LICENSE
README.md
pyproject.toml
csi_analysis/__init__.py
csi_analysis.egg-info/PKG-INFO
csi_analysis.egg-info/SOURCES.txt
csi_analysis.egg-info/dependency_links.txt
csi_analysis.egg-info/requires.txt
csi_analysis.egg-info/top_level.txt
csi_analysis/modules/__init__.py
csi_analysis/modules/cellpose_segmenter.py
csi_analysis/modules/channel_classifier.py
csi_analysis/modules/classic_segmenter.py
csi_analysis/modules/focus_quality_extractor.py
csi_analysis/modules/ocular_frameinfo_generator.py
csi_analysis/modules/ocular_report_clusterer.py
csi_analysis/modules/ocular_report_generator.py
csi_analysis/modules/threshold_filter.py
csi_analysis/modules/tophat_preprocessor.py
csi_analysis/pipelines/__init__.py
csi_analysis/pipelines/scan.py
csi_analysis/training/__init__.py
csi_analysis/training/channel_classifier/__init__.py
csi_analysis/training/channel_classifier/channel_classifier/__init__.py
csi_analysis/training/channel_classifier/channel_classifier/clean_data.py
csi_analysis/training/channel_classifier/channel_classifier/config.py
csi_analysis/training/channel_classifier/channel_classifier/dataset.py
csi_analysis/training/channel_classifier/channel_classifier/utils.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/__init__.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/eval.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/loader.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/loss.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/metrics.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/model.py
csi_analysis/training/channel_classifier/channel_classifier/modeling/train.py
tests/test_scan_pipeline.py