@unpublished{shih_cufinufft_2021,
  title        = {{{cuFINUFFT}}: A Load-Balanced {{GPU}} Library for General-Purpose Nonuniform {{FFTs}}},
  shorttitle   = {{cuFINUFFT}},
  author       = {Shih, Yu-hsuan and Wright, Garrett and Andén, Joakim and Blaschke, Johannes and Barnett, Alex H.},
  url          = {http://arxiv.org/abs/2102.08463},
  urldate      = {2021-12-10},
  date         = {2021-03-25},
  eprint       = {2102.08463},
  doi          = {10.48550/arXiv.2102.08463},
  eprinttype   = {arXiv},
  eprintclass  = {cs, eess, math},
  langid       = {english}
}

@misc{barnett_aliasing_2020,
      title={Aliasing error of the exp$(\beta \sqrt{1-z^2})$ kernel in the nonuniform fast Fourier transform}, 
      author={A. H. Barnett},
      year={2020},
      eprint={2001.09405},
      archivePrefix={arXiv},
      primaryClass={math.NA},
      doi={10.48550/arXiv.2001.09405},
      url={https://arxiv.org/abs/2001.09405}, 
}
@misc{barnett_nufft_2019,
      title={A parallel non-uniform fast Fourier transform library based on an "exponential of semicircle" kernel}, 
      author={Alex H. Barnett and Jeremy F. Magland and Ludvig af Klinteberg},
      year={2019},
      eprint={1808.06736},
      archivePrefix={arXiv},
      primaryClass={math.NA},
      doi={10.48550/arXiv.1808.06736},
      url={https://arxiv.org/abs/1808.06736}, 
}

@inproceedings{uecker_berkley_2015,
  title        = {Berkley Advanced Reconstruction Toolbox},
  shorttitle   = {Mrirecon/Bart},
  author       = {Uecker, Martin and Ong, Frank and Tamir, J},
  booktitle    = {Proc. {{Intl}}. {{Soc}}. {{Mag}}. {{Reson}}. {{Med}}. 23},
  location     = {Toronto},
  url          = {https://zenodo.org/records/10277939},
  doi          = {10.5281/zenodo.592960},
  urldate      = {2023-12-19},
  date         = 2015
}
@inproceedings{ong_frank_sigpy_2019,
  title        = {{{SigPy}}: {{A Python Package}} for {{High Performance Iterative Reconstruction}}},
  author       = {{Ong Frank} and {Lustig Michael}},
  booktitle    = {{{ISMRM}} 2019},
  date         = 2019,
  eventtitle   = {{ISMRM}}
}
@article{sutton_fast_2003,
  title        = {Fast, Iterative Image Reconstruction for {{MRI}} in the Presence of Field Inhomogeneities},
  author       = {Sutton, B.P. and Noll, D.C. and Fessler, J.A.},
  volume       = 22,
  number       = 2,
  pages        = {178--188},
  doi          = {10.1109/TMI.2002.808360},
  issn         = {1558-254X},
  date         = {2003-02},
  journaltitle = {IEEE Transactions on Medical Imaging},
  eventtitle   = {{{IEEE Transactions}} on {{Medical Imaging}}}
}
@article{fessler_nonuniform_2003,
  title        = {Nonuniform Fast Fourier Transforms Using Min-Max Interpolation},
  author       = {Fessler, J.A. and Sutton, B.P.},
  volume       = 51,
  number       = 2,
  pages        = {560--574},
  doi          = {10.1109/tsp.2002.807005},
  issn         = {1053-587X},
  url          = {http://ieeexplore.ieee.org/document/1166689/},
  urldate      = {2021-05-03},
  date         = {2003-02},
  journaltitle = {IEEE Transactions on Signal Processing},
  shortjournal = {IEEE Trans. Signal Process.},
  langid       = {english}
}
@article{wang_efficient_2023,
  title        = {Efficient Approximation of {{Jacobian}} Matrices Involving a Non-Uniform Fast {{Fourier}} Transform ({{NUFFT}})},
  author       = {Wang, Guanhua and Fessler, Jeffrey A.},
  volume       = 9,
  pages        = {43--54},
  doi          = {10.1109/TCI.2023.3240081},
  issn         = {2333-9403, 2334-0118, 2573-0436},
  url          = {http://arxiv.org/abs/2111.02912},
  urldate      = {2024-04-11},
  date         = 2023,
  journaltitle = {IEEE Transactions on Computational Imaging},
  shortjournal = {IEEE Trans. Comput. Imaging},
  eprint       = {2111.02912},
  eprinttype   = {arXiv},
  eprintclass  = {eess},
  langid       = {english}
}
@inproceedings{knoll_gpunufft_2014,
  title        = {gpuNUFFT - An Open Source GPU Library for 3D Regridding with Direct Matlab Interface},
  author       = {Florian Knoll and Andreas Schwarzl and Clemens Diwoky and Daniel K. Sodickson},
  year         = 2014,
  url          = {https://api.semanticscholar.org/CorpusID:53652346}
}
@inproceedings{muckley_torchkbnufft_2020,
  title        = {{TorchKbNufft}: A High-Level, Hardware-Agnostic Non-Uniform Fast {Fourier} Transform},
  author       = {M. J. Muckley and R. Stern and T. Murrell and F. Knoll},
  year         = 2020,
  booktitle    = {ISMRM Workshop on Data Sampling \& Image Reconstruction},
  note         = {Source code available at https://github.com/mmuckley/torchkbnufft}
}
@misc{comby_snake-fmri_2024,
  title={SNAKE-fMRI: A modular fMRI data simulator from the space-time domain to k-space and back},
  author={Pierre-Antoine Comby and Alexandre Vignaud and Philippe Ciuciu},
  year={2024},
  eprint={2404.08282},
  archivePrefix={arXiv},
  primaryClass={eess.SP},
  url={https://arxiv.org/abs/2404.08282},
  doi={10.48550/arXiv.2404.08282}
}
@article{farrens_pysap_2020,
  title        = {{{PySAP}}: {{Python Sparse Data Analysis Package}} for Multidisciplinary Image Processing},
  shorttitle   = {{PySAP}},
  author       = {Farrens, S. and Grigis, A. and El Gueddari, L. and Ramzi, Z. and G.r., Chaithya and Starck, S. and Sarthou, B. and Cherkaoui, H. and Ciuciu, P. and Starck, J. -L.},
  volume       = 32,
  pages        = 100402,
  doi          = {10.1016/j.ascom.2020.100402},
  issn         = {2213-1337},
  url          = {https://www.sciencedirect.com/science/article/pii/S2213133720300561},
  urldate      = {2024-09-27},
  date         = {2020-07-01},
  journaltitle = {Astronomy and Computing},
  shortjournal = {Astronomy and Computing}
}
@software{tachella_deepinverse_2023,
  title        = {{{DeepInverse}}: {{A}} Deep Learning Framework for Inverse Problems in Imaging},
  shorttitle   = {{DeepInverse}},
  author       = {Tachella, Julian and Chen, Dongdong and Hurault, Samuel and Terris, Matthieu and Wang, Andrew},
  doi          = {10.5281/zenodo.7982256},
  url          = {https://github.com/deepinv/deepinv},
  urldate      = {2024-09-27},
  date         = {2023-06},
  version      = {latest}
}
@inproceedings{gueddari_pysap-mri_2020,
  title        = {{{PySAP-MRI}}: A Python Package for {{MR}} Image Reconstruction},
  author       = {Gueddari, Loubna and Gr, Chaithya and Ramzi, Zaccharie and Farrens, Samuel and Starck, Sophie and Grigis, Antoine and Starck, Jean-Luc and Ciuciu, Philippe},
  year         = 2020,
  url = {https://inria.hal.science/hal-02399267},
  booktitle    = {{{ISMRM}} Workshop on Data Sampling and Image Reconstruction}
}
