mriqc package

Submodules

mriqc.run_mriqc module

MRIQC

mriqc.run_mriqc.main()[source]

Entry point

Module contents

The mriqc package provides a series of NR, IQMs to used in QAPs for MRI.

Dependencies

Make sure you have FSL and AFNI installed, and the binaries available in the system’s $PATH.

Installation

The easiest path is using pypi

pip install mriqc

Example

mriqc -i ~/Data/bids_dataset -o out/ -w work/