Reads Mapped to Any VDJ Gene : reads Mapped to any germline VDJ gene segments.
Reads with CDR3 : reads with CDR3 sequence.
Reads with Correct CDR3 : some reads with CDR3 might have stop codon and these reads are classified as incorrect.
Reads Mapped Confidently to VDJ Gene : reads mapped to VDJ gene and with correct CDR3.
Reads Mapped to TRA : reads mapped confidently to TRA chain.
Reads Mapped to TRB : reads mapped confidently to TRB chain.