Getting Started With
CellProfiler! |
CellProfiler is automated image analysis software
to measure biological phenotypes in images. |
See a pipeline in
action |
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Load an example pipeline, then click on the "Analyze
Images" button.
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Build your own
pipeline |
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1: Start |
Download a
pipeline template from our website of examples. Load it with
File > Import > Pipeline from File.... Run it,
then modify it to suit your assay.
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2: Adjust |
Use the Input modules to select and configure your images for
analysis. Add Analysis modules to identify image features,
make measurements and
export results.
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3: Test |
Click the "Start Test Mode" button to step through the pipeline
and check the module
settings on a few images.
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4: Analyze |
Click the "Analyze Images" button to process all of your
images with your pipeline.
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