.gitignore
README.md
pyproject.toml
requirements.txt
train.py
./train.py
./builders/autoencoder.py
./builders/conditional_diffusion.py
./builders/diffusion.py
./builders/latent_diffusion.py
./model/__init__.py
./model/autoencoder.py
./model/decoder.py
./model/encoder.py
./model/graphics.py
./model/metrics.py
./model/mix.py
./model/ophiuchus.py
./model/utils.py
./notebooks/graphics.py
./notebooks/utils.py
./scripts/encode.py
./scripts/encode_all_levels.py
.github/workflows/release.yml
builders/autoencoder.py
builders/conditional_diffusion.py
builders/diffusion.py
builders/latent_diffusion.py
configs/autoencoder.yml
configs/latent_diffusion.yml
figures/SAMEhourglass.svg
figures/VALIDhourglass.svg
figures/gif.gif
model/__init__.py
model/autoencoder.py
model/decoder.py
model/encoder.py
model/graphics.py
model/metrics.py
model/mix.py
model/ophiuchus.py
model/utils.py
notebooks/eval_samples.sh
notebooks/fold3d_preprocess.ipynb
notebooks/graphics.py
notebooks/utils.py
notebooks/prototype/action_matching.ipynb
notebooks/prototype/diffusion.ipynb
notebooks/prototype/evaluate.ipynb
notebooks/prototype/invert_spherical_harmonics.ipynb
notebooks/prototype/invert_v2.ipynb
notebooks/prototype/stochastic_interpolants.ipynb
notebooks/prototype/tyrosine.ipynb
notebooks/utils/autoencode.ipynb
notebooks/utils/cluster.ipynb
notebooks/utils/dynamics_simulation.ipynb
notebooks/utils/manifold.ipynb
notebooks/utils/sample.ipynb
ophiuchus.egg-info/PKG-INFO
ophiuchus.egg-info/SOURCES.txt
ophiuchus.egg-info/dependency_links.txt
ophiuchus.egg-info/requires.txt
ophiuchus.egg-info/top_level.txt
scripts/encode.py
scripts/encode_all_levels.py