Metadata-Version: 2.2
Name: Pynomic
Version: 0.0.1
Summary: Python library for data extraction from drone orthomosaics in plant breeding trials
Author-email: "Fiore Juan M." <fiorejuanm@mi.unc.edu.ar>
License: The MIT License
Project-URL: Homepage, https://github.com/JMFiore/Pynomic
Keywords: UAV,RGB,Multispectral,Pipeline
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Education
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: attrs
Requires-Dist: numpy
Requires-Dist: python-dateutil
Requires-Dist: seaborn
Requires-Dist: pandas
Requires-Dist: rasterio
Requires-Dist: matplotlib
Requires-Dist: shapely
Requires-Dist: pillow
Requires-Dist: zarr==2.18.2
Requires-Dist: scikit-learn
Requires-Dist: opencv-python
Requires-Dist: pandas-geojson
Requires-Dist: scikit-image
Requires-Dist: geopandas
Requires-Dist: statsmodels

# Pynomic

![logo](https://raw.githubusercontent.com/JMFiore/Pynomic/master/docs/_static/pynomic_logo.svg)


![Tests](https://github.com/JMFiore/Pynomic/actions/workflows/testing.yml/badge.svg)
[![Documentation Status](https://readthedocs.org/projects/pynomic/badge/?version=latest)](https://pynomic.readthedocs.io/en/latest/?badge=latest)
[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
![Python 3.9+](https://img.shields.io/badge/python-3.9+-blue.svg)


*Pynomic* is a Python library designed to quickly and efficiently extract data from aerial images of plant breeding trials, offering a simple, automated, and trackable solution.

## Motivation
The use of drones in agriculture is beeing widely spread due to its versatility from plant treatmenta aplication, sowing, scouting crops, etc. In plant breeding it allows to capture large amounts of Phenomic data with less human effort.
This data needs to be processed in order to extract usefull information. Hence Pynomic the tool that to sovle this porblem. It combines librarys to get the best of them, making it able to fast extract the data, plot each treatment and it's evolution
through time, estimate the date of a event given a certain threshold, automaticaly calculate RGB and Multispectra vegetation indices while at the same time reducing the need for RAM. Storing only the relevant information. Thus reducing the computation resources.

## Requirements
You need Python 3.9+ to run Pynomic.

## Basic install
You can find Pynomic in PyPl. The standard installation.

    $ pip install Pynomic


## Developer Installation 
Clone this repo. Move to the file and execute:

    $ pip install e .
