Metadata-Version: 2.4
Name: scdiffeq-analyses
Version: 0.0.2rc7
Summary: Notebooks, figures, files, and helper functions to reproduce the analyses presented in the scDiffEq manuscript.
Home-page: https://github.com/scDiffEq/scdiffeq-analyses
Author: Michael E. Vinyard
Author-email: mvinyard.ai@gmail.com
License: MIT
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Programming Language :: Python :: 3.9
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >3.9.0
Description-Content-Type: text/markdown
License-File: LICENSE
Dynamic: author
Dynamic: author-email
Dynamic: classifier
Dynamic: description
Dynamic: description-content-type
Dynamic: home-page
Dynamic: license
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# scDiffEq Analyses

Notebooks, figures, files, and helper functions to reproduce the analyses presented in the scDiffEq manuscript.

## Overview

```shell
scDiffEq/scdiffeq-analyses/
├── manuscript/
│   ├── figure_1/
│   ├── figure_2/
│   │   ├── figure_files/
│   │   ├── notebooks/
│   │   └── results/
│   ├── figure_3/
│   ...
│   ├── models/
│   └── supplementary_tables/
│
└── scdiffeq_analyses/
```

### Manuscript reproducibility

**Notebooks, scripts, and other code to reproduce and/or use**:
* Main figures
* Supplementary figures
* Supplementary tables
* Trained model checkpoints

### Code and helper functions

These are contained in `scdiffeq_analyses/`

### Installation

```bash
git clone https://github.com/scDiffEq/scdiffeq-analyses.git;
cd scdiffeq-analyses; pip install -e .
```

