LICENSE
README.md
pyproject.toml
src/stangene/__init__.py
src/stangene/__main__.py
src/stangene/_logging.py
src/stangene/biotype.py
src/stangene/classify.py
src/stangene/harmonize.py
src/stangene/hb.py
src/stangene/infer.py
src/stangene/io.py
src/stangene/merge.py
src/stangene/mito.py
src/stangene/references.py
src/stangene/report.py
src/stangene/species.py
src/stangene.egg-info/PKG-INFO
src/stangene.egg-info/SOURCES.txt
src/stangene.egg-info/dependency_links.txt
src/stangene.egg-info/entry_points.txt
src/stangene.egg-info/requires.txt
src/stangene.egg-info/top_level.txt
src/stangene/data/refs/c_elegans/build_metadata.json
src/stangene/data/refs/c_elegans/gene_table.parquet
src/stangene/data/refs/cynomolgus/build_metadata.json
src/stangene/data/refs/cynomolgus/gene_table.parquet
src/stangene/data/refs/fruit_fly/build_metadata.json
src/stangene/data/refs/fruit_fly/gene_table.parquet
src/stangene/data/refs/human/build_metadata.json
src/stangene/data/refs/human/gene_table.parquet
src/stangene/data/refs/marmoset/build_metadata.json
src/stangene/data/refs/marmoset/gene_table.parquet
src/stangene/data/refs/mouse/build_metadata.json
src/stangene/data/refs/mouse/gene_table.parquet
src/stangene/data/refs/mouse_lemur/build_metadata.json
src/stangene/data/refs/mouse_lemur/gene_table.parquet
src/stangene/data/refs/rat/build_metadata.json
src/stangene/data/refs/rat/gene_table.parquet
src/stangene/data/refs/rhesus/build_metadata.json
src/stangene/data/refs/rhesus/gene_table.parquet
src/stangene/data/refs/zebrafish/build_metadata.json
src/stangene/data/refs/zebrafish/gene_table.parquet
tests/test_biotype.py
tests/test_classify.py
tests/test_edge_cases.py
tests/test_harmonize.py
tests/test_harmonize_anndata.py
tests/test_hb_mask.py
tests/test_infer_species.py
tests/test_io.py
tests/test_markdown_report.py
tests/test_merge.py
tests/test_mito_mask.py
tests/test_pbmc3k.py
tests/test_references.py
tests/test_report.py
tests/test_resolve_species.py
tests/test_run.py
tests/test_species.py