Agent / assistant quick-start
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After installation, nothing in your workspace explains autosaxs by default. Use this CLI to
pull the bundled reference material and defaults into files you can read.

autosaxs runs from the SAME Python environment where the package was installed: prefer
  /path/to/env/bin/autosaxs ...
when PATH might point at a different interpreter.

Shipped commands (no input data required)
-----------------------------------------
  get-docs -o <dir>            Write README.md (short) and autosaxs-docs/skills_reference.md (detailed skills).
  get-skills -o <dir>          Replace dir/saxs-processing/ entirely (orchestrator SKILL.md + <name>/<name>.md leaves).
  get-default-config -o <dir>  Copy bundled config_base.conf into <dir> (skill-keyed YAML template for overrides).

Suggested first steps for an agent
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  1. autosaxs get-docs -o .
  2. autosaxs get-default-config -o .   (optional: edit config_base.conf, pass --conf to skills)
  3. autosaxs get-skills -o .          (optional, for Cursor-style skills)
  4. autosaxs <subcommand> --help       processing skills: calibrate, integrate, subtract, ...

Every processing subcommand also accepts --description (full docstring, no args required).
