DAY-EC activated.
DAY-EC activated.
    wildcards: lane=L005
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L005 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 5 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L005/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L005.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L005/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L005/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L005/bclconvert.done

[Sat May 30 18:46:10 2026]
rule run_bclconvert_lane:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/SampleSheet.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L001.log
    jobid: 3
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.L001.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/fastq_list.csv; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok
    wildcards: lane=L001
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 1 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L001.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/bclconvert.done

[Sat May 30 18:46:10 2026]
rule run_bclconvert_lane:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/SampleSheet.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L003.log
    jobid: 5
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.L003.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/fastq_list.csv; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok
    wildcards: lane=L003
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 3 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L003.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/bclconvert.done

[Sat May 30 18:46:10 2026]
rule run_bclconvert_lane:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/SampleSheet.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L008.log
    jobid: 10
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.L008.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/fastq_list.csv; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok
    wildcards: lane=L008
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 8 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L008.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/bclconvert.done

[Sat May 30 18:46:10 2026]
rule run_bclconvert_lane:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/SampleSheet.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L006.log
    jobid: 8
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.L006.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/SampleSheet.csv; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok
    wildcards: lane=L006
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 6 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L006.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/bclconvert.done

[Sat May 30 18:46:10 2026]
rule run_bclconvert_lane:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/SampleSheet.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L002.log
    jobid: 4
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.L002.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/fastq_list.csv; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok
    wildcards: lane=L002
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 2 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L002.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/bclconvert.done

[Sat May 30 18:46:10 2026]
rule run_bclconvert_lane:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/SampleSheet.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L007.log
    jobid: 9
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.L007.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/bclconvert.done; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok
    wildcards: lane=L007
    threads: 192
    resources: mem_mb=180000, mem_mib=171662, disk_mb=1000, disk_mib=954, tmpdir=<TBD>, threads=192, time=5440, partition=i192mem, vcpu=192, distribution=block, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/dev/shm bash workflow/scripts/dyec_run_bclconvert_lane.sh docker://nfcore/bclconvert:4.0.3 /fsx/analysis_results/ubuntu/ccv20260530r55_illumina_bclconvert_dryrun/daylily-omics-analysis/config/run_dir_links/20260514_LH01106_0009_B23TVLGLT4 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv 7 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/SampleSheet.csv false false false 1 16 8 48 16 false true 10000 '{}' '{}' -f 192 results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.L007.log results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/fastq_list.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/Demultiplex_Stats.csv results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/bclconvert.done

[Sat May 30 18:46:10 2026]
localrule run_bclconvert:
    input: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L004/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L005/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L004/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L005/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L004/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L005/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L004/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L005/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/SampleSheet.csv
    output: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/fastqs/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/fastqs/Reports/Demultiplex_Stats.csv
    log: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/run_bclconvert.merge_lanes.log
    jobid: 2
    benchmark: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/benchmarks/run_bclconvert.merge_lanes.bench.tsv
    reason: Missing output files: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/fastqs/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/fastqs/Reports/fastq_list.csv; Input files updated by another job: results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L007/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L004/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L003/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L002/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L003/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L005/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L006/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L006/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L008/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L005/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L005/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L002/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/validated.ok, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L001/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L007/bclconvert.done, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/normalized.SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_reports/L004/SampleSheet.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/Demultiplex_Stats.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L001/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L004/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/lane_fastqs/L008/Reports/fastq_list.csv, results/runs/20260514_LH01106_0009_B23TVL--output truncated--
