DAY-EC activated.
DAY-EC activated.
Cloning into '/fsx/analysis_results/ubuntu/ccv20260529r27_complete_genomics_mgi_snv_concordance_dryrun/daylily-omics-analysis'...
Note: switching to '3d5e86c38f1a03a2a47cbad570d4ace5386bbec6'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

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Cloning repository...

Great success! Daylily repository cloned.
Repository: https://github.com/Daylily-Informatics/daylily-omics-analysis.git
Reference : 2.0.23
Location  : /fsx/analysis_results/ubuntu/ccv20260529r27_complete_genomics_mgi_snv_concordance_dryrun/daylily-omics-analysis

To get started:
  cd /fsx/analysis_results/ubuntu/ccv20260529r27_complete_genomics_mgi_snv_concordance_dryrun/daylily-omics-analysis
  # initialize and run the analysis repository per its documentation
/home/ubuntu/daylily-runs/ccv20260529r27_complete_genomics_mgi_snv_concordance_dryrun/launch.sh: line 636: warning: here-document at line 389 delimited by end-of-file (wanted `PYPYCOQC')
/home/ubuntu/daylily-runs/ccv20260529r27_complete_genomics_mgi_snv_concordance_dryrun/launch.sh: line 637: syntax error: unexpected end of file
