.gitattributes
.gitignore
.readthedocs.yaml
CITATION.cff
CODE_OF_CONDUCT.md
LICENSE.md
README.md
pyproject.toml
tox.ini
uv.lock
.github/workflows/python-publish.yml
.github/workflows/tests.yml
.napari-hub/DESCRIPTION.md
.napari-hub/config.yml
docs/Makefile
docs/conf.py
docs/index.rst
docs/make.bat
docs/api/index.rst
docs/api/optim_backend.rst
docs/api/optim_manager.rst
docs/api/optim_pipeline.rst
docs/api/presets.rst
docs/api/tracking.rst
docs/api/utils.rst
docs/napari_plugin/index.rst
example_data/z_tracking_example.tif
example_data/z_tracking_not_cleaned.tif
example_data/2d_time/2d_time_gt.tif
example_data/2d_time/2d_time_raw.tif
example_scripts/benchmark_ctc.py
example_scripts/error_analysis.py
example_scripts/example.py
example_scripts/gt_filtering.py
example_scripts/optim_launch.py
example_scripts/plot_ctc_results.py
example_scripts/prepare_wing_disc.py
src/__init__.py
src/napari_easytrack/__init__.py
src/napari_easytrack/geff_export.py
src/napari_easytrack/napari.yaml
src/napari_easytrack/presets.py
src/napari_easytrack/utils.py
src/napari_easytrack.egg-info/PKG-INFO
src/napari_easytrack.egg-info/SOURCES.txt
src/napari_easytrack.egg-info/dependency_links.txt
src/napari_easytrack.egg-info/entry_points.txt
src/napari_easytrack.egg-info/requires.txt
src/napari_easytrack.egg-info/top_level.txt
src/napari_easytrack/analysis/__init__.py
src/napari_easytrack/analysis/optim_backend.py
src/napari_easytrack/analysis/optim_manager.py
src/napari_easytrack/analysis/optim_pipeline.py
src/napari_easytrack/analysis/tracking.py
src/napari_easytrack/configs/WD1.1_param_means.json
src/napari_easytrack/configs/WD3.2_param_means.json
src/napari_easytrack/configs/cell_config.json
src/napari_easytrack/configs/disc2_config.json
src/napari_easytrack/configs/optimized_config_3d.json
src/napari_easytrack/widgets/__init__.py
src/napari_easytrack/widgets/optim_widget.py
src/napari_easytrack/widgets/widget.py
tests/__init__.py
tests/conftest.py
tests/test_geff_export.py
tests/test_optim_backend.py
tests/test_optim_manager.py
tests/test_optim_pipeline.py
tests/test_optim_widget.py
tests/test_presets.py
tests/test_tracking.py
tests/test_utils.py
tests/test_widget.py