LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
rnalib/__init__.py
rnalib/constants.py
rnalib/interfaces.py
rnalib/rnalib
rnalib/testdata.py
rnalib/tools.py
rnalib/utils.py
rnalib.egg-info/PKG-INFO
rnalib.egg-info/SOURCES.txt
rnalib.egg-info/dependency_links.txt
rnalib.egg-info/requires.txt
rnalib.egg-info/top_level.txt
rnalib/static_test_files/ACTB+SOX2.fa.gz
rnalib/static_test_files/FAT61995_a1291c8f_5.fast5
rnalib/static_test_files/GSM3185042.Actb.bam
rnalib/static_test_files/GSM3185043.pe_example.bam
rnalib/static_test_files/GSM3185046.pe_example.bam
rnalib/static_test_files/GSM3185046.pe_example.vcf.gz
rnalib/static_test_files/Test01_L001_R1_001.top20.fastq
rnalib/static_test_files/Test01_L001_R2_001.top20.fastq
rnalib/static_test_files/dmel_randomvalues.bedgraph.gz
rnalib/static_test_files/example.bedgraph.gz
rnalib/static_test_files/gencode_44.ACTB+SOX2.bed.gz
rnalib/static_test_files/generic.gff3.gz
rnalib/static_test_files/hgnc_complete_set.head.txt.gz
rnalib/static_test_files/rogue_read.bam
rnalib/static_test_files/slamseq_example_0.cr0.05.STAR.bam
rnalib/static_test_files/slamseq_example_10.cr0.05.STAR.bam
rnalib/static_test_files/slamseq_example_15.cr0.05.STAR.bam
rnalib/static_test_files/slamseq_example_20.cr0.05.STAR.bam
rnalib/static_test_files/slamseq_example_25.cr0.05.STAR.bam
rnalib/static_test_files/slamseq_example_5.cr0.05.STAR.bam
rnalib/static_test_files/slamseq_example_featureCounts_all_reads.txt
rnalib/static_test_files/slamseq_example_featureCounts_tc_reads.txt
rnalib/static_test_files/slamseq_example_mm10.gff3.gz
rnalib/static_test_files/small.ACTB+SOX2.bam
rnalib/static_test_files/small.ACTB+SOX2.clean.MD.bam
rnalib/static_test_files/small_example.bam
rnalib/static_test_files/small_remapped.bam
rnalib/static_test_files/small_remapped.r1.fq.gz
rnalib/static_test_files/small_remapped.r2.fq.gz
rnalib/static_test_files/test.bed.gz
rnalib/static_test_files/test.bedgraph.gz
rnalib/static_test_files/test.fq.gz
rnalib/static_test_files/test.vcf.gz
rnalib/static_test_files/test_bed12.bed.gz
rnalib/static_test_files/test_snps.vcf.gz
rnalib/static_test_files/wormbase_cele_WS293.head.gff3.gz
tests/test_apis.py
tests/test_gi.py
tests/test_iterators.py
tests/test_transcriptome.py
tests/test_utils.py