# Generated by Cargo
# will have compiled files and executables
debug
target

# These are backup files generated by rustfmt
**/*.rs.bk

# MSVC Windows builds of rustc generate these, which store debugging information
*.pdb

# Generated by cargo mutants
# Contains mutation testing data
**/mutants.out*/

# RustRover
#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
#  and can be added to the global gitignore or merged into this file.  For a more nuclear
#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
#.idea/

src/commands/wps_peaks/snyder_code.md

src/commands/gc_bias/window_streaming_logic.md

src/commands/prepare_windows/test_to_make.md

.DS_Store

website/docs/generated/

__pycache__/
.pytest_cache/
.venv/
build/
dist/
*.egg-info/

test_scores.md

add_verification_comment.py

plans_and_specs/lionheart-main/
.gwf/

other_software/

downstream_tests/tmp/
.Rproj.user
cfdnalab.Rcheck/