.gitignore
.readthedocs.yml
CHANGELOG
LICENSE
MANIFEST.in
README.rst
pyproject.toml
docs/README.md
docs/conf.py
docs/fitting_geometry.png
docs/fitting_geometry.svg
docs/index.rst
docs/nanite.bib
docs/requirements.txt
docs/sec_changelog.rst
docs/sec_cli.rst
docs/sec_code_reference.rst
docs/sec_develop.rst
docs/sec_examples.rst
docs/sec_fitting_guide.rst
docs/sec_getting_started.rst
docs/sec_rating_workflow.rst
docs/sec_z_bib.rst
docs/data/force-save-example.jpk-force
docs/extensions/fancy_include.py
docs/extensions/github_changelog.py
docs/extensions/nanite_models.py
docs/extensions/nanite_preprocs.py
docs/extensions/simple_argparse.py
docs/img/nanite-fit-example.png
docs/img/nanite-rate-example.png
examples/fit_and_rate.png
examples/fit_and_rate.py
examples/generate_example_images.py
examples/model_spherical_indenter.png
examples/model_spherical_indenter.py
examples/data/zebrafish-head-section-gray-matter.jpk-force
src/nanite/__init__.py
src/nanite/_version.py
src/nanite/fit.py
src/nanite/group.py
src/nanite/indent.py
src/nanite/poc.py
src/nanite/preproc.py
src/nanite/qmap.py
src/nanite/read.py
src/nanite/smooth.py
src/nanite.egg-info/PKG-INFO
src/nanite.egg-info/SOURCES.txt
src/nanite.egg-info/dependency_links.txt
src/nanite.egg-info/entry_points.txt
src/nanite.egg-info/requires.txt
src/nanite.egg-info/top_level.txt
src/nanite/cli/__init__.py
src/nanite/cli/plotting.py
src/nanite/cli/profile.py
src/nanite/cli/rating.py
src/nanite/model/__init__.py
src/nanite/model/core.py
src/nanite/model/logic.py
src/nanite/model/model_conical_indenter.py
src/nanite/model/model_hertz_paraboloidal.py
src/nanite/model/model_hertz_three_sided_pyramid.py
src/nanite/model/model_power_layer_clifford_2009.py
src/nanite/model/model_sneddon_spherical_approximation.py
src/nanite/model/residuals.py
src/nanite/model/weight.py
src/nanite/rate/__init__.py
src/nanite/rate/features.py
src/nanite/rate/io.py
src/nanite/rate/rater.py
src/nanite/rate/regressors.py
src/nanite/rate/ts_zef18/train_feat_bin_apr_spikes_count.txt
src/nanite/rate/ts_zef18/train_feat_bin_cp_position.txt
src/nanite/rate/ts_zef18/train_feat_bin_size.txt
src/nanite/rate/ts_zef18/train_feat_con_apr_flatness.txt
src/nanite/rate/ts_zef18/train_feat_con_apr_size.txt
src/nanite/rate/ts_zef18/train_feat_con_apr_sum.txt
src/nanite/rate/ts_zef18/train_feat_con_bln_slope.txt
src/nanite/rate/ts_zef18/train_feat_con_bln_variation.txt
src/nanite/rate/ts_zef18/train_feat_con_cp_curvature.txt
src/nanite/rate/ts_zef18/train_feat_con_cp_magnitude.txt
src/nanite/rate/ts_zef18/train_feat_con_idt_maxima_75perc.txt
src/nanite/rate/ts_zef18/train_feat_con_idt_monotony.txt
src/nanite/rate/ts_zef18/train_feat_con_idt_spike_area.txt
src/nanite/rate/ts_zef18/train_feat_con_idt_sum.txt
src/nanite/rate/ts_zef18/train_feat_con_idt_sum_75perc.txt
src/nanite/rate/ts_zef18/train_response.txt
tests/common.py
tests/conftest.py
tests/requirements.txt
tests/test_cli_plotting.py
tests/test_cli_profile.py
tests/test_cli_rating.py
tests/test_fit_ancillary.py
tests/test_fit_base.py
tests/test_fit_emodulus_search.py
tests/test_fit_hash.py
tests/test_fit_properties.py
tests/test_group.py
tests/test_indent.py
tests/test_indent2.py
tests/test_model.py
tests/test_model_core.py
tests/test_model_expr.py
tests/test_model_hertz_cone.py
tests/test_model_hertz_parabol.py
tests/test_model_hertz_pyramid_three.py
tests/test_model_logic.py
tests/test_model_power_layer_clifford_2009.py
tests/test_model_sneddon_spherical.py
tests/test_model_sneddon_spherical_approximation.py
tests/test_model_style.py
tests/test_open_jpk_variation.py
tests/test_poc.py
tests/test_preproc.py
tests/test_qmap.py
tests/test_rate_features.py
tests/test_rate_io.py
tests/test_rate_training_set.py
tests/test_read.py
tests/test_smooth.py
tests/data/cli-profile-1.7.8.cfg
tests/data/cli-profile-2.1.0.cfg
tests/data/fmt-afm-workshop-fd_single_2021-10-22_14.16.csv
tests/data/fmt-jpk-cl_calibration_force-save-2015-02-04.jpk-force
tests/data/fmt-jpk-fd_flipsign_2015.05.22-15.31.49.352.jpk-force
tests/data/fmt-jpk-fd_map-data-reference-points.jpk-force-map
tests/data/fmt-jpk-fd_map0d_extracted.jpk-force-map
tests/data/fmt-jpk-fd_map1d_2016-11-07.jpk-force-map
tests/data/fmt-jpk-fd_map2x2_extracted.jpk-force-map
tests/data/fmt-jpk-fd_map_bad_2013-05-27_1.jpk-force-map
tests/data/fmt-jpk-fd_map_bad_2013-05-27_2.jpk-force-map
tests/data/fmt-jpk-fd_single_bad_2017-01-16_1.jpk-force
tests/data/fmt-jpk-fd_single_bad_2017-01-16_2.jpk-force
tests/data/fmt-jpk-fd_single_bad_2017-01-16_3.jpk-force
tests/data/fmt-jpk-fd_single_bad_2017-01-16_4.jpk-force
tests/data/fmt-jpk-fd_single_bad_2017-01-16_5.jpk-force
tests/data/fmt-jpk-fd_single_bad_GWAT_2017-10-17.jpk-force
tests/data/fmt-jpk-fd_single_bad_bead10_2017-04-27.jpk-force
tests/data/fmt-jpk-fd_single_bad_bead46_2017-04-20.jpk-force
tests/data/fmt-jpk-fd_single_bad_bead7_2017-04-27.jpk-force
tests/data/fmt-jpk-fd_single_tilted-baseline-drift-mitotic_2021-01-29.jpk-force
tests/data/fmt-jpk-fd_single_tilted-baseline-shift-adyp_2023-06-26.jpk-force
tests/data/fmt-jpk-fd_spot3-0192.jpk-force
tests/data/model_external_basic.py
tests/data/rate-export_1.7.8.h5