LICENSE
README.md
pyproject.toml
simutools/__init__.py
simutools.egg-info/PKG-INFO
simutools.egg-info/SOURCES.txt
simutools.egg-info/dependency_links.txt
simutools.egg-info/requires.txt
simutools.egg-info/top_level.txt
simutools/coarse_grained/__init__.py
simutools/coarse_grained/angle.py
simutools/coarse_grained/bead.py
simutools/coarse_grained/bond.py
simutools/coarse_grained/dihedral.py
simutools/coarse_grained/mapping.py
simutools/coarse_grained/martini3bible.py
simutools/forcefields/__init__.py
simutools/forcefields/amber.py
simutools/forcefields/base.py
simutools/jobmanager/__init__.py
simutools/jobmanager/slurm.py
simutools/simulator/__init__.py
simutools/simulator/func.py
simutools/simulator/mol3d.py
simutools/simulator/program/__init__.py
simutools/simulator/program/base.py
simutools/simulator/program/gaussian.py
simutools/simulator/program/gromacs.py
simutools/simulator/program/packmol.py
simutools/simulator/program/plumed.py
simutools/template/__init__.py
simutools/template/amber/chloride.gro
simutools/template/amber/chloride.top
simutools/template/amber/sodium.gro
simutools/template/amber/sodium.top
simutools/template/amber/tip3p.gro
simutools/template/amber/tip3p.top
simutools/template/amber/tleap.in
simutools/template/gromacs/LJ.itp
simutools/template/gromacs/LJ1.gro
simutools/template/gromacs/LJ2.gro
simutools/template/gromacs/LJ3.gro
simutools/template/gromacs/box_martini3_water.gro
simutools/template/gromacs/chloride.gro
simutools/template/gromacs/chloride.top
simutools/template/gromacs/martini3_chloride.gro
simutools/template/gromacs/martini3_dmso.gro
simutools/template/gromacs/martini3_sodium.gro
simutools/template/gromacs/martini_v3.0.0.itp
simutools/template/gromacs/martini_v3.0.0_ions_v1.itp
simutools/template/gromacs/martini_v3.0.0_solvents_v1.itp
simutools/template/gromacs/single_martini3_water.gro
simutools/template/gromacs/sodium.gro
simutools/template/gromacs/sodium.top
simutools/template/gromacs/swarm_cg_equi.mdp
simutools/template/gromacs/swarm_cg_md.mdp
simutools/template/gromacs/swarm_cg_mini.mdp
simutools/template/gromacs/t_CG_em.mdp
simutools/template/gromacs/t_em.mdp
simutools/template/gromacs/t_em_vacuum.mdp
simutools/template/gromacs/t_fep.mdp
simutools/template/gromacs/t_npt.mdp
simutools/template/gromacs/t_npt_ppm.mdp
simutools/template/gromacs/t_nvt.mdp
simutools/template/gromacs/t_nvt_anneal.mdp
simutools/template/gromacs/t_nvt_slab.mdp
simutools/template/gromacs/t_nvt_vacuum.mdp
simutools/template/gromacs/tip3p.gro
simutools/template/gromacs/tip3p.top
simutools/template/plumed/bimolecule.dat
simutools/template/plumed/bimolecule_eq.dat
simutools/utils/__init__.py
simutools/utils/fitting.py
simutools/utils/formula.py
simutools/utils/rdkit.py
simutools/utils/series.py
simutools/utils/utils.py