click>=8.0.0
loguru>=0.5.3
pyyaml>=6.0
pandas>=1.4.2
biopython>=1.80
datasets>=2.15
requests>=2.25
sentencepiece>=0.1.99
protobuf>=6.0
transformers>=4.34
torch>=2.1.2
pyrodigal-gv>=0.3.1
pyarrow>=14.0.0
alive-progress>=3.0.1
numpy<2,>=1.20
pycirclize>=0.3.1
h5py>=3.5
tqdm>=4.35.0

[exe]
setuptools
wheel
build

[lint]
isort
black

[test]
pytest>=6.2.5
pytest-cov>=3.0.0
