LICENSE
NOTICE
README.md
pyproject.toml
src/perseus/__init__.py
src/perseus/cli.py
src/perseus/commands/__init__.py
src/perseus/commands/evaluate.py
src/perseus/commands/extract.py
src/perseus/commands/extract_train_data.py
src/perseus/commands/filter.py
src/perseus/commands/train.py
src/perseus/data/__init__.py
src/perseus/data/collate.py
src/perseus/data/dataset.py
src/perseus/data/sampler.py
src/perseus/features/__init__.py
src/perseus/features/features.py
src/perseus/features/init.py
src/perseus/features/processing.py
src/perseus/losses/__init__.py
src/perseus/losses/bce.py
src/perseus/losses/compute.py
src/perseus/losses/focal.py
src/perseus/models/__init__.py
src/perseus/models/cnn.py
src/perseus/models/initialize.py
src/perseus/models/layers.py
src/perseus/models/restcn.py
src/perseus/models/trained_weights.pt
src/perseus/trainer/__init__.py
src/perseus/trainer/calibration.py
src/perseus/trainer/evaluate.py
src/perseus/trainer/metrics.py
src/perseus/trainer/regularization.py
src/perseus/trainer/train.py
src/perseus/trainer/utils.py
src/perseus/utils/__init__.py
src/perseus/utils/constants.py
src/perseus/utils/filter_utils.py
src/perseus/utils/globals.py
src/perseus/utils/io_utils.py
src/perseus/utils/targets.py
src/perseus/utils/tax_utils.py
src/perseus_metagenomics.egg-info/PKG-INFO
src/perseus_metagenomics.egg-info/SOURCES.txt
src/perseus_metagenomics.egg-info/dependency_links.txt
src/perseus_metagenomics.egg-info/entry_points.txt
src/perseus_metagenomics.egg-info/requires.txt
src/perseus_metagenomics.egg-info/top_level.txt