DAY-EC activated.
DAY-EC activated.
=== status ===
{
  "command": "bin/day_run produce_bclconvert_fastqs_and_metrics -p -j 20 -k --config run_context_file=config/runs.tsv samples_table=.test_data/data/bclconvert/samples.tsv units_table=.test_data/data/bclconvert/units.tsv",
  "completed_at": "2026-05-30T03:12:26Z",
  "exit_code": 1,
  "repo_path": "/fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis",
  "session_name": "ccv20260529r11_illumina_bclconvert",
  "started_at": "2026-05-30T03:11:49Z"
}
=== repo ===
/fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis
=== latest snakemake logs ===
1780110745.0000000000 .snakemake/log/2026-05-30T031211.555591.snakemake.log
1780110748.0000000000 .snakemake/log/2026-05-30T031227.116686.snakemake.log
=== latest log path: .snakemake/log/2026-05-30T031227.116686.snakemake.log ===
1:WorkflowError in file /fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/workflow/rules/common.smk, line 439:
=== latest log tail ===
WorkflowError in file /fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/workflow/rules/common.smk, line 439:
The units table at /fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/config/units.tsv has headers but no data rows.
  File "/fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/workflow/Snakefile", line 66, in <module>
  File "/fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/workflow/rules/global_common.smk", line 151, in <module>
  File "/fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/workflow/rules/common.smk", line 1089, in <module>
  File "/fsx/analysis_results/ubuntu/ccv20260529r11_illumina_bclconvert/daylily-omics-analysis/workflow/rules/common.smk", line 439, in _load_units_table
=== rule logs with errors ===
results/runs/20260514_LH01106_0009_B23TVLGLT4/bclconvert/logs/bclconvert_validate_inputs.log:2:ERROR: Sample_ID HG001-a at line 21 is not present in samples.tsv
