Code	Name	DNA	RNA	Special	Degenerate	Matches	0	1	2	3
A	Adenine	TRUE	TRUE	FALSE	FALSE	A	1	0	0	0
C	Cytosine	TRUE	TRUE	FALSE	FALSE	C	0	1	0	0
G	Guanine	TRUE	TRUE	FALSE	FALSE	G	0	0	1	0
T	Thymine	TRUE	FALSE	FALSE	FALSE	T	0	0	0	1
W	Weak	TRUE	TRUE	FALSE	TRUE	A/T	1	0	0	1
S	Strong	TRUE	TRUE	FALSE	TRUE	C/G	0	1	1	0
M	Amino	TRUE	TRUE	FALSE	TRUE	A/C	1	1	0	0
K	Keto	TRUE	TRUE	FALSE	TRUE	G/T	0	0	1	1
R	Purine	TRUE	TRUE	FALSE	TRUE	A/G	1	0	1	0
Y	Pyrimidine	TRUE	TRUE	FALSE	TRUE	C/T	0	1	0	1
B	Not A	TRUE	TRUE	FALSE	TRUE	C/G/T	0	1	1	1
D	Not C	TRUE	TRUE	FALSE	TRUE	A/G/T	1	0	1	1
H	Not G	TRUE	TRUE	FALSE	TRUE	A/C/T	1	1	0	1
V	Not T	TRUE	TRUE	FALSE	TRUE	A/C/G	1	1	1	0
N	Any	TRUE	TRUE	FALSE	TRUE	A/C/G/T	1	1	1	1
U	Uracil	FALSE	TRUE	FALSE	FALSE	T	0	0	0	1
I	Inosine	FALSE	TRUE	TRUE	FALSE	G	0	0	1	0
.	Gap	TRUE	TRUE	TRUE	TRUE	./-	0	0	0	0
-	Gap	TRUE	TRUE	TRUE	TRUE	./-	0	0	0	0