gmlst/__init__.py,sha256=GSgaEvOEF-pp68ldWI9qdfHw7JKdcfDwBCjUzL9BZDc,104
gmlst/__main__.py,sha256=nNGWR7uSDtOxxQCeSdvWeKCSzrf0tTXopgJng0m73w0,110
gmlst/cli.py,sha256=1jDL_0VaUXcMApRC6wnefyDGc2v2grAKbO7jNACDpAw,1360
gmlst/core_config.py,sha256=0qhuv_cuI5s27xiJrNJ1tTJfaBwPfpMCxSdTpWhXGQc,5366
gmlst/fasta_io.py,sha256=fQ4So-YNhQ8NpC8j5W5l38sAnLfcPZEMf_g6GcxyjlI,1422
gmlst/kmer_prefilter.py,sha256=xVXjKYHz88SGRHQo6ClF11ZjC3ZGMFj91fAujtfbRXA,2911
gmlst/metadata_io.py,sha256=-4xpQhjWzK0fUYAVpDTZC4EbsH0omHoe1qF8hvtbIbg,619
gmlst/utils.py,sha256=BerxH-BEQs6GHlEZ-ucO14Bk87_TKD0ag9ghIfUsKX8,5392
gmlst/aligners/__init__.py,sha256=RhBZTKEAnoedsheJuj24yqeRnBok6IUl9udkthcpDtU,1165
gmlst/aligners/base.py,sha256=aHjkXRHCmMER1A_Dj-IK2yfAHk-3R0cXPKeQXhn6AN0,5818
gmlst/aligners/blastn.py,sha256=rhapVGnyfCyorrixxNJIbQOWoVMrbAhq9PcsEHGjT60,9149
gmlst/aligners/kma.py,sha256=zxETjXBarM8MkDFsV_WFxJxR7qxx9LGvcg5549-SHxw,5310
gmlst/aligners/minimap2.py,sha256=mK7-IUxp_cnbPz3ythESISngo4HI4_2AMS37bIj81bU,43675
gmlst/aligners/nucmer.py,sha256=Ci5i1jw6VC95jqt0yxxt3rJ7VPWXDQjqg0SvnWvoxp4,7092
gmlst/calling/__init__.py,sha256=Uv4gLLOxHCOdqTIX01xl4YwZFJSg1ic4LZMJyG-fReM,266
gmlst/calling/allele.py,sha256=60E36R1vCgcVXe-MZSM9ZKkenU-_MRtfBDZ_ZZPeO98,5712
gmlst/calling/chew_policy.py,sha256=WpzcgFhtK-9wjISeV5yJApc09xNbLTNFeKOXey-o76M,8157
gmlst/calling/confidence.py,sha256=PfUBp_ubIYevnyVQYmNJ7iqkKM8Dpj3aLK7R3I8EMY8,1828
gmlst/calling/st_lookup.py,sha256=69CaVc5eFwZoJTUEyRUhkPqWsdBSLCceXEDdQasM7-8,6977
gmlst/commands/__init__.py,sha256=vUGOc8v-BtnK_7RwxrIcQ9BBEdTse4OM1f4Qx7tmqiQ,800
gmlst/commands/common.py,sha256=Z-BDXck8GqQnbXUMI7RNT38Y15_g2r1fKWJt-cjvBlw,3867
gmlst/commands/scheme.py,sha256=VVALxE_pMPOkgWhmy1KHtKSIR_iV1l97rhFRSMaGwwU,42423
gmlst/commands/typing.py,sha256=oVHhBcit8xH6pP6JeVD8o3BHNXIg5VJQ8fG_BRXCxOo,38356
gmlst/commands/typing_output.py,sha256=_BGQQHbicNrf5knkjEd4VLAS5NtxR3AeEk7-ak1dKuU,2109
gmlst/commands/typing_runner.py,sha256=_Od-L8Uwci7UPJULT8VPvQXy1V4qEPj1JBQkFc5IvJg,4508
gmlst/commands/typing_runtime.py,sha256=40agl6PjHP6_F_06DZ2gq3Qc0yHUFT7U2eLqlHrbGE0,1801
gmlst/commands/typing_scheme.py,sha256=3uBfcsTU1J4QNNUbTERVTEszubMus9Zet88e03Nq0rI,1924
gmlst/commands/utils.py,sha256=5M-vxKxgfhAa_9dmlLFUaXdgkxEzUnlPyE1Cjlg7rI4,32725
gmlst/core/__init__.py,sha256=9Fo7PI_uBwB_yMAQZdfUYq0twTcnUC44jSheK8LRawc,9275
gmlst/core/adapters_cds.py,sha256=Dc39Hxl9sgGWWLx-QuKG2POjoTOkQY-7HZxf0jyCCvY,1268
gmlst/core/adapters_exact_hash.py,sha256=_eBTW11bLuWlkO4-IAg4FsVJAMxStrO1hKJeKwj7vbs,4655
gmlst/core/adapters_index_prefilter.py,sha256=CBP0FFu03AsAMdnYib3-a4aoh1SuLE7IF3EVVzfVrIc,4463
gmlst/core/adapters_refinement.py,sha256=1vgmEjDb44lLhckMk8Ykmg-bWDOzBTEpSBEU4FrgdVA,8189
gmlst/core/cds.py,sha256=AKE8aHX5viovam2C8DkO9jDS82lZ1dyd_54lAY75XSs,3795
gmlst/core/config.py,sha256=tQhqaoKzZzE9hpCqKRMirBDkGJIl-6EBBgVdo-WJV48,2574
gmlst/core/exact_hash.py,sha256=m_e1zB7fxhc0cbbDDWSd923Ie2y0cKFF9isPi4yPVr0,13864
gmlst/core/indexing.py,sha256=4ENBgQ-Ks1Xh3qCxF1zLBVeVJrIngt8IrcGBMRW3QTE,6400
gmlst/core/pipeline.py,sha256=L_Z3fHryRw0IfidLf6CXTFbTBESEkQ-x56gIRqL5oV0,26765
gmlst/core/prefilter.py,sha256=bLLnCbG52S6llsTWtXlK7t0YoNkh0vlebpoLYN4h9oE,7802
gmlst/core/ranking.py,sha256=6vjKY0kIp_qurJpjvxL1SBBeB82MrzwFOxS-PB1OujE,1976
gmlst/core/refinement.py,sha256=ggLbPsrykJUzgdJ8-sF0_1ozl1oLkYVqA7NrSD7MBqo,18293
gmlst/core/sequences.py,sha256=tiEWA_MxCRQeV8eQYuMPIXj5jIGaj5sX00IWgxzt3cU,3326
gmlst/core/types.py,sha256=lpCxWRABcKwRO4KMKhuzB5aK7bDnSlbPwz3FHV22J6g,2518
gmlst/data/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
gmlst/data/blocked_schemes.json,sha256=yTrVkqkg-0ddg80Jylk3MBU2ZUo3kW-8cHKS6_71-Cs,191
gmlst/data/organism_mapping.json,sha256=05l_y707J_yIFzo8W1yKxWYWghsDZWHga8VNFrwyO5g,514
gmlst/data/catalogs/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
gmlst/data/catalogs/cgmlst.json,sha256=D757vW1oQGA3mWYR66TJWBZtuXmB4pDbNfq2Z1Edpx0,10185
gmlst/data/catalogs/enterobase.json,sha256=zZr0IxD9gD1h_hNNrO8jJ3DvO0fHQ1PIMz9fCpwdZ8M,6827
gmlst/data/catalogs/pasteur.json,sha256=6GeL3qgI9Shvho7j0LHrBDqBflaEdOs2mMAall91l9s,28098
gmlst/data/catalogs/pubmlst.json,sha256=xH2lGQID604dDqRzhiMG5tOaXzmZbNQlW9kCiyD5Iqs,98627
gmlst/database/__init__.py,sha256=XvPqc2T__j47tINQ_syzpwWBlpg_NLDFtx6tkPeK-uI,200
gmlst/database/atomic.py,sha256=x7CVndEClHdizQ4pY16aoOPZLsYzbiR8pSHIZ9hHRgA,505
gmlst/database/cache.py,sha256=5m9PGOB256Dn-xV1kITQS99-fAzEry0doZFSG0MeyyQ,21085
gmlst/database/download.py,sha256=gxJE4-5BaHnB15sLk1SV-lpvokdlDdW-BHpt3-h1NAo,16733
gmlst/database/schema.py,sha256=FftUYZLD9ECztTdAOz1quLKB7AIrjIWSZbVMSs-f8f0,5278
gmlst/database/providers/__init__.py,sha256=gOisM2pw3BuSUZ4Dc9tYIrPpoC9ToNzlQTAHXUSbJq4,1920
gmlst/database/providers/base.py,sha256=tvsrFaxKQGQvoHCraJV6r7VFH53zQf669ir1dYasqBs,3364
gmlst/database/providers/bigsdb.py,sha256=0Yl6J4_7uZd9uKYhhiyxziJpcaomb7qbhuJ86zL4ews,28057
gmlst/database/providers/cgmlst.py,sha256=NrqgELI8V0vusTXrJJKHCsUET01nznkGVXBtXnp8bQ0,9401
gmlst/database/providers/cgmlst_schemes.py,sha256=J-IuIt9eHsg2NtTGUMZDOlwCFiPwS61p9EFz44Wh6AE,8487
gmlst/database/providers/enterobase.py,sha256=iT-OvosT8rX8ofX7TWu4z6YSYxgRkWnNxA42UC2WJYw,18248
gmlst/novel/__init__.py,sha256=9BUoxiungSACIqMJXEFhLda4hHFviMRPqIX_SFsC9lA,331
gmlst/novel/reader.py,sha256=J5iMFVncfqmYgNn4KYSEbC1PB6A91s7oANP98HyExCM,5818
gmlst/novel/service.py,sha256=Zo5p1rqK9oir4ew3SAbUatdGZD_A-pSEd8aMXNmjJy4,5226
gmlst/novel/writer.py,sha256=QGSPUoMn_3vsgcvfuxRVl1oL_q-hAXNfsS2RI2K-fE8,7203
gmlst/readers/__init__.py,sha256=rwvDM270fMs5wB0lTlIKGO7D86_XETtFOlCpuBtmMSY,272
gmlst/readers/fasta.py,sha256=d9n72FyW4gRfjJtez3r-OWKe5EWe2jLNRSQWfHhila8,2053
gmlst/readers/fastq.py,sha256=V_JE6s4K3f4zYNHu333Ak7tTV7mOGbmWHmmNMrq8Pes,1927
gmlst/readers/sample.py,sha256=d-tyvb_J_94Y7CHk0Fex3oaygY6cqtF7FfTGQ-HdU8k,5155
gmlst/schemefree/__init__.py,sha256=i8uGZNVVrIGC1JkQw5uAWdl0KPbhgKidVP68sgIDFF8,1438
gmlst/schemefree/assembly_engine.py,sha256=MLgl554EZ553uT_pWEQDZ5noUX-RtmbOkEby18ROeZk,3228
gmlst/schemefree/cluster_engine.py,sha256=FIEhjfGt_H-82N2bsBH9VrTdSoa2GTxI1-Rm6ZHSRdw,4170
gmlst/schemefree/config.py,sha256=46RjHKaShvIo1rK11sFXsMeHoB9OO7Rr8ZNB-VQC1uo,6186
gmlst/schemefree/gene_predictor.py,sha256=gZpVoHctgrAcb608B42VVcwbrXn5XfboBAM-lWbepOg,10551
gmlst/schemefree/hasher.py,sha256=OuWu9XALfxI80r2lnE6jGRt7wApTxwnRmFPrbWzVIm4,16298
gmlst/schemefree/io_handler.py,sha256=Q6Xr-nCD5tRUFop3Rcn4yQ628r7FvzAdM7hmFmwe8-s,2749
gmlst/schemefree/typing_engine.py,sha256=jkIrrJssYPtiGeLnw2CNkH-ElcQeUJsop4XV9zOdIO4,15679
gmlst/visual/__init__.py,sha256=4ghLvUIVvFriy2GdbXy-9p7ZNioUb4AKIojXpfF5a6A,186
gmlst/visual/app.py,sha256=-uM90A-gTE2rBRO1kNiMxFmIeTl081sm_g6OGLjuqWA,20885
gmlst/visual/cli.py,sha256=EVJv5QiWrQloK65C3SPgrg5VKzM5g-Sw44X1YjP59q8,30920
gmlst/visual/mst.py,sha256=SElfY6xhTy902BZYDqDF4Wj5rDv913gmoRPk81jen8c,10831
gmlst/visual/mst_edmonds.py,sha256=cSpmjKgi7ZHm0w9D-j63dTXfrDt8nfE65hl5If3Y0xk,17200
gmlst/visual/mst_grapetree.py,sha256=yaDCh1zz7zmPIHpA1nMOtY_K6Qyq-V5N5W6wSw6hGWM,16338
gmlst/visual/mst_shared.py,sha256=ZsLwIvLllXgK1AeitMCwfdUzMg9L8xuPFYZD5rjAVH4,16536
gmlst/web/README.md,sha256=2X4kSLqqCEXgL1rskUk37ahIj0yTA9drcEau0WJONUE,866
gmlst/web/frontend/index.html,sha256=In2dDdCpsXir5qzGyNK_1ey9edzVUazDipA01qKwg4U,383
gmlst/web/frontend/package-lock.json,sha256=bQCBi6snq_T35dtHw-l_uDxKAnEYWGwrg4ZX_e16PSU,53351
gmlst/web/frontend/package.json,sha256=hvwCRvkySxNhtI1O1h_hn-rTUUYRwMWNPHpRQ3XDH1k,414
gmlst/web/frontend/vite.config.js,sha256=0ErjCo2mcoNlD8CvqAkx53UlK5YHvYu0m4pCOsRKOzM,724
gmlst/web/frontend/src/App.vue,sha256=yd06EOf_MoTfRi-YbGqgJ5a6TdslysqtVv1uaDnkOZ8,153810
gmlst/web/frontend/src/main.js,sha256=Qaecy31EDctV3TooxqYgVsWbTod9n8vhfJzV1_u-LBQ,115
gmlst/web/frontend/src/style.css,sha256=e2-TPnpn0lNt9J_knzkLLxVefm6OIQfIK6MidILK_OE,22474
gmlst/web/frontend/src/visualSelection.js,sha256=WkH2IPG0mOQaZpqdAL7ClYrgAUg5Gxy8Wdnp-NVh6gg,7747
gmlst/web/frontend/src/visualSelection.test.js,sha256=ZFzfiAP6QbNiiMpJUWBTJIOOWl53lDrfThCgAZCsRhY,9218
gmlst/web/static/visual/dist/app.css,sha256=NtXBDFZIpNHcV6FS5TEVk0NC3dja3VPMvoT8-abT0Ik,17830
gmlst/web/static/visual/dist/app.js,sha256=WP9brrSMGYcxcxD43CGX0NIeLSFLCNEfsPsen9snj6I,235846
gmlst/web/static/visual/dist/index.html,sha256=Ac7iFjkXSOI0271u_QKRTEEhOMOOZXW-p8fjNJiJmzo,445
gmlst/web/templates/visual/index.html,sha256=xFl34_XwfxYIUnGn1-0cxSNltvXlppYNtC3PjqtZLjM,428
gmlst-0.1.0.dist-info/METADATA,sha256=3CFO761rbGlomqOuS_OMr20e6y_4SwTP4KIFIhb2Lf8,14070
gmlst-0.1.0.dist-info/WHEEL,sha256=QccIxa26bgl1E6uMy58deGWi-0aeIkkangHcxk2kWfw,87
gmlst-0.1.0.dist-info/entry_points.txt,sha256=jEb2YRviPnQS1EVJKi-mUAD-aSVYHnjQchrHVyCHDC4,41
gmlst-0.1.0.dist-info/licenses/LICENSE,sha256=b3oQakEXUwz_LsaUYz-NgudsWfX57Pp7lgOx6I6iKuo,1075
gmlst-0.1.0.dist-info/RECORD,,
