LICENSE
README.md
pyproject.toml
src/prosig/__init__.py
src/prosig/__main__.py
src/prosig/sequences.py
src/prosig.egg-info/PKG-INFO
src/prosig.egg-info/SOURCES.txt
src/prosig.egg-info/dependency_links.txt
src/prosig.egg-info/entry_points.txt
src/prosig.egg-info/requires.txt
src/prosig.egg-info/top_level.txt
src/prosig/cli/__init__.py
src/prosig/cli/app.py
src/prosig/cli/build_library.py
src/prosig/cli/inspect.py
src/prosig/cli/logging.py
src/prosig/cli/scan.py
src/prosig/cli/setup_data.py
src/prosig/data/__init__.py
src/prosig/data/cluster_config.yaml.template
src/prosig/data/role_map.yaml.template
src/prosig/go/__init__.py
src/prosig/go/build.py
src/prosig/go/clustering.py
src/prosig/go/describe.py
src/prosig/go/similarity.py
src/prosig/io/__init__.py
src/prosig/io/download.py
src/prosig/io/freshness.py
src/prosig/library/__init__.py
src/prosig/library/default/__init__.py
src/prosig/library/default/accession_mf_go.tsv
src/prosig/library/default/clusters_meta.tsv
src/prosig/library/default/go_graph.pkl
src/prosig/library/default/motif_cluster_scoreboard.pkl
src/prosig/library/default/motif_cluster_scoreboard_meta.json
src/prosig/library/default/prosig_motifs.tsv
src/prosig/motifs/__init__.py
src/prosig/motifs/prosite.py
src/prosig/motifs/scanning.py
src/prosig/prediction/__init__.py
src/prosig/prediction/motif_scoreboard.py
tests/test_build_library.py
tests/test_cli.py
tests/test_download.py
tests/test_freshness.py
tests/test_go_clustering.py
tests/test_go_similarity.py
tests/test_inspect_cli.py
tests/test_library.py
tests/test_motif_scoreboard.py
tests/test_motifs_prosite.py
tests/test_motifs_scanning.py
tests/test_sequences.py
tests/test_setup_data.py