anndata
boltons
braceexpand
crick>=0.0.4
google-cloud-storage
jsonargparse[signatures]==4.27.7
lightning<=2.5.2,>=2.2.0
numpy<=1.26.4
pyro-ppl>=1.9.1
pytest
scikit-misc==0.5.1
torch>=2.2.0
transformers

[dev]
cellarium-ml[docs,lint,mypy,test]

[docs]
nbsphinx
Pillow
seaborn>=0.13.0
sphinx
sphinx_rtd_theme
sphinx-copybutton

[lint]
ruff

[mypy]
mypy
types-PyYAML

[test]
pytest-xdist
scanpy
tenacity
tensorboard
torchvision
