.gitattributes
.gitignore
CITATION.cff
LICENSE
MANIFEST.in
README.md
pyproject.toml
.github/workflows/docker-image-zarr-to-tiff.yml
.github/workflows/python-package.yml
.github/workflows/python-publish.yml
.github/workflows/sphinx.yml
biomero/__init__.py
biomero/constants.py
biomero/database.py
biomero/eventsourcing.py
biomero/slurm_client.py
biomero/views.py
biomero.egg-info/PKG-INFO
biomero.egg-info/SOURCES.txt
biomero.egg-info/dependency_links.txt
biomero.egg-info/requires.txt
biomero.egg-info/top_level.txt
docs/Makefile
docs/biomero.rst
docs/conf.py
docs/index.rst
docs/make.bat
docs/modules.rst
docs/readme_link.md
docs/requirements.txt
docs/slurm-configuration.rst
docs/tutorial_link.md
docs/developer/eventsourcing.rst
resources/__init__.py
resources/convert_job_array.sh
resources/convert_zarr_to_tiff.def
resources/convert_zarr_to_tiff.dockerfile
resources/convert_zarr_to_tiff.py
resources/example.config
resources/job_template.sh
resources/pull_images.sh
resources/slurm-config.ini
resources/tutorials/tutorial_Azure_slurm.md
resources/tutorials/tutorial_GoogleCloud_slurm.md
resources/tutorials/tutorial_cellexpansion.md
resources/tutorials/tutorial_cellprofiler.md
resources/tutorials/tutorial_local_slurm.md
resources/tutorials/images/Cells.tif
resources/tutorials/images/cellexpansion.png
resources/tutorials/images/gc_allow_ssh.PNG
resources/tutorials/images/nuclei_labels.png
resources/tutorials/images/webclient_init_env.PNG
resources/tutorials/images/webclient_init_env_done.PNG
resources/tutorials/images/webclient_run_cellpose.PNG
resources/tutorials/images/webclient_run_workflow.PNG
tests/integration/__init__.py
tests/unit/__init__.py
tests/unit/test_eventsourcing.py
tests/unit/test_slurm_client.py