rv3063	cstA	29	213.6	217.0	199.0	212.6	205.7	219.9	0.100	0.122	0.000	0.093	0.046	0.140	232.3	242.0	209.9	228.4	216.9	236.1	0.92	0.90	0.95	0.93	0.95	0.93	0.959076	1.000000	-
Rv3064c	-	9	73.0	81.9	67.1	84.4	75.5	97.5	0.113	0.270	0.000	0.310	0.160	0.507	85.7	92.2	92.9	103.6	90.6	117.0	0.85	0.89	0.72	0.81	0.83	0.83	0.952709	1.000000	-
Rv3065	mmr	6	192.3	141.7	161.2	142.4	133.5	114.3	0.247	-0.180	0.000	-0.173	-0.263	-0.479	192.3	141.7	175.9	150.8	145.7	124.7	1.00	1.00	0.92	0.94	0.92	0.92	0.866156	1.000000	-
Rv3066	-	10	179.4	175.9	147.5	98.2	111.0	179.8	0.274	0.246	0.000	-0.563	-0.395	0.277	192.2	195.4	184.4	122.8	123.4	199.7	0.93	0.90	0.80	0.80	0.90	0.90	0.334099	1.000000	-
Rv3067	-	8	92.6	94.6	84.1	76.9	102.0	80.4	0.131	0.161	0.000	-0.122	0.264	-0.062	92.6	94.6	84.1	80.2	102.0	80.4	1.00	1.00	1.00	0.96	1.00	1.00	0.746585	1.000000	-
Rv3068c	pgmA	29	179.4	159.0	156.1	175.3	149.5	176.7	0.195	0.026	0.000	0.163	-0.060	0.174	208.0	184.5	181.1	190.6	173.5	189.8	0.86	0.86	0.86	0.92	0.86	0.93	0.933583	1.000000	-
Rv3069	ccrB	4	50.8	36.9	21.1	45.3	40.6	47.2	1.098	0.685	0.000	0.948	0.807	1.003	76.2	36.9	28.1	54.4	40.6	47.2	0.67	1.00	0.75	0.83	1.00	1.00	0.053270	0.494731	-
Rv3070	ccrB	8	118.8	100.2	120.9	121.9	107.7	84.9	-0.024	-0.258	0.000	0.012	-0.159	-0.485	123.9	123.4	138.1	139.3	123.1	90.6	0.96	0.81	0.88	0.88	0.88	0.94	0.905113	1.000000	-
Rv3071	-	13	110.2	114.1	129.3	107.4	89.4	116.6	-0.221	-0.174	0.000	-0.256	-0.509	-0.143	143.3	141.2	160.1	139.6	96.8	131.8	0.77	0.81	0.81	0.77	0.92	0.88	0.601677	1.000000	-
Rv3072c	-	9	116.6	82.7	94.7	96.8	102.7	74.3	0.286	-0.185	0.000	0.030	0.111	-0.330	121.1	87.6	106.6	96.8	102.7	83.6	0.96	0.94	0.89	1.00	1.00	0.89	0.588798	1.000000	-
Rv3073c	-	4	197.6	149.9	178.6	164.7	180.2	192.4	0.142	-0.246	0.000	-0.114	0.013	0.104	197.6	239.8	178.6	179.7	180.2	192.4	1.00	0.62	1.00	0.92	1.00	1.00	0.243981	1.000000	-
Rv3074	-	14	180.5	199.2	209.8	191.6	170.4	171.5	-0.211	-0.073	0.000	-0.127	-0.292	-0.283	204.9	242.4	209.8	206.4	183.5	184.7	0.88	0.82	1.00	0.93	0.93	0.93	0.343125	1.000000	-
Rv3075c	-	12	112.7	126.0	99.1	95.0	120.4	119.8	0.177	0.332	0.000	-0.058	0.268	0.262	126.8	144.1	113.3	114.1	131.3	130.7	0.89	0.88	0.88	0.83	0.92	0.92	0.979018	1.000000	-
Rv3076	-	5	135.1	154.1	120.7	91.9	100.5	110.1	0.156	0.340	0.000	-0.375	-0.252	-0.126	168.8	192.6	150.8	114.9	125.6	122.4	0.80	0.80	0.80	0.80	0.80	0.90	0.966123	1.000000	-
Rv3077	-	34	187.7	162.1	171.7	177.5	169.1	156.0	0.125	-0.081	0.000	0.046	-0.021	-0.134	225.2	190.0	194.6	188.6	191.7	186.1	0.83	0.85	0.88	0.94	0.88	0.84	0.559911	1.000000	-
Rv3078	hab	5	52.7	47.5	85.8	59.5	57.0	83.3	-0.655	-0.789	0.000	-0.494	-0.550	-0.040	56.4	47.5	95.4	63.7	71.3	83.3	0.93	1.00	0.90	0.93	0.80	1.00	0.147250	0.937043	-
Rv3079c	-	15	121.2	107.6	91.2	98.0	113.3	105.9	0.391	0.227	0.000	0.099	0.298	0.205	139.9	124.1	119.0	113.1	136.0	132.4	0.87	0.87	0.77	0.87	0.83	0.80	0.960683	1.000000	-
Rv3080c	pknK	26	163.2	150.5	140.1	153.2	140.9	134.9	0.213	0.099	0.000	0.125	0.008	-0.053	169.7	156.5	155.0	161.5	140.9	140.3	0.96	0.96	0.90	0.95	1.00	0.96	0.684965	1.000000	-
Rv3081	-	16	68.1	72.9	76.6	78.5	56.9	63.7	-0.160	-0.068	0.000	0.032	-0.400	-0.249	81.7	89.7	98.1	89.7	75.8	72.8	0.83	0.81	0.78	0.88	0.75	0.88	0.869728	1.000000	-
Rv3082c	virS	16	136.5	139.9	140.2	109.8	93.4	126.0	-0.037	-0.004	0.000	-0.339	-0.562	-0.149	156.1	186.5	166.2	135.1	119.5	183.2	0.88	0.75	0.84	0.81	0.78	0.69	0.230142	1.000000	-
Rv3083	-	25	157.1	157.4	176.7	153.7	159.7	148.4	-0.165	-0.163	0.000	-0.196	-0.142	-0.245	173.3	163.9	192.1	160.1	166.4	151.4	0.91	0.96	0.92	0.96	0.96	0.98	0.938925	1.000000	-
Rv3084	lipR	11	121.1	85.2	106.1	107.4	118.0	99.1	0.182	-0.300	0.000	0.016	0.146	-0.093	124.9	104.2	116.7	107.4	118.0	109.1	0.97	0.82	0.91	1.00	1.00	0.91	0.214616	1.000000	-
Rv3085	-	4	80.5	82.9	114.1	88.7	51.5	108.7	-0.478	-0.438	0.000	-0.347	-1.077	-0.067	107.4	110.6	130.4	106.4	51.5	108.7	0.75	0.75	0.88	0.83	1.00	1.00	0.297963	1.000000	-
Rv3086	adhD	9	108.9	134.2	128.1	118.4	123.3	125.6	-0.225	0.065	0.000	-0.110	-0.053	-0.028	140.0	161.1	192.2	139.0	130.6	132.9	0.78	0.83	0.67	0.85	0.94	0.94	0.706898	1.000000	-
Rv3087	-	12	305.9	258.7	253.2	277.1	215.3	268.8	0.268	0.030	0.000	0.128	-0.229	0.085	305.9	258.7	253.2	277.1	215.3	268.8	1.00	1.00	1.00	1.00	1.00	1.00	0.422001	1.000000	-
Rv3088	-	13	122.2	111.4	139.7	112.6	148.3	125.1	-0.186	-0.313	0.000	-0.299	0.083	-0.153	132.4	144.9	172.9	125.4	160.6	141.4	0.92	0.77	0.81	0.90	0.92	0.88	0.409661	1.000000	-
Rv3089	fadD13	20	130.9	107.3	129.0	118.3	132.9	109.7	0.021	-0.255	0.000	-0.120	0.041	-0.225	151.1	130.0	166.4	131.4	156.3	125.3	0.87	0.82	0.78	0.90	0.85	0.88	0.870358	1.000000	-
Rv3090	-	7	192.2	191.1	159.3	198.7	196.2	215.3	0.263	0.255	0.000	0.310	0.292	0.423	192.2	191.1	171.6	198.7	196.2	215.3	1.00	1.00	0.93	1.00	1.00	1.00	0.863967	1.000000	-
Rv3091	-	15	231.0	201.6	235.9	242.4	220.6	223.7	-0.029	-0.221	0.000	0.038	-0.094	-0.075	247.6	216.0	252.7	242.4	236.4	239.6	0.93	0.93	0.93	1.00	0.93	0.93	0.796057	1.000000	-
Rv3092c	-	9	397.6	371.7	418.8	395.2	336.3	362.5	-0.074	-0.170	0.000	-0.082	-0.312	-0.206	397.6	371.7	418.8	395.2	378.4	383.8	1.00	1.00	1.00	1.00	0.89	0.94	0.544219	1.000000	-
Rv3093c	-	13	191.2	197.6	227.4	181.2	179.6	177.5	-0.244	-0.198	0.000	-0.320	-0.332	-0.349	207.1	214.1	246.4	214.1	194.6	177.5	0.92	0.92	0.92	0.85	0.92	1.00	0.720131	1.000000	-
Rv3094c	-	10	286.0	231.9	275.0	231.5	238.0	223.7	0.055	-0.241	0.000	-0.244	-0.205	-0.292	317.7	331.2	305.6	257.2	297.4	235.4	0.90	0.70	0.90	0.90	0.80	0.95	0.400098	1.000000	-
Rv3095	-	6	243.7	257.4	216.8	277.8	210.4	288.2	0.166	0.243	0.000	0.351	-0.042	0.403	258.1	257.4	236.5	277.8	210.4	288.2	0.94	1.00	0.92	1.00	1.00	1.00	0.880631	1.000000	-
Rv3096	-	14	254.7	293.1	236.8	249.6	265.0	255.3	0.103	0.302	0.000	0.074	0.159	0.106	260.9	293.1	255.1	255.7	274.8	264.8	0.98	1.00	0.93	0.98	0.96	0.96	0.954786	1.000000	-
Rv3097c	PE_PGRS63	24	168.8	164.7	159.9	166.4	163.6	181.1	0.075	0.041	0.000	0.056	0.032	0.175	178.7	164.7	159.9	173.6	167.1	181.1	0.94	1.00	1.00	0.96	0.98	1.00	0.481811	1.000000	-
Rv3098c	-	8	116.2	122.0	120.7	113.4	107.1	128.9	-0.053	0.015	0.000	-0.086	-0.166	0.091	126.7	122.0	120.7	123.8	122.3	171.8	0.92	1.00	1.00	0.92	0.88	0.75	0.212202	1.000000	-
Rv3099c	-	5	319.7	327.9	362.5	365.1	326.6	376.4	-0.179	-0.143	0.000	0.010	-0.149	0.054	319.7	327.9	362.5	365.1	326.6	376.4	1.00	1.00	1.00	1.00	1.00	1.00	0.976571	1.000000	-
Rv3100c	smpB	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3101c	ftsX	14	26.2	38.6	31.9	52.6	46.6	32.0	-0.242	0.242	0.000	0.644	0.485	0.004	50.0	67.5	63.7	100.4	68.6	47.1	0.52	0.57	0.50	0.52	0.68	0.68	0.089813	0.697233	-
Rv3102c	ftsE	6	58.1	64.3	61.6	56.1	74.0	53.0	-0.078	0.058	0.000	-0.123	0.247	-0.199	87.1	70.1	82.1	67.3	80.7	53.0	0.67	0.92	0.75	0.83	0.92	1.00	0.454533	1.000000	-
Rv3103c	-	7	54.8	52.2	58.6	55.4	63.7	62.1	-0.090	-0.152	0.000	-0.075	0.111	0.078	63.9	66.5	74.6	68.4	74.3	79.1	0.86	0.79	0.79	0.81	0.86	0.79	0.993615	1.000000	-
Rv3104c	-	9	211.5	197.1	241.4	182.0	241.8	209.3	-0.187	-0.285	0.000	-0.398	0.002	-0.201	219.6	197.1	255.6	204.7	256.0	251.1	0.96	1.00	0.94	0.89	0.94	0.83	0.619442	1.000000	-
Rv3105c	prfB	15	0.0	0.0	0.0	0.0	0.3	0.0	0.000	0.000	0.000	0.000	0.084	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.03	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3106	fprA	16	107.7	122.1	118.3	112.3	123.5	114.6	-0.130	0.043	0.000	-0.071	0.060	-0.043	132.5	150.2	140.2	128.4	131.7	126.5	0.81	0.81	0.84	0.88	0.94	0.91	0.947041	1.000000	-
Rv3107c	agpS	21	95.6	85.2	98.3	86.8	104.8	97.4	-0.039	-0.196	0.000	-0.171	0.088	-0.013	115.8	94.2	108.7	95.9	112.9	97.4	0.83	0.90	0.90	0.90	0.93	1.00	0.245266	1.000000	-
Rv3108	-	6	67.1	69.8	71.4	79.1	84.5	73.7	-0.083	-0.030	0.000	0.138	0.228	0.043	93.0	83.8	85.7	94.9	126.8	88.4	0.72	0.83	0.83	0.83	0.67	0.83	0.864279	1.000000	-
Rv3109	moaA1	34	21.2	22.4	29.0	39.3	37.7	43.2	-0.378	-0.312	0.000	0.379	0.328	0.501	43.2	49.2	58.1	59.8	59.7	73.4	0.49	0.46	0.50	0.66	0.63	0.59	0.011967	0.158104	-
Rv3110	moaB1	9	94.6	91.8	93.1	105.0	106.9	107.3	0.021	-0.018	0.000	0.165	0.190	0.195	127.7	137.8	104.7	123.2	160.3	137.9	0.74	0.67	0.89	0.85	0.67	0.78	0.526011	1.000000	-
Rv3111	moaC	13	7.2	4.3	4.3	4.4	7.4	8.6	0.389	-0.002	0.000	0.005	0.407	0.540	23.4	16.0	22.5	17.0	16.0	14.8	0.31	0.27	0.19	0.26	0.46	0.58	0.121621	0.828100	-
Rv3112	moaD1	5	15.4	21.4	8.1	13.1	11.7	12.8	0.632	1.005	0.000	0.464	0.348	0.436	38.4	42.8	27.2	19.7	23.5	18.3	0.40	0.50	0.30	0.67	0.50	0.70	0.230630	1.000000	-
Rv3113	-	7	23.2	43.5	26.3	28.4	26.2	33.0	-0.148	0.631	0.000	0.094	-0.006	0.279	40.7	46.8	36.8	39.8	45.8	46.2	0.57	0.93	0.71	0.71	0.57	0.71	0.490623	1.000000	-
Rv3114	-	8	63.6	52.4	72.3	88.3	62.4	35.8	-0.171	-0.429	0.000	0.272	-0.197	-0.921	69.4	69.8	72.3	88.3	66.5	57.3	0.92	0.75	1.00	1.00	0.94	0.62	0.005991	0.091938	-
Rv3115	-	15	248.7	252.1	283.0	265.7	241.8	235.6	-0.183	-0.164	0.000	-0.090	-0.223	-0.259	279.8	280.1	292.8	265.7	241.8	235.6	0.89	0.90	0.97	1.00	1.00	1.00	0.170935	1.000000	-
Rv3116	moeB2	25	102.4	108.9	100.9	103.8	94.2	117.5	0.020	0.106	0.000	0.039	-0.094	0.210	125.9	123.8	136.3	114.5	114.9	127.7	0.81	0.88	0.74	0.91	0.82	0.92	0.560993	1.000000	-
Rv3117	cysA3	14	165.1	209.4	182.5	203.6	196.2	204.4	-0.140	0.193	0.000	0.154	0.102	0.159	169.2	209.4	182.5	203.6	196.2	204.4	0.98	1.00	1.00	1.00	1.00	1.00	0.892821	1.000000	-
Rv3118	sseC1	2	277.6	318.3	283.0	329.7	316.6	204.4	-0.027	0.167	0.000	0.217	0.159	-0.460	277.6	318.3	283.0	329.7	316.6	204.4	1.00	1.00	1.00	1.00	1.00	1.00	0.432608	1.000000	-
Rv3119	moaE1	10	84.7	90.8	92.8	94.2	104.5	99.7	-0.125	-0.030	0.000	0.020	0.162	0.097	84.7	90.8	97.7	94.2	104.5	99.7	1.00	1.00	0.95	1.00	1.00	1.00	0.739359	1.000000	-
Rv3120	-	9	64.6	70.5	73.0	71.5	62.0	82.7	-0.164	-0.046	0.000	-0.028	-0.218	0.170	79.2	79.3	93.8	77.2	79.8	106.3	0.81	0.89	0.78	0.93	0.78	0.78	0.813817	1.000000	-
Rv3121	cyp141	23	102.2	114.7	96.0	100.4	102.6	103.7	0.087	0.246	0.000	0.062	0.092	0.106	150.1	164.9	142.4	130.8	134.9	144.5	0.68	0.70	0.67	0.77	0.76	0.72	0.986875	1.000000	-
Rv3122	-	5	504.5	430.7	467.8	488.9	468.5	463.2	0.108	-0.118	0.000	0.063	0.002	-0.014	504.5	430.7	467.8	488.9	468.5	463.2	1.00	1.00	1.00	1.00	1.00	1.00	0.996854	1.000000	-
Rv3123	-	4	194.7	241.9	184.0	199.2	159.3	158.8	0.080	0.386	0.000	0.112	-0.201	-0.206	259.7	276.5	210.2	217.3	212.4	211.7	0.75	0.88	0.88	0.92	0.75	0.75	0.964867	1.000000	-
Rv3124	-	27	35.9	40.5	47.3	46.6	56.4	48.3	-0.355	-0.201	0.000	-0.020	0.230	0.025	52.0	57.6	67.3	65.1	78.1	57.9	0.69	0.70	0.70	0.72	0.72	0.83	0.322759	1.000000	-
Rv3125c	PPE49	21	142.0	119.5	135.5	125.3	133.7	125.8	0.065	-0.174	0.000	-0.109	-0.018	-0.103	157.0	135.7	167.4	133.8	140.4	135.5	0.90	0.88	0.81	0.94	0.95	0.93	0.822490	1.000000	-
Rv3126c	-	2	54.5	33.0	43.6	29.7	56.4	47.2	0.293	-0.355	0.000	-0.487	0.336	0.104	54.5	44.0	43.6	29.7	75.1	63.0	1.00	0.75	1.00	1.00	0.75	0.75	0.164087	0.993726	-
Rv3127	-	16	41.8	41.8	39.5	40.5	33.5	48.2	0.073	0.075	0.000	0.034	-0.207	0.259	87.2	83.7	84.2	81.1	76.6	90.7	0.48	0.50	0.47	0.50	0.44	0.53	0.999378	1.000000	-
Rv3129	-	4	52.0	20.5	46.0	55.7	70.8	36.6	0.159	-1.001	0.000	0.251	0.570	-0.297	69.3	23.4	61.4	83.6	80.9	58.5	0.75	0.88	0.75	0.67	0.88	0.62	0.167756	0.995413	-
Rv3130c	-	24	133.4	93.2	124.5	131.4	98.6	105.0	0.096	-0.399	0.000	0.076	-0.322	-0.235	160.1	111.8	132.8	169.0	112.7	117.3	0.83	0.83	0.94	0.78	0.88	0.90	0.114025	0.795442	-
Rv3131	-	14	53.4	33.5	63.7	54.0	43.5	43.5	-0.234	-0.835	0.000	-0.218	-0.501	-0.504	80.1	44.7	93.9	75.7	50.8	57.9	0.67	0.75	0.68	0.71	0.86	0.75	0.197346	1.000000	-
Rv3132c	devS	29	76.8	69.2	87.0	77.7	71.1	62.8	-0.169	-0.311	0.000	-0.154	-0.274	-0.440	101.3	97.8	112.1	102.4	85.9	72.9	0.76	0.71	0.78	0.76	0.83	0.86	0.534933	1.000000	-
Rv3133c	devR	11	166.1	113.9	162.7	141.3	137.0	145.3	0.028	-0.496	0.000	-0.197	-0.240	-0.159	182.7	119.4	179.0	160.8	143.6	152.2	0.91	0.95	0.91	0.88	0.95	0.95	0.896037	1.000000	-
Rv3134c	-	5	136.8	123.6	146.8	156.8	144.1	164.0	-0.098	-0.239	0.000	0.092	-0.026	0.155	146.5	123.6	163.1	156.8	144.1	164.0	0.93	1.00	0.90	1.00	1.00	1.00	0.892870	1.000000	-
Rv3135	PPE50	7	207.2	170.3	190.6	143.6	160.6	176.1	0.117	-0.158	0.000	-0.397	-0.240	-0.111	241.7	183.4	205.3	150.7	187.4	205.5	0.86	0.93	0.93	0.95	0.86	0.86	0.773589	1.000000	-
Rv3136	PPE51	17	52.6	52.8	50.2	36.2	51.4	46.9	0.060	0.066	0.000	-0.423	0.030	-0.089	62.4	56.1	56.9	41.0	54.6	51.5	0.84	0.94	0.88	0.88	0.94	0.91	0.637983	1.000000	-
Rv3137	-	7	0.6	0.0	0.9	0.0	1.0	0.0	-0.088	-0.239	0.000	-0.239	0.033	-0.239	11.6	0.0	12.6	0.0	14.5	0.0	0.05	0.00	0.07	0.00	0.07	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3138	pflA	21	76.9	73.6	88.7	74.7	76.2	93.1	-0.193	-0.253	0.000	-0.233	-0.207	0.066	93.2	75.4	106.4	84.1	84.2	97.7	0.83	0.98	0.83	0.89	0.90	0.95	0.343802	1.000000	-
Rv3139	fadE24	20	82.8	35.7	79.9	11.7	27.8	21.0	0.049	-1.059	0.000	-2.343	-1.372	-1.709	101.4	43.3	96.8	25.1	37.1	28.9	0.82	0.82	0.82	0.47	0.75	0.72	0.000000	0.000000	-
Rv3140	fadE23	18	31.9	15.8	53.6	3.9	8.8	11.4	-0.666	-1.495	0.000	-2.710	-2.083	-1.840	50.7	27.0	83.8	14.2	17.7	19.5	0.63	0.58	0.64	0.28	0.50	0.58	0.000000	0.000000	-
Rv3141	fadB4	13	101.6	128.6	129.1	123.5	114.0	139.2	-0.330	-0.005	0.000	-0.062	-0.172	0.105	101.6	128.6	134.2	133.8	123.5	139.2	1.00	1.00	0.96	0.92	0.92	1.00	0.035179	0.368413	-
Rv3142c	-	9	46.1	55.3	59.3	52.3	44.6	40.6	-0.332	-0.092	0.000	-0.166	-0.375	-0.496	124.5	99.6	118.6	100.9	89.2	81.2	0.37	0.56	0.50	0.52	0.50	0.50	0.996921	1.000000	-
Rv3143	-	4	5.1	1.3	1.6	3.6	8.8	8.9	0.624	-0.073	0.000	0.393	1.070	1.084	20.5	10.0	12.6	21.8	23.5	14.3	0.25	0.12	0.12	0.17	0.38	0.62	0.274461	1.000000	-
Rv3144c	PPE52	15	255.9	247.1	227.5	274.5	237.4	223.5	0.166	0.117	0.000	0.266	0.060	-0.025	261.7	247.1	262.5	308.9	254.4	239.5	0.98	1.00	0.87	0.89	0.93	0.93	0.422391	1.000000	-
Rv3145	nuoA	10	204.5	209.9	222.0	244.0	207.9	192.5	-0.116	-0.079	0.000	0.134	-0.092	-0.201	204.5	209.9	222.0	244.0	207.9	192.5	1.00	1.00	1.00	1.00	1.00	1.00	0.899542	1.000000	-
Rv3146	nuoB	9	185.1	172.4	141.0	197.4	173.3	158.4	0.381	0.281	0.000	0.471	0.288	0.162	208.2	193.9	158.6	231.8	208.0	158.4	0.89	0.89	0.89	0.85	0.83	1.00	0.689565	1.000000	-
Rv3147	nuoC	12	90.5	90.8	93.8	83.5	89.4	86.5	-0.049	-0.044	0.000	-0.158	-0.065	-0.110	98.7	99.1	107.2	94.0	93.3	90.3	0.92	0.92	0.88	0.89	0.96	0.96	0.996956	1.000000	-
Rv3148	nuoD	22	36.5	37.7	31.5	34.2	36.4	35.8	0.184	0.224	0.000	0.100	0.180	0.158	52.4	53.5	53.4	61.0	53.4	47.7	0.70	0.70	0.59	0.56	0.68	0.75	0.704320	1.000000	-
Rv3149	nuoE	9	299.3	281.6	325.8	302.0	255.0	221.8	-0.121	-0.207	0.000	-0.108	-0.347	-0.544	310.8	281.6	345.0	302.0	255.0	221.8	0.96	1.00	0.94	1.00	1.00	1.00	0.851279	1.000000	-
Rv3150	nuoF	25	150.1	129.6	143.1	129.5	130.9	127.3	0.067	-0.138	0.000	-0.139	-0.123	-0.163	170.6	150.7	146.0	136.8	145.5	135.4	0.88	0.86	0.98	0.95	0.90	0.94	0.360651	1.000000	-
Rv3151	nuoG	29	104.3	77.2	108.3	104.2	100.2	86.4	-0.053	-0.463	0.000	-0.053	-0.108	-0.311	135.4	101.8	136.6	124.2	126.3	100.2	0.77	0.76	0.79	0.84	0.79	0.86	0.633196	1.000000	-
Rv3152	nuoH	25	103.0	103.1	101.8	111.7	111.8	114.6	0.016	0.017	0.000	0.128	0.130	0.164	104.4	103.1	108.3	116.4	114.1	114.6	0.99	1.00	0.94	0.96	0.98	1.00	0.359403	1.000000	-
Rv3153	nuoI	22	176.5	165.8	157.8	141.3	153.6	136.6	0.157	0.069	0.000	-0.154	-0.037	-0.201	208.0	182.4	192.9	166.5	187.8	171.8	0.85	0.91	0.82	0.85	0.82	0.80	0.918982	1.000000	-
Rv3154	nuoJ	9	175.3	156.9	163.0	163.2	155.7	115.2	0.102	-0.053	0.000	0.002	-0.064	-0.483	175.3	156.9	163.0	163.2	155.7	115.2	1.00	1.00	1.00	1.00	1.00	1.00	0.303432	1.000000	-
Rv3155	nuoK	5	46.7	64.2	42.4	36.3	60.2	50.2	0.125	0.544	0.000	-0.201	0.459	0.219	53.9	80.2	53.0	45.3	75.3	62.8	0.87	0.80	0.80	0.80	0.80	0.80	0.351254	1.000000	-
Rv3156	nuoL	29	115.4	132.8	123.5	134.4	118.9	115.6	-0.094	0.101	0.000	0.117	-0.053	-0.092	149.9	157.2	140.5	149.9	140.7	149.0	0.77	0.84	0.88	0.90	0.84	0.78	0.527286	1.000000	-
Rv3157	nuoM	31	76.5	62.3	70.7	62.9	63.3	64.0	0.107	-0.170	0.000	-0.157	-0.150	-0.134	98.9	77.2	84.3	79.1	76.9	73.5	0.77	0.81	0.84	0.80	0.82	0.87	0.925809	1.000000	-
Rv3158	nuoN	30	235.9	217.8	211.1	224.2	223.9	207.1	0.157	0.044	0.000	0.085	0.083	-0.027	252.8	229.3	218.4	246.1	231.6	218.0	0.93	0.95	0.97	0.91	0.97	0.95	0.902200	1.000000	-
Rv3159c	PPE53	23	146.5	132.9	105.9	119.8	94.8	112.6	0.449	0.314	0.000	0.169	-0.153	0.084	326.1	218.3	203.1	229.5	167.7	178.6	0.45	0.61	0.52	0.52	0.57	0.63	0.813716	1.000000	-
Rv3160c	-	7	41.4	43.6	22.4	19.5	19.0	49.8	0.761	0.828	0.000	-0.161	-0.192	1.002	57.9	67.8	52.2	40.9	33.2	77.4	0.71	0.64	0.43	0.48	0.57	0.64	0.455394	1.000000	-
Rv3161c	-	19	132.6	163.8	149.9	147.4	141.3	146.7	-0.171	0.124	0.000	-0.024	-0.082	-0.030	175.7	177.8	189.8	168.0	153.4	164.0	0.75	0.92	0.79	0.88	0.92	0.89	0.749789	1.000000	-
Rv3162c	-	6	129.6	137.6	107.3	135.1	141.6	164.9	0.261	0.344	0.000	0.318	0.384	0.597	212.0	206.4	143.1	162.1	170.0	179.9	0.61	0.67	0.75	0.83	0.83	0.92	0.873021	1.000000	-
Rv3163c	-	14	191.1	158.3	151.2	164.5	165.1	152.8	0.328	0.064	0.000	0.118	0.124	0.015	267.5	233.3	249.0	265.8	243.4	194.4	0.71	0.68	0.61	0.62	0.68	0.79	0.964045	1.000000	-
Rv3164c	moxR3	10	118.2	84.1	82.5	101.1	84.2	84.9	0.494	0.027	0.000	0.279	0.028	0.040	136.4	129.4	109.9	112.3	93.5	94.3	0.87	0.65	0.75	0.90	0.90	0.90	0.468155	1.000000	-
Rv3165c	-	2	44.4	12.9	20.4	32.7	43.3	25.0	0.961	-0.501	0.000	0.572	0.929	0.240	44.4	17.2	40.7	32.7	43.3	25.0	1.00	0.75	0.50	1.00	1.00	1.00	0.089366	0.696425	-
Rv3166c	-	10	122.6	108.2	119.5	116.9	99.5	130.9	0.036	-0.137	0.000	-0.030	-0.252	0.127	141.5	120.2	119.5	116.9	104.7	130.9	0.87	0.90	1.00	1.00	0.95	1.00	0.241945	1.000000	-
Rv3167c	-	9	138.9	155.2	130.1	149.5	143.5	120.5	0.091	0.246	0.000	0.193	0.136	-0.106	170.4	174.6	130.1	161.4	143.5	155.0	0.81	0.89	1.00	0.93	1.00	0.78	0.156059	0.965386	-
Rv3168	-	18	71.4	72.6	95.1	71.1	86.9	74.2	-0.390	-0.366	0.000	-0.396	-0.123	-0.338	91.8	81.7	114.1	91.4	107.9	86.2	0.78	0.89	0.83	0.78	0.81	0.86	0.821806	1.000000	-
Rv3169	-	15	50.4	67.5	56.7	61.4	55.8	50.2	-0.155	0.233	0.000	0.108	-0.020	-0.160	119.3	112.4	130.7	125.6	111.6	71.7	0.42	0.60	0.43	0.49	0.50	0.70	0.673070	1.000000	-
Rv3170	aofH	16	52.9	46.1	55.8	69.8	56.5	57.2	-0.070	-0.250	0.000	0.300	0.017	0.033	66.8	64.1	81.1	74.5	67.0	70.4	0.79	0.72	0.69	0.94	0.84	0.81	0.286239	1.000000	-
Rv3171c	hpx	12	239.6	225.5	190.1	199.8	183.9	184.0	0.326	0.240	0.000	0.070	-0.047	-0.046	287.5	235.3	198.4	266.4	220.7	220.8	0.83	0.96	0.96	0.75	0.83	0.83	0.317992	1.000000	-
Rv3172c	-	15	54.6	72.2	57.3	56.2	50.5	65.5	-0.063	0.310	0.000	-0.025	-0.167	0.178	74.5	83.3	68.7	66.6	50.5	67.7	0.73	0.87	0.83	0.84	1.00	0.97	0.031559	0.338497	-
Rv3173c	-	7	87.8	70.6	82.8	74.8	80.6	62.8	0.079	-0.215	0.000	-0.138	-0.037	-0.373	102.4	89.9	105.4	112.2	102.5	73.3	0.86	0.79	0.79	0.67	0.79	0.86	0.903311	1.000000	-
Rv3174	-	10	162.2	139.2	172.1	143.6	138.2	157.2	-0.083	-0.296	0.000	-0.253	-0.307	-0.127	180.2	174.0	202.5	187.3	184.2	165.4	0.90	0.80	0.85	0.77	0.75	0.95	0.759059	1.000000	-
Rv3175	-	17	188.9	167.2	187.9	137.7	160.6	153.2	0.007	-0.164	0.000	-0.435	-0.220	-0.287	205.0	177.6	206.1	146.3	170.7	162.7	0.92	0.94	0.91	0.94	0.94	0.94	0.981808	1.000000	-
Rv3176c	mesT	13	179.0	206.7	173.0	198.1	199.1	174.8	0.048	0.250	0.000	0.190	0.197	0.014	183.7	223.9	179.9	214.6	215.7	181.7	0.97	0.92	0.96	0.92	0.92	0.96	0.853670	1.000000	-
Rv3177	-	7	47.6	61.2	44.2	44.4	51.2	52.8	0.096	0.430	0.000	0.007	0.192	0.234	58.7	71.5	56.2	58.3	55.1	67.2	0.81	0.86	0.79	0.76	0.93	0.79	0.923503	1.000000	-
Rv3178	-	7	40.9	55.3	63.0	38.7	49.0	63.5	-0.568	-0.173	0.000	-0.637	-0.333	0.010	57.2	96.8	98.0	58.1	68.6	88.9	0.71	0.57	0.64	0.67	0.71	0.71	0.366134	1.000000	-
Rv3179	-	13	194.9	222.9	214.8	213.3	219.5	222.4	-0.137	0.053	0.000	-0.010	0.031	0.049	194.9	241.5	214.8	213.3	219.5	222.4	1.00	0.92	1.00	1.00	1.00	1.00	0.339080	1.000000	-
Rv3180c	-	5	180.4	185.7	178.9	166.7	165.5	150.7	0.011	0.052	0.000	-0.100	-0.109	-0.241	193.3	185.7	178.9	178.6	165.5	150.7	0.93	1.00	1.00	0.93	1.00	1.00	0.961098	1.000000	-
Rv3181c	-	6	58.3	39.7	35.9	42.3	28.4	25.8	0.628	0.127	0.000	0.208	-0.294	-0.409	80.7	59.5	107.8	152.2	85.2	77.5	0.72	0.67	0.33	0.28	0.33	0.33	0.017469	0.211855	-
Rv3182	-	1	51.1	61.2	25.2	78.9	81.2	51.4	0.892	1.130	0.000	1.471	1.511	0.899	51.1	61.2	50.5	78.9	81.2	51.4	1.00	1.00	0.50	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3183	-	3	284.9	252.6	273.0	196.3	220.2	205.8	0.061	-0.110	0.000	-0.466	-0.304	-0.399	284.9	252.6	273.0	196.3	220.2	205.8	1.00	1.00	1.00	1.00	1.00	1.00	0.827018	1.000000	-
Rv3184	-	4	208.2	253.1	256.8	252.8	248.7	187.8	-0.296	-0.020	0.000	-0.022	-0.045	-0.441	208.2	253.1	256.8	252.8	248.7	187.8	1.00	1.00	1.00	1.00	1.00	1.00	0.874732	1.000000	-
Rv3185	-	21	288.7	290.7	325.0	302.0	288.9	296.1	-0.168	-0.159	0.000	-0.104	-0.167	-0.132	379.0	348.8	379.2	352.4	346.7	327.2	0.76	0.83	0.86	0.86	0.83	0.90	0.975480	1.000000	-
Rv3186	-	4	193.2	238.4	184.9	252.4	222.2	169.5	0.062	0.358	0.000	0.439	0.258	-0.122	210.8	238.4	184.9	252.4	222.2	169.5	0.92	1.00	1.00	1.00	1.00	1.00	0.834339	1.000000	-
Rv3187	-	21	271.6	291.1	335.8	308.7	268.3	280.7	-0.301	-0.203	0.000	-0.120	-0.318	-0.255	349.2	349.3	427.4	381.4	341.5	310.2	0.78	0.83	0.79	0.81	0.79	0.90	0.913657	1.000000	-
Rv3188	-	6	94.5	150.1	108.7	96.8	103.7	121.7	-0.193	0.449	0.000	-0.159	-0.064	0.157	94.5	150.1	130.4	96.8	103.7	121.7	1.00	1.00	0.83	1.00	1.00	1.00	0.365251	1.000000	-
Rv3189	-	8	194.3	134.3	154.1	144.3	156.8	162.9	0.325	-0.192	0.000	-0.092	0.025	0.077	202.7	153.5	154.1	144.3	156.8	162.9	0.96	0.88	1.00	1.00	1.00	1.00	0.592820	1.000000	-
Rv3190c	-	20	171.4	183.6	162.0	150.6	167.3	179.4	0.080	0.176	0.000	-0.102	0.046	0.143	180.5	198.4	175.1	158.5	171.6	179.4	0.95	0.93	0.93	0.95	0.97	1.00	0.767169	1.000000	-
Rv3191c	-	15	120.9	132.7	112.8	140.3	132.3	145.6	0.097	0.226	0.000	0.304	0.222	0.355	120.9	132.7	112.8	140.3	132.3	145.6	1.00	1.00	1.00	1.00	1.00	1.00	0.696624	1.000000	-
Rv3192	-	4	171.9	192.8	159.7	158.4	168.6	196.4	0.103	0.264	0.000	-0.012	0.076	0.290	171.9	192.8	159.7	158.4	168.6	196.4	1.00	1.00	1.00	1.00	1.00	1.00	0.967603	1.000000	-
Rv3193c	-	79	19.1	32.4	23.8	40.6	49.1	28.4	-0.253	0.377	0.000	0.663	0.911	0.217	34.4	40.6	41.7	48.1	57.1	34.0	0.56	0.80	0.57	0.84	0.86	0.84	0.000000	0.000000	-
Rv3194c	-	12	174.0	176.6	193.8	205.1	186.0	186.0	-0.151	-0.130	0.000	0.080	-0.058	-0.058	179.0	176.6	193.8	205.1	186.0	186.0	0.97	1.00	1.00	1.00	1.00	1.00	0.953043	1.000000	-
Rv3195	-	15	161.2	148.8	147.6	156.1	158.8	165.0	0.124	0.011	0.000	0.078	0.102	0.156	172.8	159.4	158.1	159.6	176.4	165.0	0.93	0.93	0.93	0.98	0.90	1.00	0.788518	1.000000	-
Rv3196	-	8	254.7	180.0	212.0	253.7	246.7	249.9	0.259	-0.230	0.000	0.253	0.214	0.232	265.8	180.0	212.0	253.7	246.7	249.9	0.96	1.00	1.00	1.00	1.00	1.00	0.887451	1.000000	-
Rv3196A	-	1	376.1	326.8	371.6	333.1	324.1	302.9	0.017	-0.183	0.000	-0.156	-0.194	-0.291	376.1	326.8	371.6	333.1	324.1	302.9	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3197	-	18	167.9	136.2	143.7	145.9	145.3	147.1	0.218	-0.075	0.000	0.021	0.016	0.032	181.4	140.1	152.2	151.5	149.5	147.1	0.93	0.97	0.94	0.96	0.97	1.00	0.861483	1.000000	-
Rv3197A	whiB7	3	183.8	211.5	154.6	229.8	188.1	190.3	0.242	0.439	0.000	0.557	0.274	0.291	275.7	317.2	185.6	229.8	188.1	228.4	0.67	0.67	0.83	1.00	1.00	0.83	0.558744	1.000000	-
Rv3198c	uvrD2	30	13.1	19.5	12.1	16.4	21.6	18.2	0.080	0.519	0.000	0.323	0.639	0.440	78.3	64.9	120.8	98.2	76.2	90.9	0.17	0.30	0.10	0.17	0.28	0.20	0.434214	1.000000	-
Rv3198A	-	6	286.5	330.5	259.8	365.4	325.9	294.7	0.139	0.342	0.000	0.484	0.321	0.179	286.5	330.5	283.4	365.4	325.9	294.7	1.00	1.00	0.92	1.00	1.00	1.00	0.892786	1.000000	-
Rv3199c	nudC	7	253.5	290.1	281.9	280.7	244.9	236.1	-0.150	0.041	0.000	-0.006	-0.199	-0.251	266.2	290.1	281.9	280.7	244.9	236.1	0.95	1.00	1.00	1.00	1.00	1.00	0.983614	1.000000	-
Rv3200c	-	13	73.5	89.8	74.5	85.9	93.9	87.9	-0.019	0.254	0.000	0.192	0.314	0.224	92.5	106.2	102.0	101.5	97.6	99.3	0.79	0.85	0.73	0.85	0.96	0.88	0.802367	1.000000	-
Rv3201c	-	38	143.3	124.1	126.8	151.4	134.8	136.5	0.170	-0.030	0.000	0.246	0.085	0.102	171.9	142.9	150.6	179.7	152.9	146.1	0.83	0.87	0.84	0.84	0.88	0.93	0.750179	1.000000	-
Rv3202c	-	27	281.1	278.1	266.4	287.1	289.2	269.2	0.076	0.061	0.000	0.106	0.116	0.015	295.7	300.3	293.6	305.9	300.3	285.1	0.95	0.93	0.91	0.94	0.96	0.94	0.995022	1.000000	-
Rv3203	lipV	12	80.4	96.5	67.3	82.7	80.6	93.8	0.240	0.489	0.000	0.278	0.244	0.450	90.4	96.5	76.9	85.0	87.9	93.8	0.89	1.00	0.88	0.97	0.92	1.00	0.423479	1.000000	-
Rv3204	-	4	136.9	123.6	153.1	109.1	120.0	154.8	-0.156	-0.298	0.000	-0.471	-0.339	0.015	149.3	123.6	153.1	109.1	120.0	154.8	0.92	1.00	1.00	1.00	1.00	1.00	0.792276	1.000000	-
Rv3205c	-	10	44.5	100.5	50.6	84.2	121.8	61.9	-0.168	0.925	0.000	0.683	1.190	0.268	60.6	111.7	72.3	87.1	128.2	65.2	0.73	0.90	0.70	0.97	0.95	0.95	0.010875	0.146596	-
Rv3206c	moeB1	22	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3207c	-	14	203.7	199.2	194.7	195.9	213.8	209.8	0.064	0.032	0.000	0.009	0.132	0.105	244.5	206.6	247.8	216.6	213.8	217.6	0.83	0.96	0.79	0.90	1.00	0.96	0.380327	1.000000	-
Rv3208	-	9	0.0	0.0	0.0	1.0	0.0	0.0	0.000	0.000	0.000	0.254	0.000	0.000	0.0	0.0	0.0	13.0	0.0	0.0	0.00	0.00	0.00	0.07	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3208A	TB9.4	4	120.0	129.6	61.1	165.7	135.5	102.3	0.919	1.026	0.000	1.369	1.088	0.699	120.0	129.6	69.8	165.7	135.5	102.3	1.00	1.00	0.88	1.00	1.00	1.00	0.016049	0.200108	-
Rv3209	-	9	282.6	284.5	298.6	280.9	277.3	252.8	-0.078	-0.068	0.000	-0.087	-0.105	-0.236	305.2	284.5	298.6	280.9	277.3	252.8	0.93	1.00	1.00	1.00	1.00	1.00	0.836332	1.000000	-
Rv3210c	-	10	11.6	27.5	10.6	18.8	17.6	26.8	0.086	1.058	0.000	0.606	0.534	1.025	23.1	29.0	21.2	33.1	25.2	33.4	0.50	0.95	0.50	0.57	0.70	0.80	0.010403	0.143109	-
Rv3211	rhlE	21	112.2	114.1	101.3	81.6	78.7	97.9	0.141	0.165	0.000	-0.296	-0.345	-0.047	130.9	129.6	125.1	102.8	100.1	111.1	0.86	0.88	0.81	0.79	0.79	0.88	0.809287	1.000000	-
Rv3212	-	18	7.0	22.9	6.2	9.1	9.7	14.8	0.090	1.309	0.000	0.331	0.386	0.815	17.9	25.7	20.4	19.0	18.4	21.3	0.39	0.89	0.31	0.48	0.53	0.69	0.000005	0.000169	-
Rv3213c	-	8	186.6	260.8	236.7	238.8	227.3	201.7	-0.335	0.137	0.000	0.012	-0.057	-0.226	186.6	260.8	236.7	238.8	227.3	201.7	1.00	1.00	1.00	1.00	1.00	1.00	0.794217	1.000000	-
Rv3214	gpm2	10	22.7	53.0	49.4	63.8	68.8	41.5	-0.974	0.094	0.000	0.339	0.440	-0.225	37.8	66.3	65.8	70.9	68.8	51.9	0.60	0.80	0.75	0.90	1.00	0.80	0.006559	0.098378	-
Rv3215	entC	15	18.8	22.3	45.7	128.9	98.3	14.8	-1.091	-0.892	0.000	1.400	1.025	-1.361	30.3	31.9	59.7	131.8	98.3	21.1	0.62	0.70	0.77	0.98	1.00	0.70	0.000000	0.000000	-
Rv3216	-	6	312.5	199.7	238.2	224.0	223.5	234.3	0.385	-0.248	0.000	-0.087	-0.090	-0.023	312.5	199.7	238.2	224.0	223.5	234.3	1.00	1.00	1.00	1.00	1.00	1.00	0.589490	1.000000	-
Rv3217c	-	3	218.5	238.0	269.9	257.1	225.5	217.2	-0.299	-0.178	0.000	-0.069	-0.254	-0.307	218.5	238.0	269.9	257.1	225.5	217.2	1.00	1.00	1.00	1.00	1.00	1.00	0.709650	1.000000	-
Rv3218	-	17	98.3	126.4	113.2	121.2	124.5	101.3	-0.195	0.152	0.000	0.094	0.131	-0.154	131.9	153.5	137.5	131.5	132.3	123.0	0.75	0.82	0.82	0.92	0.94	0.82	0.531146	1.000000	-
Rv3219	whiB1	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3220c	-	18	256.9	151.2	238.8	125.4	137.4	197.7	0.103	-0.642	0.000	-0.903	-0.776	-0.267	256.9	160.1	238.8	127.7	137.4	197.7	1.00	0.94	1.00	0.98	1.00	1.00	0.000013	0.000411	-
Rv3221c	TB7.3	2	0.0	0.0	3.1	0.0	0.0	0.0	-0.705	-0.705	0.000	-0.705	-0.705	-0.705	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.25	0.00	0.00	0.00	0.481441	1.000000	-
Rv3221A	-	2	0.0	7.6	3.1	2.2	2.3	7.4	-0.705	0.626	0.000	-0.185	-0.169	0.606	0.0	15.1	12.6	13.0	9.0	14.8	0.00	0.50	0.25	0.17	0.25	0.50	0.732595	1.000000	-
Rv3222c	-	7	0.0	0.0	0.0	0.7	0.0	0.0	0.000	0.000	0.000	0.185	0.000	0.000	0.0	0.0	0.0	14.4	0.0	0.0	0.00	0.00	0.00	0.05	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3223c	sigH	14	113.8	163.2	108.6	143.0	172.1	169.5	0.065	0.567	0.000	0.383	0.641	0.620	119.4	163.2	112.6	146.5	172.1	169.5	0.95	1.00	0.96	0.98	1.00	1.00	0.068155	0.587338	-
Rv3224	-	15	201.6	169.1	195.8	193.5	182.0	171.5	0.041	-0.206	0.000	-0.016	-0.103	-0.186	226.8	181.1	209.7	207.3	194.9	183.7	0.89	0.93	0.93	0.93	0.93	0.93	0.999815	1.000000	-
Rv3224A	-	3	17.3	20.5	11.5	13.9	21.1	17.1	0.439	0.633	0.000	0.200	0.662	0.425	31.2	24.6	22.9	31.3	21.1	20.5	0.56	0.83	0.50	0.44	1.00	0.83	0.313457	1.000000	-
Rv3224B	-	3	156.8	130.7	143.5	186.0	163.2	166.1	0.124	-0.131	0.000	0.363	0.179	0.204	156.8	130.7	143.5	186.0	163.2	166.1	1.00	1.00	1.00	1.00	1.00	1.00	0.848996	1.000000	-
Rv3225c	-	23	254.0	246.0	243.9	242.7	236.8	257.0	0.058	0.013	0.000	-0.007	-0.042	0.074	265.6	246.0	254.9	261.6	247.5	257.0	0.96	1.00	0.96	0.93	0.96	1.00	0.570064	1.000000	-
Rv3226c	-	6	277.2	223.7	260.7	216.3	205.3	243.1	0.087	-0.216	0.000	-0.263	-0.337	-0.098	277.2	223.7	260.7	216.3	205.3	243.1	1.00	1.00	1.00	1.00	1.00	1.00	0.896230	1.000000	-
Rv3227	aroA	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3228	-	7	33.9	44.3	26.0	61.8	66.3	31.5	0.328	0.671	0.000	1.110	1.202	0.236	44.5	51.7	40.4	72.2	66.3	49.0	0.76	0.86	0.64	0.86	1.00	0.64	0.085355	0.682500	-
Rv3229c	-	21	62.8	87.4	44.5	42.7	45.2	59.7	0.454	0.901	0.000	-0.054	0.020	0.387	68.2	89.5	62.3	47.2	49.9	59.7	0.92	0.98	0.71	0.90	0.90	1.00	0.000003	0.000103	-
Rv3230c	-	14	53.8	91.0	51.7	36.5	51.1	49.9	0.052	0.759	0.000	-0.451	-0.016	-0.047	66.4	91.0	68.9	47.9	59.6	53.7	0.81	1.00	0.75	0.76	0.86	0.93	0.006307	0.095328	-
Rv3231c	-	5	396.4	323.9	366.1	254.1	225.6	283.0	0.113	-0.174	0.000	-0.518	-0.686	-0.366	396.4	323.9	366.1	254.1	225.6	283.0	1.00	1.00	1.00	1.00	1.00	1.00	0.265934	1.000000	-
Rv3232c	pvdS	20	290.2	314.1	285.7	309.3	299.0	319.1	0.022	0.135	0.000	0.113	0.065	0.157	290.2	314.1	285.7	309.3	299.0	319.1	1.00	1.00	1.00	1.00	1.00	1.00	0.982590	1.000000	-
Rv3233c	-	12	217.0	177.8	193.8	175.7	177.7	211.8	0.160	-0.121	0.000	-0.138	-0.122	0.125	244.2	177.8	221.5	180.7	193.9	211.8	0.89	1.00	0.88	0.97	0.92	1.00	0.380682	1.000000	-
Rv3234c	-	16	187.8	210.7	200.5	214.9	193.3	201.8	-0.092	0.070	0.000	0.098	-0.052	0.009	225.4	240.8	213.9	224.2	206.1	201.8	0.83	0.88	0.94	0.96	0.94	1.00	0.394858	1.000000	-
Rv3235	-	6	107.5	101.5	114.0	112.9	117.0	102.7	-0.082	-0.160	0.000	-0.014	0.035	-0.144	129.0	121.8	136.8	135.5	127.6	123.3	0.83	0.83	0.83	0.83	0.92	0.83	0.999976	1.000000	-
Rv3236c	-	11	90.7	107.8	90.1	89.0	93.5	97.4	0.008	0.245	0.000	-0.018	0.050	0.106	110.8	112.9	116.7	101.3	98.0	112.8	0.82	0.95	0.77	0.88	0.95	0.86	0.878470	1.000000	-
Rv3237c	-	8	182.8	180.0	173.1	170.3	151.3	185.8	0.077	0.055	0.000	-0.023	-0.189	0.099	208.9	205.8	197.8	194.6	161.4	198.2	0.88	0.88	0.88	0.88	0.94	0.94	0.999380	1.000000	-
Rv3238c	-	18	151.1	171.4	146.6	147.0	151.2	169.6	0.042	0.218	0.000	0.004	0.043	0.203	151.1	171.4	146.6	147.0	151.2	169.6	1.00	1.00	1.00	1.00	1.00	1.00	0.932343	1.000000	-
Rv3239c	-	52	255.6	238.0	238.6	233.9	225.8	232.6	0.097	-0.003	0.000	-0.028	-0.077	-0.035	280.8	257.8	275.7	260.6	244.6	244.4	0.91	0.92	0.87	0.90	0.92	0.95	0.952343	1.000000	-
Rv3240c	secA1	44	12.7	10.7	10.3	14.3	15.6	11.5	0.210	0.035	0.000	0.338	0.428	0.110	279.1	187.8	226.5	315.4	195.9	168.8	0.05	0.06	0.05	0.05	0.08	0.07	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3241c	-	10	211.5	235.5	193.4	241.9	245.8	239.4	0.126	0.278	0.000	0.316	0.338	0.301	211.5	235.5	193.4	241.9	245.8	239.4	1.00	1.00	1.00	1.00	1.00	1.00	0.771847	1.000000	-
Rv3242c	-	4	227.5	258.2	192.3	232.4	248.9	195.6	0.237	0.416	0.000	0.267	0.364	0.024	227.5	258.2	219.7	232.4	248.9	195.6	1.00	1.00	0.88	1.00	1.00	1.00	0.928082	1.000000	-
Rv3243c	-	4	175.1	118.3	137.8	142.1	142.0	199.4	0.335	-0.212	0.000	0.043	0.042	0.518	210.1	135.2	137.8	142.1	162.3	265.8	0.83	0.88	1.00	1.00	0.88	0.75	0.284463	1.000000	-
Rv3244c	lpqB	18	0.4	0.3	0.0	0.0	0.0	0.6	0.119	0.081	0.000	0.000	0.000	0.164	11.6	10.4	0.0	0.0	0.0	10.8	0.04	0.03	0.00	0.00	0.00	0.06	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3245c	mtrB	19	0.2	1.1	0.3	0.0	1.6	0.0	-0.035	0.185	0.000	-0.093	0.311	-0.093	11.6	13.4	12.6	0.0	15.4	0.0	0.02	0.08	0.03	0.00	0.11	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3246c	mtrA	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3247c	tmk	9	13.2	5.6	7.3	15.1	11.4	5.6	0.572	-0.205	0.000	0.711	0.422	-0.207	119.1	50.7	65.4	135.7	68.6	50.7	0.11	0.11	0.11	0.11	0.17	0.11	0.459774	1.000000	-
Rv3248c	sahH	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3249c	-	12	85.5	137.4	89.7	133.1	144.2	96.7	-0.065	0.589	0.000	0.545	0.657	0.104	109.9	143.3	107.6	136.9	157.3	96.7	0.78	0.96	0.83	0.97	0.92	1.00	0.069410	0.595580	-
Rv3250c	rubB	3	191.7	219.2	214.7	207.8	177.5	189.2	-0.159	0.029	0.000	-0.046	-0.267	-0.177	191.7	219.2	214.7	207.8	177.5	189.2	1.00	1.00	1.00	1.00	1.00	1.00	0.991667	1.000000	-
Rv3251c	rubA	3	146.1	195.0	143.7	124.9	156.1	197.4	0.023	0.427	0.000	-0.196	0.115	0.444	146.1	195.0	143.7	124.9	156.1	197.4	1.00	1.00	1.00	1.00	1.00	1.00	0.860892	1.000000	-
Rv3252c	alkB	28	295.7	292.6	307.0	290.3	292.1	311.6	-0.053	-0.068	0.000	-0.079	-0.071	0.021	299.2	292.6	312.6	290.3	292.1	311.6	0.99	1.00	0.98	1.00	1.00	1.00	0.896931	1.000000	-
Rv3253c	-	22	132.8	116.8	125.9	102.0	108.4	133.7	0.074	-0.104	0.000	-0.291	-0.207	0.083	156.5	131.8	158.3	124.7	132.5	143.5	0.85	0.89	0.80	0.82	0.82	0.93	0.827691	1.000000	-
Rv3254	-	17	183.2	170.7	160.8	164.2	178.1	175.5	0.183	0.084	0.000	0.029	0.143	0.122	207.7	223.3	210.3	194.8	201.8	205.8	0.88	0.76	0.76	0.84	0.88	0.85	0.913290	1.000000	-
Rv3255c	manA	17	0.0	0.3	0.4	0.0	0.0	0.3	-0.103	-0.017	0.000	-0.103	-0.103	-0.014	0.0	10.4	12.6	0.0	0.0	10.8	0.00	0.03	0.03	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3256c	-	7	63.8	103.1	72.8	108.8	91.9	83.1	-0.178	0.474	0.000	0.549	0.316	0.179	83.8	103.1	92.7	108.8	99.0	89.5	0.76	1.00	0.79	1.00	0.93	0.93	0.205096	1.000000	-
Rv3257c	manB	20	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3258c	-	4	8.5	6.2	6.3	4.5	12.2	9.0	0.255	-0.011	0.000	-0.256	0.602	0.302	34.0	49.8	50.5	26.9	48.7	35.8	0.25	0.12	0.12	0.17	0.25	0.25	0.628944	1.000000	-
Rv3259	-	2	285.3	317.3	418.6	293.3	292.0	293.3	-0.545	-0.394	0.000	-0.506	-0.513	-0.506	285.3	317.3	418.6	293.3	292.0	293.3	1.00	1.00	1.00	1.00	1.00	1.00	0.187843	1.000000	-
Rv3260c	whiB2	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3261	fbiA	13	195.8	169.2	217.1	110.3	110.8	169.4	-0.146	-0.350	0.000	-0.946	-0.940	-0.349	200.9	231.6	268.8	130.3	120.0	200.1	0.97	0.73	0.81	0.85	0.92	0.85	0.019701	0.231884	-
Rv3262	fbiB	12	123.1	106.3	140.4	113.9	133.3	96.8	-0.182	-0.385	0.000	-0.290	-0.072	-0.515	123.1	106.3	140.4	113.9	133.3	96.8	1.00	1.00	1.00	1.00	1.00	1.00	0.420974	1.000000	-
Rv3263	-	25	177.9	169.4	167.0	153.3	148.2	173.8	0.089	0.020	0.000	-0.119	-0.167	0.056	188.0	184.1	177.7	166.7	157.6	188.9	0.95	0.92	0.94	0.92	0.94	0.92	0.982558	1.000000	-
Rv3264c	manB	14	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3265c	wbbL1	13	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3266c	rmlD	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3267	-	19	3.6	17.1	4.4	7.0	21.4	8.5	-0.138	1.229	0.000	0.343	1.485	0.519	18.5	25.0	21.1	20.9	33.9	20.2	0.19	0.68	0.21	0.33	0.63	0.42	0.000000	0.000014	-
Rv3268	-	13	301.3	306.8	349.0	311.9	257.8	276.4	-0.209	-0.183	0.000	-0.160	-0.430	-0.331	345.6	332.3	378.1	337.9	279.2	299.4	0.87	0.92	0.92	0.92	0.92	0.92	0.998483	1.000000	-
Rv3269	-	4	113.1	149.8	90.9	98.7	68.4	92.1	0.300	0.691	0.000	0.113	-0.385	0.018	123.3	199.7	103.9	131.6	78.2	92.1	0.92	0.75	0.88	0.75	0.88	1.00	0.610365	1.000000	-
Rv3270	ctpC	15	171.7	165.8	190.2	165.4	150.1	204.1	-0.144	-0.192	0.000	-0.196	-0.332	0.099	241.5	216.3	237.8	232.5	173.2	218.6	0.71	0.77	0.80	0.71	0.87	0.93	0.574799	1.000000	-
Rv3271c	-	6	77.5	107.1	61.3	78.6	74.4	101.9	0.316	0.758	0.000	0.335	0.262	0.690	99.6	116.8	91.9	101.0	81.2	122.3	0.78	0.92	0.67	0.78	0.92	0.83	0.904970	1.000000	-
Rv3272	-	18	84.8	77.5	80.5	82.0	80.0	71.6	0.071	-0.052	0.000	0.025	-0.008	-0.159	106.5	103.3	120.7	116.5	99.3	85.9	0.80	0.75	0.67	0.70	0.81	0.83	0.854256	1.000000	-
Rv3273	-	27	77.7	85.4	68.8	71.4	84.1	59.8	0.165	0.293	0.000	0.050	0.272	-0.187	96.8	94.1	95.2	83.8	100.9	75.1	0.80	0.91	0.72	0.85	0.83	0.80	0.519597	1.000000	-
Rv3274c	fadE25	16	95.7	51.7	122.2	43.8	43.8	54.9	-0.337	-1.166	0.000	-1.381	-1.383	-1.086	127.6	63.6	156.4	56.9	60.9	70.3	0.75	0.81	0.78	0.77	0.72	0.78	0.000000	0.000006	-
Rv3275c	purE	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3276c	purK	8	0.0	0.0	0.0	0.0	1.1	0.0	0.000	0.000	0.000	0.000	0.293	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.12	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3277	-	13	23.9	26.6	28.5	35.2	33.7	29.3	-0.216	-0.085	0.000	0.261	0.207	0.030	58.2	57.7	61.8	80.7	73.1	69.2	0.41	0.46	0.46	0.44	0.46	0.42	0.960723	1.000000	-
Rv3278c	-	7	79.3	60.6	62.6	66.7	66.3	94.4	0.319	-0.043	0.000	0.084	0.077	0.557	104.1	70.7	87.6	87.5	84.4	120.2	0.76	0.86	0.71	0.76	0.79	0.79	0.987680	1.000000	-
Rv3279c	birA	5	0.0	0.0	0.0	0.0	1.5	0.0	0.000	0.000	0.000	0.000	0.367	0.000	0.0	0.0	0.0	0.0	14.5	0.0	0.00	0.00	0.00	0.00	0.10	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3280	accD5	30	0.0	0.0	0.4	0.0	0.0	0.0	-0.116	-0.116	0.000	-0.116	-0.116	-0.116	0.0	0.0	25.2	0.0	0.0	0.0	0.00	0.00	0.02	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3281	-	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3282	maf	11	45.2	55.2	59.9	66.4	51.9	52.2	-0.370	-0.110	0.000	0.136	-0.190	-0.181	64.9	67.4	94.1	70.6	67.2	57.5	0.70	0.82	0.64	0.94	0.77	0.91	0.211220	1.000000	-
Rv3283	sseA	16	160.3	112.4	186.3	40.8	49.6	83.4	-0.211	-0.705	0.000	-2.062	-1.810	-1.114	174.8	116.0	198.8	56.0	51.2	92.0	0.92	0.97	0.94	0.73	0.97	0.91	0.000000	0.000000	-
Rv3284	-	5	80.9	75.1	92.5	98.3	98.0	55.2	-0.183	-0.282	0.000	0.084	0.080	-0.695	80.9	75.1	92.5	98.3	98.0	61.3	1.00	1.00	1.00	1.00	1.00	0.90	0.529800	1.000000	-
Rv3285	accA3	23	0.0	0.0	0.0	0.2	0.0	0.0	0.000	0.000	0.000	0.059	0.000	0.000	0.0	0.0	0.0	14.4	0.0	0.0	0.00	0.00	0.00	0.01	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3286c	sigF	9	201.0	196.8	177.9	194.8	203.7	186.5	0.171	0.142	0.000	0.127	0.190	0.066	201.0	208.4	177.9	194.8	215.7	186.5	1.00	0.94	1.00	1.00	0.94	1.00	0.727854	1.000000	-
Rv3287c	rsbW	2	276.2	202.9	162.6	163.3	212.0	280.4	0.747	0.311	0.000	0.007	0.373	0.768	276.2	202.9	162.6	163.3	212.0	280.4	1.00	1.00	1.00	1.00	1.00	1.00	0.638770	1.000000	-
Rv3288c	usfY	10	22.5	23.5	22.2	30.1	40.6	42.8	0.018	0.068	0.000	0.367	0.747	0.813	37.6	39.2	44.4	50.1	62.5	65.8	0.60	0.60	0.50	0.60	0.65	0.65	0.276619	1.000000	-
Rv3289c	-	6	198.3	243.2	195.7	250.7	248.9	231.8	0.019	0.307	0.000	0.350	0.340	0.239	198.3	243.2	213.4	265.5	248.9	231.8	1.00	1.00	0.92	0.94	1.00	1.00	0.876907	1.000000	-
Rv3290c	lat	22	286.3	281.1	301.6	308.4	319.4	280.0	-0.074	-0.100	0.000	0.032	0.081	-0.105	290.7	281.1	301.6	308.4	319.4	280.0	0.98	1.00	1.00	1.00	1.00	1.00	0.951552	1.000000	-
Rv3291c	-	6	189.2	198.5	151.8	235.8	176.7	211.4	0.309	0.376	0.000	0.619	0.213	0.465	189.2	198.5	151.8	235.8	176.7	211.4	1.00	1.00	1.00	1.00	1.00	1.00	0.457009	1.000000	-
Rv3292	-	18	222.3	231.0	195.8	237.9	229.2	206.4	0.179	0.233	0.000	0.274	0.221	0.074	222.3	231.0	201.4	237.9	229.2	206.4	1.00	1.00	0.97	1.00	1.00	1.00	0.896255	1.000000	-
Rv3293	pcd	13	157.6	190.3	150.1	193.2	159.1	196.7	0.068	0.333	0.000	0.354	0.082	0.380	204.8	215.1	185.8	251.1	188.0	196.7	0.77	0.88	0.81	0.77	0.85	1.00	0.249736	1.000000	-
Rv3294c	-	20	73.1	103.6	85.0	86.2	98.4	110.9	-0.206	0.271	0.000	0.018	0.200	0.365	91.3	115.1	109.7	99.4	106.4	116.8	0.80	0.90	0.78	0.87	0.93	0.95	0.434123	1.000000	-
Rv3295	-	11	430.1	320.8	358.6	327.9	307.3	331.2	0.259	-0.158	0.000	-0.127	-0.220	-0.113	473.1	320.8	375.7	360.7	307.3	364.3	0.91	1.00	0.95	0.91	1.00	0.91	0.549536	1.000000	-
Rv3296	lhr	53	252.1	241.7	252.2	230.1	228.0	217.3	-0.000	-0.060	0.000	-0.130	-0.142	-0.210	274.6	275.5	262.1	248.9	241.7	232.7	0.92	0.88	0.96	0.92	0.94	0.93	0.535199	1.000000	-
Rv3297	nei	9	114.5	141.6	159.9	161.1	153.9	158.0	-0.465	-0.170	0.000	0.010	-0.054	-0.017	123.7	159.3	179.9	167.3	173.1	177.8	0.93	0.89	0.89	0.96	0.89	0.89	0.815993	1.000000	-
Rv3298c	lpqC	10	155.1	157.0	160.8	150.8	151.3	172.4	-0.051	-0.033	0.000	-0.090	-0.086	0.098	178.9	184.8	214.4	188.5	178.0	191.6	0.87	0.85	0.75	0.80	0.85	0.90	0.994442	1.000000	-
Rv3299c	atsB	42	112.8	97.4	110.4	110.2	108.3	111.6	0.030	-0.171	0.000	-0.002	-0.026	0.016	130.4	116.9	136.3	127.4	116.6	126.7	0.87	0.83	0.81	0.87	0.93	0.88	0.855779	1.000000	-
Rv3300c	-	9	105.8	123.1	154.6	136.1	90.1	93.7	-0.526	-0.318	0.000	-0.178	-0.747	-0.693	114.3	184.6	214.1	153.2	101.4	120.5	0.93	0.67	0.72	0.89	0.89	0.78	0.038235	0.394209	-
Rv3301c	phoY1	6	153.5	143.0	109.1	96.5	102.4	148.8	0.474	0.376	0.000	-0.169	-0.087	0.431	162.5	171.6	109.1	115.8	111.7	178.6	0.94	0.83	1.00	0.83	0.92	0.83	0.235014	1.000000	-
Rv3302c	glpD2	28	0.1	0.0	0.0	0.0	0.0	0.0	0.039	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.01	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3303c	lpdA	18	41.4	40.7	39.6	34.8	36.2	32.7	0.057	0.037	0.000	-0.163	-0.114	-0.243	57.3	52.4	71.2	53.7	44.9	40.5	0.72	0.78	0.56	0.65	0.81	0.81	0.315170	1.000000	-
Rv3304	-	8	106.8	133.8	112.8	113.6	118.7	100.0	-0.075	0.237	0.000	0.010	0.071	-0.165	116.5	142.7	120.3	118.5	118.7	123.1	0.92	0.94	0.94	0.96	1.00	0.81	0.654271	1.000000	-
Rv3305c	amiA1	19	38.0	39.4	42.8	57.2	61.8	52.6	-0.155	-0.108	0.000	0.380	0.481	0.268	63.6	62.3	67.8	75.9	80.9	71.4	0.60	0.63	0.63	0.75	0.76	0.74	0.716305	1.000000	-
Rv3306c	amiB1	15	108.7	173.1	94.7	142.1	132.6	115.6	0.189	0.837	0.000	0.561	0.465	0.275	168.6	185.5	123.5	177.6	159.1	133.4	0.64	0.93	0.77	0.80	0.83	0.87	0.263982	1.000000	-
Rv3307	deoD	10	136.6	137.9	139.8	162.6	143.2	127.5	-0.032	-0.019	0.000	0.212	0.034	-0.127	146.3	153.2	139.8	180.7	159.1	134.3	0.93	0.90	1.00	0.90	0.90	0.95	0.569230	1.000000	-
Rv3308	pmmB	18	190.2	194.9	162.8	189.6	160.2	165.8	0.218	0.252	0.000	0.214	-0.022	0.025	209.6	233.8	202.1	227.6	186.1	213.2	0.91	0.83	0.81	0.83	0.86	0.78	0.796996	1.000000	-
Rv3309c	upp	8	253.4	235.8	263.6	233.6	260.6	201.7	-0.056	-0.158	0.000	-0.171	-0.016	-0.378	253.4	269.5	263.6	267.0	297.8	201.7	1.00	0.88	1.00	0.88	0.88	1.00	0.175366	1.000000	-
Rv3310	-	13	109.9	124.7	109.8	140.2	128.6	132.1	0.001	0.177	0.000	0.339	0.219	0.256	138.2	141.0	158.5	165.7	139.3	149.3	0.79	0.88	0.69	0.85	0.92	0.88	0.841391	1.000000	-
Rv3311	-	14	54.2	91.9	46.0	112.1	110.3	81.2	0.215	0.926	0.000	1.200	1.177	0.758	87.5	122.5	71.6	147.2	140.4	113.7	0.62	0.75	0.64	0.76	0.79	0.71	0.490347	1.000000	-
Rv3312c	-	17	342.5	329.0	343.4	318.6	324.2	350.2	-0.004	-0.061	0.000	-0.107	-0.082	0.028	379.7	349.6	343.4	324.9	344.5	350.2	0.90	0.94	1.00	0.98	0.94	1.00	0.407418	1.000000	-
Rv3312A	-	4	151.3	193.9	216.2	155.0	207.5	178.8	-0.501	-0.153	0.000	-0.467	-0.058	-0.267	151.3	193.9	216.2	155.0	207.5	178.8	1.00	1.00	1.00	1.00	1.00	1.00	0.727966	1.000000	-
Rv3313c	add	10	98.7	86.7	86.9	103.1	73.5	94.4	0.173	-0.004	0.000	0.234	-0.227	0.112	109.7	102.0	96.6	106.7	77.4	94.4	0.90	0.85	0.90	0.97	0.95	1.00	0.650368	1.000000	-
Rv3314c	deoA	10	105.5	103.5	110.3	85.8	101.8	108.7	-0.061	-0.088	0.000	-0.344	-0.111	-0.020	105.5	103.5	116.1	91.9	107.1	108.7	1.00	1.00	0.95	0.93	0.95	1.00	0.670708	1.000000	-
Rv3315c	cdd	5	61.2	47.0	66.3	56.0	46.2	40.4	-0.107	-0.456	0.000	-0.226	-0.477	-0.652	70.6	52.2	82.9	56.0	66.0	40.4	0.87	0.90	0.80	1.00	0.70	1.00	0.215672	1.000000	-
Rv3316	sdhC	5	57.4	85.9	68.1	49.8	87.0	85.4	-0.229	0.314	0.000	-0.417	0.331	0.305	57.4	85.9	68.1	49.8	87.0	85.4	1.00	1.00	1.00	1.00	1.00	1.00	0.068084	0.587338	-
Rv3317	sdhD	4	82.2	76.3	69.4	78.9	96.6	109.8	0.228	0.127	0.000	0.174	0.449	0.626	82.2	76.3	69.4	78.9	96.6	109.8	1.00	1.00	1.00	1.00	1.00	1.00	0.536494	1.000000	-
Rv3318	sdhA	27	132.7	108.1	117.2	116.8	109.7	110.2	0.172	-0.113	0.000	-0.005	-0.091	-0.085	147.2	112.2	129.2	121.3	118.5	121.5	0.90	0.96	0.91	0.96	0.93	0.91	0.833644	1.000000	-
Rv3319	sdhB	8	168.5	160.9	165.9	177.9	173.5	153.8	0.022	-0.043	0.000	0.098	0.063	-0.106	224.7	214.5	221.2	251.1	252.3	189.2	0.75	0.75	0.75	0.71	0.69	0.81	0.997444	1.000000	-
Rv3320c	-	5	83.2	92.0	80.6	83.7	83.2	73.0	0.043	0.180	0.000	0.051	0.042	-0.135	83.2	115.1	80.6	83.7	83.2	91.2	1.00	0.80	1.00	1.00	1.00	0.80	0.184646	1.000000	-
Rv3321c	-	3	488.0	415.1	484.2	417.8	374.0	451.0	0.011	-0.220	0.000	-0.210	-0.368	-0.101	731.9	415.1	581.0	626.7	561.1	676.5	0.67	1.00	0.83	0.67	0.67	0.67	0.874545	1.000000	-
Rv3322c	-	7	282.1	263.1	310.0	263.6	259.4	279.5	-0.133	-0.233	0.000	-0.230	-0.253	-0.147	282.1	306.9	310.0	307.5	302.6	326.1	1.00	0.86	1.00	0.86	0.86	0.86	0.427334	1.000000	-
Rv3323c	moaX	13	138.9	153.1	118.4	129.5	154.0	186.9	0.222	0.358	0.000	0.125	0.366	0.638	154.8	165.9	139.9	148.6	166.8	194.4	0.90	0.92	0.85	0.87	0.92	0.96	0.845313	1.000000	-
Rv3324c	moaC	10	236.8	230.8	185.0	230.0	235.4	217.7	0.348	0.311	0.000	0.307	0.340	0.229	236.8	230.8	217.7	230.0	235.4	217.7	1.00	1.00	0.85	1.00	1.00	1.00	0.512748	1.000000	-
Rv3325	-	4	191.9	224.4	204.6	246.7	230.1	168.8	-0.090	0.130	0.000	0.264	0.166	-0.270	191.9	224.4	204.6	246.7	230.1	168.8	1.00	1.00	1.00	1.00	1.00	1.00	0.827613	1.000000	-
Rv3326	-	21	287.3	279.2	323.6	302.1	293.2	306.5	-0.169	-0.209	0.000	-0.097	-0.140	-0.077	377.1	344.9	399.8	396.6	362.2	367.8	0.76	0.81	0.81	0.76	0.81	0.83	0.998710	1.000000	-
Rv3327	-	19	164.7	201.8	180.9	188.7	184.0	206.7	-0.132	0.153	0.000	0.059	0.024	0.187	177.1	207.3	196.5	199.2	184.0	218.2	0.93	0.97	0.92	0.95	1.00	0.95	0.606632	1.000000	-
Rv3328c	sigJ	12	130.7	141.5	136.4	157.1	127.9	139.9	-0.059	0.051	0.000	0.197	-0.090	0.036	142.6	161.7	148.8	171.3	127.9	139.9	0.92	0.88	0.92	0.92	1.00	1.00	0.512911	1.000000	-
Rv3329	-	20	176.1	187.2	185.6	200.3	178.5	175.5	-0.074	0.012	0.000	0.107	-0.055	-0.079	192.1	202.4	212.1	200.3	198.3	195.0	0.92	0.93	0.88	1.00	0.90	0.90	0.314402	1.000000	-
Rv3330	dacB1	16	122.9	130.4	140.9	142.3	169.5	167.1	-0.190	-0.108	0.000	0.014	0.258	0.239	125.6	139.1	150.3	151.8	169.5	167.1	0.98	0.94	0.94	0.94	1.00	1.00	0.256430	1.000000	-
Rv3331	sugI	22	188.6	167.1	171.1	129.7	141.5	153.5	0.136	-0.034	0.000	-0.387	-0.266	-0.153	239.4	193.5	198.2	164.6	163.8	168.8	0.79	0.86	0.86	0.79	0.86	0.91	0.636103	1.000000	-
Rv3332	nagA	5	225.5	164.2	175.8	156.9	157.6	176.9	0.350	-0.096	0.000	-0.160	-0.154	0.008	225.5	164.2	175.8	156.9	157.6	176.9	1.00	1.00	1.00	1.00	1.00	1.00	0.565285	1.000000	-
Rv3333c	-	10	91.0	81.5	72.2	86.9	102.9	99.0	0.314	0.164	0.000	0.252	0.483	0.430	113.8	95.9	90.3	100.3	114.4	110.1	0.80	0.85	0.80	0.87	0.90	0.90	0.971629	1.000000	-
Rv3334	-	8	182.3	170.0	179.8	176.5	204.9	195.3	0.020	-0.078	0.000	-0.026	0.184	0.117	182.3	170.0	179.8	176.5	204.9	195.3	1.00	1.00	1.00	1.00	1.00	1.00	0.981076	1.000000	-
Rv3335c	-	11	93.8	68.5	72.4	71.2	83.7	100.3	0.352	-0.075	0.000	-0.024	0.196	0.443	103.2	75.4	83.9	73.4	92.1	110.3	0.91	0.91	0.86	0.97	0.91	0.91	0.512477	1.000000	-
Rv3336c	trpS	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3337	-	9	67.8	68.6	50.0	83.1	76.7	78.2	0.405	0.419	0.000	0.680	0.571	0.597	114.5	137.1	128.6	160.3	138.1	93.9	0.59	0.50	0.39	0.52	0.56	0.83	0.476422	1.000000	-
Rv3338	-	4	70.9	62.5	50.7	54.8	84.5	42.5	0.445	0.276	0.000	0.101	0.684	-0.230	94.5	71.4	58.0	73.1	84.5	56.7	0.75	0.88	0.88	0.75	1.00	0.75	0.572054	1.000000	-
Rv3339c	icd1	23	82.4	108.5	75.3	95.0	95.4	108.1	0.123	0.500	0.000	0.317	0.323	0.494	118.5	134.9	108.2	117.1	125.4	134.4	0.70	0.80	0.70	0.81	0.76	0.80	0.902410	1.000000	-
Rv3340	metC	15	272.5	250.8	289.5	198.5	185.3	241.9	-0.086	-0.203	0.000	-0.533	-0.630	-0.254	272.5	250.8	289.5	198.5	185.3	241.9	1.00	1.00	1.00	1.00	1.00	1.00	0.225887	1.000000	-
Rv3341	metX	14	55.4	56.3	52.8	30.2	32.7	53.0	0.063	0.084	0.000	-0.715	-0.617	0.003	72.7	68.5	70.4	37.3	43.6	57.0	0.76	0.82	0.75	0.81	0.75	0.93	0.005500	0.086066	-
Rv3342	-	8	73.0	60.6	58.1	72.8	61.3	69.6	0.306	0.054	0.000	0.302	0.071	0.240	83.5	64.6	84.6	83.3	65.4	92.8	0.88	0.94	0.69	0.88	0.94	0.75	0.537442	1.000000	-
Rv3343c	PPE54	146	44.2	42.7	42.3	44.7	42.7	49.4	0.056	0.012	0.000	0.070	0.010	0.201	121.8	108.5	118.9	109.3	104.7	113.6	0.36	0.39	0.36	0.41	0.41	0.43	0.995185	1.000000	-
Rv3344c	PE_PGRS49	6	217.8	192.0	244.2	226.1	195.5	199.3	-0.161	-0.339	0.000	-0.109	-0.314	-0.286	245.0	230.4	266.4	271.3	195.5	199.3	0.89	0.83	0.92	0.83	1.00	1.00	0.754523	1.000000	-
Rv3345c	PE_PGRS50	45	252.8	230.1	227.4	200.3	201.9	204.6	0.150	0.017	0.000	-0.179	-0.167	-0.149	273.1	276.1	252.6	241.4	224.4	227.3	0.93	0.83	0.90	0.83	0.90	0.90	0.248946	1.000000	-
Rv3346c	-	3	295.0	276.1	279.5	319.8	330.4	336.6	0.077	-0.017	0.000	0.191	0.238	0.264	295.0	276.1	335.4	319.8	495.6	504.9	1.00	1.00	0.83	1.00	0.67	0.67	0.175927	1.000000	-
Rv3347c	PPE55	112	100.6	103.8	96.7	99.4	100.4	116.6	0.055	0.098	0.000	0.038	0.052	0.259	146.3	129.9	148.3	135.7	125.6	142.8	0.69	0.80	0.65	0.73	0.80	0.82	0.056545	0.513374	-
Rv3348	-	3	331.9	347.2	279.3	243.4	251.8	261.9	0.245	0.309	0.000	-0.195	-0.147	-0.091	331.9	347.2	279.3	243.4	251.8	261.9	1.00	1.00	1.00	1.00	1.00	1.00	0.916512	1.000000	-
Rv3349c	-	2	370.3	303.7	299.9	338.2	304.6	292.1	0.300	0.018	0.000	0.171	0.022	-0.038	370.3	303.7	299.9	338.2	304.6	292.1	1.00	1.00	1.00	1.00	1.00	1.00	0.969216	1.000000	-
Rv3350c	PPE56	121	121.6	123.7	120.2	127.2	119.4	128.3	0.016	0.040	0.000	0.078	-0.009	0.090	181.7	166.4	179.6	179.6	160.5	160.1	0.67	0.74	0.67	0.71	0.74	0.80	0.606511	1.000000	-
Rv3351c	-	15	311.8	328.4	305.7	342.8	307.4	291.0	0.028	0.102	0.000	0.163	0.008	-0.070	311.8	328.4	305.7	342.8	307.4	291.0	1.00	1.00	1.00	1.00	1.00	1.00	0.944441	1.000000	-
Rv3352c	-	2	314.8	319.0	307.6	359.0	285.6	283.7	0.033	0.051	0.000	0.220	-0.105	-0.115	314.8	319.0	307.6	359.0	285.6	283.7	1.00	1.00	1.00	1.00	1.00	1.00	0.998230	1.000000	-
Rv3353c	-	3	259.2	281.4	199.2	201.7	266.8	231.7	0.372	0.488	0.000	0.018	0.413	0.213	259.2	281.4	199.2	201.7	266.8	231.7	1.00	1.00	1.00	1.00	1.00	1.00	0.341726	1.000000	-
Rv3354	-	5	517.8	534.4	641.7	535.5	482.4	456.0	-0.307	-0.262	0.000	-0.259	-0.408	-0.488	554.8	534.4	713.0	535.5	482.4	456.0	0.93	1.00	0.90	1.00	1.00	1.00	0.934680	1.000000	-
Rv3355c	-	3	147.0	180.3	183.5	145.5	165.2	187.6	-0.311	-0.025	0.000	-0.325	-0.147	0.031	220.4	270.5	367.0	218.3	495.7	562.7	0.67	0.67	0.50	0.67	0.33	0.33	0.589350	1.000000	-
Rv3356c	folD	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3357	-	5	140.2	185.9	155.1	145.6	133.2	160.5	-0.141	0.254	0.000	-0.088	-0.212	0.048	140.2	185.9	155.1	145.6	133.2	160.5	1.00	1.00	1.00	1.00	1.00	1.00	0.905176	1.000000	-
Rv3358	-	2	139.3	142.2	114.4	102.8	102.5	93.9	0.273	0.302	0.000	-0.148	-0.152	-0.272	209.0	189.6	228.8	205.5	136.7	187.8	0.67	0.75	0.50	0.50	0.75	0.50	0.996818	1.000000	-
Rv3359	-	16	250.2	267.7	251.7	263.9	258.4	251.2	-0.008	0.087	0.000	0.067	0.037	-0.003	255.6	276.3	251.7	269.5	258.4	251.2	0.98	0.97	1.00	0.98	1.00	1.00	0.941664	1.000000	-
Rv3360	-	2	111.3	135.0	87.4	107.8	116.9	115.5	0.331	0.598	0.000	0.287	0.399	0.382	111.3	135.0	87.4	107.8	116.9	115.5	1.00	1.00	1.00	1.00	1.00	1.00	0.617136	1.000000	-
Rv3361c	-	5	62.7	51.8	58.7	64.1	90.6	73.7	0.087	-0.164	0.000	0.118	0.586	0.305	94.0	86.4	97.8	106.9	129.4	73.7	0.67	0.60	0.60	0.60	0.70	1.00	0.475512	1.000000	-
Rv3362c	-	6	74.6	57.9	95.0	77.6	74.4	82.4	-0.329	-0.668	0.000	-0.275	-0.332	-0.194	134.3	99.3	162.8	199.6	127.6	141.2	0.56	0.58	0.58	0.39	0.58	0.58	0.969793	1.000000	-
Rv3363c	-	7	144.8	139.9	125.6	147.1	142.9	173.8	0.198	0.150	0.000	0.220	0.180	0.453	144.8	163.2	135.3	171.6	142.9	187.2	1.00	0.86	0.93	0.86	1.00	0.93	0.246645	1.000000	-
Rv3364c	-	4	120.6	195.8	111.7	156.3	157.2	142.0	0.106	0.783	0.000	0.467	0.475	0.334	131.6	195.8	148.9	156.3	209.6	142.0	0.92	1.00	0.75	1.00	0.75	1.00	0.310942	1.000000	-
Rv3365c	-	31	299.3	282.0	283.2	279.3	265.4	266.8	0.079	-0.006	0.000	-0.019	-0.092	-0.085	331.4	306.7	297.6	282.4	265.4	275.6	0.90	0.92	0.95	0.99	1.00	0.97	0.120481	0.823148	-
Rv3366	spoU	5	211.2	204.8	230.4	211.9	204.8	222.1	-0.123	-0.166	0.000	-0.118	-0.166	-0.052	264.1	204.8	230.4	211.9	256.0	277.6	0.80	1.00	1.00	1.00	0.80	0.80	0.227689	1.000000	-
Rv3367	PE_PGRS51	20	168.2	174.9	182.0	157.4	157.1	174.8	-0.111	-0.057	0.000	-0.204	-0.207	-0.057	183.5	218.6	196.8	178.2	179.5	184.0	0.92	0.80	0.93	0.88	0.88	0.95	0.616688	1.000000	-
Rv3368c	-	8	102.2	121.7	158.4	120.6	103.2	112.5	-0.608	-0.367	0.000	-0.379	-0.594	-0.476	111.5	121.7	169.0	120.6	103.2	112.5	0.92	1.00	0.94	1.00	1.00	1.00	0.614345	1.000000	-
Rv3369	-	6	68.6	76.4	87.1	79.7	92.5	97.3	-0.323	-0.177	0.000	-0.121	0.082	0.152	68.6	76.4	87.1	79.7	100.9	97.3	1.00	1.00	1.00	1.00	0.92	1.00	0.600772	1.000000	-
Rv3370c	dnaE2	33	157.8	153.3	164.3	152.8	144.1	141.2	-0.056	-0.097	0.000	-0.101	-0.183	-0.212	179.6	165.9	177.8	182.3	172.9	163.5	0.88	0.92	0.92	0.84	0.83	0.86	0.626401	1.000000	-
Rv3371	-	23	108.3	81.5	100.1	87.8	92.1	113.7	0.108	-0.282	0.000	-0.180	-0.114	0.175	128.9	96.1	139.6	118.8	108.7	141.4	0.84	0.85	0.72	0.74	0.85	0.80	0.432061	1.000000	-
Rv3372	otsB2	9	1.2	13.0	2.4	6.0	8.7	5.0	-0.256	1.279	0.000	0.573	0.886	0.434	32.8	117.1	21.8	54.4	39.2	45.3	0.04	0.11	0.11	0.11	0.22	0.11	0.210973	1.000000	-
Rv3373	echA18	3	108.3	118.0	120.8	86.9	106.8	87.3	-0.151	-0.032	0.000	-0.453	-0.171	-0.446	108.3	118.0	120.8	86.9	106.8	87.3	1.00	1.00	1.00	1.00	1.00	1.00	0.673064	1.000000	-
Rv3374	echA18.1	2	236.2	334.5	248.6	239.6	248.1	287.8	-0.072	0.421	0.000	-0.052	-0.003	0.207	236.2	334.5	248.6	239.6	248.1	287.8	1.00	1.00	1.00	1.00	1.00	1.00	0.523336	1.000000	-
Rv3375	amiD	21	136.2	115.6	106.6	119.7	115.9	93.8	0.339	0.111	0.000	0.160	0.115	-0.176	171.7	142.8	140.0	153.9	135.2	112.6	0.79	0.81	0.76	0.78	0.86	0.83	0.931664	1.000000	-
Rv3376	-	8	180.1	197.5	200.8	192.4	168.0	178.3	-0.153	-0.023	0.000	-0.060	-0.251	-0.167	196.5	197.5	200.8	192.4	168.0	178.3	0.92	1.00	1.00	1.00	1.00	1.00	0.799089	1.000000	-
Rv3377c	-	50	43.0	41.2	42.9	33.5	38.4	33.7	0.005	-0.052	0.000	-0.314	-0.140	-0.304	82.7	61.4	79.4	61.2	59.1	53.6	0.52	0.67	0.54	0.55	0.65	0.63	0.263178	1.000000	-
Rv3378c	-	37	11.0	12.6	16.6	15.4	14.7	22.8	-0.430	-0.291	0.000	-0.084	-0.129	0.363	28.4	30.2	49.1	37.9	30.3	40.1	0.39	0.42	0.34	0.41	0.49	0.57	0.084898	0.680203	-
Rv3379c	dxs2	26	128.9	106.4	127.7	107.5	115.0	118.6	0.013	-0.252	0.000	-0.238	-0.145	-0.102	152.4	125.8	144.4	125.2	132.9	137.1	0.85	0.85	0.88	0.86	0.87	0.87	0.986641	1.000000	-
Rv3380c	-	21	289.2	298.1	319.8	306.7	278.7	284.4	-0.143	-0.100	0.000	-0.060	-0.195	-0.166	379.6	357.7	419.7	378.8	334.5	331.8	0.76	0.83	0.76	0.81	0.83	0.86	0.998408	1.000000	-
Rv3381c	-	4	220.8	247.5	245.0	240.0	237.8	172.8	-0.147	0.014	0.000	-0.029	-0.042	-0.492	220.8	247.5	245.0	240.0	237.8	172.8	1.00	1.00	1.00	1.00	1.00	1.00	0.905053	1.000000	-
Rv3382c	lytB1	10	195.4	189.9	187.9	181.6	184.2	200.5	0.055	0.015	0.000	-0.047	-0.028	0.091	244.2	199.9	197.8	181.6	204.6	222.7	0.80	0.95	0.95	1.00	0.90	0.90	0.250238	1.000000	-
Rv3383c	idsB	17	110.3	114.3	116.7	99.9	104.3	100.2	-0.078	-0.029	0.000	-0.214	-0.155	-0.211	134.0	134.0	158.7	124.3	114.4	121.6	0.82	0.85	0.74	0.80	0.91	0.82	0.937163	1.000000	-
Rv3384c	-	2	454.9	347.5	377.3	490.4	508.1	315.7	0.267	-0.117	0.000	0.374	0.425	-0.253	454.9	347.5	377.3	490.4	508.1	315.7	1.00	1.00	1.00	1.00	1.00	1.00	0.029422	0.319001	-
Rv3385c	-	3	197.4	188.7	225.2	176.2	168.8	205.1	-0.186	-0.249	0.000	-0.345	-0.406	-0.132	197.4	188.7	225.2	176.2	168.8	205.1	1.00	1.00	1.00	1.00	1.00	1.00	0.949110	1.000000	-
Rv3386	-	8	73.7	121.4	71.8	90.9	110.9	106.4	0.034	0.718	0.000	0.320	0.593	0.537	88.4	121.4	82.1	109.1	118.3	121.7	0.83	1.00	0.88	0.83	0.94	0.88	0.296937	1.000000	-
Rv3387	-	5	104.9	93.7	90.5	108.1	102.2	96.7	0.202	0.048	0.000	0.245	0.166	0.091	112.4	117.1	100.6	115.9	113.5	96.7	0.93	0.80	0.90	0.93	0.90	1.00	0.956698	1.000000	-
Rv3388	PE_PGRS52	19	186.5	187.3	186.2	179.4	170.5	179.4	0.003	0.008	0.000	-0.052	-0.124	-0.052	247.3	215.7	235.8	249.4	196.3	184.3	0.75	0.87	0.79	0.72	0.87	0.97	0.149055	0.942781	-
Rv3389c	-	7	230.5	248.9	221.0	236.8	257.0	244.8	0.059	0.168	0.000	0.097	0.213	0.144	230.5	248.9	221.0	236.8	257.0	244.8	1.00	1.00	1.00	1.00	1.00	1.00	0.996682	1.000000	-
Rv3390	lpqD	11	295.0	287.5	290.4	318.2	303.5	308.0	0.023	-0.014	0.000	0.130	0.063	0.084	295.0	287.5	319.4	318.2	303.5	308.0	1.00	1.00	0.91	1.00	1.00	1.00	0.673107	1.000000	-
Rv3391	acrA1	30	250.7	207.8	235.9	222.2	212.8	204.5	0.086	-0.179	0.000	-0.085	-0.145	-0.201	268.6	222.7	262.1	232.5	228.0	227.2	0.93	0.93	0.90	0.96	0.93	0.90	0.953793	1.000000	-
Rv3392c	cmaA1	12	99.3	71.8	109.6	75.4	80.8	84.6	-0.137	-0.579	0.000	-0.512	-0.419	-0.356	127.6	86.1	125.3	90.4	96.9	112.8	0.78	0.83	0.88	0.83	0.83	0.75	0.754015	1.000000	-
Rv3393	iunH	9	210.4	192.9	237.0	176.1	174.8	158.6	-0.168	-0.290	0.000	-0.419	-0.429	-0.565	247.0	217.0	266.7	190.2	185.1	167.9	0.85	0.89	0.89	0.93	0.94	0.94	0.985794	1.000000	-
Rv3394c	-	10	114.8	102.5	113.8	109.3	102.7	127.8	0.013	-0.143	0.000	-0.055	-0.141	0.161	114.8	107.9	113.8	121.5	114.2	142.0	1.00	0.95	1.00	0.90	0.90	0.90	0.286610	1.000000	-
Rv3395c	-	4	52.6	42.0	63.2	36.6	34.7	47.6	-0.245	-0.536	0.000	-0.713	-0.781	-0.376	70.1	56.0	63.2	48.8	46.3	63.4	0.75	0.75	1.00	0.75	0.75	0.75	0.823729	1.000000	-
Rv3395A	-	8	71.8	66.9	80.2	71.6	73.8	71.8	-0.148	-0.244	0.000	-0.153	-0.112	-0.148	71.8	66.9	91.6	71.6	73.8	71.8	1.00	1.00	0.88	1.00	1.00	1.00	0.588082	1.000000	-
Rv3396c	guaA	15	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3397c	phyA	17	109.6	101.2	115.0	89.1	81.0	97.2	-0.066	-0.176	0.000	-0.350	-0.480	-0.231	133.1	122.9	134.8	105.7	83.5	100.1	0.82	0.82	0.85	0.84	0.97	0.97	0.197501	1.000000	-
Rv3398c	idsA1	8	98.0	109.9	117.2	69.3	104.7	64.2	-0.247	-0.089	0.000	-0.718	-0.156	-0.820	123.8	135.3	144.2	92.4	119.6	79.0	0.79	0.81	0.81	0.75	0.88	0.81	0.685292	1.000000	-
Rv3399	-	15	53.7	61.6	60.1	71.1	63.5	65.2	-0.148	0.034	0.000	0.226	0.075	0.108	63.6	71.1	75.1	71.1	82.9	67.4	0.84	0.87	0.80	1.00	0.77	0.97	0.018391	0.221019	-
Rv3400	-	11	147.6	169.3	165.4	162.9	181.5	167.4	-0.160	0.033	0.000	-0.022	0.130	0.017	167.9	186.3	191.5	179.2	199.6	167.4	0.88	0.91	0.86	0.91	0.91	1.00	0.888595	1.000000	-
Rv3401	-	33	285.3	276.1	265.0	257.2	263.2	239.0	0.105	0.059	0.000	-0.042	-0.009	-0.146	321.0	289.3	296.4	265.3	280.2	254.4	0.89	0.95	0.89	0.97	0.94	0.94	0.739304	1.000000	-
Rv3402c	-	25	245.3	250.8	253.5	237.9	254.3	242.0	-0.047	-0.016	0.000	-0.090	0.004	-0.066	252.0	250.8	253.5	247.8	254.3	252.1	0.97	1.00	1.00	0.96	1.00	0.96	0.537605	1.000000	-
Rv3403c	-	21	389.3	381.8	391.7	384.1	390.0	349.9	-0.009	-0.037	0.000	-0.028	-0.006	-0.161	408.8	400.9	421.9	403.3	390.0	367.4	0.95	0.95	0.93	0.95	1.00	0.95	0.941905	1.000000	-
Rv3404c	-	9	193.2	189.9	174.7	190.0	178.9	204.1	0.141	0.117	0.000	0.118	0.033	0.219	193.2	189.9	174.7	190.0	178.9	204.1	1.00	1.00	1.00	1.00	1.00	1.00	0.995481	1.000000	-
Rv3405c	-	7	281.6	270.9	309.7	251.9	299.7	267.3	-0.135	-0.190	0.000	-0.293	-0.047	-0.209	281.6	270.9	309.7	293.9	299.7	267.3	1.00	1.00	1.00	0.86	1.00	1.00	0.643231	1.000000	-
Rv3406	-	14	273.9	248.9	252.0	248.5	242.4	223.1	0.118	-0.017	0.000	-0.020	-0.055	-0.172	280.6	258.1	271.4	254.5	242.4	223.1	0.98	0.96	0.93	0.98	1.00	1.00	0.932978	1.000000	-
Rv3407	-	2	190.6	232.0	193.8	197.1	255.5	263.1	-0.024	0.254	0.000	0.023	0.389	0.431	190.6	232.0	193.8	197.1	255.5	263.1	1.00	1.00	1.00	1.00	1.00	1.00	0.891531	1.000000	-
Rv3408	-	7	281.9	257.8	290.7	268.5	273.1	288.6	-0.044	-0.170	0.000	-0.113	-0.089	-0.011	328.9	300.8	290.7	268.5	318.6	310.8	0.86	0.86	1.00	1.00	0.86	0.93	0.529033	1.000000	-
Rv3409c	choD	19	273.8	226.6	293.6	195.0	224.7	189.8	-0.099	-0.366	0.000	-0.579	-0.378	-0.616	306.0	232.8	301.5	205.8	244.0	195.0	0.89	0.97	0.97	0.95	0.92	0.97	0.419820	1.000000	-
Rv3410c	guaB3	12	169.9	133.6	147.8	39.4	58.5	115.2	0.194	-0.141	0.000	-1.782	-1.268	-0.346	185.3	145.7	161.3	52.6	70.2	125.7	0.92	0.92	0.92	0.75	0.83	0.92	0.000385	0.008539	-
Rv3411c	guaB2	11	0.5	0.0	0.0	0.0	0.0	0.0	0.137	0.000	0.000	0.000	0.000	0.000	16.4	0.0	0.0	0.0	0.0	0.0	0.03	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3412	-	9	74.3	94.4	90.9	137.4	114.9	94.9	-0.274	0.052	0.000	0.571	0.323	0.060	80.2	99.9	102.2	137.4	114.9	94.9	0.93	0.94	0.89	1.00	1.00	1.00	0.187067	1.000000	-
Rv3413c	-	4	281.6	181.1	205.3	225.8	225.5	188.7	0.447	-0.176	0.000	0.134	0.133	-0.118	281.6	181.1	205.3	225.8	225.5	188.7	1.00	1.00	1.00	1.00	1.00	1.00	0.947321	1.000000	-
Rv3414c	sigD	7	220.2	233.1	189.5	185.9	181.3	229.7	0.212	0.292	0.000	-0.027	-0.062	0.271	256.9	272.0	204.0	216.9	195.2	247.3	0.86	0.86	0.93	0.86	0.93	0.93	0.898161	1.000000	-
Rv3415c	-	9	438.4	391.9	380.9	372.9	387.3	380.5	0.200	0.041	0.000	-0.030	0.024	-0.001	514.6	503.9	428.5	479.5	497.9	489.2	0.85	0.78	0.89	0.78	0.78	0.78	0.966451	1.000000	-
Rv3416	whiB3	4	256.2	273.3	255.6	298.2	333.6	251.2	0.003	0.095	0.000	0.218	0.378	-0.025	256.2	273.3	255.6	298.2	333.6	251.2	1.00	1.00	1.00	1.00	1.00	1.00	0.878373	1.000000	-
Rv3417c	groEL	14	86.3	102.4	57.4	64.7	77.4	87.4	0.548	0.783	0.000	0.160	0.401	0.567	134.2	119.4	76.6	90.6	86.7	106.4	0.64	0.86	0.75	0.71	0.89	0.82	0.288230	1.000000	-
Rv3418c	groES	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3419c	gcp	12	59.0	62.2	50.3	58.4	39.0	53.4	0.212	0.281	0.000	0.197	-0.331	0.078	68.6	67.8	60.3	67.8	44.5	53.4	0.86	0.92	0.83	0.86	0.88	1.00	0.340461	1.000000	-
Rv3420c	rimI	10	89.3	134.4	73.5	134.4	125.2	117.9	0.265	0.829	0.000	0.830	0.731	0.648	89.3	134.4	91.8	134.4	125.2	117.9	1.00	1.00	0.80	1.00	1.00	1.00	0.001490	0.028441	-
Rv3421c	-	11	50.5	59.7	34.8	61.6	33.3	49.7	0.480	0.703	0.000	0.743	-0.055	0.460	59.5	62.6	45.0	67.7	38.6	54.7	0.85	0.95	0.77	0.91	0.86	0.91	0.115245	0.799142	-
Rv3422c	-	5	35.9	32.6	43.7	49.0	13.2	21.1	-0.250	-0.372	0.000	0.149	-1.422	-0.903	49.0	40.8	62.4	49.0	18.8	35.1	0.73	0.80	0.70	1.00	0.70	0.60	0.010549	0.143877	-
Rv3423c	alr	18	0.4	0.0	0.0	0.0	0.0	0.0	0.116	0.000	0.000	0.000	0.000	0.000	22.6	0.0	0.0	0.0	0.0	0.0	0.02	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3424c	-	8	105.0	117.8	113.3	127.5	124.3	106.7	-0.105	0.054	0.000	0.164	0.129	-0.082	114.5	125.6	120.8	133.0	124.3	113.8	0.92	0.94	0.94	0.96	1.00	0.94	0.978652	1.000000	-
Rv3425	PPE57	18	75.1	75.6	67.6	77.0	88.0	91.0	0.143	0.151	0.000	0.175	0.358	0.403	92.2	97.2	86.9	92.3	121.8	109.2	0.81	0.78	0.78	0.83	0.72	0.83	0.587878	1.000000	-
Rv3426	PPE58	21	13.0	24.7	24.3	29.1	23.6	24.1	-0.702	0.021	0.000	0.219	-0.032	-0.009	39.0	54.6	48.5	55.5	41.4	46.0	0.33	0.45	0.50	0.52	0.57	0.52	0.423267	1.000000	-
Rv3427c	-	7	103.3	98.9	76.1	96.4	89.3	102.1	0.416	0.357	0.000	0.322	0.217	0.401	103.3	98.9	88.8	96.4	89.3	102.1	1.00	1.00	0.86	1.00	1.00	1.00	0.779568	1.000000	-
Rv3428c	-	15	81.3	82.5	102.9	82.3	96.5	69.4	-0.323	-0.303	0.000	-0.306	-0.089	-0.537	98.8	88.4	123.5	94.9	107.2	83.2	0.82	0.93	0.83	0.87	0.90	0.83	0.900904	1.000000	-
Rv3429	PPE59	25	8.9	7.0	8.0	11.0	7.6	8.5	0.096	-0.122	0.000	0.300	-0.051	0.057	37.1	26.7	33.4	37.5	23.6	20.3	0.24	0.26	0.24	0.29	0.32	0.42	0.353317	1.000000	-
Rv3430c	-	20	266.3	236.4	242.8	249.8	237.9	207.6	0.131	-0.038	0.000	0.040	-0.029	-0.222	280.3	242.5	262.5	263.0	250.4	207.6	0.95	0.97	0.93	0.95	0.95	1.00	0.897139	1.000000	-
Rv3431c	-	9	203.2	165.5	175.0	189.3	186.5	195.7	0.210	-0.078	0.000	0.111	0.089	0.157	238.5	229.2	262.5	243.4	197.4	251.6	0.85	0.72	0.67	0.78	0.94	0.78	0.768635	1.000000	-
Rv3432c	gadB	21	190.6	184.4	187.2	183.8	204.3	185.3	0.026	-0.021	0.000	-0.026	0.123	-0.014	193.7	193.7	191.7	192.9	209.3	194.5	0.98	0.95	0.98	0.95	0.98	0.95	0.950636	1.000000	-
Rv3433c	-	7	283.1	286.0	253.6	273.0	231.2	250.8	0.156	0.170	0.000	0.104	-0.131	-0.016	313.0	308.0	273.1	286.7	323.7	292.6	0.90	0.93	0.93	0.95	0.71	0.86	0.798557	1.000000	-
Rv3434c	-	11	191.7	177.3	187.2	158.1	166.6	244.6	0.033	-0.076	0.000	-0.237	-0.164	0.377	218.1	185.7	228.8	163.0	183.3	244.6	0.88	0.95	0.82	0.97	0.91	1.00	0.412196	1.000000	-
Rv3435c	-	12	151.3	130.3	125.0	144.2	165.3	176.9	0.266	0.058	0.000	0.199	0.389	0.485	227.0	164.6	187.5	162.3	180.3	223.4	0.67	0.79	0.67	0.89	0.92	0.79	0.432030	1.000000	-
Rv3436c	glmS	25	0.0	0.0	0.9	0.0	0.0	0.0	-0.232	-0.232	0.000	-0.232	-0.232	-0.232	0.0	0.0	21.8	0.0	0.0	0.0	0.00	0.00	0.04	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3437	-	8	346.0	316.1	341.0	335.4	317.8	319.5	0.021	-0.108	0.000	-0.023	-0.100	-0.093	377.4	316.1	363.7	335.4	317.8	319.5	0.92	1.00	0.94	1.00	1.00	1.00	0.928070	1.000000	-
Rv3438	-	12	168.2	127.4	152.9	129.7	142.2	141.6	0.133	-0.255	0.000	-0.229	-0.102	-0.107	216.3	145.6	203.9	161.0	162.5	161.9	0.78	0.88	0.75	0.81	0.88	0.88	0.978706	1.000000	-
Rv3439c	-	10	297.6	319.9	316.8	317.2	359.7	304.7	-0.088	0.014	0.000	0.002	0.181	-0.055	297.6	319.9	333.4	317.2	359.7	304.7	1.00	1.00	0.95	1.00	1.00	1.00	0.890772	1.000000	-
Rv3440c	-	7	688.7	549.1	673.3	666.8	567.3	515.2	0.032	-0.292	0.000	-0.014	-0.245	-0.383	688.7	549.1	673.3	666.8	567.3	515.2	1.00	1.00	1.00	1.00	1.00	1.00	0.908490	1.000000	-
Rv3441c	mrsA	14	0.0	0.4	0.0	0.0	0.0	0.0	0.000	0.103	0.000	0.000	0.000	0.000	0.0	10.4	0.0	0.0	0.0	0.0	0.00	0.04	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3442c	rpsI	6	0.0	0.8	1.0	1.4	0.0	0.0	-0.275	-0.053	0.000	0.090	-0.275	-0.275	0.0	10.0	12.6	25.9	0.0	0.0	0.00	0.08	0.08	0.06	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3443c	rplM	6	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3444c	esxT	3	247.1	164.9	221.9	244.6	229.5	272.0	0.152	-0.417	0.000	0.137	0.047	0.288	247.1	164.9	221.9	244.6	229.5	272.0	1.00	1.00	1.00	1.00	1.00	1.00	0.796647	1.000000	-
Rv3445c	esxU	3	152.8	120.5	152.9	159.8	137.5	160.9	-0.001	-0.332	0.000	0.062	-0.149	0.071	171.9	120.5	152.9	159.8	137.5	160.9	0.89	1.00	1.00	1.00	1.00	1.00	0.973164	1.000000	-
Rv3446c	-	14	194.4	175.5	183.1	179.6	189.2	158.1	0.085	-0.059	0.000	-0.027	0.046	-0.206	209.4	182.0	183.1	179.6	189.2	170.2	0.93	0.96	1.00	1.00	1.00	0.93	0.413509	1.000000	-
Rv3447c	-	46	109.1	109.4	96.9	106.8	93.4	108.6	0.164	0.167	0.000	0.134	-0.050	0.157	150.6	134.2	129.2	140.4	119.3	124.8	0.72	0.82	0.75	0.76	0.78	0.87	0.770516	1.000000	-
Rv3448	-	22	88.7	70.5	94.1	86.2	66.1	86.5	-0.081	-0.392	0.000	-0.120	-0.478	-0.115	110.4	91.3	118.3	103.4	80.8	102.9	0.80	0.77	0.80	0.83	0.82	0.84	0.944828	1.000000	-
Rv3449	mycP4	17	176.9	173.0	189.4	163.6	173.9	147.9	-0.096	-0.127	0.000	-0.205	-0.120	-0.347	200.5	196.1	222.0	189.7	184.7	167.6	0.88	0.88	0.85	0.86	0.94	0.88	0.995459	1.000000	-
Rv3450c	-	12	373.5	341.1	345.1	346.2	333.9	290.0	0.113	-0.016	0.000	0.005	-0.047	-0.247	407.4	409.3	360.1	377.7	364.3	316.3	0.92	0.83	0.96	0.92	0.92	0.92	0.943531	1.000000	-
Rv3451	cut3	15	316.7	269.2	327.0	323.4	284.9	287.2	-0.046	-0.276	0.000	-0.016	-0.196	-0.185	339.3	278.5	327.0	330.7	284.9	287.2	0.93	0.97	1.00	0.98	1.00	1.00	0.749216	1.000000	-
Rv3452	cut4	7	377.6	372.8	410.1	409.0	320.4	400.7	-0.118	-0.136	0.000	-0.004	-0.351	-0.033	396.5	372.8	410.1	409.0	320.4	400.7	0.95	1.00	1.00	1.00	1.00	1.00	0.969754	1.000000	-
Rv3453	-	9	192.6	195.2	145.5	162.7	158.1	129.0	0.394	0.412	0.000	0.157	0.116	-0.167	192.6	195.2	154.0	175.7	177.8	129.0	1.00	1.00	0.94	0.93	0.89	1.00	0.341952	1.000000	-
Rv3454	-	24	10.3	11.2	14.0	13.5	16.6	13.7	-0.312	-0.223	0.000	-0.037	0.185	-0.017	30.8	23.5	37.2	26.2	36.1	27.5	0.33	0.48	0.38	0.51	0.46	0.50	0.265560	1.000000	-
Rv3455c	truA	12	37.9	37.6	35.7	35.8	18.8	32.3	0.076	0.067	0.000	0.004	-0.774	-0.125	54.6	50.2	53.5	49.6	34.7	43.1	0.69	0.75	0.67	0.72	0.54	0.75	0.749478	1.000000	-
Rv3456c	rplQ	6	0.0	0.8	0.0	0.0	0.0	0.0	0.000	0.222	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.08	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3457c	rpoA	11	0.4	0.0	0.0	0.0	0.7	0.0	0.098	0.000	0.000	0.000	0.179	0.000	11.6	0.0	0.0	0.0	14.5	0.0	0.03	0.00	0.00	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3458c	rpsD	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3459c	rpsK	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3460c	rpsM	8	2.8	3.1	0.0	3.5	6.5	5.1	0.640	0.704	0.000	0.767	1.207	1.010	22.3	16.8	0.0	21.1	26.2	27.0	0.12	0.19	0.00	0.17	0.25	0.19	0.541708	1.000000	-
Rv3461c	rpmJ	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3462c	infA	3	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3463	-	17	92.6	105.1	104.2	89.5	94.4	88.9	-0.163	0.011	0.000	-0.209	-0.136	-0.218	102.6	119.1	118.1	108.7	100.3	94.5	0.90	0.88	0.88	0.82	0.94	0.94	0.793247	1.000000	-
Rv3464	rmlB	20	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3465	rmlC	8	0.5	0.0	0.0	0.0	0.0	0.0	0.133	0.000	0.000	0.000	0.000	0.000	11.6	0.0	0.0	0.0	0.0	0.0	0.04	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3466	-	8	232.7	193.6	247.8	199.5	201.5	225.8	-0.089	-0.348	0.000	-0.306	-0.292	-0.131	242.8	221.3	264.3	227.9	230.3	258.0	0.96	0.88	0.94	0.88	0.88	0.88	0.975552	1.000000	-
Rv3467	-	14	195.2	193.2	217.2	195.9	186.7	202.3	-0.151	-0.165	0.000	-0.146	-0.213	-0.100	227.7	208.1	264.4	235.0	209.1	246.2	0.86	0.93	0.82	0.83	0.89	0.82	0.964101	1.000000	-
Rv3468c	-	16	132.0	118.1	135.1	117.3	108.4	131.1	-0.032	-0.186	0.000	-0.196	-0.305	-0.042	154.5	171.8	154.4	148.2	119.6	155.4	0.85	0.69	0.88	0.79	0.91	0.84	0.375093	1.000000	-
Rv3469c	mhpE	12	125.7	109.2	93.5	104.9	109.3	101.2	0.408	0.213	0.000	0.157	0.215	0.108	141.5	131.0	102.0	111.0	119.3	110.4	0.89	0.83	0.92	0.94	0.92	0.92	0.885980	1.000000	-
Rv3470c	ilvB2	16	118.4	90.3	114.5	95.0	103.4	126.6	0.046	-0.327	0.000	-0.257	-0.141	0.139	129.2	103.2	122.2	103.7	106.7	139.7	0.92	0.88	0.94	0.92	0.97	0.91	0.720172	1.000000	-
Rv3471c	-	6	131.1	134.4	135.4	123.0	143.0	131.6	-0.045	-0.010	0.000	-0.134	0.076	-0.040	157.3	134.4	147.7	147.6	143.0	131.6	0.83	1.00	0.92	0.83	1.00	1.00	0.635267	1.000000	-
Rv3472	-	11	169.9	148.8	181.5	195.0	184.8	181.9	-0.093	-0.278	0.000	0.101	0.025	0.003	175.2	148.8	181.5	214.5	184.8	181.9	0.97	1.00	1.00	0.91	1.00	1.00	0.397152	1.000000	-
Rv3473c	bpoA	8	161.5	189.1	156.5	143.1	162.7	184.9	0.045	0.266	0.000	-0.125	0.055	0.234	161.5	189.1	166.9	143.1	186.0	184.9	1.00	1.00	0.94	1.00	0.88	1.00	0.205806	1.000000	-
Rv3474	-	4	194.7	213.0	195.3	243.7	247.9	167.9	-0.004	0.123	0.000	0.313	0.337	-0.212	212.4	213.0	195.3	243.7	247.9	167.9	0.92	1.00	1.00	1.00	1.00	1.00	0.864434	1.000000	-
Rv3475	-	24	263.3	281.9	293.3	287.5	265.3	276.3	-0.153	-0.056	0.000	-0.028	-0.142	-0.085	344.7	330.0	380.5	350.8	296.2	308.4	0.76	0.85	0.77	0.82	0.90	0.90	0.896729	1.000000	-
Rv3476c	kgtP	35	89.2	88.6	96.3	89.8	83.2	96.6	-0.104	-0.115	0.000	-0.096	-0.199	0.005	97.6	92.5	107.0	98.2	89.6	104.1	0.91	0.96	0.90	0.91	0.93	0.93	0.970716	1.000000	-
Rv3477	PE31	5	63.6	74.6	37.5	39.6	28.0	58.3	0.690	0.905	0.000	0.068	-0.367	0.575	63.6	74.6	41.7	39.6	28.0	58.3	1.00	1.00	0.90	1.00	1.00	1.00	0.000718	0.014848	-
Rv3478	PPE60	14	42.5	32.8	31.9	18.1	16.6	29.4	0.365	0.037	0.000	-0.677	-0.769	-0.100	85.0	65.7	68.6	42.1	42.3	45.7	0.50	0.50	0.46	0.43	0.39	0.64	0.178824	1.000000	-
Rv3479	-	33	127.2	100.3	116.0	110.9	114.8	116.0	0.128	-0.200	0.000	-0.062	-0.014	-0.000	157.4	116.1	144.4	129.1	135.3	139.2	0.81	0.86	0.80	0.86	0.85	0.83	0.933683	1.000000	-
Rv3480c	-	28	91.2	112.5	113.2	116.6	122.5	109.7	-0.297	-0.009	0.000	0.040	0.109	-0.043	107.9	123.5	140.9	132.3	134.5	118.2	0.85	0.91	0.80	0.88	0.91	0.93	0.652640	1.000000	-
Rv3481c	-	8	131.6	126.0	118.0	141.5	118.2	125.2	0.152	0.091	0.000	0.252	0.003	0.082	131.6	134.4	125.9	141.5	126.1	125.2	1.00	0.94	0.94	1.00	0.94	1.00	0.853880	1.000000	-
Rv3482c	-	10	125.4	120.6	90.0	121.8	128.4	140.1	0.458	0.404	0.000	0.417	0.490	0.611	144.7	134.0	100.0	135.3	151.1	155.6	0.87	0.90	0.90	0.90	0.85	0.90	0.860293	1.000000	-
Rv3483c	-	9	496.9	432.8	452.3	467.8	450.1	450.4	0.134	-0.063	0.000	0.048	-0.007	-0.006	496.9	432.8	452.3	467.8	450.1	450.4	1.00	1.00	1.00	1.00	1.00	1.00	0.984725	1.000000	-
Rv3484	cpsA	27	172.6	177.0	162.4	186.1	190.6	176.4	0.085	0.121	0.000	0.192	0.225	0.116	183.9	183.8	178.9	218.5	201.9	190.5	0.94	0.96	0.91	0.85	0.94	0.93	0.427527	1.000000	-
Rv3485c	-	10	162.3	212.7	212.8	190.9	213.9	217.5	-0.381	-0.001	0.000	-0.153	0.007	0.031	167.9	236.3	236.5	197.5	225.1	217.5	0.97	0.90	0.90	0.97	0.95	1.00	0.681790	1.000000	-
Rv3486	-	6	123.6	119.9	87.9	122.0	120.6	116.2	0.468	0.427	0.000	0.451	0.435	0.384	130.8	119.9	105.5	129.2	120.6	116.2	0.94	1.00	0.83	0.94	1.00	1.00	0.845577	1.000000	-
Rv3487c	lipF	13	389.5	419.0	413.9	422.1	421.8	421.2	-0.087	0.017	0.000	0.028	0.027	0.025	389.5	419.0	413.9	433.2	421.8	421.2	1.00	1.00	1.00	0.97	1.00	1.00	0.931200	1.000000	-
Rv3488	-	4	208.6	154.2	223.4	144.0	141.6	116.2	-0.096	-0.520	0.000	-0.616	-0.639	-0.914	250.3	205.6	255.3	144.0	141.6	155.0	0.83	0.75	0.88	1.00	1.00	0.75	0.749238	1.000000	-
Rv3489	-	2	40.3	56.1	32.7	23.5	27.1	44.9	0.264	0.697	0.000	-0.401	-0.232	0.404	48.3	56.1	43.6	23.5	27.1	44.9	0.83	1.00	0.75	1.00	1.00	1.00	0.292693	1.000000	-
Rv3490	otsA	29	61.7	93.8	38.6	78.0	76.7	86.0	0.615	1.182	0.000	0.930	0.907	1.063	70.7	99.0	52.0	85.9	82.3	92.3	0.87	0.95	0.74	0.91	0.93	0.93	0.000005	0.000160	-
Rv3491	-	9	248.9	265.7	212.7	299.1	296.5	258.7	0.222	0.314	0.000	0.482	0.470	0.276	280.1	281.4	273.5	310.6	333.6	332.7	0.89	0.94	0.78	0.96	0.89	0.78	0.695285	1.000000	-
Rv3492c	-	9	116.3	115.9	96.9	195.5	203.0	114.6	0.252	0.247	0.000	0.977	1.030	0.232	130.8	122.7	109.0	195.5	203.0	114.6	0.89	0.94	0.89	1.00	1.00	1.00	0.031442	0.338146	-
Rv3493c	-	9	55.6	67.4	48.7	124.9	82.1	64.7	0.174	0.431	0.000	1.275	0.698	0.376	71.5	86.6	62.6	146.6	105.6	77.6	0.78	0.78	0.78	0.85	0.78	0.83	0.007219	0.106290	-
Rv3494c	mce4F	23	200.9	224.9	188.1	365.7	374.7	234.0	0.093	0.252	0.000	0.941	0.976	0.308	271.9	258.6	233.8	394.3	430.9	250.3	0.74	0.87	0.80	0.93	0.87	0.93	0.001509	0.028578	-
Rv3495c	lprN	10	70.1	109.2	75.2	175.4	207.0	113.8	-0.095	0.509	0.000	1.169	1.401	0.566	75.1	115.0	88.5	175.4	207.0	126.4	0.93	0.95	0.85	1.00	1.00	0.90	0.000092	0.002362	-
Rv3496c	mce4D	25	141.5	201.0	166.1	330.7	328.2	178.8	-0.224	0.268	0.000	0.973	0.962	0.104	158.4	233.8	197.7	393.7	341.9	207.9	0.89	0.86	0.84	0.84	0.96	0.86	0.000000	0.000000	-
Rv3497c	mce4C	13	91.1	121.3	94.0	216.1	233.4	130.5	-0.042	0.352	0.000	1.160	1.269	0.453	96.1	126.1	106.2	216.1	233.4	141.4	0.95	0.96	0.88	1.00	1.00	0.92	0.000005	0.000174	-
Rv3498c	mce4B	11	97.7	150.9	138.9	297.6	235.5	159.0	-0.486	0.116	0.000	1.072	0.741	0.189	129.0	184.4	179.7	297.6	259.0	194.3	0.76	0.82	0.77	1.00	0.91	0.82	0.035311	0.368825	-
Rv3499c	mce4A	31	105.8	176.7	128.4	248.6	246.5	141.2	-0.268	0.446	0.000	0.927	0.915	0.133	121.4	176.7	137.2	254.1	250.5	143.6	0.87	1.00	0.94	0.98	0.98	0.98	0.000000	0.000000	-
Rv3500c	yrbE4B	18	79.2	105.6	84.4	163.0	175.3	105.9	-0.087	0.307	0.000	0.910	1.012	0.311	104.3	126.7	104.8	172.5	185.6	112.1	0.76	0.83	0.81	0.94	0.94	0.94	0.011848	0.157060	-
Rv3501c	yrbE4A	7	91.1	107.0	87.9	207.7	196.8	100.7	0.049	0.269	0.000	1.195	1.119	0.186	91.1	107.0	102.6	207.7	196.8	100.7	1.00	1.00	0.86	1.00	1.00	1.00	0.021656	0.251911	-
Rv3502c	fabG	10	287.7	186.7	272.7	360.0	319.2	137.0	0.076	-0.534	0.000	0.394	0.223	-0.968	332.0	196.5	272.7	400.0	354.6	152.2	0.87	0.95	1.00	0.90	0.90	0.90	0.024058	0.271165	-
Rv3503c	fdxD	2	17.9	10.2	14.0	18.7	25.7	27.3	0.266	-0.326	0.000	0.316	0.688	0.762	21.5	20.4	18.7	37.4	25.7	27.3	0.83	0.50	0.75	0.50	1.00	1.00	0.137534	0.904053	-
Rv3504	fadE26	18	157.9	165.6	154.3	156.4	159.7	167.4	0.032	0.099	0.000	0.018	0.047	0.114	177.7	186.3	205.8	191.9	159.7	177.2	0.89	0.89	0.75	0.81	1.00	0.94	0.105741	0.762938	-
Rv3505	fadE27	12	123.9	103.4	140.9	103.1	121.4	125.0	-0.179	-0.429	0.000	-0.432	-0.207	-0.167	165.2	130.6	187.9	148.5	153.3	157.8	0.75	0.79	0.75	0.69	0.79	0.79	0.986902	1.000000	-
Rv3506	fadD17	23	172.5	159.3	178.7	139.6	139.7	158.9	-0.050	-0.161	0.000	-0.345	-0.344	-0.164	192.0	183.2	200.5	160.6	153.0	174.1	0.90	0.87	0.89	0.87	0.91	0.91	0.981048	1.000000	-
Rv3507	PE_PGRS53	37	164.2	160.5	169.8	147.6	149.9	125.1	-0.047	-0.079	0.000	-0.196	-0.175	-0.426	212.0	215.9	224.4	188.3	178.9	171.4	0.77	0.74	0.76	0.78	0.84	0.73	0.827170	1.000000	-
Rv3508	PE_PGRS54	28	102.4	88.4	123.1	104.9	117.9	102.8	-0.254	-0.456	0.000	-0.220	-0.060	-0.249	134.4	103.1	140.7	120.8	134.7	115.1	0.76	0.86	0.88	0.87	0.88	0.89	0.709489	1.000000	-
Rv3509c	ilvX	21	307.8	309.3	324.1	286.6	295.8	299.5	-0.073	-0.066	0.000	-0.175	-0.130	-0.112	352.6	316.9	324.1	291.2	295.8	314.5	0.87	0.98	1.00	0.98	1.00	0.95	0.111455	0.785054	-
Rv3510c	-	15	130.1	135.8	138.0	136.6	115.0	149.4	-0.082	-0.023	0.000	-0.014	-0.253	0.111	150.2	150.9	159.3	153.7	132.7	154.6	0.87	0.90	0.87	0.89	0.87	0.97	0.981547	1.000000	-
Rv3511	PE_PGRS55	23	374.5	322.0	387.1	348.9	306.2	308.7	-0.047	-0.262	0.000	-0.148	-0.333	-0.322	403.8	329.2	434.3	370.4	335.3	315.5	0.93	0.98	0.89	0.94	0.91	0.98	0.791028	1.000000	-
Rv3512	PE_PGRS56	26	171.2	139.7	160.0	153.7	143.0	132.2	0.095	-0.189	0.000	-0.056	-0.157	-0.266	196.3	191.1	184.8	173.7	177.0	167.6	0.87	0.73	0.87	0.88	0.81	0.79	0.368780	1.000000	-
Rv3513c	fadD18	13	369.5	330.7	312.0	349.8	354.9	362.2	0.240	0.083	0.000	0.162	0.183	0.212	369.5	330.7	324.5	349.8	354.9	362.2	1.00	1.00	0.96	1.00	1.00	1.00	0.978832	1.000000	-
Rv3514	PE_PGRS57	25	166.7	131.6	171.9	164.5	157.6	131.7	-0.043	-0.373	0.000	-0.062	-0.122	-0.372	235.8	173.1	226.2	212.7	167.7	156.8	0.71	0.76	0.76	0.77	0.94	0.84	0.209159	1.000000	-
Rv3515c	fadD19	27	126.7	125.7	124.3	133.9	133.6	138.8	0.026	0.015	0.000	0.103	0.101	0.154	153.2	138.5	142.8	148.5	147.3	149.9	0.83	0.91	0.87	0.90	0.91	0.93	0.978765	1.000000	-
Rv3516	echA19	7	52.9	77.7	87.2	62.3	68.2	63.7	-0.670	-0.157	0.000	-0.455	-0.333	-0.425	61.8	77.7	93.9	72.6	68.2	74.3	0.86	1.00	0.93	0.86	1.00	0.86	0.406830	1.000000	-
Rv3517	-	15	218.1	159.3	222.2	199.5	192.8	163.3	-0.026	-0.468	0.000	-0.152	-0.200	-0.433	306.7	191.1	317.5	320.6	214.2	188.4	0.71	0.83	0.70	0.62	0.90	0.87	0.156010	0.965386	-
Rv3518c	cyp142	12	82.5	65.5	85.5	86.2	72.2	84.3	-0.049	-0.362	0.000	0.011	-0.231	-0.019	135.0	104.7	120.8	129.3	108.2	126.5	0.61	0.62	0.71	0.67	0.67	0.67	0.999162	1.000000	-
Rv3519	-	10	186.5	180.7	204.3	205.9	208.6	218.7	-0.129	-0.173	0.000	0.011	0.029	0.096	186.5	190.2	215.1	205.9	208.6	243.0	1.00	0.95	0.95	1.00	1.00	0.90	0.307149	1.000000	-
Rv3520c	-	14	296.7	272.4	264.9	287.6	325.2	294.0	0.160	0.039	0.000	0.116	0.291	0.147	296.7	272.4	264.9	287.6	325.2	294.0	1.00	1.00	1.00	1.00	1.00	1.00	0.917537	1.000000	-
Rv3521	-	12	247.8	241.9	261.6	252.6	249.0	205.7	-0.077	-0.111	0.000	-0.050	-0.070	-0.339	297.3	290.3	285.4	284.2	249.0	214.7	0.83	0.83	0.92	0.89	1.00	0.96	0.412371	1.000000	-
Rv3522	ltp4	17	163.4	152.9	168.0	158.6	147.1	120.4	-0.039	-0.132	0.000	-0.081	-0.186	-0.465	208.3	157.5	219.7	172.1	178.6	132.0	0.78	0.97	0.76	0.92	0.82	0.91	0.153889	0.956622	-
Rv3523	ltp3	14	117.1	121.3	119.8	112.7	94.3	111.3	-0.032	0.017	0.000	-0.084	-0.330	-0.102	132.9	125.8	139.8	124.6	101.6	115.5	0.88	0.96	0.86	0.90	0.93	0.96	0.951190	1.000000	-
Rv3524	-	16	142.3	135.1	142.4	135.0	131.3	147.6	-0.000	-0.073	0.000	-0.074	-0.113	0.050	175.2	154.4	175.2	147.3	150.0	147.6	0.81	0.88	0.81	0.92	0.88	1.00	0.522832	1.000000	-
Rv3525c	-	8	208.6	173.3	188.8	222.1	229.6	249.9	0.140	-0.120	0.000	0.228	0.276	0.395	217.7	173.3	188.8	222.1	229.6	249.9	0.96	1.00	1.00	1.00	1.00	1.00	0.888897	1.000000	-
Rv3526	-	20	86.0	70.5	87.6	83.7	83.6	58.4	-0.025	-0.295	0.000	-0.062	-0.064	-0.547	103.2	78.3	103.1	91.3	92.9	64.9	0.83	0.90	0.85	0.92	0.90	0.90	0.697267	1.000000	-
Rv3527	-	6	75.6	97.6	105.2	100.8	93.3	86.4	-0.452	-0.103	0.000	-0.059	-0.166	-0.270	80.0	130.2	126.3	113.4	101.7	94.3	0.94	0.75	0.83	0.89	0.92	0.92	0.649405	1.000000	-
Rv3528c	-	33	4.8	8.0	10.1	9.5	9.9	7.0	-0.624	-0.220	0.000	-0.063	-0.027	-0.335	34.2	24.0	47.8	40.9	29.6	23.1	0.14	0.33	0.21	0.23	0.33	0.30	0.013564	0.176282	-
Rv3529c	-	25	58.9	44.0	54.2	49.4	53.8	49.6	0.110	-0.271	0.000	-0.120	-0.008	-0.116	73.6	50.0	66.1	59.8	62.6	51.7	0.80	0.88	0.82	0.83	0.86	0.96	0.283016	1.000000	-
Rv3530c	-	16	58.7	54.6	59.0	73.9	61.0	63.9	-0.007	-0.103	0.000	0.304	0.046	0.108	93.9	97.0	85.8	110.9	93.0	75.8	0.62	0.56	0.69	0.67	0.66	0.84	0.534985	1.000000	-
Rv3531c	-	22	129.0	158.7	139.2	140.7	134.9	150.9	-0.106	0.183	0.000	0.015	-0.044	0.112	135.1	174.6	145.8	147.4	138.0	154.4	0.95	0.91	0.95	0.95	0.98	0.98	0.590849	1.000000	-
Rv3532	PPE61	17	245.8	238.3	228.1	226.1	221.4	237.6	0.106	0.062	0.000	-0.013	-0.042	0.057	255.9	238.3	242.4	226.1	228.1	237.6	0.96	1.00	0.94	1.00	0.97	1.00	0.781482	1.000000	-
Rv3533c	PPE62	16	75.7	77.1	79.9	76.9	74.7	83.3	-0.073	-0.048	0.000	-0.052	-0.090	0.058	100.9	94.9	116.2	102.5	88.6	95.2	0.75	0.81	0.69	0.75	0.84	0.88	0.961882	1.000000	-
Rv3534c	-	7	190.6	204.6	202.6	187.7	211.5	190.0	-0.086	0.014	0.000	-0.107	0.060	-0.090	190.6	220.3	218.2	219.0	211.5	221.7	1.00	0.93	0.93	0.86	1.00	0.86	0.593425	1.000000	-
Rv3535c	-	10	226.6	282.9	244.1	223.4	303.7	247.6	-0.105	0.209	0.000	-0.126	0.309	0.020	251.8	314.3	244.1	248.2	319.7	275.1	0.90	0.90	1.00	0.90	0.95	0.90	0.397798	1.000000	-
Rv3536c	-	8	26.9	29.9	27.7	25.0	43.4	56.0	-0.032	0.095	0.000	-0.122	0.568	0.901	34.0	36.8	44.3	40.0	46.3	64.0	0.79	0.81	0.62	0.62	0.94	0.88	0.094966	0.720367	-
Rv3537	-	35	49.3	53.7	60.0	70.5	64.4	50.9	-0.259	-0.147	0.000	0.217	0.095	-0.217	80.9	91.7	100.0	100.1	88.4	72.7	0.61	0.59	0.60	0.70	0.73	0.70	0.573840	1.000000	-
Rv3538	-	12	35.8	33.5	34.4	42.8	38.3	32.6	0.051	-0.035	0.000	0.278	0.137	-0.067	61.4	50.2	55.0	59.2	51.1	43.5	0.58	0.67	0.62	0.72	0.75	0.75	0.976197	1.000000	-
Rv3539	PPE63	26	131.8	96.0	119.3	120.2	105.3	103.5	0.138	-0.300	0.000	0.010	-0.173	-0.197	149.0	108.5	137.9	128.4	114.1	119.6	0.88	0.88	0.87	0.94	0.92	0.87	0.712641	1.000000	-
Rv3540c	ltp2	15	55.5	12.5	61.5	15.3	23.8	13.0	-0.136	-1.926	0.000	-1.708	-1.208	-1.883	69.3	23.4	76.8	30.0	29.7	24.4	0.80	0.53	0.80	0.51	0.80	0.53	0.000000	0.000000	-
Rv3541c	-	7	22.7	4.3	34.3	10.1	9.8	4.3	-0.504	-2.079	0.000	-1.377	-1.409	-2.075	36.7	20.1	60.0	23.6	19.6	12.1	0.62	0.21	0.57	0.43	0.50	0.36	0.001201	0.023486	-
Rv3542c	-	11	86.0	15.2	77.3	24.4	35.9	16.8	0.144	-2.026	0.000	-1.484	-1.008	-1.920	94.6	22.3	89.5	26.9	41.6	21.7	0.91	0.68	0.86	0.91	0.86	0.77	0.000000	0.000000	-
Rv3543c	fadE29	15	29.1	5.7	32.7	13.8	10.3	1.4	-0.144	-1.812	0.000	-1.001	-1.295	-2.557	37.4	21.5	57.6	27.0	22.2	14.0	0.78	0.27	0.57	0.51	0.47	0.10	0.000000	0.000000	-
Rv3544c	fadE28	16	103.3	19.6	98.0	39.0	41.5	16.2	0.072	-2.065	0.000	-1.226	-1.148	-2.281	110.2	24.2	108.2	43.6	47.4	23.6	0.94	0.81	0.91	0.90	0.88	0.69	0.000000	0.000000	-
Rv3545c	cyp125	19	98.9	111.6	121.5	109.0	108.5	96.1	-0.284	-0.118	0.000	-0.151	-0.158	-0.324	120.0	136.8	149.0	121.8	124.9	110.6	0.82	0.82	0.82	0.89	0.87	0.87	0.955490	1.000000	-
Rv3546	fadA5	4	175.6	137.8	142.9	199.4	187.7	138.1	0.288	-0.051	0.000	0.467	0.381	-0.048	175.6	137.8	142.9	199.4	187.7	138.1	1.00	1.00	1.00	1.00	1.00	1.00	0.671679	1.000000	-
Rv3547	-	12	226.2	235.5	224.5	215.1	218.4	255.4	0.011	0.067	0.000	-0.060	-0.039	0.182	226.2	235.5	234.3	215.1	218.4	255.4	1.00	1.00	0.96	1.00	1.00	1.00	0.815605	1.000000	-
Rv3548c	-	7	266.4	255.0	251.2	250.3	219.8	233.7	0.083	0.021	0.000	-0.005	-0.189	-0.102	266.4	274.6	251.2	250.3	236.7	251.6	1.00	0.93	1.00	1.00	0.93	0.93	0.795566	1.000000	-
Rv3549c	-	10	127.2	86.6	127.1	70.9	83.0	52.7	0.001	-0.529	0.000	-0.799	-0.585	-1.196	131.6	86.6	141.2	78.8	87.4	58.5	0.97	1.00	0.90	0.90	0.95	0.90	0.180420	1.000000	-
Rv3550	echA20	5	69.9	35.7	74.6	53.0	59.7	30.8	-0.087	-0.965	0.000	-0.456	-0.298	-1.152	80.7	39.7	74.6	53.0	59.7	30.8	0.87	0.90	1.00	1.00	1.00	1.00	0.012697	0.166105	-
Rv3551	-	14	117.6	25.1	127.1	52.1	51.5	22.3	-0.107	-2.135	0.000	-1.211	-1.225	-2.275	120.5	28.1	127.1	60.7	65.6	34.7	0.98	0.89	1.00	0.86	0.79	0.64	0.000000	0.000000	-
Rv3552	-	9	9.5	4.5	12.2	8.8	6.5	6.2	-0.246	-0.849	0.000	-0.318	-0.576	-0.614	25.6	16.3	21.9	23.7	16.8	12.4	0.37	0.28	0.56	0.37	0.39	0.50	0.124924	0.842014	-
Rv3553	-	7	145.9	104.1	138.2	94.9	94.7	75.2	0.076	-0.392	0.000	-0.520	-0.522	-0.836	204.3	132.5	193.5	110.7	110.5	105.3	0.71	0.79	0.71	0.86	0.86	0.71	0.304706	1.000000	-
Rv3554	fdxB	25	139.2	135.2	141.6	138.7	127.1	122.0	-0.023	-0.065	0.000	-0.028	-0.150	-0.207	155.9	146.9	157.3	148.6	138.2	129.7	0.89	0.92	0.90	0.93	0.92	0.94	0.999471	1.000000	-
Rv3555c	-	12	140.9	101.9	131.9	124.1	118.7	82.4	0.091	-0.358	0.000	-0.085	-0.147	-0.648	158.5	128.7	166.7	159.5	142.4	109.9	0.89	0.79	0.79	0.78	0.83	0.75	0.822252	1.000000	-
Rv3556c	fadA6	12	85.5	71.5	99.4	77.6	83.0	74.7	-0.206	-0.448	0.000	-0.339	-0.246	-0.389	128.3	85.8	108.4	111.7	110.7	89.7	0.67	0.83	0.92	0.69	0.75	0.83	0.467522	1.000000	-
Rv3557c	-	15	159.8	179.0	170.6	153.7	162.8	135.7	-0.092	0.067	0.000	-0.146	-0.066	-0.320	199.8	191.8	213.3	168.7	180.9	145.3	0.80	0.93	0.80	0.91	0.90	0.93	0.751987	1.000000	-
Rv3558	PPE64	14	84.2	83.8	83.1	113.1	92.4	101.2	0.018	0.012	0.000	0.424	0.146	0.270	147.3	123.5	129.2	163.9	152.2	128.8	0.57	0.68	0.64	0.69	0.61	0.79	0.913572	1.000000	-
Rv3559c	-	6	88.8	27.1	79.2	64.2	50.2	42.2	0.155	-1.393	0.000	-0.283	-0.610	-0.836	99.9	46.4	86.4	77.1	50.2	50.6	0.89	0.58	0.92	0.83	1.00	0.83	0.095782	0.725178	-
Rv3560c	fadE30	13	140.7	96.5	121.2	132.1	125.9	106.5	0.208	-0.314	0.000	0.120	0.053	-0.178	156.8	104.6	121.2	139.2	125.9	106.5	0.90	0.92	1.00	0.95	1.00	1.00	0.183578	1.000000	-
Rv3561	fadD3	10	192.0	201.7	204.3	178.7	191.2	185.5	-0.088	-0.019	0.000	-0.188	-0.094	-0.136	192.0	201.7	204.3	178.7	201.2	185.5	1.00	1.00	1.00	1.00	0.95	1.00	0.892411	1.000000	-
Rv3562	fadE31	12	65.0	37.8	51.5	55.9	37.8	27.0	0.309	-0.401	0.000	0.108	-0.401	-0.822	83.6	47.7	103.0	77.4	64.8	40.5	0.78	0.79	0.50	0.72	0.58	0.67	0.031807	0.340240	-
Rv3563	fadE32	9	165.6	143.4	177.4	157.3	155.7	117.9	-0.097	-0.298	0.000	-0.168	-0.182	-0.569	165.6	161.3	177.4	157.3	155.7	124.8	1.00	0.89	1.00	1.00	1.00	0.94	0.396048	1.000000	-
Rv3564	fadE33	10	210.1	163.1	241.9	176.7	191.0	115.1	-0.199	-0.555	0.000	-0.442	-0.333	-1.040	233.4	181.2	268.8	220.9	212.3	143.9	0.90	0.90	0.90	0.80	0.90	0.80	0.739227	1.000000	-
Rv3565	aspB	16	26.0	42.0	36.9	26.5	32.6	23.6	-0.434	0.164	0.000	-0.414	-0.157	-0.553	46.3	79.0	56.3	52.9	61.4	34.3	0.56	0.53	0.66	0.50	0.53	0.69	0.059924	0.536089	-
Rv3566c	nat	12	100.4	68.8	76.4	87.5	93.0	95.7	0.372	-0.142	0.000	0.184	0.267	0.306	139.0	86.9	131.0	121.1	117.5	109.3	0.72	0.79	0.58	0.72	0.79	0.88	0.797082	1.000000	-
Rv3566A	-	3	45.9	40.6	45.9	69.2	28.6	35.1	0.002	-0.157	0.000	0.545	-0.601	-0.344	68.9	61.0	91.8	69.2	42.8	52.6	0.67	0.67	0.50	1.00	0.67	0.67	0.408090	1.000000	-
Rv3567c	-	8	101.5	116.3	109.9	102.8	114.6	118.7	-0.109	0.078	0.000	-0.092	0.058	0.106	105.9	132.9	135.3	117.5	131.0	135.6	0.96	0.88	0.81	0.88	0.88	0.88	0.764121	1.000000	-
Rv3568c	bphC	12	57.5	49.1	53.0	86.4	73.7	31.8	0.108	-0.100	0.000	0.657	0.441	-0.657	76.6	56.1	70.6	107.3	93.1	40.1	0.75	0.88	0.75	0.81	0.79	0.79	0.040219	0.408330	-
Rv3569c	bphD	13	100.2	61.4	81.3	62.1	81.7	58.9	0.285	-0.378	0.000	-0.363	0.006	-0.434	111.7	66.5	91.9	73.4	106.2	61.2	0.90	0.92	0.88	0.85	0.77	0.96	0.009834	0.137310	-
Rv3570c	-	16	66.2	60.4	85.1	100.6	113.6	66.9	-0.340	-0.462	0.000	0.228	0.396	-0.327	75.7	62.4	123.8	130.4	125.3	71.3	0.88	0.97	0.69	0.77	0.91	0.94	0.000003	0.000110	-
Rv3571	hmp	11	159.7	159.7	208.5	162.7	166.7	98.4	-0.375	-0.374	0.000	-0.349	-0.315	-1.046	164.7	175.7	218.5	173.2	166.7	98.4	0.97	0.91	0.95	0.94	1.00	1.00	0.071098	0.604860	-
Rv3572	-	7	148.4	182.0	141.2	158.7	202.5	147.6	0.070	0.355	0.000	0.164	0.505	0.063	148.4	182.0	152.0	158.7	202.5	147.6	1.00	1.00	0.93	1.00	1.00	1.00	0.704764	1.000000	-
Rv3573c	fadE34	20	148.6	157.8	164.6	153.0	149.0	141.3	-0.143	-0.058	0.000	-0.102	-0.139	-0.213	162.1	175.4	193.6	170.0	170.2	148.7	0.92	0.90	0.85	0.90	0.88	0.95	0.967748	1.000000	-
Rv3574	-	12	175.1	150.2	169.9	103.2	100.3	151.3	0.042	-0.173	0.000	-0.693	-0.732	-0.162	210.1	156.7	185.4	109.3	104.7	165.1	0.83	0.96	0.92	0.94	0.96	0.92	0.061292	0.545886	-
Rv3575c	-	16	106.4	117.5	107.8	146.7	142.5	140.4	-0.018	0.118	0.000	0.427	0.387	0.366	124.6	117.5	111.3	156.4	152.0	144.9	0.85	1.00	0.97	0.94	0.94	0.97	0.150455	0.944164	-
Rv3576	lppH	10	121.7	102.9	124.3	132.5	111.8	87.0	-0.029	-0.261	0.000	0.088	-0.147	-0.492	152.1	128.6	146.3	165.6	139.7	133.8	0.80	0.80	0.85	0.80	0.80	0.65	0.902471	1.000000	-
Rv3577	-	13	110.7	104.7	109.2	127.0	95.9	135.2	0.019	-0.058	0.000	0.209	-0.179	0.296	119.9	118.4	129.0	130.4	108.4	159.8	0.92	0.88	0.85	0.97	0.88	0.85	0.543528	1.000000	-
Rv3578	arsB2	14	349.7	252.3	278.6	285.7	274.8	278.8	0.323	-0.141	0.000	0.036	-0.020	0.001	367.2	252.3	278.6	285.7	274.8	278.8	0.95	1.00	1.00	1.00	1.00	1.00	0.457542	1.000000	-
Rv3579c	-	10	0.5	2.5	1.9	5.1	2.2	2.6	-0.313	0.125	0.000	0.556	0.057	0.135	16.4	12.6	18.9	22.0	21.7	25.7	0.03	0.20	0.10	0.23	0.10	0.10	0.223797	1.000000	-
Rv3580c	cysS	26	0.0	0.0	0.2	0.0	0.0	0.0	-0.068	-0.068	0.000	-0.068	-0.068	-0.068	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.02	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3581c	ispF	4	0.0	2.5	0.0	1.1	0.0	0.0	0.000	0.595	0.000	0.283	0.000	0.000	0.0	10.2	0.0	13.0	0.0	0.0	0.00	0.25	0.00	0.08	0.00	0.00	0.349970	1.000000	-
Rv3582c	ispD	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3583c	-	7	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3584	lpqE	5	160.6	207.0	150.7	159.1	148.4	179.3	0.089	0.445	0.000	0.075	-0.022	0.243	160.6	207.0	150.7	159.1	148.4	179.3	1.00	1.00	1.00	1.00	1.00	1.00	0.920731	1.000000	-
Rv3585	radA	18	285.7	274.5	293.2	272.5	292.9	266.7	-0.037	-0.094	0.000	-0.104	-0.002	-0.134	328.3	299.4	340.5	327.0	301.3	300.0	0.87	0.92	0.86	0.83	0.97	0.89	0.896421	1.000000	-
Rv3586	-	13	50.9	52.4	40.4	51.7	50.3	54.6	0.302	0.340	0.000	0.321	0.286	0.393	60.2	68.2	52.5	61.1	62.3	78.8	0.85	0.77	0.77	0.85	0.81	0.69	0.354157	1.000000	-
Rv3587c	-	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3588c	-	7	0.6	0.0	1.8	2.1	0.6	0.0	-0.292	-0.444	0.000	0.064	-0.269	-0.444	11.6	0.0	25.2	44.3	9.0	0.0	0.05	0.00	0.07	0.05	0.07	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3589	mutY	14	168.6	170.7	183.0	179.8	184.7	140.7	-0.115	-0.097	0.000	-0.025	0.013	-0.368	202.3	191.2	197.1	198.7	206.8	151.5	0.83	0.89	0.93	0.90	0.89	0.93	0.975437	1.000000	-
Rv3590c	PE_PGRS58	19	169.8	176.2	198.0	186.0	185.8	179.9	-0.216	-0.164	0.000	-0.088	-0.090	-0.135	201.6	181.0	221.3	200.0	196.1	213.7	0.84	0.97	0.89	0.93	0.95	0.84	0.529274	1.000000	-
Rv3591c	-	14	122.2	119.1	106.4	123.8	127.5	104.8	0.192	0.156	0.000	0.210	0.251	-0.020	131.6	123.5	114.5	133.3	127.5	112.9	0.93	0.96	0.93	0.93	1.00	0.93	0.870895	1.000000	-
Rv3592	TB11.2	2	198.7	265.2	181.5	193.0	214.3	260.9	0.127	0.535	0.000	0.086	0.234	0.512	198.7	265.2	181.5	193.0	214.3	260.9	1.00	1.00	1.00	1.00	1.00	1.00	0.620076	1.000000	-
Rv3593	lpqF	16	42.9	86.6	45.4	65.1	101.9	78.3	-0.076	0.860	0.000	0.476	1.083	0.723	52.8	98.9	55.9	69.5	108.7	86.4	0.81	0.88	0.81	0.94	0.94	0.91	0.000018	0.000536	-
Rv3594	-	14	236.4	253.6	256.6	250.0	244.4	274.1	-0.116	-0.016	0.000	-0.037	-0.069	0.094	254.6	273.2	276.3	269.2	263.2	284.3	0.93	0.93	0.93	0.93	0.93	0.96	0.998782	1.000000	-
Rv3595c	PE_PGRS59	15	173.8	202.0	179.8	191.8	176.7	184.8	-0.048	0.164	0.000	0.091	-0.025	0.039	200.5	233.1	199.8	191.8	196.3	198.0	0.87	0.87	0.90	1.00	0.90	0.93	0.322911	1.000000	-
Rv3596c	clpC1	25	0.0	0.2	0.0	0.0	0.0	0.0	0.000	0.059	0.000	0.000	0.000	0.000	0.0	10.4	0.0	0.0	0.0	0.0	0.00	0.02	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3597c	lsr2	3	2.5	5.0	0.0	9.6	7.3	7.0	0.587	1.007	0.000	1.543	1.293	1.261	22.6	15.1	0.0	17.2	14.5	14.0	0.11	0.33	0.00	0.56	0.50	0.50	0.366930	1.000000	-
Rv3598c	lysS	30	0.0	0.2	0.0	0.0	0.0	0.0	0.000	0.047	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.02	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3599c	-	1	0.0	0.0	37.8	0.0	0.0	0.0	-3.099	-3.099	0.000	-3.099	-3.099	-3.099	0.0	0.0	75.7	0.0	0.0	0.0	0.00	0.00	0.50	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3600c	-	12	209.3	238.2	208.9	213.1	214.7	237.1	0.003	0.186	0.000	0.028	0.039	0.179	259.8	259.9	238.7	232.5	234.2	284.6	0.81	0.92	0.88	0.92	0.92	0.83	0.958667	1.000000	-
Rv3601c	panD	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3602c	panC	11	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3603c	-	12	182.5	191.9	155.7	175.5	197.7	186.9	0.222	0.293	0.000	0.167	0.334	0.256	199.1	200.3	186.9	175.5	197.7	186.9	0.92	0.96	0.83	1.00	1.00	1.00	0.258511	1.000000	-
Rv3604c	-	13	121.3	189.1	124.1	86.4	133.6	123.2	-0.032	0.589	0.000	-0.497	0.102	-0.010	143.3	196.7	134.4	96.3	144.7	133.4	0.85	0.96	0.92	0.90	0.92	0.92	0.121382	0.827889	-
Rv3605c	-	6	247.9	181.1	209.5	219.7	249.9	241.3	0.238	-0.205	0.000	0.067	0.249	0.199	247.9	181.1	209.5	219.7	249.9	241.3	1.00	1.00	1.00	1.00	1.00	1.00	0.907721	1.000000	-
Rv3606c	folK	6	42.6	46.0	42.8	35.6	48.4	43.8	-0.007	0.094	0.000	-0.236	0.160	0.029	127.8	138.1	128.5	106.9	145.3	131.4	0.33	0.33	0.33	0.33	0.33	0.33	0.991521	1.000000	-
Rv3607c	folB	6	3.7	5.1	3.6	1.5	4.4	1.7	0.015	0.226	0.000	-0.400	0.118	-0.369	22.3	20.4	21.8	13.9	17.5	10.1	0.17	0.25	0.17	0.11	0.25	0.17	0.816221	1.000000	-
Rv3608c	folP1	7	0.0	0.0	0.9	0.0	0.0	0.0	-0.239	-0.239	0.000	-0.239	-0.239	-0.239	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.07	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3609c	folE	12	0.0	0.4	0.0	0.0	0.0	0.0	0.000	0.115	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.04	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3610c	ftsH	28	104.9	93.7	101.7	96.2	113.8	95.9	0.043	-0.112	0.000	-0.076	0.156	-0.080	137.6	107.1	135.5	115.4	151.7	105.3	0.76	0.88	0.75	0.83	0.75	0.91	0.220546	1.000000	-
Rv3611	-	1	80.5	147.7	81.4	110.6	182.3	177.0	-0.015	0.821	0.000	0.419	1.115	1.074	80.5	147.7	81.4	110.6	182.3	177.0	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3612c	-	4	142.2	229.4	119.2	132.0	192.7	211.1	0.245	0.917	0.000	0.141	0.671	0.800	142.2	229.4	119.2	132.0	192.7	211.1	1.00	1.00	1.00	1.00	1.00	1.00	0.001803	0.033312	-
Rv3613c	-	0	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3614c	-	8	170.8	198.8	172.0	148.9	158.7	200.7	-0.010	0.203	0.000	-0.202	-0.113	0.216	215.7	198.8	196.6	155.4	169.3	229.4	0.79	1.00	0.88	0.96	0.94	0.88	0.526040	1.000000	-
Rv3615c	-	10	153.4	164.0	135.8	147.2	138.1	141.4	0.171	0.264	0.000	0.112	0.024	0.056	184.1	193.0	193.9	191.9	153.5	148.8	0.83	0.85	0.70	0.77	0.90	0.95	0.825306	1.000000	-
Rv3616c	-	16	197.9	184.6	201.5	175.6	179.3	148.8	-0.025	-0.123	0.000	-0.193	-0.164	-0.425	306.4	246.1	307.0	247.9	212.5	176.3	0.65	0.75	0.66	0.71	0.84	0.84	0.701100	1.000000	-
Rv3617	ephA	16	251.7	276.2	258.2	279.3	293.8	290.0	-0.036	0.095	0.000	0.111	0.183	0.165	262.7	294.6	266.5	297.9	293.8	290.0	0.96	0.94	0.97	0.94	1.00	1.00	0.635669	1.000000	-
Rv3618	-	22	115.2	165.4	134.2	131.9	152.4	151.3	-0.213	0.291	0.000	-0.025	0.177	0.167	133.3	173.3	151.4	155.4	159.7	154.8	0.86	0.95	0.89	0.85	0.95	0.98	0.214732	1.000000	-
Rv3619c	esxV	3	329.0	345.9	300.5	307.2	353.8	404.9	0.129	0.200	0.000	0.031	0.232	0.424	329.0	345.9	300.5	307.2	353.8	404.9	1.00	1.00	1.00	1.00	1.00	1.00	0.853142	1.000000	-
Rv3620c	esxW	3	217.3	209.2	230.2	207.3	241.3	221.0	-0.081	-0.135	0.000	-0.148	0.067	-0.057	217.3	209.2	230.2	207.3	241.3	221.0	1.00	1.00	1.00	1.00	1.00	1.00	0.994602	1.000000	-
Rv3621c	PPE65	11	277.8	241.9	261.5	247.3	248.4	266.1	0.086	-0.110	0.000	-0.079	-0.073	0.025	295.7	241.9	302.8	281.4	248.4	266.1	0.94	1.00	0.86	0.88	1.00	1.00	0.437017	1.000000	-
Rv3622c	PE32	4	127.5	156.3	204.7	164.4	170.6	157.4	-0.662	-0.379	0.000	-0.308	-0.256	-0.369	127.5	156.3	204.7	164.4	170.6	157.4	1.00	1.00	1.00	1.00	1.00	1.00	0.901804	1.000000	-
Rv3623	lpqG	6	224.7	204.2	187.2	200.4	211.8	213.0	0.257	0.122	0.000	0.096	0.173	0.182	252.8	245.0	187.2	240.5	231.1	255.6	0.89	0.83	1.00	0.83	0.92	0.83	0.791858	1.000000	-
Rv3624c	hpt	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3625c	mesJ	7	0.0	1.5	0.0	0.0	0.0	0.7	0.000	0.369	0.000	0.000	0.000	0.182	0.0	10.2	0.0	0.0	0.0	9.4	0.00	0.14	0.00	0.00	0.00	0.07	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3626c	-	11	54.3	53.7	44.7	48.5	54.8	68.3	0.253	0.239	0.000	0.106	0.266	0.560	81.4	69.5	61.5	61.6	63.4	79.1	0.67	0.77	0.73	0.79	0.86	0.86	0.906654	1.000000	-
Rv3627c	-	13	27.2	63.8	32.9	36.7	63.1	31.0	-0.236	0.858	0.000	0.137	0.844	-0.075	48.3	79.0	57.1	53.0	71.3	47.4	0.56	0.81	0.58	0.69	0.88	0.65	0.074314	0.623469	-
Rv3628	ppa	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3629c	-	16	256.0	259.5	240.1	255.2	238.3	262.9	0.091	0.110	0.000	0.086	-0.011	0.128	267.1	267.8	240.1	272.2	254.1	271.4	0.96	0.97	1.00	0.94	0.94	0.97	0.854666	1.000000	-
Rv3630	-	22	149.4	136.8	138.9	152.8	200.4	110.5	0.102	-0.021	0.000	0.133	0.513	-0.318	159.1	146.8	149.1	155.1	200.4	110.5	0.94	0.93	0.93	0.98	1.00	1.00	0.046430	0.452949	-
Rv3631	-	5	39.0	41.6	30.6	30.3	32.7	49.6	0.306	0.387	0.000	-0.014	0.080	0.616	65.1	52.0	76.5	37.9	40.8	70.8	0.60	0.80	0.40	0.80	0.80	0.70	0.485200	1.000000	-
Rv3632	-	7	464.5	499.3	435.4	497.7	491.7	479.4	0.092	0.196	0.000	0.191	0.174	0.137	464.5	499.3	435.4	497.7	491.7	479.4	1.00	1.00	1.00	1.00	1.00	1.00	0.998302	1.000000	-
Rv3633	-	17	173.8	122.2	139.3	156.5	134.0	139.4	0.309	-0.182	0.000	0.162	-0.055	0.001	188.6	129.9	169.2	162.8	142.3	148.1	0.92	0.94	0.82	0.96	0.94	0.94	0.783009	1.000000	-
Rv3634c	galE1	18	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3635	-	24	23.7	35.4	22.7	15.8	34.1	20.2	0.051	0.544	0.000	-0.410	0.497	-0.136	35.5	47.1	41.9	27.1	40.9	28.5	0.67	0.75	0.54	0.58	0.83	0.71	0.000146	0.003618	-
Rv3636	-	5	117.2	126.2	128.8	116.7	96.2	122.2	-0.131	-0.029	0.000	-0.137	-0.403	-0.073	125.6	126.2	128.8	116.7	106.9	122.2	0.93	1.00	1.00	1.00	0.90	1.00	0.917541	1.000000	-
Rv3637	-	5	78.8	69.5	109.7	81.7	107.9	104.1	-0.452	-0.623	0.000	-0.403	-0.022	-0.072	98.5	86.8	156.7	102.2	134.9	130.1	0.80	0.80	0.70	0.80	0.80	0.80	0.927277	1.000000	-
Rv3638	-	12	75.5	86.4	101.6	85.7	90.1	97.5	-0.406	-0.222	0.000	-0.233	-0.165	-0.057	97.0	98.8	121.9	99.6	108.1	129.9	0.78	0.88	0.83	0.86	0.83	0.75	0.805378	1.000000	-
Rv3639c	-	9	141.0	92.5	167.1	139.4	107.5	119.5	-0.237	-0.820	0.000	-0.253	-0.613	-0.466	165.5	138.7	187.9	156.8	129.0	134.5	0.85	0.67	0.89	0.89	0.83	0.89	0.809821	1.000000	-
Rv3640c	-	13	161.2	142.9	162.9	156.8	152.6	143.7	-0.015	-0.183	0.000	-0.054	-0.092	-0.176	165.5	142.9	162.9	156.8	152.6	149.4	0.97	1.00	1.00	1.00	1.00	0.96	0.928325	1.000000	-
Rv3641c	fic	9	179.6	173.7	164.8	160.0	180.7	185.1	0.120	0.074	0.000	-0.041	0.130	0.163	179.6	173.7	164.8	160.0	180.7	185.1	1.00	1.00	1.00	1.00	1.00	1.00	0.961952	1.000000	-
Rv3642c	-	2	127.1	84.2	118.7	113.9	77.2	125.9	0.095	-0.472	0.000	-0.058	-0.590	0.082	127.1	84.2	118.7	113.9	77.2	125.9	1.00	1.00	1.00	1.00	1.00	1.00	0.911481	1.000000	-
Rv3643	-	6	52.1	61.9	64.6	72.4	80.7	61.6	-0.287	-0.058	0.000	0.152	0.300	-0.063	104.1	82.5	96.9	108.6	96.9	74.0	0.50	0.75	0.67	0.67	0.83	0.83	0.862262	1.000000	-
Rv3644c	-	14	0.5	0.0	0.0	0.0	0.3	0.0	0.147	0.000	0.000	0.000	0.090	0.000	22.6	0.0	0.0	0.0	9.0	0.0	0.02	0.00	0.00	0.00	0.04	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3645	-	20	77.5	34.4	114.3	3.5	5.2	17.8	-0.533	-1.599	0.000	-3.803	-3.542	-2.386	96.8	57.3	138.6	21.3	23.3	44.6	0.80	0.60	0.82	0.17	0.23	0.40	0.000000	0.000000	-
Rv3646c	topA	48	1.1	1.9	0.6	1.5	1.4	0.7	0.123	0.304	0.000	0.215	0.190	0.041	52.0	91.1	28.1	71.2	65.9	35.8	0.02	0.02	0.02	0.02	0.02	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3647c	-	8	63.2	57.3	50.9	61.0	75.5	74.1	0.288	0.156	0.000	0.240	0.526	0.501	108.4	83.3	135.7	97.6	100.6	91.2	0.58	0.69	0.38	0.62	0.75	0.81	0.664907	1.000000	-
Rv3648c	cspA	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3649	-	31	113.7	118.9	105.8	125.3	102.4	91.8	0.099	0.161	0.000	0.233	-0.045	-0.195	148.9	150.5	128.7	164.1	129.6	132.4	0.76	0.79	0.82	0.76	0.79	0.69	0.565403	1.000000	-
Rv3650	PE33	3	74.8	79.2	48.9	79.9	35.5	46.8	0.564	0.643	0.000	0.654	-0.415	-0.059	74.8	79.2	48.9	79.9	53.2	46.8	1.00	1.00	1.00	1.00	0.67	1.00	0.120453	0.823148	-
Rv3651	-	14	99.6	78.1	102.5	86.1	79.0	81.3	-0.040	-0.371	0.000	-0.238	-0.356	-0.317	110.1	81.0	130.5	92.7	88.5	87.5	0.90	0.96	0.79	0.93	0.89	0.93	0.569582	1.000000	-
Rv3652	PE_PGRS60	5	370.7	365.5	333.4	374.0	288.9	308.6	0.151	0.131	0.000	0.163	-0.204	-0.110	370.7	365.5	333.4	467.4	288.9	308.6	1.00	1.00	1.00	0.80	1.00	1.00	0.285286	1.000000	-
Rv3653	PE_PGRS61	5	131.9	154.6	178.9	118.3	165.2	166.7	-0.426	-0.205	0.000	-0.577	-0.112	-0.100	164.9	193.2	198.8	147.8	165.2	185.2	0.80	0.80	0.90	0.80	1.00	0.90	0.787173	1.000000	-
Rv3654c	-	1	58.2	0.0	150.8	0.0	0.0	0.0	-1.302	-4.962	0.000	-4.962	-4.962	-4.962	58.2	0.0	150.8	0.0	0.0	0.0	1.00	0.00	1.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3655c	-	5	118.1	106.2	117.6	114.8	105.2	126.4	0.006	-0.140	0.000	-0.033	-0.153	0.101	147.6	106.2	130.6	132.5	131.6	126.4	0.80	1.00	0.90	0.87	0.80	1.00	0.796180	1.000000	-
Rv3656c	-	4	212.1	185.8	254.8	318.7	254.6	218.7	-0.259	-0.445	0.000	0.318	-0.001	-0.216	254.5	247.8	254.8	347.7	339.5	291.6	0.83	0.75	1.00	0.92	0.75	0.75	0.629520	1.000000	-
Rv3657c	-	7	42.8	87.2	75.1	83.0	98.4	85.2	-0.745	0.202	0.000	0.136	0.368	0.171	52.9	93.9	80.9	96.9	106.0	91.7	0.81	0.93	0.93	0.86	0.93	0.93	0.474036	1.000000	-
Rv3658c	-	8	123.3	183.0	119.9	164.1	214.2	161.7	0.038	0.590	0.000	0.437	0.811	0.416	140.9	244.0	137.1	196.9	228.5	199.0	0.88	0.75	0.88	0.83	0.94	0.81	0.276877	1.000000	-
Rv3659c	-	6	311.1	312.1	319.3	311.4	245.1	252.1	-0.037	-0.033	0.000	-0.036	-0.375	-0.335	311.1	312.1	319.3	311.4	245.1	252.1	1.00	1.00	1.00	1.00	1.00	1.00	0.949611	1.000000	-
Rv3660c	-	7	39.8	45.2	46.0	46.0	36.6	63.4	-0.185	-0.021	0.000	0.001	-0.293	0.425	76.0	52.8	71.5	56.8	42.7	88.8	0.52	0.86	0.64	0.81	0.86	0.71	0.156666	0.966148	-
Rv3661	-	13	180.4	172.8	177.1	176.5	194.0	176.1	0.025	-0.034	0.000	-0.005	0.128	-0.008	185.1	204.3	184.2	191.2	194.0	190.8	0.97	0.85	0.96	0.92	1.00	0.92	0.514066	1.000000	-
Rv3662c	-	3	190.9	137.5	212.1	14.1	40.9	128.0	-0.148	-0.608	0.000	-3.509	-2.243	-0.707	190.9	137.5	212.1	15.8	40.9	128.0	1.00	1.00	1.00	0.89	1.00	1.00	0.000000	0.000000	-
Rv3663c	dppD	23	142.1	123.6	102.0	80.4	78.9	101.1	0.459	0.266	0.000	-0.326	-0.350	-0.013	175.1	153.7	138.0	99.0	90.8	116.2	0.81	0.80	0.74	0.81	0.87	0.87	0.039235	0.401402	-
Rv3664c	dppC	14	117.5	113.3	97.5	78.1	67.7	111.0	0.256	0.207	0.000	-0.304	-0.495	0.177	140.9	113.3	124.1	80.0	86.2	124.3	0.83	1.00	0.79	0.98	0.79	0.89	0.004049	0.065947	-
Rv3665c	dppB	14	143.3	91.3	129.1	78.0	80.4	116.1	0.145	-0.478	0.000	-0.693	-0.652	-0.147	154.3	98.3	150.6	86.2	86.5	130.1	0.93	0.93	0.86	0.90	0.93	0.89	0.080022	0.656651	-
Rv3666c	dppA	22	79.9	91.6	88.8	58.0	56.1	76.2	-0.144	0.044	0.000	-0.573	-0.617	-0.208	97.6	112.0	102.8	69.6	72.6	95.8	0.82	0.82	0.86	0.83	0.77	0.80	0.254367	1.000000	-
Rv3667	acs	36	76.5	101.2	70.1	126.8	117.7	94.5	0.117	0.500	0.000	0.811	0.708	0.406	99.6	130.2	91.8	157.5	141.3	117.4	0.77	0.78	0.76	0.81	0.83	0.81	0.002731	0.047579	-
Rv3668c	-	8	198.2	224.6	214.6	209.2	254.1	199.2	-0.112	0.064	0.000	-0.036	0.239	-0.105	198.2	224.6	214.6	209.2	254.1	199.2	1.00	1.00	1.00	1.00	1.00	1.00	0.955130	1.000000	-
Rv3669	-	4	20.6	31.9	15.6	18.7	30.2	36.1	0.311	0.839	0.000	0.200	0.772	0.995	61.8	127.6	62.5	74.8	120.9	144.4	0.33	0.25	0.25	0.25	0.25	0.25	0.362591	1.000000	-
Rv3670	ephE	16	5.0	14.3	28.5	18.7	33.4	3.8	-1.748	-0.798	0.000	-0.500	0.198	-1.922	19.9	25.3	53.6	40.8	46.5	12.3	0.25	0.56	0.53	0.46	0.72	0.31	0.000000	0.000002	-
Rv3671c	-	12	18.3	19.0	9.1	9.1	19.2	11.1	0.723	0.767	0.000	-0.005	0.775	0.187	43.9	32.6	24.3	21.8	30.7	24.2	0.42	0.58	0.38	0.42	0.62	0.46	0.264233	1.000000	-
Rv3672c	-	9	119.0	103.2	116.4	128.0	142.5	151.3	0.031	-0.165	0.000	0.132	0.281	0.365	133.9	116.1	123.2	144.0	142.5	170.3	0.89	0.89	0.94	0.89	1.00	0.89	0.716285	1.000000	-
Rv3673c	-	7	13.5	16.7	17.4	1.4	3.1	11.5	-0.282	-0.049	0.000	-1.817	-1.469	-0.447	25.7	33.4	34.9	14.4	14.5	20.1	0.52	0.50	0.50	0.10	0.21	0.57	0.000844	0.017265	-
Rv3674c	nth	11	211.4	207.3	183.4	228.2	241.8	211.0	0.200	0.172	0.000	0.308	0.390	0.197	240.6	228.0	224.1	228.2	241.8	232.1	0.88	0.91	0.82	1.00	1.00	0.91	0.310525	1.000000	-
Rv3675	-	5	139.4	143.3	152.0	112.4	130.1	130.5	-0.120	-0.082	0.000	-0.419	-0.216	-0.212	149.4	143.3	152.0	112.4	130.1	163.2	0.93	1.00	1.00	1.00	1.00	0.80	0.666507	1.000000	-
Rv3676	-	2	48.0	10.1	54.8	0.0	9.5	15.2	-0.173	-1.987	0.000	-3.580	-2.043	-1.567	48.0	13.4	54.8	0.0	12.7	15.2	1.00	0.75	1.00	0.00	0.75	1.00	0.000102	0.002598	-
Rv3677c	-	9	82.3	104.5	104.0	80.2	85.6	98.7	-0.321	0.006	0.000	-0.355	-0.266	-0.071	85.4	104.5	124.8	86.6	96.3	111.1	0.96	1.00	0.83	0.93	0.89	0.89	0.616720	1.000000	-
Rv3678c	-	6	243.6	236.7	257.8	238.9	198.1	191.5	-0.080	-0.121	0.000	-0.108	-0.372	-0.420	292.3	284.0	309.4	286.6	216.1	229.8	0.83	0.83	0.83	0.83	0.92	0.83	0.997618	1.000000	-
Rv3678A	-	2	68.5	101.6	57.6	63.7	69.0	69.1	0.230	0.768	0.000	0.132	0.239	0.243	68.5	101.6	57.6	63.7	69.0	69.1	1.00	1.00	1.00	1.00	1.00	1.00	0.296670	1.000000	-
Rv3679	-	12	250.6	264.1	250.2	224.2	246.1	245.4	0.002	0.077	0.000	-0.155	-0.024	-0.028	281.9	275.6	273.0	244.6	295.3	267.7	0.89	0.96	0.92	0.92	0.83	0.92	0.966682	1.000000	-
Rv3680	-	19	148.4	150.0	112.6	127.6	126.1	163.6	0.383	0.398	0.000	0.173	0.156	0.520	165.8	162.8	122.3	139.8	133.1	182.9	0.89	0.92	0.92	0.91	0.95	0.89	0.354940	1.000000	-
Rv3681c	whiB4	7	144.9	153.5	164.3	144.1	161.7	169.4	-0.176	-0.095	0.000	-0.183	-0.022	0.043	178.9	165.3	176.9	151.3	161.7	182.4	0.81	0.93	0.93	0.95	1.00	0.93	0.860056	1.000000	-
Rv3682	ponA2	36	91.4	158.3	92.7	143.3	197.5	115.5	-0.018	0.741	0.000	0.602	1.052	0.303	102.9	162.8	105.9	146.0	197.5	117.1	0.89	0.97	0.88	0.98	1.00	0.99	0.000000	0.000000	-
Rv3683	-	11	153.0	164.4	154.4	129.6	153.6	163.1	-0.012	0.088	0.000	-0.244	-0.007	0.077	157.8	180.8	178.8	129.6	153.6	163.1	0.97	0.91	0.86	1.00	1.00	1.00	0.354333	1.000000	-
Rv3684	-	16	157.2	185.3	183.3	161.1	184.2	149.4	-0.216	0.015	0.000	-0.181	0.007	-0.287	157.2	197.6	189.2	179.9	184.2	159.3	1.00	0.94	0.97	0.90	1.00	0.94	0.206871	1.000000	-
Rv3685c	cyp137	17	216.4	220.3	203.0	211.0	204.7	168.7	0.091	0.116	0.000	0.055	0.012	-0.260	225.3	249.7	209.1	224.2	232.0	173.8	0.96	0.88	0.97	0.94	0.88	0.97	0.536237	1.000000	-
Rv3686c	-	5	221.1	191.7	172.6	181.6	211.7	198.0	0.348	0.147	0.000	0.072	0.287	0.192	276.4	239.6	215.8	227.1	264.7	198.0	0.80	0.80	0.80	0.80	0.80	1.00	0.896927	1.000000	-
Rv3687c	rsfB	5	16.7	16.4	26.3	19.7	17.0	24.6	-0.530	-0.547	0.000	-0.342	-0.509	-0.079	27.8	20.5	43.8	32.8	28.3	35.1	0.60	0.80	0.60	0.60	0.60	0.70	0.486197	1.000000	-
Rv3688c	-	5	183.5	190.2	161.8	180.4	188.6	217.9	0.176	0.226	0.000	0.152	0.215	0.418	196.6	190.2	161.8	180.4	188.6	217.9	0.93	1.00	1.00	1.00	1.00	1.00	0.960373	1.000000	-
Rv3689	-	30	138.2	142.1	157.7	161.7	166.7	160.5	-0.183	-0.145	0.000	0.036	0.078	0.025	161.6	164.0	175.2	191.5	208.4	185.2	0.86	0.87	0.90	0.84	0.80	0.87	0.301676	1.000000	-
Rv3690	-	11	92.1	111.6	113.4	90.2	111.8	127.4	-0.286	-0.022	0.000	-0.315	-0.020	0.161	108.6	111.6	118.8	93.0	117.1	127.4	0.85	1.00	0.95	0.97	0.95	1.00	0.280920	1.000000	-
Rv3691	-	14	174.5	159.7	184.1	194.7	185.8	149.7	-0.076	-0.200	0.000	0.079	0.012	-0.290	192.8	172.0	198.3	204.5	200.0	161.2	0.90	0.93	0.93	0.95	0.93	0.93	0.994402	1.000000	-
Rv3692	moxR2	15	153.4	122.5	151.7	166.2	157.1	157.6	0.016	-0.297	0.000	0.128	0.049	0.054	164.4	122.5	162.5	166.2	168.3	163.1	0.93	1.00	0.93	1.00	0.93	0.97	0.382091	1.000000	-
Rv3693	-	13	170.2	145.2	167.5	152.6	128.8	146.5	0.022	-0.200	0.000	-0.130	-0.366	-0.188	207.4	157.2	174.2	186.0	145.6	158.7	0.82	0.92	0.96	0.82	0.88	0.92	0.673521	1.000000	-
Rv3694c	-	15	124.2	124.6	119.6	109.8	131.5	127.4	0.052	0.056	0.000	-0.119	0.131	0.088	199.7	186.8	188.9	170.4	179.3	173.8	0.62	0.67	0.63	0.64	0.73	0.73	0.999893	1.000000	-
Rv3695	-	9	118.7	120.4	108.0	150.7	133.5	111.7	0.131	0.150	0.000	0.463	0.294	0.046	178.1	154.8	176.7	156.5	150.2	143.6	0.67	0.78	0.61	0.96	0.89	0.78	0.291817	1.000000	-
Rv3696c	glpK	26	42.9	60.9	43.7	29.6	32.7	49.2	-0.023	0.437	0.000	-0.494	-0.367	0.153	52.3	63.4	56.8	41.2	42.6	55.6	0.82	0.96	0.77	0.72	0.77	0.88	0.001866	0.034305	-
Rv3697c	-	9	171.7	185.0	133.4	165.6	171.7	155.8	0.352	0.457	0.000	0.301	0.352	0.216	171.7	185.0	133.4	165.6	171.7	155.8	1.00	1.00	1.00	1.00	1.00	1.00	0.816123	1.000000	-
Rv3698	-	32	71.4	71.9	80.8	74.6	91.0	78.2	-0.168	-0.158	0.000	-0.109	0.161	-0.044	97.9	83.7	101.4	86.3	107.8	94.5	0.73	0.86	0.80	0.86	0.84	0.83	0.605697	1.000000	-
Rv3699	-	9	181.9	161.5	151.5	168.8	145.0	160.3	0.257	0.090	0.000	0.152	-0.061	0.080	188.9	161.5	170.4	175.3	145.0	160.3	0.96	1.00	0.89	0.96	1.00	1.00	0.849546	1.000000	-
Rv3700c	-	13	176.2	171.2	156.0	182.2	150.0	145.7	0.171	0.130	0.000	0.217	-0.055	-0.096	180.9	185.5	169.0	182.2	156.0	151.5	0.97	0.92	0.92	1.00	0.96	0.96	0.867383	1.000000	-
Rv3701c	-	15	37.7	35.4	59.3	46.6	46.0	41.2	-0.590	-0.671	0.000	-0.316	-0.333	-0.477	62.9	62.5	77.3	70.0	65.8	49.4	0.60	0.57	0.77	0.67	0.70	0.83	0.460313	1.000000	-
Rv3702c	-	8	110.5	74.6	147.9	76.0	119.3	92.9	-0.405	-0.943	0.000	-0.916	-0.299	-0.644	120.5	99.4	147.9	96.0	127.3	99.1	0.92	0.75	1.00	0.79	0.94	0.94	0.166457	0.995413	-
Rv3703c	-	17	203.3	199.4	224.5	205.6	182.7	197.0	-0.140	-0.167	0.000	-0.124	-0.290	-0.185	241.1	205.4	254.5	214.0	188.2	216.0	0.84	0.97	0.88	0.96	0.97	0.91	0.645549	1.000000	-
Rv3704c	gshA	12	260.2	213.3	241.4	235.0	228.3	237.3	0.106	-0.175	0.000	-0.038	-0.079	-0.025	323.0	232.7	305.0	291.7	249.1	271.2	0.81	0.92	0.79	0.81	0.92	0.88	0.968455	1.000000	-
Rv3705c	-	9	158.0	133.7	135.3	127.8	130.2	157.2	0.216	-0.017	0.000	-0.079	-0.054	0.209	170.6	150.4	152.2	143.8	130.2	176.9	0.93	0.89	0.89	0.89	1.00	0.89	0.846318	1.000000	-
Rv3705A	-	4	159.4	199.3	189.0	187.2	174.6	186.8	-0.239	0.075	0.000	-0.013	-0.111	-0.016	159.4	199.3	189.0	187.2	174.6	186.8	1.00	1.00	1.00	1.00	1.00	1.00	0.990373	1.000000	-
Rv3706c	-	3	26.8	18.6	8.4	26.8	38.5	33.5	1.248	0.816	0.000	1.247	1.700	1.523	30.2	18.6	16.8	30.2	38.5	33.5	0.89	1.00	0.50	0.89	1.00	1.00	0.025376	0.283620	-
Rv3707c	-	12	272.8	210.4	219.4	245.9	226.8	233.1	0.308	-0.059	0.000	0.161	0.046	0.085	280.6	210.4	219.4	245.9	226.8	233.1	0.97	1.00	1.00	1.00	1.00	1.00	0.892236	1.000000	-
Rv3708c	asd	9	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3709c	ask	12	0.0	0.0	0.0	0.4	0.0	0.0	0.000	0.000	0.000	0.101	0.000	0.000	0.0	0.0	0.0	13.0	0.0	0.0	0.00	0.00	0.00	0.03	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3710	leuA	26	249.8	236.3	257.0	225.1	224.7	236.8	-0.040	-0.119	0.000	-0.187	-0.190	-0.116	282.4	256.0	272.7	250.8	238.5	262.0	0.88	0.92	0.94	0.90	0.94	0.90	0.987518	1.000000	-
Rv3711c	dnaQ	14	111.8	111.8	99.8	118.8	121.8	127.1	0.156	0.156	0.000	0.240	0.275	0.334	114.5	120.4	111.8	127.9	131.2	127.1	0.98	0.93	0.89	0.93	0.93	1.00	0.497343	1.000000	-
Rv3712	-	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3713	cobQ2	9	0.0	0.0	0.0	0.5	0.0	1.2	0.000	0.000	0.000	0.146	0.000	0.310	0.0	0.0	0.0	14.4	0.0	10.8	0.00	0.00	0.00	0.04	0.00	0.11	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3714c	-	12	230.0	227.9	238.0	202.6	205.8	217.7	-0.048	-0.061	0.000	-0.227	-0.205	-0.126	230.0	227.9	248.3	202.6	205.8	217.7	1.00	1.00	0.96	1.00	1.00	1.00	0.930274	1.000000	-
Rv3715c	recR	4	183.2	157.6	163.0	149.2	168.1	162.6	0.163	-0.048	0.000	-0.124	0.043	-0.004	183.2	157.6	163.0	149.2	168.1	162.6	1.00	1.00	1.00	1.00	1.00	1.00	0.984201	1.000000	-
Rv3716c	-	3	163.9	126.0	136.7	178.8	139.2	95.7	0.253	-0.113	0.000	0.375	0.025	-0.493	163.9	126.0	164.0	178.8	139.2	95.7	1.00	1.00	0.83	1.00	1.00	1.00	0.760453	1.000000	-
Rv3717	-	10	165.6	142.6	149.6	168.6	173.9	162.5	0.142	-0.067	0.000	0.168	0.211	0.116	198.7	158.4	166.2	180.7	193.2	180.6	0.83	0.90	0.90	0.93	0.90	0.90	0.990920	1.000000	-
Rv3718c	-	5	83.9	68.6	72.6	128.9	116.2	94.0	0.196	-0.077	0.000	0.787	0.643	0.351	89.9	68.6	80.7	128.9	116.2	94.0	0.93	1.00	0.90	1.00	1.00	1.00	0.140132	0.912113	-
Rv3719	-	32	185.4	157.4	195.1	154.8	146.2	156.1	-0.072	-0.301	0.000	-0.324	-0.404	-0.312	209.4	183.1	211.6	167.0	153.4	175.3	0.89	0.86	0.92	0.93	0.95	0.89	0.537981	1.000000	-
Rv3720	-	31	186.6	195.4	218.2	163.2	161.4	189.4	-0.220	-0.156	0.000	-0.408	-0.424	-0.200	204.2	205.3	229.3	168.6	169.6	192.5	0.91	0.95	0.95	0.97	0.95	0.98	0.340649	1.000000	-
Rv3721c	dnaZX	23	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3722c	-	25	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3723	-	9	116.2	215.4	138.0	314.7	305.4	169.3	-0.239	0.624	0.000	1.161	1.118	0.286	120.7	215.4	138.0	314.7	343.6	169.3	0.96	1.00	1.00	1.00	0.89	1.00	0.000000	0.000018	-
Rv3724A	cut5a	2	93.8	170.2	170.6	137.9	117.7	187.1	-0.830	-0.003	0.000	-0.297	-0.517	0.129	112.5	170.2	227.5	137.9	117.7	187.1	0.83	1.00	0.75	1.00	1.00	1.00	0.855708	1.000000	-
Rv3724B	cut5b	17	179.7	184.8	162.7	201.7	164.5	174.7	0.139	0.178	0.000	0.301	0.015	0.100	203.7	209.4	167.7	209.9	174.8	191.6	0.88	0.88	0.97	0.96	0.94	0.91	0.736359	1.000000	-
Rv3725	-	11	272.3	280.8	259.7	301.1	298.5	324.5	0.067	0.111	0.000	0.209	0.197	0.316	272.3	308.9	259.7	331.2	298.5	324.5	1.00	0.91	1.00	0.91	1.00	1.00	0.102479	0.747565	-
Rv3726	-	15	164.2	130.0	143.7	176.0	160.8	148.8	0.186	-0.139	0.000	0.283	0.157	0.049	167.9	144.5	154.0	176.0	160.8	148.8	0.98	0.90	0.93	1.00	1.00	1.00	0.285657	1.000000	-
Rv3727	-	37	181.0	203.3	176.7	188.6	192.6	197.3	0.033	0.197	0.000	0.092	0.121	0.155	195.0	218.0	189.5	195.7	203.6	200.0	0.93	0.93	0.93	0.96	0.95	0.99	0.647867	1.000000	-
Rv3728	-	28	280.1	251.3	278.4	248.2	227.7	241.0	0.009	-0.145	0.000	-0.162	-0.284	-0.204	297.8	251.3	294.1	254.2	236.2	249.9	0.94	1.00	0.95	0.98	0.96	0.96	0.803558	1.000000	-
Rv3729	-	23	218.1	214.6	205.0	217.2	206.7	209.4	0.088	0.065	0.000	0.082	0.012	0.031	255.1	246.8	235.7	249.7	231.9	224.1	0.86	0.87	0.87	0.87	0.89	0.93	0.998322	1.000000	-
Rv3730c	-	19	227.1	238.0	262.6	218.3	218.0	223.5	-0.205	-0.139	0.000	-0.261	-0.263	-0.228	253.8	238.0	277.2	222.2	218.0	235.9	0.89	1.00	0.95	0.98	1.00	0.95	0.320659	1.000000	-
Rv3731	ligC	16	129.8	132.3	134.2	125.8	119.0	139.4	-0.046	-0.020	0.000	-0.090	-0.167	0.053	155.7	146.0	165.1	137.2	136.0	143.9	0.83	0.91	0.81	0.92	0.88	0.97	0.876777	1.000000	-
Rv3732	-	16	222.9	191.6	212.9	219.6	214.6	216.9	0.065	-0.148	0.000	0.044	0.011	0.026	267.5	204.4	219.7	245.2	228.9	247.8	0.83	0.94	0.97	0.90	0.94	0.88	0.715292	1.000000	-
Rv3733c	-	4	354.0	346.6	405.3	332.0	313.8	269.2	-0.193	-0.223	0.000	-0.284	-0.364	-0.582	472.0	462.2	463.2	442.7	418.4	358.9	0.75	0.75	0.88	0.75	0.75	0.75	0.999595	1.000000	-
Rv3734c	-	18	192.9	252.9	193.6	191.6	211.3	218.8	-0.005	0.377	0.000	-0.015	0.123	0.172	204.2	260.1	199.1	199.0	217.3	231.7	0.94	0.97	0.97	0.96	0.97	0.94	0.784380	1.000000	-
Rv3735	-	5	235.8	277.6	267.7	223.3	261.0	282.0	-0.179	0.052	0.000	-0.256	-0.036	0.074	235.8	277.6	267.7	223.3	261.0	282.0	1.00	1.00	1.00	1.00	1.00	1.00	0.969722	1.000000	-
Rv3736	-	19	156.4	173.5	164.8	171.8	182.2	199.6	-0.074	0.072	0.000	0.058	0.141	0.269	159.2	173.5	164.8	171.8	182.2	199.6	0.98	1.00	1.00	1.00	1.00	1.00	0.668761	1.000000	-
Rv3737	-	15	189.9	205.0	214.7	180.3	191.4	158.8	-0.173	-0.066	0.000	-0.246	-0.162	-0.424	224.9	227.7	247.8	208.1	220.8	183.2	0.84	0.90	0.87	0.87	0.87	0.87	0.999661	1.000000	-
Rv3738c	PPE66	16	272.9	258.4	269.9	247.1	252.0	220.9	0.016	-0.062	0.000	-0.125	-0.097	-0.284	272.9	258.4	278.6	247.1	252.0	220.9	1.00	1.00	0.97	1.00	1.00	1.00	0.983987	1.000000	-
Rv3739c	PPE67	4	287.4	297.3	282.6	315.3	316.5	330.7	0.024	0.072	0.000	0.156	0.161	0.223	287.4	297.3	282.6	315.3	316.5	377.9	1.00	1.00	1.00	1.00	1.00	0.88	0.859222	1.000000	-
Rv3740c	-	17	397.3	332.3	359.9	355.4	345.6	352.3	0.141	-0.113	0.000	-0.018	-0.058	-0.030	397.3	332.3	359.9	355.4	345.6	352.3	1.00	1.00	1.00	1.00	1.00	1.00	0.931684	1.000000	-
Rv3741c	-	7	227.7	202.3	196.0	198.5	193.1	179.8	0.211	0.044	0.000	0.018	-0.021	-0.121	281.3	217.9	211.1	198.5	225.3	179.8	0.81	0.93	0.93	1.00	0.86	1.00	0.495757	1.000000	-
Rv3742c	-	5	367.8	302.7	332.4	327.1	268.0	292.6	0.144	-0.133	0.000	-0.023	-0.305	-0.181	367.8	302.7	332.4	327.1	335.0	292.6	1.00	1.00	1.00	1.00	0.80	1.00	0.530803	1.000000	-
Rv3743c	ctpJ	29	178.7	170.8	179.7	168.6	167.4	159.4	-0.008	-0.071	0.000	-0.090	-0.100	-0.168	194.3	190.5	200.5	181.1	173.4	168.1	0.92	0.90	0.90	0.93	0.97	0.95	0.979188	1.000000	-
Rv3744	-	7	320.6	303.1	259.9	257.9	279.0	286.9	0.297	0.218	0.000	-0.011	0.100	0.140	374.0	353.6	259.9	300.9	325.5	334.7	0.86	0.86	1.00	0.86	0.86	0.86	0.763334	1.000000	-
Rv3745c	-	2	373.5	410.9	566.0	409.1	367.8	417.3	-0.593	-0.457	0.000	-0.464	-0.615	-0.435	373.5	410.9	566.0	409.1	367.8	417.3	1.00	1.00	1.00	1.00	1.00	1.00	0.986749	1.000000	-
Rv3746c	PE34	5	218.4	237.2	208.4	226.5	231.5	219.6	0.066	0.182	0.000	0.117	0.148	0.074	218.4	237.2	260.5	226.5	231.5	219.6	1.00	1.00	0.80	1.00	1.00	1.00	0.632525	1.000000	-
Rv3747	-	4	66.4	50.7	45.3	57.7	83.2	74.6	0.505	0.147	0.000	0.316	0.811	0.663	79.7	81.2	60.4	76.9	95.1	99.5	0.83	0.62	0.75	0.75	0.88	0.75	0.894070	1.000000	-
Rv3748	-	5	128.3	113.8	125.8	88.0	101.2	104.3	0.027	-0.139	0.000	-0.493	-0.301	-0.260	160.4	113.8	139.8	94.3	101.2	115.8	0.80	1.00	0.90	0.93	1.00	0.90	0.822219	1.000000	-
Rv3749c	-	12	154.8	165.3	161.0	144.9	143.9	176.8	-0.055	0.037	0.000	-0.147	-0.157	0.132	154.8	165.3	161.0	144.9	143.9	176.8	1.00	1.00	1.00	1.00	1.00	1.00	0.941937	1.000000	-
Rv3750c	-	5	134.1	137.9	106.5	121.3	106.8	159.7	0.319	0.358	0.000	0.181	0.005	0.563	134.1	137.9	106.5	121.3	106.8	159.7	1.00	1.00	1.00	1.00	1.00	1.00	0.529901	1.000000	-
Rv3751	-	1	349.6	345.8	418.6	390.5	324.1	339.4	-0.257	-0.272	0.000	-0.099	-0.364	-0.299	349.6	345.8	418.6	390.5	324.1	339.4	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3752c	-	2	7.4	12.8	3.1	2.2	3.6	5.1	0.606	1.127	0.000	-0.185	0.082	0.302	22.2	25.6	12.6	13.0	14.5	10.1	0.33	0.50	0.25	0.17	0.25	0.50	0.468727	1.000000	-
Rv3753c	-	4	17.1	26.9	18.8	29.9	30.7	16.2	-0.109	0.425	0.000	0.554	0.585	-0.167	40.9	53.8	30.0	51.3	40.9	21.6	0.42	0.50	0.62	0.58	0.75	0.75	0.421991	1.000000	-
Rv3754	tyrA	11	0.5	0.5	0.0	0.0	0.0	0.5	0.137	0.126	0.000	0.000	0.000	0.135	16.4	10.0	0.0	0.0	0.0	10.8	0.03	0.05	0.00	0.00	0.00	0.05	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3755c	-	11	207.0	192.2	180.1	118.0	141.9	156.8	0.196	0.091	0.000	-0.590	-0.333	-0.194	207.0	192.2	188.7	144.2	156.1	172.5	1.00	1.00	0.95	0.82	0.91	0.91	0.079680	0.655513	-
Rv3756c	proZ	13	222.6	211.8	203.2	170.1	183.0	195.9	0.128	0.058	0.000	-0.250	-0.147	-0.052	248.0	229.4	211.4	184.3	183.0	195.9	0.90	0.92	0.96	0.92	1.00	1.00	0.364496	1.000000	-
Rv3757c	proW	12	217.0	251.3	225.3	231.4	218.1	207.2	-0.053	0.154	0.000	0.038	-0.046	-0.118	244.1	287.2	257.5	260.3	237.9	226.0	0.89	0.88	0.88	0.89	0.92	0.92	0.999948	1.000000	-
Rv3758c	proV	13	72.5	96.8	71.3	74.6	73.6	79.4	0.022	0.415	0.000	0.060	0.041	0.145	88.4	132.5	88.3	90.9	95.6	121.5	0.82	0.73	0.81	0.82	0.77	0.65	0.045004	0.443940	-
Rv3759c	proX	12	34.4	32.6	36.2	31.5	37.4	41.1	-0.067	-0.132	0.000	-0.175	0.040	0.162	51.5	39.1	51.1	47.3	42.7	58.1	0.67	0.83	0.71	0.67	0.88	0.71	0.660894	1.000000	-
Rv3760	-	5	219.7	192.8	212.8	183.7	181.4	180.7	0.045	-0.139	0.000	-0.207	-0.224	-0.230	235.4	275.5	212.8	211.9	181.4	180.7	0.93	0.70	1.00	0.87	1.00	1.00	0.412506	1.000000	-
Rv3761c	fadE36	15	133.8	147.0	152.0	130.0	145.0	148.5	-0.178	-0.047	0.000	-0.218	-0.066	-0.033	140.0	157.5	162.9	146.3	167.3	153.6	0.96	0.93	0.93	0.89	0.87	0.97	0.818868	1.000000	-
Rv3762c	-	28	187.9	157.3	195.3	171.8	154.3	163.8	-0.054	-0.304	0.000	-0.180	-0.330	-0.247	199.8	163.1	198.9	173.9	160.0	173.1	0.94	0.96	0.98	0.99	0.96	0.95	0.836236	1.000000	-
Rv3763	lpqH	8	27.9	30.6	23.1	29.2	22.2	29.7	0.227	0.343	0.000	0.285	-0.044	0.306	55.7	54.4	52.8	53.9	32.3	59.4	0.50	0.56	0.44	0.54	0.69	0.50	0.766380	1.000000	-
Rv3764c	-	14	0.0	0.0	0.0	0.0	0.6	0.0	0.000	0.000	0.000	0.000	0.174	0.000	0.0	0.0	0.0	0.0	9.0	0.0	0.00	0.00	0.00	0.00	0.07	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3765c	-	12	154.8	143.3	137.3	139.0	139.0	156.3	0.167	0.060	0.000	0.017	0.017	0.181	154.8	143.3	137.3	139.0	139.0	156.3	1.00	1.00	1.00	1.00	1.00	1.00	0.932118	1.000000	-
Rv3766	-	15	172.8	134.9	191.7	166.4	145.8	155.1	-0.146	-0.491	0.000	-0.199	-0.383	-0.297	176.7	144.6	191.7	178.3	145.8	160.5	0.98	0.93	1.00	0.93	1.00	0.97	0.451354	1.000000	-
Rv3767c	-	14	119.8	123.4	136.2	135.2	138.2	159.4	-0.178	-0.137	0.000	-0.011	0.020	0.219	139.8	150.3	146.7	149.4	154.8	202.9	0.86	0.82	0.93	0.90	0.89	0.79	0.494161	1.000000	-
Rv3768	-	12	151.7	155.3	160.0	180.0	157.6	165.0	-0.075	-0.042	0.000	0.165	-0.022	0.042	176.1	169.5	182.9	185.2	171.9	172.1	0.86	0.92	0.88	0.97	0.92	0.96	0.960113	1.000000	-
Rv3769	-	1	228.6	157.0	144.5	143.0	141.7	81.1	0.644	0.116	0.000	-0.015	-0.028	-0.797	228.6	157.0	144.5	143.0	141.7	81.1	1.00	1.00	1.00	1.00	1.00	1.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3770c	-	6	339.1	306.3	302.6	351.1	280.0	245.9	0.162	0.017	0.000	0.211	-0.110	-0.294	339.1	306.3	302.6	351.1	280.0	245.9	1.00	1.00	1.00	1.00	1.00	1.00	0.803014	1.000000	-
Rv3770A	-	2	355.0	349.6	344.6	385.1	343.3	205.2	0.042	0.020	0.000	0.158	-0.006	-0.734	355.0	349.6	344.6	385.1	343.3	205.2	1.00	1.00	1.00	1.00	1.00	1.00	0.296903	1.000000	-
Rv3770B	-	2	423.3	318.7	322.3	320.1	241.4	341.4	0.388	-0.016	0.000	-0.010	-0.410	0.082	423.3	318.7	322.3	320.1	241.4	341.4	1.00	1.00	1.00	1.00	1.00	1.00	0.579863	1.000000	-
Rv3771c	-	2	238.6	130.0	57.9	205.6	149.4	163.7	1.953	1.101	0.000	1.743	1.295	1.423	357.9	259.9	115.8	411.3	298.7	163.7	0.67	0.50	0.50	0.50	0.50	1.00	0.483089	1.000000	-
Rv3772	hisC2	17	203.8	212.1	202.0	199.6	199.3	191.9	0.013	0.069	0.000	-0.016	-0.018	-0.072	231.0	300.4	245.2	216.6	242.0	191.9	0.88	0.71	0.82	0.92	0.82	1.00	0.016171	0.200376	-
Rv3773c	-	7	122.8	143.0	119.0	123.0	135.2	169.0	0.044	0.255	0.000	0.047	0.177	0.489	122.8	143.0	128.1	123.0	145.6	169.0	1.00	1.00	0.93	1.00	0.93	1.00	0.689638	1.000000	-
Rv3774	echA21	12	262.6	232.1	267.4	217.9	222.2	114.8	-0.026	-0.200	0.000	-0.289	-0.262	-1.185	286.5	242.2	267.4	237.7	222.2	114.8	0.92	0.96	1.00	0.92	1.00	1.00	0.000048	0.001316	-
Rv3775	lipE	20	271.6	205.2	295.7	197.0	192.7	91.8	-0.121	-0.517	0.000	-0.574	-0.605	-1.635	276.2	216.0	295.7	197.0	197.7	96.7	0.98	0.95	1.00	1.00	0.97	0.95	0.000000	0.000016	-
Rv3776	-	20	214.4	219.0	236.8	215.1	222.8	214.2	-0.140	-0.110	0.000	-0.136	-0.086	-0.142	214.4	230.5	242.9	215.1	222.8	214.2	1.00	0.95	0.97	1.00	1.00	1.00	0.536003	1.000000	-
Rv3777	-	13	229.0	188.2	160.6	178.4	190.3	196.2	0.499	0.223	0.000	0.147	0.238	0.281	270.6	188.2	181.5	178.4	190.3	212.6	0.85	1.00	0.88	1.00	1.00	0.92	0.034173	0.360710	-
Rv3778c	-	14	7.1	21.4	7.8	5.4	15.8	7.0	-0.080	1.043	0.000	-0.297	0.697	-0.090	25.0	30.0	21.9	20.8	26.0	19.7	0.29	0.71	0.36	0.26	0.61	0.36	0.003278	0.056137	-
Rv3779	-	40	159.3	165.1	142.9	152.6	147.2	161.8	0.152	0.201	0.000	0.092	0.041	0.173	175.4	178.5	158.8	171.2	163.6	165.9	0.91	0.93	0.90	0.89	0.90	0.97	0.738163	1.000000	-
Rv3780	-	6	7.9	8.4	0.0	7.7	6.2	11.9	1.368	1.420	0.000	1.350	1.159	1.758	23.7	20.1	0.0	27.9	18.5	17.9	0.33	0.42	0.00	0.28	0.33	0.67	0.062066	0.550317	-
Rv3781	rfbE	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3782	-	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3783	rfbD	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3784	-	24	261.4	244.1	245.2	225.4	249.7	243.6	0.090	-0.006	0.000	-0.119	0.026	-0.010	276.8	244.1	255.9	225.4	260.6	243.6	0.94	1.00	0.96	1.00	0.96	1.00	0.249504	1.000000	-
Rv3785	-	12	354.4	323.9	355.1	311.4	310.0	284.3	-0.003	-0.131	0.000	-0.187	-0.193	-0.316	354.4	323.9	355.1	311.4	310.0	284.3	1.00	1.00	1.00	1.00	1.00	1.00	0.925564	1.000000	-
Rv3786c	-	20	298.1	243.9	266.9	267.7	265.1	259.3	0.157	-0.128	0.000	0.004	-0.009	-0.040	298.1	243.9	266.9	267.7	265.1	266.0	1.00	1.00	1.00	1.00	1.00	0.97	0.990813	1.000000	-
Rv3787c	-	6	185.5	177.9	162.6	147.5	170.4	157.9	0.185	0.126	0.000	-0.136	0.066	-0.041	256.8	177.9	195.1	189.7	204.5	157.9	0.72	1.00	0.83	0.78	0.83	1.00	0.463783	1.000000	-
Rv3788	-	6	361.2	320.9	338.0	276.2	348.2	342.2	0.094	-0.074	0.000	-0.287	0.042	0.018	406.3	385.1	338.0	276.2	348.2	410.6	0.89	0.83	1.00	1.00	1.00	0.83	0.346623	1.000000	-
Rv3789	-	8	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3790	-	24	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3791	-	11	0.0	0.0	0.0	0.0	0.7	0.0	0.000	0.000	0.000	0.000	0.179	0.000	0.0	0.0	0.0	0.0	14.5	0.0	0.00	0.00	0.00	0.00	0.05	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3792	-	31	0.4	0.0	0.2	0.0	0.0	0.2	0.059	-0.057	0.000	-0.057	-0.057	-0.014	19.5	0.0	12.6	0.0	0.0	9.4	0.02	0.00	0.02	0.00	0.00	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3793	embC	39	0.2	0.0	0.5	0.0	0.7	0.0	-0.066	-0.133	0.000	-0.133	0.048	-0.133	14.0	0.0	18.9	0.0	26.2	0.0	0.02	0.00	0.03	0.00	0.03	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3794	embA	50	1.8	3.2	2.3	2.2	3.5	2.0	-0.098	0.159	0.000	-0.020	0.213	-0.067	91.7	158.4	115.8	110.9	116.1	99.2	0.02	0.02	0.02	0.02	0.03	0.02	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3795	embB	48	0.1	0.1	0.0	0.0	0.0	0.0	0.023	0.030	0.000	0.000	0.000	0.000	11.6	10.0	0.0	0.0	0.0	0.0	0.01	0.01	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3796	-	23	90.4	81.5	80.2	87.9	100.2	97.0	0.162	0.020	0.000	0.124	0.303	0.259	94.5	83.3	94.6	93.3	104.7	103.7	0.96	0.98	0.85	0.94	0.96	0.93	0.472916	1.000000	-
Rv3797	fadE35	20	255.1	249.5	236.2	237.0	234.5	248.4	0.109	0.077	0.000	0.005	-0.010	0.071	268.6	249.5	248.6	249.5	246.8	254.8	0.95	1.00	0.95	0.95	0.95	0.97	0.936709	1.000000	-
Rv3798	-	15	263.5	250.5	245.7	239.6	223.0	246.2	0.099	0.027	0.000	-0.036	-0.137	0.003	282.3	268.4	263.2	250.7	257.3	246.2	0.93	0.93	0.93	0.96	0.87	1.00	0.861560	1.000000	-
Rv3799c	accD4	16	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3800c	pks13	48	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3801c	fadD32	22	0.0	0.2	0.3	0.2	0.7	0.0	-0.080	-0.014	0.000	-0.025	0.098	-0.080	0.0	10.4	12.6	13.0	28.9	0.0	0.00	0.02	0.02	0.02	0.02	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3802c	-	20	215.0	175.5	208.4	26.3	20.4	108.1	0.043	-0.242	0.000	-2.768	-3.071	-0.916	215.0	184.7	213.8	43.9	35.5	113.8	1.00	0.95	0.97	0.60	0.57	0.95	0.000000	0.000000	-
Rv3803c	fbpD	14	75.4	67.7	69.6	68.9	65.2	87.3	0.108	-0.037	0.000	-0.014	-0.088	0.307	87.9	82.4	84.7	90.4	91.2	111.1	0.86	0.82	0.82	0.76	0.71	0.79	0.630547	1.000000	-
Rv3804c	fbpA	15	37.9	63.9	46.6	90.4	101.4	61.7	-0.266	0.418	0.000	0.889	1.045	0.372	41.6	63.9	53.7	94.7	101.4	63.9	0.91	1.00	0.87	0.96	1.00	0.97	0.000000	0.000000	-
Rv3805c	-	38	0.0	0.1	0.0	0.0	0.0	0.0	0.000	0.039	0.000	0.000	0.000	0.000	0.0	10.4	0.0	0.0	0.0	0.0	0.00	0.01	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3806c	-	17	0.0	0.3	0.0	0.0	0.0	0.3	0.000	0.086	0.000	0.000	0.000	0.089	0.0	10.4	0.0	0.0	0.0	10.8	0.00	0.03	0.00	0.00	0.00	0.03	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3807c	-	4	23.0	41.8	31.2	26.9	32.9	21.3	-0.374	0.369	0.000	-0.183	0.065	-0.466	39.4	66.9	62.5	53.9	65.8	42.5	0.58	0.62	0.50	0.50	0.50	0.50	0.864732	1.000000	-
Rv3808c	glfT	27	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3809c	glf	32	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3810	pirG	13	102.5	134.0	99.9	116.9	208.8	99.5	0.035	0.406	0.000	0.216	1.027	-0.005	148.1	158.4	108.2	138.1	226.2	117.6	0.69	0.85	0.92	0.85	0.92	0.85	0.086243	0.684368	-
Rv3811	-	25	186.9	213.4	202.4	195.4	203.2	180.8	-0.112	0.074	0.000	-0.050	0.005	-0.159	206.2	227.0	230.0	209.3	220.9	192.4	0.91	0.94	0.88	0.93	0.92	0.94	0.986380	1.000000	-
Rv3812	PE_PGRS62	27	102.9	119.8	113.8	99.6	95.7	99.9	-0.139	0.071	0.000	-0.184	-0.239	-0.179	112.6	134.8	139.7	107.5	107.6	110.1	0.91	0.89	0.81	0.93	0.89	0.91	0.655523	1.000000	-
Rv3813c	-	12	176.7	146.9	164.7	163.2	195.2	161.8	0.099	-0.160	0.000	-0.012	0.238	-0.025	192.8	160.2	179.6	178.1	195.2	161.8	0.92	0.92	0.92	0.92	1.00	1.00	0.697781	1.000000	-
Rv3814c	-	11	179.4	214.4	210.8	197.3	184.4	187.9	-0.227	0.024	0.000	-0.093	-0.188	-0.161	179.4	214.4	210.8	197.3	184.4	187.9	1.00	1.00	1.00	1.00	1.00	1.00	0.964202	1.000000	-
Rv3815c	-	11	288.0	286.3	299.1	280.7	283.5	274.1	-0.054	-0.062	0.000	-0.090	-0.076	-0.124	306.5	286.3	299.1	280.7	283.5	301.5	0.94	1.00	1.00	1.00	1.00	0.91	0.562520	1.000000	-
Rv3816c	-	12	19.0	12.7	22.7	20.2	21.0	14.6	-0.205	-0.645	0.000	-0.136	-0.093	-0.498	40.3	27.7	36.3	42.8	50.4	31.9	0.47	0.46	0.62	0.47	0.42	0.46	0.593857	1.000000	-
Rv3817	-	8	237.7	226.9	219.0	159.8	197.4	171.1	0.116	0.050	0.000	-0.443	-0.146	-0.347	237.7	259.3	219.0	174.4	210.6	171.1	1.00	0.88	1.00	0.92	0.94	1.00	0.426037	1.000000	-
Rv3818	-	31	99.1	105.6	106.6	121.1	115.8	102.7	-0.100	-0.013	0.000	0.176	0.114	-0.051	119.7	116.9	120.2	150.1	143.5	113.7	0.83	0.90	0.89	0.81	0.81	0.90	0.238150	1.000000	-
Rv3819	-	7	62.6	57.3	83.4	75.4	51.8	52.3	-0.386	-0.505	0.000	-0.136	-0.638	-0.625	73.1	61.7	97.3	88.0	60.4	61.0	0.86	0.93	0.86	0.86	0.86	0.86	0.968989	1.000000	-
Rv3820c	papA2	37	140.5	130.2	138.0	126.1	119.8	149.2	0.025	-0.080	0.000	-0.125	-0.197	0.109	177.2	153.0	179.1	142.8	145.3	178.0	0.79	0.85	0.77	0.88	0.82	0.84	0.626696	1.000000	-
Rv3821	-	17	233.7	219.3	188.1	205.3	214.6	235.8	0.306	0.216	0.000	0.123	0.186	0.319	270.9	240.5	220.5	218.1	251.6	250.6	0.86	0.91	0.85	0.94	0.85	0.94	0.831645	1.000000	-
Rv3822	-	35	78.1	85.6	91.3	72.8	79.7	92.5	-0.213	-0.088	0.000	-0.308	-0.186	0.017	97.6	101.6	116.2	86.9	87.1	99.6	0.80	0.84	0.79	0.84	0.91	0.93	0.407417	1.000000	-
Rv3823c	mmpL8	72	68.2	79.3	71.0	77.5	75.2	71.4	-0.054	0.149	0.000	0.118	0.077	0.007	118.9	107.7	113.6	113.9	105.1	92.6	0.57	0.74	0.62	0.68	0.72	0.77	0.210511	1.000000	-
Rv3824c	papA1	38	154.8	128.4	141.6	113.7	120.4	138.3	0.125	-0.136	0.000	-0.304	-0.226	-0.032	176.5	150.1	168.1	132.3	132.6	154.6	0.88	0.86	0.84	0.86	0.91	0.89	0.905745	1.000000	-
Rv3825c	pks2	106	255.9	215.3	266.8	208.0	196.1	223.9	-0.059	-0.303	0.000	-0.352	-0.434	-0.248	286.5	242.8	305.7	248.7	231.0	247.2	0.89	0.89	0.87	0.84	0.85	0.91	0.068984	0.593199	-
Rv3826	fadD23	46	27.5	31.3	31.2	24.5	29.9	32.6	-0.157	0.003	0.000	-0.294	-0.052	0.056	48.6	49.6	59.8	41.3	44.4	41.7	0.57	0.63	0.52	0.59	0.67	0.78	0.075454	0.625905	-
Rv3827c	-	18	182.3	180.1	179.0	193.4	178.4	166.5	0.026	0.008	0.000	0.108	-0.005	-0.102	205.1	202.6	201.4	197.0	200.7	171.3	0.89	0.89	0.89	0.98	0.89	0.97	0.674296	1.000000	-
Rv3828c	-	7	131.2	86.7	134.9	121.1	115.2	109.6	-0.038	-0.609	0.000	-0.150	-0.218	-0.287	137.8	86.7	145.2	133.8	115.2	109.6	0.95	1.00	0.93	0.90	1.00	1.00	0.690172	1.000000	-
Rv3829c	-	26	147.5	143.4	139.2	124.8	124.4	133.3	0.081	0.041	0.000	-0.152	-0.157	-0.061	213.1	173.4	195.7	162.2	161.7	144.4	0.69	0.83	0.71	0.77	0.77	0.92	0.279959	1.000000	-
Rv3830c	-	10	179.7	172.2	141.0	146.1	185.1	158.8	0.340	0.280	0.000	0.050	0.381	0.166	179.7	172.2	148.4	146.1	185.1	176.4	1.00	1.00	0.95	1.00	1.00	0.90	0.297927	1.000000	-
Rv3831	-	11	317.2	273.7	284.4	267.1	247.7	253.9	0.155	-0.054	0.000	-0.089	-0.196	-0.161	348.9	301.1	298.0	267.1	272.5	279.3	0.91	0.91	0.95	1.00	0.91	0.91	0.723647	1.000000	-
Rv3832c	-	8	140.3	141.0	128.8	132.5	146.8	161.0	0.119	0.126	0.000	0.040	0.182	0.311	146.4	173.6	137.3	132.5	146.8	171.7	0.96	0.81	0.94	1.00	1.00	0.94	0.438345	1.000000	-
Rv3833	-	10	142.8	184.3	189.6	198.5	200.4	210.8	-0.397	-0.040	0.000	0.064	0.078	0.149	158.6	204.8	210.7	229.1	222.7	234.2	0.90	0.90	0.90	0.87	0.90	0.90	0.864486	1.000000	-
Rv3834c	serS	21	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3835	-	15	201.7	192.3	176.1	200.2	229.7	199.7	0.191	0.124	0.000	0.180	0.374	0.177	206.3	206.1	182.2	200.2	229.7	199.7	0.98	0.93	0.97	1.00	1.00	1.00	0.613505	1.000000	-
Rv3836	-	5	216.7	185.0	153.9	172.8	149.8	176.1	0.480	0.258	0.000	0.162	-0.038	0.189	250.0	185.0	171.0	199.4	149.8	176.1	0.87	1.00	0.90	0.87	1.00	1.00	0.657571	1.000000	-
Rv3837c	-	10	261.8	204.8	205.5	210.8	229.2	205.1	0.342	-0.005	0.000	0.036	0.154	-0.003	290.9	204.8	228.3	234.3	241.2	205.1	0.90	1.00	0.90	0.90	0.95	1.00	0.597932	1.000000	-
Rv3838c	pheA	11	46.1	54.9	22.4	55.3	34.0	44.2	0.902	1.130	0.000	1.140	0.510	0.848	76.1	63.5	54.7	70.2	46.7	48.7	0.61	0.86	0.41	0.79	0.73	0.91	0.022359	0.258586	-
Rv3839	-	15	172.8	183.9	209.0	272.5	283.8	238.8	-0.268	-0.180	0.000	0.375	0.432	0.187	204.7	190.3	232.3	278.7	304.1	247.0	0.84	0.97	0.90	0.98	0.93	0.97	0.233381	1.000000	-
Rv3840	-	10	351.7	346.8	363.3	341.7	374.9	384.8	-0.046	-0.066	0.000	-0.087	0.045	0.082	363.8	365.0	403.6	341.7	394.6	384.8	0.97	0.95	0.90	1.00	0.95	1.00	0.820785	1.000000	-
Rv3841	bfrB	7	42.8	61.0	52.4	71.6	77.9	59.8	-0.265	0.200	0.000	0.415	0.529	0.174	89.9	170.7	122.3	136.7	181.7	93.0	0.48	0.36	0.43	0.52	0.43	0.64	0.808535	1.000000	-
Rv3842c	glpQ1	13	103.6	103.8	126.9	109.6	123.3	123.2	-0.280	-0.278	0.000	-0.203	-0.040	-0.042	130.4	108.0	157.1	115.5	128.3	123.2	0.79	0.96	0.81	0.95	0.96	1.00	0.185462	1.000000	-
Rv3843c	-	17	26.8	22.2	19.7	27.2	34.2	18.7	0.368	0.139	0.000	0.386	0.667	-0.056	97.8	68.5	66.9	92.6	105.6	49.0	0.27	0.32	0.29	0.29	0.32	0.38	0.598325	1.000000	-
Rv3844	-	3	308.7	317.2	284.4	266.1	294.2	267.0	0.116	0.155	0.000	-0.094	0.048	-0.090	308.7	317.2	284.4	266.1	294.2	267.0	1.00	1.00	1.00	1.00	1.00	1.00	0.994449	1.000000	-
Rv3845	-	5	236.0	234.1	229.2	282.4	178.3	205.0	0.041	0.030	0.000	0.296	-0.353	-0.157	236.0	234.1	229.2	282.4	222.9	205.0	1.00	1.00	1.00	1.00	0.80	1.00	0.476946	1.000000	-
Rv3846	sodA	12	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3847	-	5	0.8	1.0	0.0	1.0	3.3	3.0	0.207	0.263	0.000	0.253	0.722	0.671	11.6	10.0	0.0	14.4	10.8	14.8	0.07	0.10	0.00	0.07	0.30	0.20	0.784074	1.000000	-
Rv3848	-	8	137.1	136.8	149.2	130.7	122.0	134.8	-0.119	-0.121	0.000	-0.184	-0.280	-0.141	173.1	199.0	238.8	196.1	150.2	196.1	0.79	0.69	0.62	0.67	0.81	0.69	0.961789	1.000000	-
Rv3849	espR	9	138.0	170.6	95.7	135.7	152.1	109.0	0.506	0.803	0.000	0.484	0.643	0.179	138.0	170.6	95.7	135.7	152.1	109.0	1.00	1.00	1.00	1.00	1.00	1.00	0.125730	0.843132	-
Rv3850	-	5	230.3	247.2	224.3	157.5	185.7	205.5	0.037	0.137	0.000	-0.497	-0.266	-0.124	230.3	247.2	224.3	157.5	185.7	205.5	1.00	1.00	1.00	1.00	1.00	1.00	0.282626	1.000000	-
Rv3851	-	2	174.8	129.7	190.7	141.8	147.9	137.0	-0.122	-0.539	0.000	-0.415	-0.356	-0.463	174.8	129.7	190.7	141.8	147.9	137.0	1.00	1.00	1.00	1.00	1.00	1.00	0.853548	1.000000	-
Rv3852	hns	4	272.7	240.7	168.7	224.8	226.2	292.4	0.677	0.500	0.000	0.403	0.412	0.776	272.7	240.7	168.7	224.8	226.2	292.4	1.00	1.00	1.00	1.00	1.00	1.00	0.763259	1.000000	-
Rv3853	menG	4	149.8	83.4	95.3	105.5	114.4	117.2	0.625	-0.184	0.000	0.140	0.250	0.284	199.7	111.1	127.1	140.7	152.5	117.2	0.75	0.75	0.75	0.75	0.75	1.00	0.115693	0.799142	-
Rv3854c	ethA	30	137.6	141.3	116.8	145.8	139.2	132.9	0.227	0.264	0.000	0.307	0.243	0.179	165.2	160.0	140.2	174.9	163.8	150.4	0.83	0.88	0.83	0.83	0.85	0.88	0.958861	1.000000	-
Rv3855	ethR	10	176.4	164.0	152.3	163.8	162.8	141.2	0.206	0.104	0.000	0.102	0.094	-0.105	176.4	164.0	169.2	163.8	162.8	156.9	1.00	1.00	0.90	1.00	1.00	0.90	0.420081	1.000000	-
Rv3856c	-	8	156.2	146.2	112.8	137.9	141.6	118.0	0.452	0.360	0.000	0.278	0.316	0.062	163.0	156.0	120.3	157.6	161.9	125.9	0.96	0.94	0.94	0.88	0.88	0.94	0.787031	1.000000	-
Rv3857c	-	3	214.5	220.3	218.1	254.8	248.7	245.1	-0.024	0.014	0.000	0.220	0.185	0.164	214.5	220.3	218.1	254.8	248.7	245.1	1.00	1.00	1.00	1.00	1.00	1.00	0.988907	1.000000	-
Rv3858c	gltD	10	8.0	4.5	14.4	10.7	4.5	1.6	-0.579	-1.025	0.000	-0.301	-1.027	-1.566	24.0	15.1	48.0	24.8	18.1	10.3	0.33	0.30	0.30	0.43	0.25	0.15	0.003391	0.057326	-
Rv3859c	gltB	72	9.0	2.9	8.1	7.5	3.1	1.3	0.097	-0.720	0.000	-0.064	-0.699	-1.054	24.3	13.7	29.8	21.4	13.8	11.0	0.37	0.22	0.27	0.35	0.22	0.12	0.000000	0.000000	-
Rv3860	-	12	307.4	300.0	314.8	292.9	298.9	291.8	-0.034	-0.068	0.000	-0.103	-0.074	-0.108	307.4	300.0	314.8	292.9	298.9	291.8	1.00	1.00	1.00	1.00	1.00	1.00	0.999643	1.000000	-
Rv3861	-	1	5.5	0.0	0.0	19.4	29.8	14.1	1.066	0.000	0.000	2.289	2.797	1.934	16.4	0.0	0.0	29.2	29.8	28.2	0.33	0.00	0.00	0.67	1.00	0.50	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3862c	whiB6	6	144.3	157.7	115.7	158.7	172.9	148.5	0.307	0.430	0.000	0.439	0.559	0.346	162.4	189.3	138.9	168.1	172.9	162.0	0.89	0.83	0.83	0.94	1.00	0.92	0.907874	1.000000	-
Rv3863	-	14	34.3	50.3	38.6	62.6	62.6	57.2	-0.152	0.342	0.000	0.631	0.633	0.512	95.9	67.1	83.2	67.4	73.1	76.3	0.36	0.75	0.46	0.93	0.86	0.75	0.000011	0.000351	-
Rv3864	-	14	45.2	48.3	41.9	58.1	70.3	44.8	0.099	0.184	0.000	0.429	0.682	0.087	86.3	64.4	83.8	81.4	93.7	54.6	0.52	0.75	0.50	0.71	0.75	0.82	0.223414	1.000000	-
Rv3865	-	9	57.2	82.0	41.4	48.5	60.1	63.0	0.423	0.908	0.000	0.207	0.489	0.552	73.5	86.9	49.6	62.4	60.1	63.0	0.78	0.94	0.83	0.78	1.00	1.00	0.054835	0.502336	-
Rv3866	-	11	95.2	130.5	129.0	107.5	120.0	139.2	-0.418	0.017	0.000	-0.252	-0.100	0.106	116.4	151.2	157.6	136.4	132.0	145.8	0.82	0.86	0.82	0.79	0.91	0.95	0.786182	1.000000	-
Rv3867	-	5	180.2	160.5	155.2	165.6	166.6	166.2	0.210	0.047	0.000	0.091	0.099	0.096	180.2	160.5	155.2	165.6	166.6	166.2	1.00	1.00	1.00	1.00	1.00	1.00	0.996722	1.000000	-
Rv3868	-	28	149.7	172.3	157.3	144.0	153.9	158.3	-0.069	0.128	0.000	-0.124	-0.031	0.009	172.3	185.6	169.4	159.1	156.7	173.8	0.87	0.93	0.93	0.90	0.98	0.91	0.558859	1.000000	-
Rv3869	-	27	254.8	239.5	234.9	249.9	262.0	231.7	0.115	0.027	0.000	0.088	0.155	-0.020	278.9	269.4	269.9	289.2	294.8	245.3	0.91	0.89	0.87	0.86	0.89	0.94	0.942912	1.000000	-
Rv3870	-	36	122.9	119.4	126.8	122.9	131.4	141.1	-0.044	-0.084	0.000	-0.044	0.049	0.149	138.2	128.3	154.8	135.4	139.2	149.4	0.89	0.93	0.82	0.91	0.94	0.94	0.625257	1.000000	-
Rv3871	-	22	153.8	161.7	157.9	162.3	159.2	153.5	-0.037	0.033	0.000	0.038	0.011	-0.039	203.0	209.2	224.1	223.1	200.1	187.7	0.76	0.77	0.70	0.73	0.80	0.82	0.997518	1.000000	-
Rv3872	PE35	1	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1, not analyzed
Rv3873	PPE68	10	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3874	esxB	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3875	esxA	4	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3876	-	19	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3877	-	25	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3878	-	5	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3879c	-	30	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3880c	-	4	326.6	280.6	318.4	298.8	260.3	242.6	0.036	-0.179	0.000	-0.090	-0.286	-0.385	326.6	374.2	424.5	298.8	260.3	277.3	1.00	0.75	0.75	1.00	1.00	0.88	0.353001	1.000000	-
Rv3881c	-	21	227.1	206.3	195.6	192.5	188.3	180.4	0.210	0.075	0.000	-0.023	-0.054	-0.114	246.6	216.6	216.2	212.8	208.1	180.4	0.92	0.95	0.90	0.90	0.90	1.00	0.635354	1.000000	-
Rv3882c	-	21	266.2	254.0	263.7	231.6	235.5	217.9	0.013	-0.053	0.000	-0.184	-0.160	-0.270	284.3	254.0	276.9	231.6	247.3	217.9	0.94	1.00	0.95	1.00	0.95	1.00	0.309818	1.000000	-
Rv3883c	mycP1	14	261.5	263.7	266.5	256.9	241.9	279.6	-0.027	-0.015	0.000	-0.052	-0.137	0.068	305.1	263.7	276.4	276.6	282.3	301.1	0.86	1.00	0.96	0.93	0.86	0.93	0.523485	1.000000	-
Rv3884c	-	31	128.2	138.4	149.4	119.9	128.3	135.8	-0.213	-0.107	0.000	-0.306	-0.212	-0.133	142.0	147.9	162.5	137.6	137.1	150.3	0.90	0.94	0.92	0.87	0.94	0.90	0.934662	1.000000	-
Rv3885c	-	25	130.6	111.5	165.2	116.9	135.5	112.9	-0.328	-0.547	0.000	-0.482	-0.277	-0.530	155.5	126.7	187.8	139.1	161.3	131.2	0.84	0.88	0.88	0.84	0.84	0.86	0.860131	1.000000	-
Rv3886c	mycP2	22	148.3	115.9	129.8	122.8	127.8	136.1	0.186	-0.157	0.000	-0.076	-0.021	0.065	155.4	127.4	142.8	124.7	133.9	139.2	0.95	0.91	0.91	0.98	0.95	0.98	0.724289	1.000000	-
Rv3887c	-	26	124.9	101.6	120.6	119.3	118.1	124.4	0.049	-0.236	0.000	-0.015	-0.029	0.043	149.9	122.9	153.0	136.8	130.6	134.8	0.83	0.83	0.79	0.87	0.90	0.92	0.911794	1.000000	-
Rv3888c	-	26	22.2	24.6	21.2	25.8	21.7	25.9	0.057	0.176	0.000	0.234	0.030	0.241	54.2	53.2	61.2	64.9	56.5	50.0	0.41	0.46	0.35	0.40	0.38	0.52	0.906411	1.000000	-
Rv3889c	-	15	311.9	288.8	310.3	265.8	253.2	233.8	0.007	-0.102	0.000	-0.219	-0.288	-0.401	334.2	320.9	332.4	278.2	261.9	233.8	0.93	0.90	0.93	0.96	0.97	1.00	0.841552	1.000000	-
Rv3890c	esxC	5	344.5	347.0	323.4	335.5	334.5	345.7	0.090	0.100	0.000	0.052	0.048	0.095	344.5	347.0	323.4	335.5	334.5	432.1	1.00	1.00	1.00	1.00	1.00	0.80	0.396123	1.000000	-
Rv3891c	esxD	8	101.2	94.3	132.5	106.5	106.4	121.6	-0.373	-0.469	0.000	-0.303	-0.304	-0.120	151.8	125.8	192.8	170.4	130.9	129.7	0.67	0.75	0.69	0.62	0.81	0.94	0.667728	1.000000	-
Rv3892c	PPE69	10	193.9	192.8	194.0	155.3	189.6	149.7	-0.000	-0.008	0.000	-0.311	-0.032	-0.363	200.6	192.8	194.0	155.3	189.6	149.7	0.97	1.00	1.00	1.00	1.00	1.00	0.777730	1.000000	-
Rv3893c	PE36	2	750.0	652.0	635.6	743.1	597.6	506.3	0.237	0.036	0.000	0.224	-0.088	-0.325	750.0	652.0	635.6	743.1	597.6	506.3	1.00	1.00	1.00	1.00	1.00	1.00	0.101897	0.747565	-
Rv3894c	-	45	178.3	156.1	171.4	150.8	150.5	140.5	0.055	-0.130	0.000	-0.179	-0.181	-0.277	189.5	165.3	181.4	157.9	159.4	150.6	0.94	0.94	0.94	0.96	0.94	0.93	0.980740	1.000000	-
Rv3895c	-	11	269.8	206.1	223.4	222.6	225.4	254.4	0.267	-0.114	0.000	-0.005	0.013	0.184	287.2	226.7	258.7	244.9	225.4	266.6	0.94	0.91	0.86	0.91	1.00	0.95	0.876419	1.000000	-
Rv3896c	-	14	281.2	229.1	266.3	232.0	225.6	218.3	0.078	-0.213	0.000	-0.195	-0.234	-0.281	281.2	229.1	266.3	232.0	225.6	218.3	1.00	1.00	1.00	1.00	1.00	1.00	0.634489	1.000000	-
Rv3897c	-	6	203.2	228.4	262.7	208.9	217.0	243.3	-0.362	-0.198	0.000	-0.323	-0.270	-0.108	203.2	228.4	262.7	208.9	217.0	243.3	1.00	1.00	1.00	1.00	1.00	1.00	0.943790	1.000000	-
Rv3898c	-	6	217.4	255.7	236.5	197.3	198.0	258.0	-0.118	0.111	0.000	-0.255	-0.250	0.123	217.4	255.7	236.5	197.3	198.0	258.0	1.00	1.00	1.00	1.00	1.00	1.00	0.846812	1.000000	-
Rv3899c	-	15	372.6	354.8	399.7	351.6	320.9	278.3	-0.100	-0.170	0.000	-0.183	-0.312	-0.515	409.0	409.3	444.1	376.7	332.0	309.2	0.91	0.87	0.90	0.93	0.97	0.90	0.964516	1.000000	-
Rv3900c	-	14	157.3	138.7	153.0	157.7	133.6	123.9	0.039	-0.137	0.000	0.042	-0.189	-0.294	227.9	176.5	194.7	189.2	162.6	144.5	0.69	0.79	0.79	0.83	0.82	0.86	0.950786	1.000000	-
Rv3901c	-	14	416.1	377.9	398.1	400.0	341.4	370.1	0.063	-0.074	0.000	0.007	-0.219	-0.104	426.3	377.9	412.8	420.0	341.4	398.6	0.98	1.00	0.96	0.95	1.00	0.93	0.863980	1.000000	-
Rv3902c	-	23	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3903c	-	46	171.6	146.6	158.1	148.4	137.0	163.9	0.114	-0.106	0.000	-0.088	-0.200	0.050	229.9	168.5	184.2	184.5	157.6	195.9	0.75	0.87	0.86	0.80	0.87	0.84	0.355012	1.000000	-
Rv3904c	esxE	2	149.0	104.7	141.6	145.8	176.8	111.6	0.071	-0.419	0.000	0.041	0.310	-0.330	178.8	209.4	283.2	145.8	176.8	111.6	0.83	0.50	0.50	1.00	1.00	1.00	0.346171	1.000000	-
Rv3905c	esxF	5	323.6	259.9	280.0	303.5	279.9	333.0	0.206	-0.105	0.000	0.115	-0.000	0.246	323.6	259.9	280.0	303.5	279.9	333.0	1.00	1.00	1.00	1.00	1.00	1.00	0.986830	1.000000	-
Rv3906c	-	8	269.3	239.0	258.4	220.1	219.4	226.6	0.059	-0.110	0.000	-0.227	-0.231	-0.185	269.3	239.0	275.6	240.1	219.4	259.0	1.00	1.00	0.94	0.92	1.00	0.88	0.694325	1.000000	-
Rv3907c	pcnA	17	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
Rv3908	-	11	35.6	58.5	32.9	58.0	59.7	37.3	0.096	0.742	0.000	0.731	0.770	0.155	73.4	85.8	72.5	95.7	87.6	63.1	0.48	0.68	0.45	0.61	0.68	0.59	0.883797	1.000000	-
Rv3909	-	37	0.0	0.0	0.0	0.3	0.1	0.0	0.000	0.000	0.000	0.074	0.035	0.000	0.0	0.0	0.0	14.6	9.0	0.0	0.00	0.00	0.00	0.02	0.01	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3910	-	49	35.5	61.6	36.4	74.4	79.0	50.8	-0.033	0.685	0.000	0.939	1.020	0.428	121.3	194.7	123.1	227.9	242.0	155.4	0.29	0.32	0.30	0.33	0.33	0.33	0.041761	0.421836	-
Rv3911	sigM	9	227.8	227.5	258.1	263.8	234.0	245.0	-0.177	-0.178	0.000	0.031	-0.138	-0.073	227.8	227.5	258.1	263.8	234.0	245.0	1.00	1.00	1.00	1.00	1.00	1.00	0.982475	1.000000	-
Rv3912	-	8	362.9	331.6	325.5	337.3	276.0	270.7	0.155	0.026	0.000	0.050	-0.234	-0.262	414.8	378.9	347.2	404.7	294.4	309.4	0.88	0.88	0.94	0.83	0.94	0.88	0.981779	1.000000	-
Rv3913	trxB2	16	0.0	0.0	0.4	0.0	0.0	0.0	-0.109	-0.109	0.000	-0.109	-0.109	-0.109	0.0	0.0	12.6	0.0	0.0	0.0	0.00	0.00	0.03	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3914	trxC	5	6.0	15.3	6.3	2.0	3.6	11.5	-0.038	0.842	0.000	-0.698	-0.395	0.544	15.0	21.8	31.5	14.8	18.0	28.7	0.40	0.70	0.20	0.13	0.20	0.40	0.047405	0.456289	-
Rv3915	-	23	0.0	0.2	0.0	0.0	0.0	0.0	0.000	0.061	0.000	0.000	0.000	0.000	0.0	10.0	0.0	0.0	0.0	0.0	0.00	0.02	0.00	0.00	0.00	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3916c	-	8	216.8	165.2	207.4	145.1	147.3	178.9	0.063	-0.319	0.000	-0.501	-0.480	-0.208	226.2	176.3	207.4	151.4	157.1	178.9	0.96	0.94	1.00	0.96	0.94	1.00	0.971582	1.000000	-
Rv3917c	parB	17	1.0	1.8	0.0	3.2	0.7	0.9	0.261	0.444	0.000	0.720	0.187	0.232	16.9	10.2	0.0	18.3	11.8	9.9	0.06	0.18	0.00	0.18	0.06	0.09	0.038551	0.396442	-
Rv3918c	parA	18	6.5	11.6	5.7	4.0	9.0	5.3	0.104	0.625	0.000	-0.259	0.382	-0.065	44.2	23.1	68.8	17.9	21.6	27.1	0.15	0.50	0.08	0.22	0.42	0.19	0.000014	0.000433	-
Rv3919c	gidB	13	120.7	117.0	117.3	86.1	98.6	101.9	0.040	-0.004	0.000	-0.426	-0.240	-0.194	130.8	126.7	132.6	98.7	102.5	110.4	0.92	0.92	0.88	0.87	0.96	0.92	0.928791	1.000000	-
Rv3920c	-	3	225.5	298.3	226.3	302.8	344.7	275.6	-0.005	0.391	0.000	0.412	0.596	0.279	290.0	358.0	339.5	454.2	413.7	275.6	0.78	0.83	0.67	0.67	0.83	1.00	0.912026	1.000000	-
Rv3921c	-	20	0.0	0.3	0.0	0.0	0.2	0.0	0.000	0.073	0.000	0.000	0.064	0.000	0.0	10.4	0.0	0.0	9.0	0.0	0.00	0.03	0.00	0.00	0.03	0.00	1.000000	1.000000	low saturation (<15%) across all conditions (pan-growth-defect) - not analyzed
Rv3922c	-	11	63.2	89.6	76.9	63.4	84.9	91.4	-0.263	0.207	0.000	-0.260	0.134	0.234	83.5	109.5	112.8	87.2	116.7	125.6	0.76	0.82	0.68	0.73	0.73	0.73	0.827593	1.000000	-
Rv3923c	rnpA	3	2.5	1.7	2.1	1.6	0.0	1.6	0.081	-0.091	0.000	-0.096	-0.506	-0.113	22.6	10.0	12.6	14.8	0.0	9.4	0.11	0.17	0.17	0.11	0.00	0.17	0.998037	1.000000	-
Rv3924c	rpmH	2	0.0	0.0	0.0	0.0	0.0	0.0	0.000	0.000	0.000	0.000	0.000	0.000	0.0	0.0	0.0	0.0	0.0	0.0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	pan-essential (no counts in all conditions) - not analyzed
