LICENSE
MANIFEST.in
README.md
environment.yml
pyproject.toml
src/parmmosahn/__init__.py
src/parmmosahn/analysis.py
src/parmmosahn/annotation.py
src/parmmosahn/cli.py
src/parmmosahn/constants.py
src/parmmosahn/curation.py
src/parmmosahn/models.py
src/parmmosahn/pangenome.py
src/parmmosahn/pipeline.py
src/parmmosahn/results.py
src/parmmosahn/utils.py
src/parmmosahn.egg-info/PKG-INFO
src/parmmosahn.egg-info/SOURCES.txt
src/parmmosahn.egg-info/dependency_links.txt
src/parmmosahn.egg-info/entry_points.txt
src/parmmosahn.egg-info/requires.txt
src/parmmosahn.egg-info/top_level.txt
src/parmmosahn/data/docker-compose.yml
src/parmmosahn/data/mnxr_to_rhea.tsv
src/parmmosahn/data/seed_rxn_to_bigg.tsv
src/parmmosahn/data/seed_to_bigg.tsv
src/parmmosahn/data/seed_to_rhea.tsv
tests/test_analysis.py
tests/test_annotation.py
tests/test_biological.py
tests/test_build_seed_rxn_to_bigg.py
tests/test_build_seed_to_bigg.py
tests/test_cli.py
tests/test_constants.py
tests/test_curation.py
tests/test_models.py
tests/test_pangenome.py
tests/test_pipeline.py
tests/test_results.py
tests/test_utils.py
tests/data/tiny_genome.gbff
tests/data/tiny_memote.json
tests/data/tiny_model.xml