Metadata-Version: 2.4
Name: TALLSorts
Version: 0.3
Summary: TALLSorts is a T-cell acute lymphoblastic leukaemia (T-ALL) subtype classifier, taking gene expression counts and making predictions into 8 subtypes (for now).
Author: Allen Gu, Breon Schmidt
Maintainer: Oshlack Lab
License: MIT
Project-URL: Homepage, https://github.com/Oshlack/TAllSorts
Project-URL: Documentation, https://github.com/Oshlack/TAllSorts/wiki
Project-URL: Repository, https://github.com/Oshlack/TAllSorts
Project-URL: Issues, https://github.com/Oshlack/TAllSorts/issues
Project-URL: Publication, https://doi.org/10.1182/bloodadvances.2023010385
Keywords: bioinformatics,leukaemia,T-ALL,classifier,gene-expression,RNA-seq,subtype
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Healthcare Industry
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy==1.26.4
Requires-Dist: pandas==2.2.3
Requires-Dist: scikit-learn==1.3.2
Requires-Dist: scipy==1.11.4
Requires-Dist: joblib==1.4.2
Requires-Dist: plotly==5.11.0
Requires-Dist: conorm==1.2.0
Provides-Extra: symbol
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Provides-Extra: images
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Provides-Extra: all
Requires-Dist: pyensembl==2.2.9; extra == "all"
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Dynamic: license-file

# TALLSorts T-ALL subtype classifier

TALLSorts is a T-cell acute lymphoblastic leukaemia (T-ALL) subtype classifier, taking gene expression counts and making predictions into 8 subtypes. It is built on our previous work on <a href="https://github.com/Oshlack/ALLSorts" target="_blank">ALLSorts</a>, a B-ALL subtype classifier.

Please refer to the <a href="https://github.com/Oshlack/TALLSorts/wiki" target="_blank">wiki</a> for further information & documentation.

If you have any problems, let us know via <a href="https://github.com/Oshlack/TALLSorts/issues">issues</a> and we will get back to you promptly.

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TALLSorts is published in <a href="https://doi.org/10.1182/bloodadvances.2023010385">_Blood Advances_</a>!
