marimo[lsp,mcp,recommended,sql]>=0.23.1
mlflow[genai,mcp]>=3.16.1
optuna>=4.8.0
pina-mathlab>=0.2.6
transformers[accelerate,tiktoken]>=5.5.4
authlib>=1.6.9
pillow>=12.2.0
cryptography>=49.0.0
langgraph>=1.1.8
werkzeug>=3.1.8
sqlparse>=0.6.0
diskcache>=5.6.3
protobuf>=6.33.6
python-multipart>=0.0.27
ujson>=5.12.0
pyasn1>=0.6.3
pyjwt>=2.12.1
flask>=3.1.3
gitpython>=3.1.59
httpx2>=2.12.0
httpcore2>=2.10.0
lightning>=2.6.6
aiohttp>=3.14.3
accelerate>=1.15.0
pymdown-extensions>=11.0.1
optuna-integration[pytorch-lightning]>=4.8.0
plotly[express,kaleido]>=6.7.0
pydantic-ai-slim[ag-ui]>=2.10.0
pyyaml>=6.0.3
python-dotenv>=1.2.2
typer>=0.24.1
sympy>=1.14.0
meshio>=5.3.5
fasta2a>=0.6.1

[all]
torch>=2.11.0
torch-geometric>=2.7.0
