LICENSE
pyproject.toml
readme.md
itkit/__init__.py
itkit.egg-info/PKG-INFO
itkit.egg-info/SOURCES.txt
itkit.egg-info/dependency_links.txt
itkit.egg-info/entry_points.txt
itkit.egg-info/requires.txt
itkit.egg-info/top_level.txt
itkit/criterions/__init__.py
itkit/criterions/segment.py
itkit/dataset/__init__.py
itkit/dataset/base.py
itkit/dataset/base_convert.py
itkit/dataset/AbdomenCT_1K/__init__.py
itkit/dataset/AbdomenCT_1K/convert_nii_mha.py
itkit/dataset/AbdomenCT_1K/meta.py
itkit/dataset/AbdomenCT_1K/mm_dataset.py
itkit/dataset/AbdomenCT_1K/precrop_npz.py
itkit/dataset/BraTs2024/convert_nii_mha.py
itkit/dataset/BraTs2024/meta.py
itkit/dataset/BraTs2024/mm_dataset.py
itkit/dataset/BraTs2024/precrop_npz.py
itkit/dataset/CTSpine1K/__init__.py
itkit/dataset/CTSpine1K/convert_nii_mha.py
itkit/dataset/CTSpine1K/convert_to_mha.py
itkit/dataset/CTSpine1K/meta.py
itkit/dataset/CTSpine1K/mm_dataset.py
itkit/dataset/CT_ORG/convert_nii_mha.py
itkit/dataset/CT_ORG/meta.py
itkit/dataset/CT_ORG/mm_dataset.py
itkit/dataset/CT_ORG/precrop_npz.py
itkit/dataset/FLARE_2022/convert_nii_mha.py
itkit/dataset/FLARE_2022/meta.py
itkit/dataset/FLARE_2022/mm_dataset.py
itkit/dataset/FLARE_2022/precrop_npz.py
itkit/dataset/FLARE_2023/__init__.py
itkit/dataset/FLARE_2023/convert_nii_mha.py
itkit/dataset/FLARE_2023/meta.py
itkit/dataset/FLARE_2023/mm_dataset.py
itkit/dataset/FLARE_2023/precrop_npz.py
itkit/dataset/GeneralDataset/convert_to_mha.py
itkit/dataset/GeneralDataset/mm_dataset.py
itkit/dataset/GeneralDataset/precrop_npz.py
itkit/dataset/ImageTBAD/__init__.py
itkit/dataset/ImageTBAD/convert_nii_mha.py
itkit/dataset/ImageTBAD/meta.py
itkit/dataset/ImageTBAD/mm_dataset.py
itkit/dataset/ImageTBAD/precrop_npz.py
itkit/dataset/KiTS23/__init__.py
itkit/dataset/KiTS23/convert_nii_mha.py
itkit/dataset/KiTS23/meta.py
itkit/dataset/KiTS23/mm_dataset.py
itkit/dataset/KiTS23/precrop_npz.py
itkit/dataset/LUNA16/convert_mhd_mha.py
itkit/dataset/LUNA16/meta.py
itkit/dataset/LUNA16/mm_dataset.py
itkit/dataset/LUNA16/precrop_npz.py
itkit/dataset/SA_Med2D/DataProvider.py
itkit/dataset/SA_Med2D/DatasetBackend.py
itkit/dataset/SA_Med2D/DatasetInitialize.py
itkit/dataset/SA_Med2D/__init__.py
itkit/dataset/TCGA_Dataset/convert_to_mha.py
itkit/dataset/TCGA_Dataset/precrop_npz.py
itkit/dataset/Totalsegmentator/AnalyzeClasses.py
itkit/dataset/Totalsegmentator/AnalyzeHUDistribution.py
itkit/dataset/Totalsegmentator/ClassRemap.py
itkit/dataset/Totalsegmentator/__init__.py
itkit/dataset/Totalsegmentator/convert_nii_mha.py
itkit/dataset/Totalsegmentator/fix_ITKUnreadable_files.py
itkit/dataset/Totalsegmentator/meta.py
itkit/dataset/Totalsegmentator/mm_dataset.py
itkit/dataset/Totalsegmentator/parse_label_overlap.py
itkit/dataset/Totalsegmentator/precrop_npz.py
itkit/gui/ItkTabs.py
itkit/gui/__init__.py
itkit/gui/app.py
itkit/gui/runner.py
itkit/io/VallinaIO_DcmMha.py
itkit/io/__init__.py
itkit/io/dcm_toolkit.py
itkit/io/nii_toolkit.py
itkit/io/sitk_toolkit.py
itkit/lightning/callback/__init__.py
itkit/lightning/callback/visualization.py
itkit/lightning/dataset/__init__.py
itkit/lightning/dataset/base.py
itkit/lightning/dataset/radiology.py
itkit/lightning/logger/__init__.py
itkit/lightning/logger/fig.py
itkit/lightning/logger/tabulate.py
itkit/lightning/logger/tensorboard.py
itkit/lightning/pipeline/__init__.py
itkit/lightning/pipeline/augment.py
itkit/lightning/pipeline/base.py
itkit/lightning/pipeline/load.py
itkit/lightning/pipeline/radiology.py
itkit/lightning/pipeline/utils.py
itkit/lightning/task/__init__.py
itkit/lightning/task/segment.py
itkit/lightning/utils/__init__.py
itkit/lightning/utils/collate.py
itkit/lightning/utils/progress_bar.py
itkit/mm/TestConclude.py
itkit/mm/__init__.py
itkit/mm/experiment.py
itkit/mm/inference.py
itkit/mm/mgam_models.py
itkit/mm/mmeng_PlugIn.py
itkit/mm/mmseg_Dev3D.py
itkit/mm/mmseg_PlugIn.py
itkit/mm/run.py
itkit/mm/visualization.py
itkit/models/DSNet.py
itkit/models/EGE_UNet.py
itkit/models/EfficientFormer.py
itkit/models/EfficientNet.py
itkit/models/FastSlow.py
itkit/models/MedNeXt.py
itkit/models/MoCo.py
itkit/models/ReconSelfSup.py
itkit/models/SMP_Segformer.py
itkit/models/SegMamba.py
itkit/models/SelfSup.py
itkit/models/UNETR.py
itkit/models/UNet3Plus.py
itkit/models/__init__.py
itkit/models/base_timm.py
itkit/models/losses.py
itkit/models/utils.py
itkit/models/DA_TransUnet/DATransUNet.py
itkit/models/DA_TransUnet/__init__.py
itkit/models/DA_TransUnet/block.py
itkit/models/DA_TransUnet/configs.py
itkit/models/DconnNet/DconnNet.py
itkit/models/DconnNet/__init__.py
itkit/models/DconnNet/attention.py
itkit/models/DconnNet/gap.py
itkit/models/DconnNet/resnet.py
itkit/models/LM_Net/FrequencyDomain.py
itkit/models/LM_Net/LM_Net.py
itkit/models/LM_Net/SoftPool.py
itkit/models/LM_Net/__init__.py
itkit/models/LM_Net/acb.py
itkit/models/LM_Net/blur_pool.py
itkit/models/LM_Net/depthwise_conv2d_implicit_gemm.py
itkit/models/LM_Net/involution_cuda.py
itkit/models/LM_Net/involution_naive.py
itkit/models/LM_Net/modules.py
itkit/models/LM_Net/nattencuda.py
itkit/models/LM_Net/nattentorch.py
itkit/models/LM_Net/nonlocal_block.py
itkit/models/LM_Net/padding.py
itkit/models/LM_Net/resnet.py
itkit/models/LM_Net/unet.py
itkit/models/SegFormer3D/Remastered.py
itkit/models/SegFormer3D/SegFormer3D.py
itkit/models/SegFormer3D/__init__.py
itkit/models/SegFormer3D/mm.py
itkit/models/SwinUMamba/SwinUMamba.py
itkit/models/SwinUMamba/__init__.py
itkit/models/SwinUMamba/mm.py
itkit/models/VMamba/__init__.py
itkit/models/VMamba/volume_mamba.py
itkit/models/mednext/MedNextV1.py
itkit/models/mednext/__init__.py
itkit/models/mednext/blocks.py
itkit/process/GeneralPreProcess.py
itkit/process/LoadBiomedicalData.py
itkit/process/NDArray.py
itkit/process/Stretch.py
itkit/process/__init__.py
itkit/process/base_processor.py
itkit/process/itk_aug.py
itkit/process/itk_check.py
itkit/process/itk_extract.py
itkit/process/itk_orient.py
itkit/process/itk_patch.py
itkit/process/itk_resample.py
itkit/process/meta_json.py
itkit/utils/CalcLabelDifference.py
itkit/utils/DevelopUtils.py
itkit/utils/DeviceSide.py
itkit/utils/OpticalFlowVisualization.py
itkit/utils/ResampleMha.py
itkit/utils/SlideAvg.py
itkit/utils/__init__.py
itkit/utils/ckptclean.py
itkit/utils/itemize.py
itkit/utils/search_tool.py
itkit/utils/statistics.py
itkit/utils/tcia_download.py
tests/test_gui_entry_subprocess.py
tests/test_gui_launch.py
tests/test_mmrun.py
tests/test_process_mains.py