LICENSE
MANIFEST.in
README.md
pyproject.toml
examples/generate_sample_data.py
examples/oncology_trial.csv
examples/quickstart.py
examples/tutorial_01_basic_workflow.py
examples/tutorial_02_optimizing_criteria.py
examples/tutorial_03_interpreting_results.py
examples/tutorial_04_complete_case_study.py
examples/results/biomarker_rankings.csv
examples/results/optimal_cutoffs.csv
examples/tutorial_01_results/biomarker_rankings.csv
examples/tutorial_01_results/optimal_cutoffs.csv
examples/tutorial_04_board_presentation/biomarker_rankings.csv
examples/tutorial_04_board_presentation/optimal_cutoffs.csv
src/trialix/__init__.py
src/trialix.egg-info/PKG-INFO
src/trialix.egg-info/SOURCES.txt
src/trialix.egg-info/dependency_links.txt
src/trialix.egg-info/entry_points.txt
src/trialix.egg-info/requires.txt
src/trialix.egg-info/top_level.txt
src/trialix/api/__init__.py
src/trialix/api/enrichment.py
src/trialix/cli/__init__.py
src/trialix/cli/commands.py
src/trialix/core/__init__.py
src/trialix/core/biomarker_analysis.py
src/trialix/core/criteria_generator.py
src/trialix/core/cutoff_optimizer.py
src/trialix/core/data_loader.py
src/trialix/utils/__init__.py
src/trialix/utils/constants.py
src/trialix/utils/formatters.py
src/trialix/utils/validators.py
src/trialix/visualizations/__init__.py
src/trialix/visualizations/biomarker_plots.py
src/trialix/visualizations/enrichment_plots.py
src/trialix/visualizations/roc_plots.py
tests/test_basic.py