LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
TMEImmune/ISAFN.py
TMEImmune/ISTME.py
TMEImmune/SIAscore.py
TMEImmune/TME_score.py
TMEImmune/__init__.py
TMEImmune/benchmark.py
TMEImmune/data_processing.py
TMEImmune/estimateScore.py
TMEImmune/gene_id.py
TMEImmune/isafn_models.py
TMEImmune/nb_utilities.py
TMEImmune/netbio.py
TMEImmune/optimal.py
TMEImmune/parallel.py
TMEImmune.egg-info/PKG-INFO
TMEImmune.egg-info/SOURCES.txt
TMEImmune.egg-info/dependency_links.txt
TMEImmune.egg-info/requires.txt
TMEImmune.egg-info/top_level.txt
TMEImmune/data/c2.all.v7.2.symbols.gmt
TMEImmune/data/gene_annotation.npz
TMEImmune/data/gene_sets_full.json
TMEImmune/data/Gide/gide_training.npz
TMEImmune/data/isafn/cohort_minmax_global.json
TMEImmune/data/isafn/features_output.json
TMEImmune/data/isafn/fusion_models_final.pkl
TMEImmune/data/nb_biomarker/CTLA4.txt
TMEImmune/data/nb_biomarker/PD-L1.txt
TMEImmune/data/nb_biomarker/PD1.txt
TMEImmune/data/nb_biomarker/PD1_CTLA4.txt
TMEImmune/data/nb_biomarker/PD1_PD-L1_CTLA4.txt
TMEImmune/data/nb_biomarker/README.txt
tests/test_cohorts.py
tests/test_confirm.py
tests/test_efficiency.py
tests/test_evaluation.py
tests/test_gene_id.py
tests/test_harmonize.py
tests/test_isafn.py
tests/test_parallel.py