numpy>=1.21
scipy>=1.8
biopython>=1.79
scikit-image>=0.19
matplotlib>=3.5
trimesh>=3.10
networkx>=2.8
pillow>=9.0
rtree>=1.0
shapely>=1.8
libigl<2.7,>=2.6

[all]
psutil>=5.9
tqdm>=4.60
MDAnalysis>=2.0
prolif>=2.0
rdkit>=2023.9
meshio>=5.0

[benchmark]
psutil>=5.9
tqdm>=4.60

[dev]
build>=1.0
pytest>=8.0
pytest-cov>=5.0
ruff>=0.4
twine>=5.0

[interactions]
MDAnalysis>=2.0
prolif>=2.0
rdkit>=2023.9

[meshio]
meshio>=5.0
