.dockerignore
.gitignore
.pre-commit-config.yaml
Dockerfile
LICENSE
README.md
mkdocs.yml
pyproject.toml
uv.lock
.github/dependabot.yml
.github/workflows/build-container.yml
.github/workflows/deploy-docs.yml
.github/workflows/pypi.yml
.github/workflows/python-tests.yml
TabNado.egg-info/PKG-INFO
TabNado.egg-info/SOURCES.txt
TabNado.egg-info/dependency_links.txt
TabNado.egg-info/entry_points.txt
TabNado.egg-info/requires.txt
TabNado.egg-info/top_level.txt
docs/cli.md
docs/configuration.md
docs/index.md
docs/installation.md
docs/outputs.md
docs/pipeline.md
docs/quick_start.md
docs/api/overview.md
docs/assets/tabnado.png
tabnado/__init__.py
tabnado/api.py
tabnado/cli.py
tabnado/data.py
tabnado/evaluate.py
tabnado/gandalf_shap.py
tabnado/gandalf_sweep.py
tabnado/gandalf_train.py
tabnado/init.py
tabnado/params.py
tabnado/utils.py
tabnado/wandb.py
tabnado/xgb_shap.py
tabnado/xgb_sweep.py
tabnado/xgb_train.py
tests/__init__.py
tests/conftest.py
tests/make_test_dataset.py
tests/test_cli.py
tests/test_peaks.py
tests/test_pipeline_gandalf.py
tests/test_pipeline_xgboost.py
tests/test_wandb_config.py
tests/data/params_gandalf_test.yaml
tests/data/params_test.yaml
tests/data/params_test_xgboost.yaml
tests/data/test_anno.gtf
tests/data/test_peaks.bed