biopython>=1.83
datasets>=4.0.0
lightning>=2.5.3
numpy>=2.0.2
pandas>=2.0.0
scikit-base
torch>=2.5.1
scikit-learn<1.8.0,>=1.3.0
skorch
imblearn
requests

[dev]
ruff>=0.12.0
pytest>=8.0.0
pre-commit
