LICENSE
README.md
pyproject.toml
src/semantiseq/__init__.py
src/semantiseq/__main__.py
src/semantiseq/alignment.py
src/semantiseq/artifacts.py
src/semantiseq/baseline.py
src/semantiseq/batch.py
src/semantiseq/batch_report.py
src/semantiseq/cache.py
src/semantiseq/cli.py
src/semantiseq/compare.py
src/semantiseq/details.py
src/semantiseq/diagnostics.py
src/semantiseq/difference_table.py
src/semantiseq/fingerprint.py
src/semantiseq/identity.py
src/semantiseq/manifest.py
src/semantiseq/matrix.py
src/semantiseq/metrics.py
src/semantiseq/model.py
src/semantiseq/multiqc.py
src/semantiseq/multiqc_config.py
src/semantiseq/policy.py
src/semantiseq/profiles.py
src/semantiseq/progress.py
src/semantiseq/provenance.py
src/semantiseq/regions.py
src/semantiseq/report.py
src/semantiseq/tracks.py
src/semantiseq/variant.py
src/semantiseq.egg-info/PKG-INFO
src/semantiseq.egg-info/SOURCES.txt
src/semantiseq.egg-info/dependency_links.txt
src/semantiseq.egg-info/entry_points.txt
src/semantiseq.egg-info/requires.txt
src/semantiseq.egg-info/top_level.txt
tests/test_alignment.py
tests/test_artifacts.py
tests/test_batch.py
tests/test_cli.py
tests/test_fingerprint.py
tests/test_variant.py
tests/test_workflows.py