LICENSE
README.md
pyproject.toml
seqseg/__init__.py
seqseg/cent2path.py
seqseg/centpath.py
seqseg/seqseg.py
seqseg/seqseg_plus.py
seqseg.egg-info/PKG-INFO
seqseg.egg-info/SOURCES.txt
seqseg.egg-info/dependency_links.txt
seqseg.egg-info/entry_points.txt
seqseg.egg-info/requires.txt
seqseg.egg-info/top_level.txt
seqseg/analysis/compute_metrics.py
seqseg/analysis/dataset_size_study.py
seqseg/analysis/eval_dice_assuming_cent.py
seqseg/analysis/post_process_results.py
seqseg/analysis/plotting/plot_error_centerline.py
seqseg/analysis/plotting/plot_functions.py
seqseg/analysis/plotting/plot_results.py
seqseg/analysis/plotting/plot_results_time.py
seqseg/analysis/plotting/plot_scaling.py
seqseg/analysis/plotting/plot_tracing_results.py
seqseg/analysis/plotting/plot_training.py
seqseg/analysis/plotting/results.py
seqseg/analysis/vis_data/visualize_vtp.py
seqseg/analysis/vis_data/visualize_vtp_together.py
seqseg/config/aorta_tutorial.yaml
seqseg/config/global.yaml
seqseg/config/global_aorta.yaml
seqseg/config/global_cereb.yaml
seqseg/config/global_coro.yaml
seqseg/config/global_debug.yaml
seqseg/config/global_default.yaml
seqseg/config/global_pulm.yaml
seqseg/config/global_seg.yaml
seqseg/config/global_test.yaml
seqseg/modules/__init__.py
seqseg/modules/assembly.py
seqseg/modules/capping.py
seqseg/modules/centerline.py
seqseg/modules/datasets.py
seqseg/modules/evaluation.py
seqseg/modules/initialization.py
seqseg/modules/local_assembly.py
seqseg/modules/nnunet.py
seqseg/modules/params.py
seqseg/modules/prediction.py
seqseg/modules/sitk_functions.py
seqseg/modules/sweep.py
seqseg/modules/tracing.py
seqseg/modules/tracing_functions.py
seqseg/modules/vmtk_functions.py
seqseg/modules/vtk_functions.py
seqseg/parallel/old_auto_centerline.py
seqseg/parallel/parallel_auto_centerline.py
seqseg/parallel/parallel_auto_centerline2.py
seqseg/parallel/parallel_auto_centerline3.py
seqseg/parallel/parallel_auto_centerline4.py
seqseg/tests/test_nnunet2.py
seqseg/tests/test_segmentation.py
seqseg/tests/test_vtk.py