LICENSE
README.md
pyproject.toml
RepLikCompare/__init__.py
RepLikCompare/analysis.py
RepLikCompare/dataset.py
RepLikCompare.egg-info/PKG-INFO
RepLikCompare.egg-info/SOURCES.txt
RepLikCompare.egg-info/dependency_links.txt
RepLikCompare.egg-info/requires.txt
RepLikCompare.egg-info/top_level.txt
RepLikCompare/EnsembleComparison/compute_convergence.py
RepLikCompare/EnsembleComparison/compute_jsd.py
RepLikCompare/EnsembleComparison/compute_wasserstein.py
RepLikCompare/clustering/__init__.py
RepLikCompare/clustering/_labels.py
RepLikCompare/clustering/assign_cluster_representative.py
RepLikCompare/clustering/compute_cluster_GMM.py
RepLikCompare/clustering/compute_cluster_dbscan.py
RepLikCompare/clustering/compute_cluster_hdbscan.py
RepLikCompare/clustering/compute_cluster_kmean.py
RepLikCompare/clustering/hierarchical_clustering.py
RepLikCompare/dimensionality_reduction/__init__.py
RepLikCompare/dimensionality_reduction/compute_kpca.py
RepLikCompare/dimensionality_reduction/compute_pca.py
RepLikCompare/dimensionality_reduction/compute_tsne.py
RepLikCompare/dimensionality_reduction/compute_umap.py
RepLikCompare/plotting/__init__.py
RepLikCompare/plotting/_shading.py
RepLikCompare/plotting/compute_secondary_structure_timeline.py
RepLikCompare/plotting/plot_cluster_timeline.py
RepLikCompare/plotting/plot_contact_map.py
RepLikCompare/plotting/plot_distri_norm.py
RepLikCompare/plotting/plot_free_energy.py
RepLikCompare/plotting/plot_lineplot_avg.py
RepLikCompare/plotting/plot_rmsd.py
RepLikCompare/plotting/plot_rmsf.py
RepLikCompare/plotting/plot_scatter.py
RepLikCompare/plotting/plot_vonmises.py
tests/test_clustering.py
tests/test_dataset.py
tests/test_dimensionality_reduction.py
tests/test_ensemble_comparison.py
tests/test_plotting.py