.gitignore
ATLAS-fine-alignment.ipynb
ATLAS-ome-companion.ipynb
ATLAS-raw-import.ipynb
ATLAS-z-align.ipynb
LICENSE
README.md
create_wk_set_from_czi.py
environment.yml
pyproject.toml
.github/workflows/CI.yaml
.github/workflows/release.yml
atlas/__init__.py
atlas/alignment/__init__.py
atlas/alignment/backup.py
atlas/alignment/utils.py
atlas/image_analysis/__init__.py
atlas/image_analysis/utils.py
atlas/io/__init__.py
atlas/io/fibics_metadata.py
atlas/io/utils.py
atlas/misc/__init__.py
atlas/stitching/__init__.py
atlas_cci_align.egg-info/PKG-INFO
atlas_cci_align.egg-info/SOURCES.txt
atlas_cci_align.egg-info/dependency_links.txt
atlas_cci_align.egg-info/requires.txt
atlas_cci_align.egg-info/scm_file_list.json
atlas_cci_align.egg-info/scm_version.json
atlas_cci_align.egg-info/top_level.txt
tests/test_imports.py