LICENSE
README.md
pyproject.toml
csi_analysis/__init__.py
csi_analysis.egg-info/PKG-INFO
csi_analysis.egg-info/SOURCES.txt
csi_analysis.egg-info/dependency_links.txt
csi_analysis.egg-info/requires.txt
csi_analysis.egg-info/top_level.txt
csi_analysis/modules/__init__.py
csi_analysis/modules/cellpose_segmenter.py
csi_analysis/modules/classic_segmenter.py
csi_analysis/modules/ocular_frameinfo_generator.py
csi_analysis/modules/ocular_report_clusterer.py
csi_analysis/modules/ocular_report_generator.py
csi_analysis/modules/tophat_preprocessor.py
csi_analysis/pipelines/__init__.py
csi_analysis/pipelines/scan_pipeline.py
tests/test_scan_pipeline.py